Moc08g39670 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc08g39670
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr8: 30254397 .. 30255059 (-)
RNA-Seq ExpressionMoc08g39670
SyntenyMoc08g39670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAAGTATGAGGGTCGAGGTGAACCTGGCCGAGGTCCGACCTACCGGGAAGCTCGGTGGGGGCTGATGTGAGCTACTGTCAGCGGCGTGATTATCGGGTATAACCGTCGGTCCCGAAATTACCGGGTGTAACCGACGGTCCCGAGATTACTGGGTGTAACCGTCGCGAGATTAGCGGGACTACCACCCATAAGTAGAGGACTTCACTCCAAGATCAGGTACGATGATTTCTGACCTCGAACTAAACTGAGAATCCGACCTATACTGACTTGATCGTCGGAGTGTTCACCTTTTTGTGCAGGTCCGCCCAAGTATTCAGATCGGTTCGGAGGCCGAGTTCGAGCTGCAATCTGAAATACACTGTTGCGCATATCCTTGCATAAACATTTGGCGTCGTCTGTGGGAACGACAATCTAAGTCATCTCAATCCTTTTAAACCAATACGCGAGCGAAAATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGGACTCTAGATGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCAGTGGTGGAGGGGCAAGGTCACGACGGCCTAGCAGCAGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGTCCTACCACTTGCGCACCCAAGGACATCCAAGGCCACCCGTGGCTGA

mRNA sequence

ATGCTAAGTATGAGGGTCGAGGTGAACCTGGCCGAGGTCCGCCCAAGTATTCAGATCGGTTCGGAGGCCGAGTTCGAGCTGCAATCTGAAATACACTGTTGCGCATATCCTTGCATAAACATTTGGCGTCATCGAAGGACTCTAGATGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCAGTGGTGGAGGGGCAAGGTCACGACGGCCTAGCAGCAGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGTCCTACCACTTGCGCACCCAAGGACATCCAAGGCCACCCGTGGCTGA

Coding sequence (CDS)

ATGCTAAGTATGAGGGTCGAGGTGAACCTGGCCGAGGTCCGCCCAAGTATTCAGATCGGTTCGGAGGCCGAGTTCGAGCTGCAATCTGAAATACACTGTTGCGCATATCCTTGCATAAACATTTGGCGTCATCGAAGGACTCTAGATGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCAGTGGTGGAGGGGCAAGGTCACGACGGCCTAGCAGCAGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGTCCTACCACTTGCGCACCCAAGGACATCCAAGGCCACCCGTGGCTGA

Protein sequence

MLSMRVEVNLAEVRPSIQIGSEAEFELQSEIHCCAYPCINIWRHRRTLDASDAHQREVGAAVVEGQGHDGLAAEPLRRSARITAPVLPLAHPRTSKATRG
Homology
[Close]
BLAST of Moc08g39670 vs. NCBI nr
Match: XP_022152854.1 (uncharacterized protein LOC111020479 [Momordica charantia])

HSP 1 Score: 75.5 bits (184), Expect = 2.9e-10
Identity = 38/53 (71.70%), Postives = 41/53 (77.36%), Query Frame = 0 

Query: 45 RRTLDASDAHQREVGAAVVEGQGHDGLAAEPLRRSARITAPVLPLAHPRTSKA 98
          RR L A+  HQREVGA VVEGQGH+ L  EPL RSARIT PVLP AHP+ SKA
Sbjct: 13 RRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHPKPSKA 65

[Close]
BLAST of Moc08g39670 vs. NCBI nr
Match: XP_022159327.1 (uncharacterized protein LOC111025738 [Momordica charantia])

HSP 1 Score: 71.2 bits (173), Expect = 5.5e-09
Identity = 37/56 (66.07%), Postives = 40/56 (71.43%), Query Frame = 0 

Query: 45  RRTLDASDAHQREVGAAVVEGQGHDGLAAEPLRRSARITAPVLPLAHPRTSKATRG 101
           RR L A+D HQREVGA VVEGQ H+GL  EP  RSARIT P L  AHP+  KA RG
Sbjct: 13  RRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHPKPFKANRG 68

[Close]
BLAST of Moc08g39670 vs. ExPASy TrEMBL
Match: A0A6J1DHB3 (uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020479 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.4e-10
Identity = 38/53 (71.70%), Postives = 41/53 (77.36%), Query Frame = 0 

Query: 45 RRTLDASDAHQREVGAAVVEGQGHDGLAAEPLRRSARITAPVLPLAHPRTSKA 98
          RR L A+  HQREVGA VVEGQGH+ L  EPL RSARIT PVLP AHP+ SKA
Sbjct: 13 RRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHPKPSKA 65

[Close]
BLAST of Moc08g39670 vs. ExPASy TrEMBL
Match: A0A6J1DZJ1 (uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025738 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.7e-09
Identity = 37/56 (66.07%), Postives = 40/56 (71.43%), Query Frame = 0 

Query: 45  RRTLDASDAHQREVGAAVVEGQGHDGLAAEPLRRSARITAPVLPLAHPRTSKATRG 101
           RR L A+D HQREVGA VVEGQ H+GL  EP  RSARIT P L  AHP+  KA RG
Sbjct: 13  RRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHPKPFKANRG 68

The following BLAST results are available for this feature:
BLAST of Moc08g39670 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022152854.12.9e-1071.70uncharacterized protein LOC111020479 [Momordica charantia][more]
XP_022159327.15.5e-0966.07uncharacterized protein LOC111025738 [Momordica charantia][more]
BLAST of Moc08g39670 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc08g39670 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DHB31.4e-1071.70uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A6J1DZJ12.7e-0966.07uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
BLAST of Moc08g39670 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc08g39670.1Moc08g39670.1mRNA