Moc08g40640 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g40640
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	F-box protein SKIP1-like
Location	chr8: 31201191 .. 31202701 (-)
RNA-Seq Expression	Moc08g40640
Synteny	Moc08g40640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGATCCGTCGGAATCAGCGTCGCCGGCGTGGGCCGAGCTGACGCACGAGTGCCTGACCAACATCGTGTCGCGGCTGAGCGTGGAGCAGCGGTGGCGCGGCCCCATGCTCGTCTGCAAGCTCTGGTTCCGCGCCGCCACTTACTCCTCTCTCTTCTCCGAGTTCGACCTCGAACCCCGATTCGACTCGGCGCCCACCGAGTCACCGGCCTGGTGGTCGCCCGAGTTCCAGACCAAAATCGATTCCATGCTCCGATCGGTCCTCGATTGGAGCCATGGATCTCTCTCCCTTATTCGGATCAGACACTGCTCCGATCTCTCCCTTCATCTCGTCCCTCAAAGGTAATTAATTTTTAATTCTATTATAATTCTCTTATCTATTCTTTCTTTTCACTCAGGAAACACAGTTTTTTATATAGCTTGTGAATTTTGATTTGTGATAGTTTTTGATCTATTAGATCTGTAATCGCAATTTACAGTATTCTATACTATCAAAATCATGTCTTCTAAACAATAATTTGTTGAAAATTGTGTCTTTCCTCTCTTCTAGACATGATTTACTTGTAAAACTACCATACTTTTGTTGTTACTATTCGAATTTTCCTACCTTTCTAATCTTTCTAGACGTAATTATATTAAAAAAAAAGTTTCAAAAGTAGGTTCACATAACAAATTCAATGAAATTGTTATGAGAATGATGGGGCTATTTTGATAGTTTTGAAATGTGTTTGATTGTAAATCTTGTATGAACTTTTAGCCCTTCATATGGGTCTGAGTATTACATACTCTAATTTGATTCAGTGGTTCAAAGGGAACTTGGTTCCCTCTGGTTTAGCTATTATTTTGTGTCCTCGATCTTTGCATCTATTTGGTGGGATTAGTTGAGGTGTGTGTAAACGAGTTTGATCGCTCACAAAAGGGAAATTGATGGATTTTAGGTGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAATGTTACAGATAAATCAATGGCTAAGATTGCTCTTGGTTGCCAAAAGCTCCGGGAAGTCGACATCAGCTACTGTTATGAAATCTCCCACGAATCTTTGGCGTTAATCGGCAGGCATTGTCCAAATATAAAGACTCTAAAACGGAACTTTTTCAACACTCTAGATCCTTCCCAACACACGGGAATTGTCCCCGAAGATTATCTAAATGCCTGCCCTCAAGATGTGGATTCAGAAGCTGCAGCTATTGCAAAGTTCATGCCCAACTTGGAGCACCTTGAACTCTGTTTCTCTAAACTAACAGCTAAAGCCCTTAGTTTGATCTGTGAAGGATGTCCAAACCTCAAGTACTTGGATCTGTTTGGGTGTGTGAACTTGACAAGCCGCAATATAGCGAATGCTACTACAAGTCTGGAGAATTTGGAGATTAGGAAACCAAATTTCTATATACCGAGGTCGGTCTTTCACACAGAGAGGTATGGTCATTGGAGGCTGTATGACGAGAGGTTCCAAACGGATGTTTTCCGAATTTGA

mRNA sequence

ATGACAGATCCGTCGGAATCAGCGTCGCCGGCGTGGGCCGAGCTGACGCACGAGTGCCTGACCAACATCGTGTCGCGGCTGAGCGTGGAGCAGCGGTGGCGCGGCCCCATGCTCGTCTGCAAGCTCTGGTTCCGCGCCGCCACTTACTCCTCTCTCTTCTCCGAGTTCGACCTCGAACCCCGATTCGACTCGGCGCCCACCGAGTCACCGGCCTGGTGGTCGCCCGAGTTCCAGACCAAAATCGATTCCATGCTCCGATCGGTCCTCGATTGGAGCCATGGATCTCTCTCCCTTATTCGGATCAGACACTGCTCCGATCTCTCCCTTCATCTCGTCCCTCAAAGGTGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAATGTTACAGATAAATCAATGGCTAAGATTGCTCTTGGTTGCCAAAAGCTCCGGGAAGTCGACATCAGCTACTGTTATGAAATCTCCCACGAATCTTTGGCGTTAATCGGCAGGCATTGTCCAAATATAAAGACTCTAAAACGGAACTTTTTCAACACTCTAGATCCTTCCCAACACACGGGAATTGTCCCCGAAGATTATCTAAATGCCTGCCCTCAAGATGTGGATTCAGAAGCTGCAGCTATTGCAAAGTTCATGCCCAACTTGGAGCACCTTGAACTCTGTTTCTCTAAACTAACAGCTAAAGCCCTTAGTTTGATCTGTGAAGGATGTCCAAACCTCAAGTACTTGGATCTGTTTGGGTGTGTGAACTTGACAAGCCGCAATATAGCGAATGCTACTACAAGTCTGGAGAATTTGGAGATTAGGAAACCAAATTTCTATATACCGAGGTCGGTCTTTCACACAGAGAGGTATGGTCATTGGAGGCTGTATGACGAGAGGTTCCAAACGGATGTTTTCCGAATTTGA

Coding sequence (CDS)

ATGACAGATCCGTCGGAATCAGCGTCGCCGGCGTGGGCCGAGCTGACGCACGAGTGCCTGACCAACATCGTGTCGCGGCTGAGCGTGGAGCAGCGGTGGCGCGGCCCCATGCTCGTCTGCAAGCTCTGGTTCCGCGCCGCCACTTACTCCTCTCTCTTCTCCGAGTTCGACCTCGAACCCCGATTCGACTCGGCGCCCACCGAGTCACCGGCCTGGTGGTCGCCCGAGTTCCAGACCAAAATCGATTCCATGCTCCGATCGGTCCTCGATTGGAGCCATGGATCTCTCTCCCTTATTCGGATCAGACACTGCTCCGATCTCTCCCTTCATCTCGTCCCTCAAAGGTGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAATGTTACAGATAAATCAATGGCTAAGATTGCTCTTGGTTGCCAAAAGCTCCGGGAAGTCGACATCAGCTACTGTTATGAAATCTCCCACGAATCTTTGGCGTTAATCGGCAGGCATTGTCCAAATATAAAGACTCTAAAACGGAACTTTTTCAACACTCTAGATCCTTCCCAACACACGGGAATTGTCCCCGAAGATTATCTAAATGCCTGCCCTCAAGATGTGGATTCAGAAGCTGCAGCTATTGCAAAGTTCATGCCCAACTTGGAGCACCTTGAACTCTGTTTCTCTAAACTAACAGCTAAAGCCCTTAGTTTGATCTGTGAAGGATGTCCAAACCTCAAGTACTTGGATCTGTTTGGGTGTGTGAACTTGACAAGCCGCAATATAGCGAATGCTACTACAAGTCTGGAGAATTTGGAGATTAGGAAACCAAATTTCTATATACCGAGGTCGGTCTTTCACACAGAGAGGTATGGTCATTGGAGGCTGTATGACGAGAGGTTCCAAACGGATGTTTTCCGAATTTGA

Protein sequence

MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRNIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI

Homology

[Close]

BLAST of Moc08g40640 vs. NCBI nr
Match: XP_022158176.1 (F-box protein SKIP1-like [Momordica charantia])

HSP 1 Score: 636.0 bits (1639), Expect = 1.7e-178
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEP 60
           MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEP
Sbjct: 1   MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEP 60

Query: 61  RFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLE 120
           RFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLE
Sbjct: 61  RFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLE 120

Query: 121 VLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFN 180
           VLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFN
Sbjct: 121 VLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFN 180

Query: 181 TLDPSQHTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCP 240
           TLDPSQHTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCP
Sbjct: 181 TLDPSQHTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCP 240

Query: 241 NLKYLDLFGCVNLTSRNIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD 300
           NLKYLDLFGCVNLTSRNIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD
Sbjct: 241 NLKYLDLFGCVNLTSRNIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD 300

Query: 301 VFRI 305
           VFRI
Sbjct: 301 VFRI 304

[Close]

BLAST of Moc08g40640 vs. NCBI nr
Match: KAG6599142.1 (F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030085.1 F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 542.3 bits (1396), Expect = 2.6e-150
Identity = 255/297 (85.86%), Postives = 275/297 (92.59%), Query Frame = 0


Query: 8   ASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEPRFDSAPT 67
           A P+WAELT ECLTNI SRL++EQRWRGPMLVCKLW RAAT SSLFS FDLEPRFDS PT
Sbjct: 2   AEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPT 61

Query: 68  ESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKSC 127
           ESPAWWSP+F+ KIDSMLRS + WS GSLSLIRIRHCSD SL LV Q CPNLEVLSIKSC
Sbjct: 62  ESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQLVAQGCPNLEVLSIKSC 121

Query: 128 PNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQH 187
            NVTD+SMAKIALGCQKL+EVDISYC+EIS+ SL+LIG+HCPNIKTLKRNFFNTLDPSQ 
Sbjct: 122 ANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQ 181

Query: 188 TGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDL 247
            GIVP+ YLNACPQDVDSEA AIAKFMPNLEHL+LCFSKL+AKAL+LIC+GCPNLKYLDL
Sbjct: 182 KGIVPDSYLNACPQDVDSEAVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDL 241

Query: 248 FGCVNLTSRNIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI 305
           FGCVNLTSR+I NAT+SLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD+FRI
Sbjct: 242 FGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 298

[Close]

BLAST of Moc08g40640 vs. NCBI nr
Match: XP_022946543.1 (F-box protein SKIP1-like [Cucurbita moschata])

HSP 1 Score: 541.2 bits (1393), Expect = 5.8e-150
Identity = 254/297 (85.52%), Postives = 275/297 (92.59%), Query Frame = 0


Query: 8   ASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEPRFDSAPT 67
           A P+WAELT ECLTNI SRL++EQRWRGPMLVCKLW RAAT SSLFS FDLEPRFDS PT
Sbjct: 2   AEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPT 61

Query: 68  ESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKSC 127
           ESPAWWSP+F+ KIDSMLRS + WS GSLSLIRIRHCSD SL LV Q CPNLEVLSIKSC
Sbjct: 62  ESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQLVAQGCPNLEVLSIKSC 121

Query: 128 PNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQH 187
            NVTD+SMAKIALGCQKL+EVDISYC+EIS+ SL+LIG+HCPNIKTLKRNFFNTLDPSQ 
Sbjct: 122 ANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQ 181

Query: 188 TGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDL 247
            GIVP+ YLNACPQDVDSEA AIAKFMPNLEHL+LCFSKL+AKAL+LIC+GCPNLKYLDL
Sbjct: 182 KGIVPDSYLNACPQDVDSEAVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDL 241

Query: 248 FGCVNLTSRNIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI 305
           FGCVNLTSR+I NAT++LENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD+FRI
Sbjct: 242 FGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 298

[Close]

BLAST of Moc08g40640 vs. NCBI nr
Match: XP_038890479.1 (F-box protein SKIP1 [Benincasa hispida])

HSP 1 Score: 540.4 bits (1391), Expect = 9.8e-150
Identity = 256/298 (85.91%), Postives = 277/298 (92.95%), Query Frame = 0


Query: 7   SASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEPRFDSAP 66
           S S +WAELTHECLTNI+SRL++EQRWRGPMLVCKLW RAAT  SLFS FDLEPRF+S P
Sbjct: 6   SESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESTP 65

Query: 67  TESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKS 126
           TESPAWWSPEF+TKIDSMLRS + WS GSLSLIRIRHCSD SL  V Q CPNLEVLSIKS
Sbjct: 66  TESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIRHCSDSSLDFVAQGCPNLEVLSIKS 125

Query: 127 CPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQ 186
           C NVTD+SMAKIALGCQKLREVDISYC+EIS+ SLALIG+HCPNIKT+KRNFFN LDPSQ
Sbjct: 126 CANVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTIKRNFFNNLDPSQ 185

Query: 187 HTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLD 246
           H GIVP++YLN+CPQDVDSEAAAIAKFMPNLEHLEL FSKL+AKALSLICEGCP LK+LD
Sbjct: 186 HKGIVPDNYLNSCPQDVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKFLD 245

Query: 247 LFGCVNLTSRNIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI 305
           LFGCVNLTSR+IANAT+S+ENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD+FRI
Sbjct: 246 LFGCVNLTSRDIANATSSMENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 303

[Close]

BLAST of Moc08g40640 vs. NCBI nr
Match: XP_022999743.1 (F-box protein SKIP1-like [Cucurbita maxima])

HSP 1 Score: 540.0 bits (1390), Expect = 1.3e-149
Identity = 254/297 (85.52%), Postives = 275/297 (92.59%), Query Frame = 0


Query: 8   ASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEPRFDSAPT 67
           A  +WAELT ECLTNI SRL++EQRWRGPMLVCKLW RAAT SSLFS FDL+PRFDS PT
Sbjct: 2   AEASWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLQPRFDSTPT 61

Query: 68  ESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKSC 127
           ESPAWWSP+F+TKIDSMLRS + WS GSLSLIRIRHCSD SL LV Q CPNLEVLSIKSC
Sbjct: 62  ESPAWWSPQFETKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQLVAQGCPNLEVLSIKSC 121

Query: 128 PNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQH 187
            NVTD+SMAKIALGCQKL+EVDISYC+EIS+ SL+LIG+HCPNIKTLKRNFFNTLDPSQ 
Sbjct: 122 ANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQ 181

Query: 188 TGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDL 247
            GIVP+ YLNACPQDVDSEA AIAKFMPNLEHLELCFSK++AKAL+LIC+GCPNLKYLDL
Sbjct: 182 KGIVPDSYLNACPQDVDSEAVAIAKFMPNLEHLELCFSKVSAKALTLICKGCPNLKYLDL 241

Query: 248 FGCVNLTSRNIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI 305
           FGCVNLTSR+I NAT+SLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD+FRI
Sbjct: 242 FGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 298

[Close]

BLAST of Moc08g40640 vs. ExPASy Swiss-Prot
Match: Q9FDX1 (F-box protein SKIP1 OS=Arabidopsis thaliana OX=3702 GN=SKIP1 PE=1 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 7.2e-95
Identity = 171/296 (57.77%), Postives = 216/296 (72.97%), Query Frame = 0


Query: 12  WAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEPRFDSAPTESPA 71
           W  L  E L NI+SRL++++ W GPM V K W        L+S FDLEP FDS P ES  
Sbjct: 8   WGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYP-ESTH 67

Query: 72  WWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKSCPNVT 131
            WSPEF+ K+D MLRSV+DWS G L+ IR+RHCSD +L     RCPNL+VL+I+S PNVT
Sbjct: 68  LWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHCSDHALSYAADRCPNLQVLAIRSSPNVT 127

Query: 132 DKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIV 191
           D SM KIA  C+ L+E+DISYC+EISH++L +IGR+CPN++ LKRN  +    S+H G V
Sbjct: 128 DASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDW--SSRHIGSV 187

Query: 192 PEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCV 251
           P +YL+ACPQD D+EA AI K M NLEHLE+ FS+L+ K L+ ICEGCP L+YLDLFGCV
Sbjct: 188 PTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFGCV 247

Query: 252 NLTSRNIANATTSLENL-EIRKPNFYIPRS--VFHTERYGHWRLYDERFQTDVFRI 305
           +L+SR+I +  + L+ L E++KP+ Y+PRS  V  TERYGHWRLYDERF     RI
Sbjct: 248 HLSSRDITSNVSRLKWLKEVKKPDVYVPRSGDVAQTERYGHWRLYDERFDIQAMRI 300

[Close]

BLAST of Moc08g40640 vs. ExPASy Swiss-Prot
Match: Q9M096 (Putative F-box/LRR-repeat protein 19 OS=Arabidopsis thaliana OX=3702 GN=FBL19 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 4.2e-79
Identity = 154/283 (54.42%), Postives = 192/283 (67.84%), Query Frame = 0


Query: 10  PAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEPRFDSAPTES 69
           P W+ELT ECL +I SRLS EQRW GPMLV K W  A    +L + FDLE RF S P ES
Sbjct: 18  PDWSELTRECLLDIFSRLSQEQRWIGPMLVSKNWMNACYDPTLNTIFDLETRFLSFP-ES 77

Query: 70  PAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKSCPN 129
             WW+PEF+ K+DS LRSV+D S G L+ IRIRHC++ SL    +RCPNLEVL IK+CPN
Sbjct: 78  INWWTPEFEDKVDSFLRSVVDRSEGGLTEIRIRHCTERSLSYAAERCPNLEVLWIKNCPN 137

Query: 130 VTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTG 189
           VTD SM KIA+ C  LRE+DISY Y I+HESL  +GR C N+K LKRN    L PS  T 
Sbjct: 138 VTDASMEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILKRNLLPRLGPSLPTI 197

Query: 190 IVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFG 249
           + P DYL   P+  + EA  I K+M  L+HLE+ +S LTA+ L  +C+GC NL+Y+DL G
Sbjct: 198 VAPLDYLATFPRYGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRG 257

Query: 250 CVNLTSRNIANATTSLENL-EIRKPNFYIPRSVFHTERYGHWR 292
           C++LT  +I   T+ L+NL EI KP+F  P +V    R G+ R
Sbjct: 258 CISLTRSDINTNTSGLKNLTEIIKPDFNPPIAVLRVPRPGNPR 299

[Close]

BLAST of Moc08g40640 vs. ExPASy Swiss-Prot
Match: Q9S9V9 (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.3e-27
Identity = 85/244 (34.84%), Postives = 124/244 (50.82%), Query Frame = 0


Query: 12  WAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEPRFDSAPTESPA 71
           WAEL  +  ++I+ RL   +  +    VCK W R     S++ + D++ R D A      
Sbjct: 181 WAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRA------ 240

Query: 72  WWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRH--CSDLSLHLVPQRCPNLEVLSIKSCPN 131
                F+  ++SM R  +D SHG L  I I +   +DL ++ +  R  NL+ L +  C  
Sbjct: 241 ----AFKYDLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMY-IADRSSNLKSLGLVRCFP 300

Query: 132 VTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTG 191
           +TD+ +AK       L  +++SYC   S ESL  IGR CPN+KTLK N            
Sbjct: 301 ITDEGVAKAVSKVPLLEYLEVSYCL-FSGESLRDIGRSCPNLKTLKLN------------ 360

Query: 192 IVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFG 251
             PE  +       D  A AIA+ MP L HL+L  + LT K L+ I +GCP+L++LDL  
Sbjct: 361 RAPE--IMFSNSGFDDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQ 398

Query: 252 CVNL 254
           C N+
Sbjct: 421 CFNI 398

[Close]

BLAST of Moc08g40640 vs. ExPASy Swiss-Prot
Match: Q9S9V8 (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.6e-22
Identity = 75/246 (30.49%), Postives = 114/246 (46.34%), Query Frame = 0


Query: 12  WAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEPRFDSAPTESPA 71
           WAEL  E  ++I+ RL   +  +    VCK W R     S++ + D+  + +        
Sbjct: 21  WAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVN----- 80

Query: 72  WWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLS-LHLVPQRCPNLEVLSIKSCPNV 131
             S E    I+ +    +D S G L  I I +  + S L+ +  R  NL  L +  C  V
Sbjct: 81  --SVELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPV 140

Query: 132 TDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGI 191
             + + + A+    L E+DI+Y   I  + L ++G+ CPN++TLK N             
Sbjct: 141 LSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLN------------- 200

Query: 192 VPEDYLNACPQDV---DSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDL 251
                   C  DV   D  A AIA+ MP L HL+L  + L+   L+ I EGCP+LK L L
Sbjct: 201 --------CTGDVKCCDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGL 238

Query: 252 FGCVNL 254
             C+N+
Sbjct: 261 HQCLNI 238

[Close]

BLAST of Moc08g40640 vs. ExPASy Swiss-Prot
Match: Q9M0U9 (F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 5.8e-20
Identity = 75/247 (30.36%), Postives = 113/247 (45.75%), Query Frame = 0


Query: 9   SPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEPRFDSAPTE 68
           S  W EL  E  + I+ RL   +       VC+ W R     S++ + D+    D     
Sbjct: 16  STNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGD----- 75

Query: 69  SPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLS-LHLVPQRCPNLEVLSIKSC 128
                  +    ++ M R  +D S G L  I I +   +  L+ +  R  NL  L +  C
Sbjct: 76  -----LDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRC 135

Query: 129 PNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQH 188
             +TD    + A+    L E+++SYC   S ESL ++G+ C N+KTLK            
Sbjct: 136 SQITDDGFVE-AVVKLPLEELELSYC-SFSVESLRVVGQCCLNMKTLK------------ 195

Query: 189 TGIVPEDYLNACPQ-DVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLD 248
                   LN  PQ + D +A AIA+ MP L HL+LC + L+   L+ I + C NL++LD
Sbjct: 196 --------LNKHPQKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLD 230

Query: 249 LFGCVNL 254
           L  C N+
Sbjct: 256 LRRCFNV 230

[Close]

BLAST of Moc08g40640 vs. ExPASy TrEMBL
Match: A0A6J1E082 (F-box protein SKIP1-like OS=Momordica charantia OX=3673 GN=LOC111024715 PE=4 SV=1)

HSP 1 Score: 636.0 bits (1639), Expect = 8.3e-179
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEP 60
           MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEP
Sbjct: 1   MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEP 60

Query: 61  RFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLE 120
           RFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLE
Sbjct: 61  RFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLE 120

Query: 121 VLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFN 180
           VLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFN
Sbjct: 121 VLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFN 180

Query: 181 TLDPSQHTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCP 240
           TLDPSQHTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCP
Sbjct: 181 TLDPSQHTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCP 240

Query: 241 NLKYLDLFGCVNLTSRNIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD 300
           NLKYLDLFGCVNLTSRNIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD
Sbjct: 241 NLKYLDLFGCVNLTSRNIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD 300

Query: 301 VFRI 305
           VFRI
Sbjct: 301 VFRI 304

[Close]

BLAST of Moc08g40640 vs. ExPASy TrEMBL
Match: A0A6J1G461 (F-box protein SKIP1-like OS=Cucurbita moschata OX=3662 GN=LOC111450576 PE=4 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 2.8e-150
Identity = 254/297 (85.52%), Postives = 275/297 (92.59%), Query Frame = 0


Query: 8   ASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEPRFDSAPT 67
           A P+WAELT ECLTNI SRL++EQRWRGPMLVCKLW RAAT SSLFS FDLEPRFDS PT
Sbjct: 2   AEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPT 61

Query: 68  ESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKSC 127
           ESPAWWSP+F+ KIDSMLRS + WS GSLSLIRIRHCSD SL LV Q CPNLEVLSIKSC
Sbjct: 62  ESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQLVAQGCPNLEVLSIKSC 121

Query: 128 PNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQH 187
            NVTD+SMAKIALGCQKL+EVDISYC+EIS+ SL+LIG+HCPNIKTLKRNFFNTLDPSQ 
Sbjct: 122 ANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQ 181

Query: 188 TGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDL 247
            GIVP+ YLNACPQDVDSEA AIAKFMPNLEHL+LCFSKL+AKAL+LIC+GCPNLKYLDL
Sbjct: 182 KGIVPDSYLNACPQDVDSEAVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDL 241

Query: 248 FGCVNLTSRNIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI 305
           FGCVNLTSR+I NAT++LENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD+FRI
Sbjct: 242 FGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 298

[Close]

BLAST of Moc08g40640 vs. ExPASy TrEMBL
Match: A0A6J1KKL1 (F-box protein SKIP1-like OS=Cucurbita maxima OX=3661 GN=LOC111494002 PE=4 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 6.2e-150
Identity = 254/297 (85.52%), Postives = 275/297 (92.59%), Query Frame = 0


Query: 8   ASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEPRFDSAPT 67
           A  +WAELT ECLTNI SRL++EQRWRGPMLVCKLW RAAT SSLFS FDL+PRFDS PT
Sbjct: 2   AEASWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLQPRFDSTPT 61

Query: 68  ESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKSC 127
           ESPAWWSP+F+TKIDSMLRS + WS GSLSLIRIRHCSD SL LV Q CPNLEVLSIKSC
Sbjct: 62  ESPAWWSPQFETKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQLVAQGCPNLEVLSIKSC 121

Query: 128 PNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQH 187
            NVTD+SMAKIALGCQKL+EVDISYC+EIS+ SL+LIG+HCPNIKTLKRNFFNTLDPSQ 
Sbjct: 122 ANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQ 181

Query: 188 TGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDL 247
            GIVP+ YLNACPQDVDSEA AIAKFMPNLEHLELCFSK++AKAL+LIC+GCPNLKYLDL
Sbjct: 182 KGIVPDSYLNACPQDVDSEAVAIAKFMPNLEHLELCFSKVSAKALTLICKGCPNLKYLDL 241

Query: 248 FGCVNLTSRNIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI 305
           FGCVNLTSR+I NAT+SLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD+FRI
Sbjct: 242 FGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 298

[Close]

BLAST of Moc08g40640 vs. ExPASy TrEMBL
Match: A0A5D3BD72 (F-box protein SKIP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00320 PE=4 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 4.9e-147
Identity = 255/304 (83.88%), Postives = 276/304 (90.79%), Query Frame = 0


Query: 1   MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEP 60
           M +PS S S +WAELTHECLTNI+SRL++EQRWRGPMLVCK WFRAA   SLFS FDLEP
Sbjct: 1   MAEPS-SESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEP 60

Query: 61  RFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLE 120
           RF+SAPTESPAWW PEF+TKIDSMLRS + WS GSLS+IR+RHCSD SL  V Q CPNLE
Sbjct: 61  RFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLE 120

Query: 121 VLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFN 180
           VLSIKSC NVTD SMAKIA GCQKLREVDISYC+EIS+ SLALIGRHCPNIKTLKRN+FN
Sbjct: 121 VLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFN 180

Query: 181 TLDPSQHTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCP 240
            LDPSQH GIVP++YL+ACPQDVDSEAAAIAKFM NLEHLEL FSKL+AKAL+ ICEGCP
Sbjct: 181 NLDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCP 240

Query: 241 NLKYLDLFGCVNLTSRNIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD 300
           NLKYLDLFGCVNLTSR+IANAT+SLENLEIRKPNFYIPRSVFHTERY HWRLYDERFQTD
Sbjct: 241 NLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTD 300

Query: 301 VFRI 305
           +FRI
Sbjct: 301 IFRI 303

[Close]

BLAST of Moc08g40640 vs. ExPASy TrEMBL
Match: A0A1S3BUE6 (F-box protein SKIP1 OS=Cucumis melo OX=3656 GN=LOC103493639 PE=4 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 4.9e-147
Identity = 255/304 (83.88%), Postives = 276/304 (90.79%), Query Frame = 0


Query: 1   MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEP 60
           M +PS S S +WAELTHECLTNI+SRL++EQRWRGPMLVCK WFRAA   SLFS FDLEP
Sbjct: 1   MAEPS-SESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEP 60

Query: 61  RFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLE 120
           RF+SAPTESPAWW PEF+TKIDSMLRS + WS GSLS+IR+RHCSD SL  V Q CPNLE
Sbjct: 61  RFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLE 120

Query: 121 VLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFN 180
           VLSIKSC NVTD SMAKIA GCQKLREVDISYC+EIS+ SLALIGRHCPNIKTLKRN+FN
Sbjct: 121 VLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFN 180

Query: 181 TLDPSQHTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCP 240
            LDPSQH GIVP++YL+ACPQDVDSEAAAIAKFM NLEHLEL FSKL+AKAL+ ICEGCP
Sbjct: 181 NLDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCP 240

Query: 241 NLKYLDLFGCVNLTSRNIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD 300
           NLKYLDLFGCVNLTSR+IANAT+SLENLEIRKPNFYIPRSVFHTERY HWRLYDERFQTD
Sbjct: 241 NLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTD 300

Query: 301 VFRI 305
           +FRI
Sbjct: 301 IFRI 303

[Close]

BLAST of Moc08g40640 vs. TAIR 10
Match: AT5G57900.1 (SKP1 interacting partner 1 )

HSP 1 Score: 348.6 bits (893), Expect = 5.1e-96
Identity = 171/296 (57.77%), Postives = 216/296 (72.97%), Query Frame = 0


Query: 12  WAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEPRFDSAPTESPA 71
           W  L  E L NI+SRL++++ W GPM V K W        L+S FDLEP FDS P ES  
Sbjct: 8   WGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYP-ESTH 67

Query: 72  WWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKSCPNVT 131
            WSPEF+ K+D MLRSV+DWS G L+ IR+RHCSD +L     RCPNL+VL+I+S PNVT
Sbjct: 68  LWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHCSDHALSYAADRCPNLQVLAIRSSPNVT 127

Query: 132 DKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIV 191
           D SM KIA  C+ L+E+DISYC+EISH++L +IGR+CPN++ LKRN  +    S+H G V
Sbjct: 128 DASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDW--SSRHIGSV 187

Query: 192 PEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCV 251
           P +YL+ACPQD D+EA AI K M NLEHLE+ FS+L+ K L+ ICEGCP L+YLDLFGCV
Sbjct: 188 PTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFGCV 247

Query: 252 NLTSRNIANATTSLENL-EIRKPNFYIPRS--VFHTERYGHWRLYDERFQTDVFRI 305
           +L+SR+I +  + L+ L E++KP+ Y+PRS  V  TERYGHWRLYDERF     RI
Sbjct: 248 HLSSRDITSNVSRLKWLKEVKKPDVYVPRSGDVAQTERYGHWRLYDERFDIQAMRI 300

[Close]

BLAST of Moc08g40640 vs. TAIR 10
Match: AT4G30640.1 (RNI-like superfamily protein )

HSP 1 Score: 296.2 bits (757), Expect = 3.0e-80
Identity = 154/283 (54.42%), Postives = 192/283 (67.84%), Query Frame = 0


Query: 10  PAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEPRFDSAPTES 69
           P W+ELT ECL +I SRLS EQRW GPMLV K W  A    +L + FDLE RF S P ES
Sbjct: 18  PDWSELTRECLLDIFSRLSQEQRWIGPMLVSKNWMNACYDPTLNTIFDLETRFLSFP-ES 77

Query: 70  PAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKSCPN 129
             WW+PEF+ K+DS LRSV+D S G L+ IRIRHC++ SL    +RCPNLEVL IK+CPN
Sbjct: 78  INWWTPEFEDKVDSFLRSVVDRSEGGLTEIRIRHCTERSLSYAAERCPNLEVLWIKNCPN 137

Query: 130 VTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTG 189
           VTD SM KIA+ C  LRE+DISY Y I+HESL  +GR C N+K LKRN    L PS  T 
Sbjct: 138 VTDASMEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILKRNLLPRLGPSLPTI 197

Query: 190 IVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFG 249
           + P DYL   P+  + EA  I K+M  L+HLE+ +S LTA+ L  +C+GC NL+Y+DL G
Sbjct: 198 VAPLDYLATFPRYGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRG 257

Query: 250 CVNLTSRNIANATTSLENL-EIRKPNFYIPRSVFHTERYGHWR 292
           C++LT  +I   T+ L+NL EI KP+F  P +V    R G+ R
Sbjct: 258 CISLTRSDINTNTSGLKNLTEIIKPDFNPPIAVLRVPRPGNPR 299

[Close]

BLAST of Moc08g40640 vs. TAIR 10
Match: AT4G05497.1 (RNI-like superfamily protein )

HSP 1 Score: 107.1 bits (266), Expect = 2.6e-23
Identity = 75/246 (30.49%), Postives = 114/246 (46.34%), Query Frame = 0


Query: 12  WAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEPRFDSAPTESPA 71
           WAEL  E  ++I+ RL   +  +    VCK W R     S++ + D+  + +        
Sbjct: 21  WAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVN----- 80

Query: 72  WWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLS-LHLVPQRCPNLEVLSIKSCPNV 131
             S E    I+ +    +D S G L  I I +  + S L+ +  R  NL  L +  C  V
Sbjct: 81  --SVELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPV 140

Query: 132 TDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGI 191
             + + + A+    L E+DI+Y   I  + L ++G+ CPN++TLK N             
Sbjct: 141 LSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLN------------- 200

Query: 192 VPEDYLNACPQDV---DSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDL 251
                   C  DV   D  A AIA+ MP L HL+L  + L+   L+ I EGCP+LK L L
Sbjct: 201 --------CTGDVKCCDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGL 238

Query: 252 FGCVNL 254
             C+N+
Sbjct: 261 HQCLNI 238

[Close]

BLAST of Moc08g40640 vs. TAIR 10
Match: AT4G05460.1 (RNI-like superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 4.1e-21
Identity = 75/247 (30.36%), Postives = 113/247 (45.75%), Query Frame = 0


Query: 9   SPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEPRFDSAPTE 68
           S  W EL  E  + I+ RL   +       VC+ W R     S++ + D+    D     
Sbjct: 16  STNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGD----- 75

Query: 69  SPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLS-LHLVPQRCPNLEVLSIKSC 128
                  +    ++ M R  +D S G L  I I +   +  L+ +  R  NL  L +  C
Sbjct: 76  -----LDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRC 135

Query: 129 PNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQH 188
             +TD    + A+    L E+++SYC   S ESL ++G+ C N+KTLK            
Sbjct: 136 SQITDDGFVE-AVVKLPLEELELSYC-SFSVESLRVVGQCCLNMKTLK------------ 195

Query: 189 TGIVPEDYLNACPQ-DVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLD 248
                   LN  PQ + D +A AIA+ MP L HL+LC + L+   L+ I + C NL++LD
Sbjct: 196 --------LNKHPQKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLD 230

Query: 249 LFGCVNL 254
           L  C N+
Sbjct: 256 LRRCFNV 230

[Close]

BLAST of Moc08g40640 vs. TAIR 10
Match: AT5G52480.1 (RNI-like superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 3.0e-19
Identity = 66/210 (31.43%), Postives = 99/210 (47.14%), Query Frame = 0


Query: 82  DSMLRSVLDWSHGSLSLIRIRHC-SDLSLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIAL 141
           +++ R+ +D S G L  I I    SD  L  + +R  NL  L +  C  +TD    +  +
Sbjct: 16  EAICRNAVDRSEGGLLEINIGDFGSDSLLTYIAERSSNLRSLRL-MCSEITDDGFVQAVV 75

Query: 142 GCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACP 201
               L E+++S    +S ES+ L G  CPN+KTL  N                 YL++  
Sbjct: 76  KLPMLEELEVS-GISLSGESMKLAGLSCPNLKTLMLNRL--------------FYLSS-- 135

Query: 202 QDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRNIAN 261
            D D +A AIA+ MP L HL+LC +KLT   L+ I +GCP+L++LDL  C+NL       
Sbjct: 136 DDDDHDAIAIAESMPKLRHLQLCGNKLTKTGLNAILDGCPHLEHLDLRQCINLVGNLEKR 195

Query: 262 ATTSLENLEIRKPNFYIPRSVFHTERYGHW 291
               +++L     +            Y HW
Sbjct: 196 CFEKIKDLRRHNDSTSADYPFSFETYYFHW 207

The following BLAST results are available for this feature:

BLAST of Moc08g40640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158176.1	1.7e-178	100.00	F-box protein SKIP1-like [Momordica charantia]	[more]
KAG6599142.1	2.6e-150	85.86	F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030085...	[more]
XP_022946543.1	5.8e-150	85.52	F-box protein SKIP1-like [Cucurbita moschata]	[more]
XP_038890479.1	9.8e-150	85.91	F-box protein SKIP1 [Benincasa hispida]	[more]
XP_022999743.1	1.3e-149	85.52	F-box protein SKIP1-like [Cucurbita maxima]	[more]

BLAST of Moc08g40640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FDX1	7.2e-95	57.77	F-box protein SKIP1 OS=Arabidopsis thaliana OX=3702 GN=SKIP1 PE=1 SV=1	[more]
Q9M096	4.2e-79	54.42	Putative F-box/LRR-repeat protein 19 OS=Arabidopsis thaliana OX=3702 GN=FBL19 PE...	[more]
Q9S9V9	1.3e-27	34.84	Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE...	[more]
Q9S9V8	3.6e-22	30.49	Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4...	[more]
Q9M0U9	5.8e-20	30.36	F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1	[more]

BLAST of Moc08g40640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E082	8.3e-179	100.00	F-box protein SKIP1-like OS=Momordica charantia OX=3673 GN=LOC111024715 PE=4 SV=...	[more]
A0A6J1G461	2.8e-150	85.52	F-box protein SKIP1-like OS=Cucurbita moschata OX=3662 GN=LOC111450576 PE=4 SV=1	[more]
A0A6J1KKL1	6.2e-150	85.52	F-box protein SKIP1-like OS=Cucurbita maxima OX=3661 GN=LOC111494002 PE=4 SV=1	[more]
A0A5D3BD72	4.9e-147	83.88	F-box protein SKIP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G...	[more]
A0A1S3BUE6	4.9e-147	83.88	F-box protein SKIP1 OS=Cucumis melo OX=3656 GN=LOC103493639 PE=4 SV=1	[more]

BLAST of Moc08g40640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57900.1	5.1e-96	57.77	SKP1 interacting partner 1	[more]
AT4G30640.1	3.0e-80	54.42	RNI-like superfamily protein	[more]
AT4G05497.1	2.6e-23	30.49	RNI-like superfamily protein	[more]
AT4G05460.1	4.1e-21	30.36	RNI-like superfamily protein	[more]
AT5G52480.1	3.0e-19	31.43	RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 251..271
None	No IPR available	GENE3D	1.20.1280.50		coord: 11..52 e-value: 8.7E-7 score: 30.7
None	No IPR available	PANTHER	PTHR16134:SF29	F-BOX PROTEIN SKIP1	coord: 11..304
None	No IPR available	PANTHER	PTHR16134	F-BOX/TPR REPEAT PROTEIN POF3	coord: 11..304
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 99..267
IPR006553	Leucine-rich repeat, cysteine-containing subtype	SMART	SM00367	LRR_CC_2	coord: 142..167 e-value: 0.071 score: 22.2 coord: 214..238 e-value: 190.0 score: 4.6 coord: 116..141 e-value: 1.0E-4 score: 31.7 coord: 239..264 e-value: 2.1 score: 17.3
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 92..275 e-value: 1.6E-32 score: 114.5
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 12..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g40640.1	Moc08g40640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0005515	protein binding