Moc08g39960 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc08g39960
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionChlorophyll A-B binding protein
Locationchr8: 30577268 .. 30583730 (+)
RNA-Seq ExpressionMoc08g39960
SyntenyMoc08g39960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCACTGCCTTGTCTTCCCAATACCTCTCTTTCCGCCATGCCCATCCTCCTGCAACTTTCTCCAGGTAATCTCGGCTTCTTCCTCAAATACCCATTTCTCCTCTCCATCAAATTGGTGGGTTTTATTTAGTTTCCCCTTTTTCATCTCGTGTGATTCTATCGGATCGAGAAAATTATCTGGCATCGATTTCTCTGTTTTTTGTAGCATCGGATGTTCATAGGTCGGTAGAGGGAACGATGAAATTAACTGTTTTCTTTTCTGGCAGCTGAGTGATTTGTTCTGTGCCTCTTACCCATTTCTCTCCTTGTTTTTTTTCTTCATTTAACTTTGTCTGTGATCATAGTTCATGTTGAAAGTAGCGTTTATGGGTTCTGAAAAACATCGCAAGCTAAAGAGAATGCCGAATAGTAGAAGCTTTATGTATTGAATTCGTGCATAGCTTAGTGGATAAGGGACCTATTACAAGATAAATTGCTGAACTAAGAAGAAGCTTTTTGTTCCCATCCTTTTGATCGATTAGAGTTTGAACTGCTCTGAGATGTCCAAGAATTTTGTATTCCAGGGTATGATTATTGGTGTAGGCCGTTTAGATTTCCCCCAATTTGATTTAGTTCGTCATGCTTTTAGAAGTGTGGTGCTTGCTTTCATGAGTTGGGCACTAAGAAACTAAGACCTACGTTATTTTACTTTTACAGGAAAGAATGTGGTCTCATTAGTATTTTACTTTTAGTCACCAAGAAGCCGAAATAAAGGAACTAAACGAGTGTGAAGAGCCATTGCAGCTACCTTGATCCTCTAATATTCTGGGCCTTCTTCACCAGTTACCTTACAAATTCTACTTGTCTGAGCTAACTTGCACACATTTCGACTAATCTCACGTGACAGTTATTTAGTCTTTTTTTTTTCCCCTGTCTATGGGAGTTACAAAAAACATCTCCAATTGGATATCAAGGCTATAAACTATAAATTATAATGATGGAAACGAGGAGAACATTTACGCCAAGAAACAACAAAAAAGACAATGGAATCAAAGAAGTGTTCAAAGGGGAGCTATTTTCTTGAAAAATTGGATGATTTCTTTCCATCCATATAGCCCAAAACCCAGCTCGGACAAAATGCATCCATAGAAGCTTTTTCTCCTTAGTGAAGGGGTGACCTGTGAGTAGGTAAACCAATATAGCTTCAGATGGTAAGGGAGTGTGCCATCTAAAAAGTAGTGAGGATTTTGTTCCAATATTTTGTTGAGAAGATGCAAGTGACAAATAAGGGACCTGTAATTCAGACTTTTCTTCACAGAGGACGACCAATGAGGGGATAGTTGCATATAAGGCATTCTCCACTGCAATTTGTCGCGAGTGTTAATAGCTTTCAGAACTAACCTCCCATAGAATAGAACAAACTTTATCTTTTTATGGTAATAATCACTCCATATGGACTTGTAAAAGATGGGGGTTCTTAATATTTGATAAATCCCGATTAAGAGAGTTGATAGAGAAGAGGCCATTTGGTTCCAAACTCCATAAGTATATATCCTTGTCCATAGAATGATGTTTTTTGGCCAAAATCTGTAGGAGGGATGTCATTTCTGTAATTTCTGCTTCTTTTAAATTTCTTCGAAATCTAAAGTCCCAAGGAGCCACTTCCTTAGACGGTTATACCACATTTCATCTATTGTATTGTAATCAGCTTGTCAGATGTCAATGCAAAAAGAAGGGAGTACGTGCTGTAAAGGTGGTCCTTAGTCAACCATGAGTCCTTCCAAAAAGCTGGGAATTTACCACCAACCACCTTGATGGAAATTCCGCTGAAGATCAGGGCCTATACCTTTAGAGTCTCTTTCCATGGTCCATGCACCATTGCTGTTTGTGGAAGCTCTCTGATGGTGGTGGCGAACAGTGGGCCCATATTTCTCATCTATCACCTTTAGAGTTTCGCCAAAGGGCATTTTCTTCCAACAAATAACACCAAATCCATTTGGAAAGAAGAGCCTTGTTCTTTGATTTGATATTGCAAATGCCGAGTCCACCTTCTTCCAAAGGCCCACTGACTTTGTCCCAATAGACCATGCCCTGCCCTTCTTTGTCTTTGTAGCCCTTCCAAAGGGACTTTCAGATGATTCTATTTCTCTCTAAATCTTTAGCGCTCTTTGTTTGGCTAGAAAAGAAGGAAAAATAATAAAGAGGGAGGTTTGAGAGAGTGGCTTGTATAAGTGTAAGTCTTCCACCTTTAGATATTGTAGAGACTAAAGTTGGAGAGAATTCAACGTTCTATATTCTCATTATTAAAGTCTATATATATATAGACAAATATACAAGGTTGACCTAATCCTATAAGGAGAAGGTAAAGGACAAATTAATATTAATATAAGAATATAAAATATACTAATATCTATACTCTAACACTCCCCCTCAAGTTGGTGCATATATGTTAATCATGCCCAACTTGTTAGACAAATAATCTATTCGTGCTCCATTCAACTTGTGTTCTGTGATTTTTGATATCATTGGGATCACCTCAGAAGTCACGATTGATTTCTTCTCAGCCATAACAAACAAACTAACTTATTTGAATAAAACGACAGAACCAAACAAAACCAAATCAGATCGAACCGAACTTGAACTTGATGAACCAAACCACTTGAAACCAAACCGGTTGAACTGGACCACTTGAACCGGATTAGGTATTTTCTAGAACCAGAAACCCTAAGTGCTACCCCACGACAACCAGAGGGGCAAAGGCGATTGGCGGTGATGGAAGCGCACGGCAACTAGCGGCGACGAAGGTGCGAAGAACGGCGAGACGAAACCCACGAATAGCAATTGGAAAACAGCAGCGTTGGCGAATCAGCAAACGGCGGCGACCGGCGACCGGCGGCAGCGGTGGTGGTCGGCGGCGGGCGGTGGTGAGTTGTGTTGGATAGCAATGAACAAAACCCTAAGGCACAAAACCCTAATGGGCACAAAACCCTAATGGGCGCAAAACCCTAATGGGCATCAAAACCCTAATGGGCGCAAGAAACTTAGAGCTCTGATACCATGTAGAGACTAAAGTTGGAGAGAATTCAACATTCTATATTCTCATTATTAAAGTCTATATATATAGACAAATATACAAGGTTGACCTAATCCTATAAGGAGAAGGTAAAAGACAAATTAATATTAATATAAGAATATAAAATATACTAATATCTATACTCTAATAGATATGAAGAGGGCTCCCAAGTGCTGAGCTTTTTTCTAACCTTTTCCAGCATAGGATCCCAAAAAGAGGAGGTATTGTACTTACCATTTAGGGGAAGACCTAAGTAAGTATGCCAGATACCATTTTTACACACAAACCAAGCTGCCAACAGCTCAATTTCAGTATCCTCCATATTAATACCCATCATTTCAGATTTTTGAAGGTTGATGTTTAGACTAGATGTTTCTTCAAAGATTCTGATGGTGTTGAAAATTTTGGAGAGGTGATCGTTGTCTGTTGAAGAGAAAAGAATAGCGTCGTCTGCAAATTATAGGCGATGGACTTGAAAAGAGATTTTCCCCACCGAACAGCTCTTAATCAGATGGAATCAGCAGCTTGAGTTATCAATCTACTGAGGCAGTCCACTATTAGAATGAAGAGGATGGGTGTGAGTGGGTCACCTTGTCCAAGGCCTCTTGTTGCCAAGAACGTTACTCTAGGTCTCCCGTTTATGAAAATAGAGAAATTTGTAGATGATTTGAATCCCCTAATCCATCTCCTCCATATAAGTCCAAAACCTTTTGCTTCCAGAATATCATTTAGAAAATCCCAGTCCACTTTGTCAAATGCTTTTTCAATATCAAGTTTTATGACCATAACTATAGTTACTAAGAAAATTCATATGATATTATCCCAAGTAGGTGGCCATCACGGTTTCAACTCATTTCCTCTTAGCACTTTACGTTTTTATTGAATCCAATGATCACTAGGTCAATCCATGGTAGTTCATCATTATTCACTCATTATTTACTCCTCTCTTTGTGCTCTGTATATTCCCTCAGTGAAGGGATTCCATTCGTTCCCTAGAATTGGAAAAATTCAGAATGAGGAACTTCCCTTAAAATGCTCCAATTTCCTAAGACGTATATAGGCATTGAAATGAGCGCTAAAATGTCGTCTCATTTACTTTTGAGCTATGTCTCAAAAAATGTGCCCAATCATTCTTAACTAGATGTTCCAAATTATGGTGTTGAAACTGAATTCGTAGATTTTCGCTCTTCCCTGTTAGTTGATGACCAGCAAAAGCACTTAAATAGTTGGATACAAGTTTCCACACATTAAATGGTGCTGATATTGTAGCCATTATTTCGGTCATGGGAAATGTTACAACTCTAATTTGAAGTGTTATAAGAAAGGAACTAAAACAATATTGAATGAATTTGTTTAACTGATATTATCTGTTGATCCATGGGCATTATTTTCTGATCATGAAACAGTATTTCATCCTTGCTAATTGCTGCATCATTCTTGATGTTCCTTTCCTTTCCAGGTGGGGTTGGAACAGGGATCAAGGTGGAGGCAAAATTACCCATAGAACAAGGGGTCAAGCGTTTCGAATCTTGGCCAACCCTAATGTACGCTTTGACTCAAGGCTTCTACATGTTTAATGGCAATATATTTGGTTTGAATATGGTCAAAGATTTTGTAGGTATGTCATTAGTAATTGATTAGTGAATGCTTATGATAACAAACTGCCTAGATATATTTGGAGAATTCTCCCCCACCTGGCCTTGAATTTGAATAGAATCAATCTTTCAGCATCTCTTATGCTTGAAATTTGACATAGTTGGCTGTCTGATTCCTTGGATTTGAAGTGCTGTGACAGTTGATATACCGTTGTTCGGTTACTTGTTTATCCTATGCTTGTTATTAGATCTTAGGATTTCTATCAACCTTGGAGAATCTGTGATTCAATGCATTTTCTTCCTTTTGGATTTGTTTTCATCAAGCTGCAATCTCGCAATAAAGTCATTTTGTAAGTTGATTATGGGCTTCTGTTCTGCAACAAACATATATTATGTCAATTGTTTAGGTCTCTCCTGGGAAAGATGGCTTTGTTAAAGAGGTGATCATGGTAGATCCTTTGGAAGCCAAACGAATGGCTGCGAAACAAATGGAAAAGATAAAAGCAAAAGAGAAATTGAAGGTAAAGAAAGTTATTGTCTATGGTGCAAAACTTGTTTATAAACAGTATGGATAGTTTTCCTAAGTTCTTTCTTGAAGGAGAGAATAATGGCTATACAAATTTAAGATGTGCTGGAAATAATGTATGTTGTGAAATGTGAACGCAGCGAAGACGTCAAATAGAAGCGATTAATGGAGCATGGGCAATGATTGGTCTCACTGCAGGGCTCGTCATCGAAGGTCAAACTGGAAAAGGCATTCTAGCGCAGGTGAAAAGTTATAGTTTTCTTACGTTCTAACATTATTAGAAATTAATATTGGTTTAGGACATACTCAGAAATGGTAGCTTAAAACCTTTTCTACAGTAACCCCAATGGTTGTGCGGAGCGGTTAAAAAGGTCCTTAAATACGACAAGAATTTATGGCATCGACTGCTTCATTTAGATACGTTATTTTCACTCGAACGTTACAAGGTTCGATGATAGTCATCATTTTTCTTCATTTGAGTAAACATGGAGGTGAAAGTGTTGGGTTGGACAACAGGTGCCTAATTTCTAAAGCTTGGAATTCTAACCTGTATGTCTTTGTGTTCAATCTCTCTAAGACTATTTAGAACCAAATATTATCAAACTTCTTTTTCTTCCCCTCCTGTTTGATAAATATTTTTTTTCAAAGATTTTTATATCTAAAAACTAAGCCATTTTGCTTACAACTTCTTTGTCTCTGATCTTCTTTATTGAAAATGTTCTGAAATCCTAGAGAAAATTTAAGAACTTAAAAGAATTTTCAAATTTCGCCAAGAGATCCTTTGGGTTCATCTGGACATGAAAAGAATATCCTTTTTTCAAAATCATGCTGGAAGGTCATCCCTTCAAACTCGGAAAAAGAAATTCTTTGGGTTCGAGTTCGATGTAAGCTTTCTTGTGGAGGAACAATCGAATGGTCAATAACTCATTTTATTTCATTTTTCTCAATGAATGTGTGATTTTTCATAAACAAATTGTACAAGCTTTAATCTAGGTTGAATGGACTTTGGAGGAATGAGTTCAAACTCCTAAGCCCTACGTGCCTAAGATATTAAAATACTTATAATTTCTTGACAACTTAATGTCTTAGAATCAGCCAACATTAGCACAGGCCTTAATTGCAAAATAGACATTAAACAAAACAGCTTCTCAGTAACAATATTTTCTCCCAACACTAAATTGAAACTTTTCTTGTTTCAAATTTCAATCTCTAACATGTTTTTTCTTCATTATTTTCTAGTTGACCGATTACTTCAACACCGTTGTCCATGTCTTTGTACGATAG

mRNA sequence

ATGGCTTCCACTGCCTTGTCTTCCCAATACCTCTCTTTCCGCCATGCCCATCCTCCTGCAACTTTCTCCAGGTGGGGTTGGAACAGGGATCAAGGTGGAGGCAAAATTACCCATAGAACAAGGGGTCAAGCGTTTCGAATCTTGGCCAACCCTAATGTCTCTCCTGGGAAAGATGGCTTTGTTAAAGAGGTGATCATGGTAGATCCTTTGGAAGCCAAACGAATGGCTGCGAAACAAATGGAAAAGATAAAAGCAAAAGAGAAATTGAAGCGAAGACGTCAAATAGAAGCGATTAATGGAGCATGGGCAATGATTGGTCTCACTGCAGGGCTCGTCATCGAAGGTCAAACTGGAAAAGGCATTCTAGCGCAGTTGACCGATTACTTCAACACCGTTGTCCATGTCTTTGTACGATAG

Coding sequence (CDS)

ATGGCTTCCACTGCCTTGTCTTCCCAATACCTCTCTTTCCGCCATGCCCATCCTCCTGCAACTTTCTCCAGGTGGGGTTGGAACAGGGATCAAGGTGGAGGCAAAATTACCCATAGAACAAGGGGTCAAGCGTTTCGAATCTTGGCCAACCCTAATGTCTCTCCTGGGAAAGATGGCTTTGTTAAAGAGGTGATCATGGTAGATCCTTTGGAAGCCAAACGAATGGCTGCGAAACAAATGGAAAAGATAAAAGCAAAAGAGAAATTGAAGCGAAGACGTCAAATAGAAGCGATTAATGGAGCATGGGCAATGATTGGTCTCACTGCAGGGCTCGTCATCGAAGGTCAAACTGGAAAAGGCATTCTAGCGCAGTTGACCGATTACTTCAACACCGTTGTCCATGTCTTTGTACGATAG

Protein sequence

MASTALSSQYLSFRHAHPPATFSRWGWNRDQGGGKITHRTRGQAFRILANPNVSPGKDGFVKEVIMVDPLEAKRMAAKQMEKIKAKEKLKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLTDYFNTVVHVFVR
Homology
[Close]
BLAST of Moc08g39960 vs. NCBI nr
Match: XP_022153344.1 (uncharacterized protein LOC111020859 [Momordica charantia])

HSP 1 Score: 275.0 bits (702), Expect = 3.5e-70
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 1   MASTALSSQYLSFRHAHPPATFSRWGWNRDQGGGKITHRTRGQAFRILANPNVSPGKDGF 60
           MASTALSSQYLSFRHAHPPATFSRWGWNRDQGGGKITHRTRGQAFRILANPNVSPGKDGF
Sbjct: 1   MASTALSSQYLSFRHAHPPATFSRWGWNRDQGGGKITHRTRGQAFRILANPNVSPGKDGF 60

Query: 61  VKEVIMVDPLEAKRMAAKQMEKIKAKEKLKRRRQIEAINGAWAMIGLTAGLVIEGQTGKG 120
           VKEVIMVDPLEAKRMAAKQMEKIKAKEKLKRRRQIEAINGAWAMIGLTAGLVIEGQTGKG
Sbjct: 61  VKEVIMVDPLEAKRMAAKQMEKIKAKEKLKRRRQIEAINGAWAMIGLTAGLVIEGQTGKG 120

Query: 121 ILAQLTDYFNTVVHVFVR 139
           ILAQLTDYFNTVVHVFVR
Sbjct: 121 ILAQLTDYFNTVVHVFVR 138

[Close]
BLAST of Moc08g39960 vs. NCBI nr
Match: XP_023538319.1 (uncharacterized protein LOC111799137 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 219.2 bits (557), Expect = 2.3e-53
Identity = 113/142 (79.58%), Postives = 120/142 (84.51%), Query Frame = 0 

Query: 1   MASTAL----SSQYLSFRHAHPPATFSRWGWNRDQGGGKITHRTRGQAFRILANPNVSPG 60
           MASTAL        LSFRH HP ATFSRWGWNRDQ  GK THRTRGQAFRILANPNVSPG
Sbjct: 1   MASTALILPIHGGNLSFRHTHPSATFSRWGWNRDQDVGKSTHRTRGQAFRILANPNVSPG 60

Query: 61  KDGFVKEVIMVDPLEAKRMAAKQMEKIKAKEKLKRRRQIEAINGAWAMIGLTAGLVIEGQ 120
           KD  +K+VIMVDPLEAKR+AAK+MEKIKAKEK KRRRQIEAINGAWAMIGLTAGL++EGQ
Sbjct: 61  KDNLIKQVIMVDPLEAKRLAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLIVEGQ 120

Query: 121 TGKGILAQLTDYFNTVVHVFVR 139
           TGKGILAQL  Y   VV+ FVR
Sbjct: 121 TGKGILAQLAGYLAAVVNFFVR 142

[Close]
BLAST of Moc08g39960 vs. NCBI nr
Match: XP_022937783.1 (uncharacterized protein LOC111444076 isoform X1 [Cucurbita moschata] >XP_022937784.1 uncharacterized protein LOC111444076 isoform X1 [Cucurbita moschata] >KAG6586074.1 hypothetical protein SDJN03_18807, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020898.1 hypothetical protein SDJN02_17586 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 218.4 bits (555), Expect = 3.9e-53
Identity = 113/142 (79.58%), Postives = 120/142 (84.51%), Query Frame = 0 

Query: 1   MASTAL----SSQYLSFRHAHPPATFSRWGWNRDQGGGKITHRTRGQAFRILANPNVSPG 60
           MASTAL        LSFRH HP ATFSRWGWNRDQ  GK THRTRGQAFRILANPNVSPG
Sbjct: 1   MASTALILPIHGGNLSFRHTHPSATFSRWGWNRDQDVGKSTHRTRGQAFRILANPNVSPG 60

Query: 61  KDGFVKEVIMVDPLEAKRMAAKQMEKIKAKEKLKRRRQIEAINGAWAMIGLTAGLVIEGQ 120
           KD  +K+VIMVDPLEAKR+AAK+MEKIKAKEK KRRRQIEAINGAWAMIGLTAGL++EGQ
Sbjct: 61  KDDLIKKVIMVDPLEAKRLAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLIVEGQ 120

Query: 121 TGKGILAQLTDYFNTVVHVFVR 139
           TGKGILAQL  Y   VV+ FVR
Sbjct: 121 TGKGILAQLAGYLAAVVNFFVR 142

[Close]
BLAST of Moc08g39960 vs. NCBI nr
Match: XP_022969695.1 (uncharacterized protein LOC111468645 isoform X1 [Cucurbita maxima])

HSP 1 Score: 213.8 bits (543), Expect = 9.5e-52
Identity = 112/148 (75.68%), Postives = 121/148 (81.76%), Query Frame = 0 

Query: 1   MASTAL----------SSQYLSFRHAHPPATFSRWGWNRDQGGGKITHRTRGQAFRILAN 60
           MASTAL          SSQ LSFRH H  ATFSRWGW+RD+  G  THRTRGQAFRILAN
Sbjct: 1   MASTALILPIHGGNRTSSQCLSFRHTHSSATFSRWGWSRDRDVGNSTHRTRGQAFRILAN 60

Query: 61  PNVSPGKDGFVKEVIMVDPLEAKRMAAKQMEKIKAKEKLKRRRQIEAINGAWAMIGLTAG 120
           PNVSPGKD  +K+VIMVDPLEAKR+AAK+MEKIKAKEK KRRRQIEAINGAWAMIGLTAG
Sbjct: 61  PNVSPGKDDLIKKVIMVDPLEAKRLAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAG 120

Query: 121 LVIEGQTGKGILAQLTDYFNTVVHVFVR 139
           L++EGQTGKGILAQL  Y   VV+ FVR
Sbjct: 121 LIVEGQTGKGILAQLAGYLAAVVNFFVR 148

[Close]
BLAST of Moc08g39960 vs. NCBI nr
Match: XP_008451793.1 (PREDICTED: uncharacterized protein LOC103492970 isoform X1 [Cucumis melo] >XP_008451800.1 PREDICTED: uncharacterized protein LOC103492970 isoform X1 [Cucumis melo] >XP_008451808.1 PREDICTED: uncharacterized protein LOC103492970 isoform X1 [Cucumis melo])

HSP 1 Score: 207.6 bits (527), Expect = 6.8e-50
Identity = 105/131 (80.15%), Postives = 116/131 (88.55%), Query Frame = 0 

Query: 8   SQYLSFRHAHPPATFSRWGWNRDQGGGKITHRTRGQAFRILANPNVSPGKDGFVKEVIMV 67
           SQYLSFRH+HP ATFSR GW+RDQ  G+ THRTRGQAFRI    NVSP KDG +K+VIMV
Sbjct: 41  SQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRI---SNVSPAKDGLIKQVIMV 100

Query: 68  DPLEAKRMAAKQMEKIKAKEKLKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLTD 127
           DPLEAKRMAAK+MEKIKAKEK KRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQL D
Sbjct: 101 DPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLAD 160

Query: 128 YFNTVVHVFVR 139
           YF+ +++ F+R
Sbjct: 161 YFSILINFFIR 168

[Close]
BLAST of Moc08g39960 vs. ExPASy TrEMBL
Match: A0A6J1DIT0 (uncharacterized protein LOC111020859 OS=Momordica charantia OX=3673 GN=LOC111020859 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.7e-70
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 1   MASTALSSQYLSFRHAHPPATFSRWGWNRDQGGGKITHRTRGQAFRILANPNVSPGKDGF 60
           MASTALSSQYLSFRHAHPPATFSRWGWNRDQGGGKITHRTRGQAFRILANPNVSPGKDGF
Sbjct: 1   MASTALSSQYLSFRHAHPPATFSRWGWNRDQGGGKITHRTRGQAFRILANPNVSPGKDGF 60

Query: 61  VKEVIMVDPLEAKRMAAKQMEKIKAKEKLKRRRQIEAINGAWAMIGLTAGLVIEGQTGKG 120
           VKEVIMVDPLEAKRMAAKQMEKIKAKEKLKRRRQIEAINGAWAMIGLTAGLVIEGQTGKG
Sbjct: 61  VKEVIMVDPLEAKRMAAKQMEKIKAKEKLKRRRQIEAINGAWAMIGLTAGLVIEGQTGKG 120

Query: 121 ILAQLTDYFNTVVHVFVR 139
           ILAQLTDYFNTVVHVFVR
Sbjct: 121 ILAQLTDYFNTVVHVFVR 138

[Close]
BLAST of Moc08g39960 vs. ExPASy TrEMBL
Match: A0A6J1FC77 (uncharacterized protein LOC111444076 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444076 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.9e-53
Identity = 113/142 (79.58%), Postives = 120/142 (84.51%), Query Frame = 0 

Query: 1   MASTAL----SSQYLSFRHAHPPATFSRWGWNRDQGGGKITHRTRGQAFRILANPNVSPG 60
           MASTAL        LSFRH HP ATFSRWGWNRDQ  GK THRTRGQAFRILANPNVSPG
Sbjct: 1   MASTALILPIHGGNLSFRHTHPSATFSRWGWNRDQDVGKSTHRTRGQAFRILANPNVSPG 60

Query: 61  KDGFVKEVIMVDPLEAKRMAAKQMEKIKAKEKLKRRRQIEAINGAWAMIGLTAGLVIEGQ 120
           KD  +K+VIMVDPLEAKR+AAK+MEKIKAKEK KRRRQIEAINGAWAMIGLTAGL++EGQ
Sbjct: 61  KDDLIKKVIMVDPLEAKRLAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLIVEGQ 120

Query: 121 TGKGILAQLTDYFNTVVHVFVR 139
           TGKGILAQL  Y   VV+ FVR
Sbjct: 121 TGKGILAQLAGYLAAVVNFFVR 142

[Close]
BLAST of Moc08g39960 vs. ExPASy TrEMBL
Match: A0A6J1I0N1 (uncharacterized protein LOC111468645 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468645 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.6e-52
Identity = 112/148 (75.68%), Postives = 121/148 (81.76%), Query Frame = 0 

Query: 1   MASTAL----------SSQYLSFRHAHPPATFSRWGWNRDQGGGKITHRTRGQAFRILAN 60
           MASTAL          SSQ LSFRH H  ATFSRWGW+RD+  G  THRTRGQAFRILAN
Sbjct: 1   MASTALILPIHGGNRTSSQCLSFRHTHSSATFSRWGWSRDRDVGNSTHRTRGQAFRILAN 60

Query: 61  PNVSPGKDGFVKEVIMVDPLEAKRMAAKQMEKIKAKEKLKRRRQIEAINGAWAMIGLTAG 120
           PNVSPGKD  +K+VIMVDPLEAKR+AAK+MEKIKAKEK KRRRQIEAINGAWAMIGLTAG
Sbjct: 61  PNVSPGKDDLIKKVIMVDPLEAKRLAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAG 120

Query: 121 LVIEGQTGKGILAQLTDYFNTVVHVFVR 139
           L++EGQTGKGILAQL  Y   VV+ FVR
Sbjct: 121 LIVEGQTGKGILAQLAGYLAAVVNFFVR 148

[Close]
BLAST of Moc08g39960 vs. ExPASy TrEMBL
Match: A0A1S3BSE0 (uncharacterized protein LOC103492970 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492970 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 3.3e-50
Identity = 105/131 (80.15%), Postives = 116/131 (88.55%), Query Frame = 0 

Query: 8   SQYLSFRHAHPPATFSRWGWNRDQGGGKITHRTRGQAFRILANPNVSPGKDGFVKEVIMV 67
           SQYLSFRH+HP ATFSR GW+RDQ  G+ THRTRGQAFRI    NVSP KDG +K+VIMV
Sbjct: 41  SQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRI---SNVSPAKDGLIKQVIMV 100

Query: 68  DPLEAKRMAAKQMEKIKAKEKLKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLTD 127
           DPLEAKRMAAK+MEKIKAKEK KRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQL D
Sbjct: 101 DPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLAD 160

Query: 128 YFNTVVHVFVR 139
           YF+ +++ F+R
Sbjct: 161 YFSILINFFIR 168

[Close]
BLAST of Moc08g39960 vs. ExPASy TrEMBL
Match: A0A6J1FHS7 (uncharacterized protein LOC111444076 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444076 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 5.8e-47
Identity = 103/138 (74.64%), Postives = 114/138 (82.61%), Query Frame = 0 

Query: 1   MASTALSSQYLSFRHAHPPATFSRWGWNRDQGGGKITHRTRGQAFRILANPNVSPGKDGF 60
           M  T+LS+     +H  P +  SRWGWNRDQ  GK THRTRGQAFRILANPNVSPGKD  
Sbjct: 1   MEETSLSAIPTLLQH-FPVSFPSRWGWNRDQDVGKSTHRTRGQAFRILANPNVSPGKDDL 60

Query: 61  VKEVIMVDPLEAKRMAAKQMEKIKAKEKLKRRRQIEAINGAWAMIGLTAGLVIEGQTGKG 120
           +K+VIMVDPLEAKR+AAK+MEKIKAKEK KRRRQIEAINGAWAMIGLTAGL++EGQTGKG
Sbjct: 61  IKKVIMVDPLEAKRLAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLIVEGQTGKG 120

Query: 121 ILAQLTDYFNTVVHVFVR 139
           ILAQL  Y   VV+ FVR
Sbjct: 121 ILAQLAGYLAAVVNFFVR 137

[Close]
BLAST of Moc08g39960 vs. TAIR 10
Match: AT4G28025.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 133.7 bits (335), Expect = 1.2e-31
Identity = 76/127 (59.84%), Postives = 92/127 (72.44%), Query Frame = 0 

Query: 14  RHAHPPATFSRWGWNRDQGGGKITHRTRGQAFRILANPNVS----PGKDGFVKEVIMVDP 73
           R A P ++  + G  R Q    + +R R    R+LANPNVS    PGK    KEVIMVDP
Sbjct: 28  RFAIPSSSLVK-GLRRHQDAKLVGNRARVGVVRVLANPNVSPPPPPGKAKVKKEVIMVDP 87

Query: 74  LEAKRMAAKQMEKIKAKEKLKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLTDYF 133
           LEAKR+A+KQME+IK +EK +RRR+IEAINGAWA+IGL  GLVIE QTGKGILAQL  Y+
Sbjct: 88  LEAKRLASKQMEEIKGREKQQRRREIEAINGAWAIIGLMIGLVIEAQTGKGILAQLAGYW 147

Query: 134 NTVVHVF 137
           + VVH+F
Sbjct: 148 SAVVHLF 153

[Close]
BLAST of Moc08g39960 vs. TAIR 10
Match: AT4G28025.2 (unknown protein. )

HSP 1 Score: 133.7 bits (335), Expect = 1.2e-31
Identity = 82/144 (56.94%), Postives = 96/144 (66.67%), Query Frame = 0 

Query: 1   MASTALSSQYLSFRHAHPPATFS----RWGWNRDQGGGKITHRTRGQAFRILANPNVS-- 60
           M  T+ SS    F      A FS    R G  R Q    + +R R    R+LANPNVS  
Sbjct: 1   MVVTSFSSAPPIFFLPGADAQFSSSNGRKGLRRHQDAKLVGNRARVGVVRVLANPNVSPP 60

Query: 61  --PGKDGFVKEVIMVDPLEAKRMAAKQMEKIKAKEKLKRRRQIEAINGAWAMIGLTAGLV 120
             PGK    KEVIMVDPLEAKR+A+KQME+IK +EK +RRR+IEAINGAWA+IGL  GLV
Sbjct: 61  PPPGKAKVKKEVIMVDPLEAKRLASKQMEEIKGREKQQRRREIEAINGAWAIIGLMIGLV 120

Query: 121 IEGQTGKGILAQLTDYFNTVVHVF 137
           IE QTGKGILAQL  Y++ VVH+F
Sbjct: 121 IEAQTGKGILAQLAGYWSAVVHLF 144

The following BLAST results are available for this feature:
BLAST of Moc08g39960 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022153344.13.5e-70100.00uncharacterized protein LOC111020859 [Momordica charantia][more]
XP_023538319.12.3e-5379.58uncharacterized protein LOC111799137 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022937783.13.9e-5379.58uncharacterized protein LOC111444076 isoform X1 [Cucurbita moschata] >XP_0229377... [more]
XP_022969695.19.5e-5275.68uncharacterized protein LOC111468645 isoform X1 [Cucurbita maxima][more]
XP_008451793.16.8e-5080.15PREDICTED: uncharacterized protein LOC103492970 isoform X1 [Cucumis melo] >XP_00... [more]
BLAST of Moc08g39960 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc08g39960 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DIT01.7e-70100.00uncharacterized protein LOC111020859 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A6J1FC771.9e-5379.58uncharacterized protein LOC111444076 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1I0N14.6e-5275.68uncharacterized protein LOC111468645 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A1S3BSE03.3e-5080.15uncharacterized protein LOC103492970 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1FHS75.8e-4774.64uncharacterized protein LOC111444076 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
BLAST of Moc08g39960 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G28025.11.2e-3159.84unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G28025.21.2e-3156.94unknown protein. [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 18..137
e-value: 3.6E-6
score: 29.0
NoneNo IPR availablePANTHERPTHR37752:SF1OS02G0610700 PROTEINcoord: 7..137
NoneNo IPR availablePANTHERPTHR37752OS02G0610700 PROTEINcoord: 7..137
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 84..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc08g39960.1Moc08g39960.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009507 chloroplast
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009579 thylakoid
molecular_function GO:0046872 metal ion binding