Moc08g39540 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g39540
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribonuclease H
Location	chr8: 30122478 .. 30124849 (-)
RNA-Seq Expression	Moc08g39540
Synteny	Moc08g39540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCAAAGACAACCTGCGGAGGAGGAGTGGCTGAGATCACTGAAAACAATCCTTGCTGTTCGGCCCTGTGCTGAGACACAGACACACTCCTCATTTTGCCCCATTCATCCTCTGTCCAATACCCTTTTCTTACTATCTTCACACCCACCTGCCATTTCAACGTTCGGGTTTAAATCTTATTTTGGTCCGTCCTACTCGAAGAGTAATAATTATTTTTGTTTTAGTTTAAATCTCATTTTCATCCCTCAACTTTCAAGATTACTTTCAAAACGATCATATATCTTAAGAGATGATCATTTTAGTCCCTATATTTGCGAAATCCTAACACAATTGCTAGCTATACATAACAAAAATCCTTTAATACAAAGCTACGAGAATCAGATGAGATTAATTGGTCATGAACCTTATAGGTCTTAGGTCAGAATCTACCCAATTGGAAGTTTGTGAACACCCAACATTTAAGCAAGCACTCGCCCTAATTGTAATTTAAGGATATGGCTATTGGTGGTCAAAAATCAAGTCACCATGTGTAGACATTCTTAGTTCGAGACATCACAAATTGACGTCAGAAACCAAACCTCGATATCGAGCTGAGCCAAGGATATGATCCAAACCAACCTGAGGACTCCGACCTCAGGCCCGACCGTCGACTTGGGGACCCGACAGACATAACAGTATGTCGTAACCAACTAACTGCCCTGTCTCTCCCAGCCTGTCTATAAAAGGGACATTCCACCCACGAGTCAGATATGCAATTTTCTCTGAGAACGACCTTAGACTTCTGAGCTTGTATTAACTTGGGCGTCGGAGTGTCTGATCTTTGTGCAGGTTCACTTGCGAGCACCTCGGAGTGTCGTCCACGTCAGTTCATCACCGATGTGCAAGTTCGGTCGGAAAGTAGCATCAACATTTGGCGCCGTCTATGGGAACCGGCATGACAATAAGCTTTTTGCTCTAAGAATGGCTGAAGGCAACGGTTCCCATTCTGGAAGTAACGAGAATGACAATGGAGATCGCGACCTGCCTAATGGCAGGCGGGGAAGGGATGATCACCCACCACTACCAAGGAAACCGAAGACTTGTTTGACACTTGTAAAACGAAGTCCACTCTGGTGGAGTTGCCATCGTCCGAGCAGATGCAATCACAACTGGCAGACATGCAAGCTCGCTTGGAAGCCATGACCTAAGCGCTGCTGAATCTCGAGGTCCCGTTACCTGAGATTCAGCGTGACCCAAAGAAGGGAAAGGAGAAGGTGGACGACCACTCCCAGAAGAAGAGAGCTGAGGAGCTGATTTCGAAGCTAGTTTTAGGGGCAATAACCTGCCAAGAACGGGAGACTACCGACCTGAGCTCTCCCTGCAACCCTCCAAGGTAGACGGGCAAAGCAAGACGCGAGGTCCAAAGCTCGGGGGCCTCGAAAGAGAGCTTCCGGAAGAATCTATAGGCAACGTGAGCTTGCAGCTGCAGTTTGACTAGCTGAGAAGAGAGTTGGTCAGCGAGTTAAAGGGAAACTTGAAGAAAGTTGTGAGAGCTACAGAGGATGATGAACCTGACGAACCGCCCTTCGTCCAAGACATCTTAGATGCCCCCATCTCGCAGAAGAGCGGATTTCCAACCTTCAACAAATACGATGGGACGAAGGATCCCGTCGACCATGTGGAGACCTACGAGTTCATCATGGACTTTCACGCGTACTCAGATGCGATGAAGTGCAGAGCTCTCTCTATAACTCTGCAGGGGCCAGCAAGGAAGTGGTTTAGACTTTTGGCTTCCTACTCGATCTCGAGCTTGAAACAGCTTAGAAAGGCTTTCATAGCCCAGTTTGCAGCCCACAAGGACGCGAAACACTCAGACACGTATCTCTTCTCGATCTGACAGAAGCCAAAAGAACCTATTAGGGATTACATTAAGCGCTTCCTCTCAGAACAGATCAAGGTTGAGACTTGCACTGACCTACTAGCTCGGTCCGCCTTTTGCAATGGCGTGACACATGAGAAGTTAAGTTGGTCACTGGCAAAGAAGCCCGAGTTGACCTTGAAGGGATGCTTGGATAGAGCAACGAAGTTCATCGAGGCCGAGGACATCATGATGTCCAAAGAAGATAAGTATTCAAGGAATGGCTCGCCTTCCAAAATCGAGAAGAATAAGGACAAGAAGAAAAATGGCAACGGAGGAAATGGCAGGGGGAACTCTTTCTGTTAACTTGAGTATGGTCGTCGAGGTGATCAGAAAGTGACAAGCCTCAGAGGTTCAGCACCTTCACGCAACTACAGGTCCCTTTGTCCGAAATCCTGGCCAATATCCAGGATTCAAACTTGGACTTACTGGTAGAGCCAAGGAAGATGCAGAAGGATCCCGAGCAGCGTGA

mRNA sequence

ATGCTTCAAAGACAACCTGCGGAGGAGGAGTGGCTGAGATCACTGAAAACAATCCTTGCTGTTCGGCCCTGTGCTGAGACACAGACACACTCCTCATTTTGCCCCATTCATCCTCTGTCCAATACCCTTTTCTTACTATCTTCACACCCACCTGCCATTTCAACGTTCGGGTTTAAATCTTATTTTGGTCTTAGGTCAGAATCTACCCAATTGGAAGTTTGTGAACACCCAACATTTAAGCAAGCACTCGCCCTAATTAAACCAAACCTCGATATCGAGCTGAGCCAAGGATATGATCCAAACCAACCTGAGGACTCCGACCTCAGGCCCGACCGTCGACTTGGGGACCCGACAGACATAACAGTTCACTTGCGAGCACCTCGGAGTGTCGTCCACGTCAGTTCATCACCGATGTGCAAGTTCGGTCGGAAAGTAGCATCAACATTTGGCGCCGTCTATGGGAACCGGCATGACAATAAGCTTTTTGCTCTAAGAATGGCTGAAGGCAACGGTTCCCATTCTGGAAGTAACGAGAATGACAATGGAGATCGCGACCTGCCTAATGGCAGGCGGGGAAGGGATGATCACCCACCACTACCAAGGAAACCGAAGACTTGTTTGACACTTCGTGACCCAAAGAAGGGAAAGGAGAAGGTGGACGACCACTCCCAGAAGAAGAGAGCTGAGGAGCTGATTTCGAAGCTAGTTTTAGGGGCAATAACCTGCCAAGAACGGGAGACTACCGACCTGAGCTCTCCCTGCAACCCTCCAAGCGAGTTAAAGGGAAACTTGAAGAAAGTTGTGAGAGCTACAGAGGATGATGAACCTGACGAACCGCCCTTCGTCCAAGACATCTTAGATGCCCCCATCTCGCAGAAGAGCGGATTTCCAACCTTCAACAAATACGATGGGACGAAGGATCCCGTCGACCATGTGGAGACCTACGAGTTCATCATGGACTTTCACGCGTACTCAGATGCGATGAAGTGCAGAGCTCTCTCTATAACTCTGCAGGGGCCAGCAAGGAAGTGGTTTAGACTTTTGGCTTCCTACTCGATCTCGAGCTTGAAACAGCTTAGAAAGGCTTTCATAGCCCAGGATTACATTAAGCGCTTCCTCTCAGAACAGATCAAGGTTGAGACTTGCACTGACCTACTAGCTCGGTCCGCCTTTTGCAATGGCGTGACACATGAGAAGTTAAGTTGGTCACTGGCAAAGAAGCCCGAGTTGACCTTGAAGGGATGCTTGGATAGAGCAACGAAGTTCATCGAGGCCGAGGACATCATGATGTCCAAAGAAGATAAGTATTCAAGGAATGGCTCGCCTTCCAAAATCGAGAAGAATAAGGACAAGAAGAAAAATGGCAACGGAGGAAATGGCAGGGGGAACTCTTTCTGTCCCTTTGTCCGAAATCCTGGCCAATATCCAGGATTCAAACTTGGACTTACTGGTAGAGCCAAGGAAGATGCAGAAGGATCCCGAGCAGCGTGA

Coding sequence (CDS)

ATGCTTCAAAGACAACCTGCGGAGGAGGAGTGGCTGAGATCACTGAAAACAATCCTTGCTGTTCGGCCCTGTGCTGAGACACAGACACACTCCTCATTTTGCCCCATTCATCCTCTGTCCAATACCCTTTTCTTACTATCTTCACACCCACCTGCCATTTCAACGTTCGGGTTTAAATCTTATTTTGGTCTTAGGTCAGAATCTACCCAATTGGAAGTTTGTGAACACCCAACATTTAAGCAAGCACTCGCCCTAATTAAACCAAACCTCGATATCGAGCTGAGCCAAGGATATGATCCAAACCAACCTGAGGACTCCGACCTCAGGCCCGACCGTCGACTTGGGGACCCGACAGACATAACAGTTCACTTGCGAGCACCTCGGAGTGTCGTCCACGTCAGTTCATCACCGATGTGCAAGTTCGGTCGGAAAGTAGCATCAACATTTGGCGCCGTCTATGGGAACCGGCATGACAATAAGCTTTTTGCTCTAAGAATGGCTGAAGGCAACGGTTCCCATTCTGGAAGTAACGAGAATGACAATGGAGATCGCGACCTGCCTAATGGCAGGCGGGGAAGGGATGATCACCCACCACTACCAAGGAAACCGAAGACTTGTTTGACACTTCGTGACCCAAAGAAGGGAAAGGAGAAGGTGGACGACCACTCCCAGAAGAAGAGAGCTGAGGAGCTGATTTCGAAGCTAGTTTTAGGGGCAATAACCTGCCAAGAACGGGAGACTACCGACCTGAGCTCTCCCTGCAACCCTCCAAGCGAGTTAAAGGGAAACTTGAAGAAAGTTGTGAGAGCTACAGAGGATGATGAACCTGACGAACCGCCCTTCGTCCAAGACATCTTAGATGCCCCCATCTCGCAGAAGAGCGGATTTCCAACCTTCAACAAATACGATGGGACGAAGGATCCCGTCGACCATGTGGAGACCTACGAGTTCATCATGGACTTTCACGCGTACTCAGATGCGATGAAGTGCAGAGCTCTCTCTATAACTCTGCAGGGGCCAGCAAGGAAGTGGTTTAGACTTTTGGCTTCCTACTCGATCTCGAGCTTGAAACAGCTTAGAAAGGCTTTCATAGCCCAGGATTACATTAAGCGCTTCCTCTCAGAACAGATCAAGGTTGAGACTTGCACTGACCTACTAGCTCGGTCCGCCTTTTGCAATGGCGTGACACATGAGAAGTTAAGTTGGTCACTGGCAAAGAAGCCCGAGTTGACCTTGAAGGGATGCTTGGATAGAGCAACGAAGTTCATCGAGGCCGAGGACATCATGATGTCCAAAGAAGATAAGTATTCAAGGAATGGCTCGCCTTCCAAAATCGAGAAGAATAAGGACAAGAAGAAAAATGGCAACGGAGGAAATGGCAGGGGGAACTCTTTCTGTCCCTTTGTCCGAAATCCTGGCCAATATCCAGGATTCAAACTTGGACTTACTGGTAGAGCCAAGGAAGATGCAGAAGGATCCCGAGCAGCGTGA

Protein sequence

MLQRQPAEEEWLRSLKTILAVRPCAETQTHSSFCPIHPLSNTLFLLSSHPPAISTFGFKSYFGLRSESTQLEVCEHPTFKQALALIKPNLDIELSQGYDPNQPEDSDLRPDRRLGDPTDITVHLRAPRSVVHVSSSPMCKFGRKVASTFGAVYGNRHDNKLFALRMAEGNGSHSGSNENDNGDRDLPNGRRGRDDHPPLPRKPKTCLTLRDPKKGKEKVDDHSQKKRAEELISKLVLGAITCQERETTDLSSPCNPPSELKGNLKKVVRATEDDEPDEPPFVQDILDAPISQKSGFPTFNKYDGTKDPVDHVETYEFIMDFHAYSDAMKCRALSITLQGPARKWFRLLASYSISSLKQLRKAFIAQDYIKRFLSEQIKVETCTDLLARSAFCNGVTHEKLSWSLAKKPELTLKGCLDRATKFIEAEDIMMSKEDKYSRNGSPSKIEKNKDKKKNGNGGNGRGNSFCPFVRNPGQYPGFKLGLTGRAKEDAEGSRAA

Homology

[Close]

BLAST of Moc08g39540 vs. NCBI nr
Match: XP_022149836.1 (uncharacterized protein LOC111018172 [Momordica charantia])

HSP 1 Score: 535.8 bits (1379), Expect = 3.9e-148
Identity = 284/341 (83.28%), Postives = 285/341 (83.58%), Query Frame = 0


Query: 138 MCKFGRKVASTFGAVYGNRHDNKLFALRMAEGNGSHSGSNENDNGDRDLPNGRRGRDDHP 197
           MCKFGRKVASTFGAVYGNRHDNKLFALRMAEGNGSHSGSNENDNGDRDLPNGRRGRDDHP
Sbjct: 1   MCKFGRKVASTFGAVYGNRHDNKLFALRMAEGNGSHSGSNENDNGDRDLPNGRRGRDDHP 60

Query: 198 PLPRKPKTCLTLRDPKKGKEKVDDHSQKKRAEELISKLVLGAITCQERETTDLSSPCNPP 257
           PLPRKPKTCLTL                     L  +LV                     
Sbjct: 61  PLPRKPKTCLTL---------------------LRRELV--------------------- 120

Query: 258 SELKGNLKKVVRATEDDEPDEPPFVQDILDAPISQKSGFPTFNKYDGTKDPVDHVETYEF 317
           SELKGNLKKVVRATEDDEPDEPPFVQDILDAPISQKSGFPTFNKYDGTKDPVDHVETYEF
Sbjct: 121 SELKGNLKKVVRATEDDEPDEPPFVQDILDAPISQKSGFPTFNKYDGTKDPVDHVETYEF 180

Query: 318 IMDFHAYSDAMKCRALSITLQGPARKWFRLLASYSISSLKQLRKAFIAQ----------- 377
           IMDFHAYSDAMKCRALSITLQGPARKWFRLLASYSISSLKQLRKAFIAQ           
Sbjct: 181 IMDFHAYSDAMKCRALSITLQGPARKWFRLLASYSISSLKQLRKAFIAQFAAHKDAKHSD 240

Query: 378 -DYIKRFLSEQIKVETCTDLLARSAFCNGVTHEKLSWSLAKKPELTLKGCLDRATKFIEA 437
            DYIKRFLSEQIKVETCTDLLARSAFCNGVTHEKLSWSLAKKPELTLKGCLDRATKFIEA
Sbjct: 241 TDYIKRFLSEQIKVETCTDLLARSAFCNGVTHEKLSWSLAKKPELTLKGCLDRATKFIEA 299

Query: 438 EDIMMSKEDKYSRNGSPSKIEKNKDKKKNGNGGNGRGNSFC 467
           EDIMMSKEDKYSRNGSPSKIEKNKDKKKNGNGGNGRGNSFC
Sbjct: 301 EDIMMSKEDKYSRNGSPSKIEKNKDKKKNGNGGNGRGNSFC 299

[Close]

BLAST of Moc08g39540 vs. NCBI nr
Match: XP_022159250.1 (uncharacterized protein LOC111025663 [Momordica charantia])

HSP 1 Score: 132.5 bits (332), Expect = 1.0e-26
Identity = 82/231 (35.50%), Postives = 121/231 (52.38%), Query Frame = 0


Query: 260 LKGNLKKVVRATEDDEPDEPPFVQDILDAPISQKSGFPTFNKYDGTKDPVDHVETYEFIM 319
           LK   +K   + +D +  E PF  DIL+API  K   PT   YDG+KDP D+VE +E +M
Sbjct: 12  LKARCEKKECSFDDGDLGESPFTSDILEAPIPPKFKTPTMKPYDGSKDPKDYVEVFEGLM 71

Query: 320 DFHAYSDAMKCRALSITLQGPARKWFRLLASYSISSLKQLRKAFIAQ------------- 379
           DF A +DA+KCRA  I L   AR W+R L + SIS+  QLRK FI+Q             
Sbjct: 72  DFQAATDAIKCRAFQIALTDSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATH 131

Query: 380 -------------DYIKRFLSEQIKVETCTDLLARSAFCNGVTHEKLSWSLAKKPELTLK 439
                        +Y+ RFL EQ+KV  C+D  A   F  G+  E L+  L ++   T  
Sbjct: 132 LATIRQKEGETLREYVTRFLEEQLKVAHCSDDSAMCYFLTGLADENLTVKLGEEAPATFA 191

Query: 440 GCLDRATKFIEAEDIMMSKEDKYSRNGSPSKIEKNKDKKKNGNGGNGRGNS 465
             L +A K I+ ++++ +K D+  +     K+  N++K+K  +    +G+S
Sbjct: 192 EVLQKAKKVIDGQELLQTKTDRPEKQIDQKKL--NQEKRKADSKSKDKGSS 240

[Close]

BLAST of Moc08g39540 vs. NCBI nr
Match: XP_022156542.1 (uncharacterized protein LOC111023421 [Momordica charantia])

HSP 1 Score: 127.9 bits (320), Expect = 2.5e-25
Identity = 84/233 (36.05%), Postives = 118/233 (50.64%), Query Frame = 0


Query: 260 LKGNLKKVVRATEDDEPDEPPFVQDILDAPISQKSGFPTFNKYDGTKDPVDHVETYEFIM 319
           LK   ++   +  D +  E PF  D+L+API  K   PT   YDGTKDP D+VE +E +M
Sbjct: 47  LKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLM 106

Query: 320 DFHAYSDAMKCRALSITLQGPARKWFRLLASYSISSLKQLRKAFIAQ------------- 379
           DF A SDA+KCRA  I L G AR W+R L   SIS+  QLR+ F+AQ             
Sbjct: 107 DFQAASDAIKCRAFQIALTGSARLWYRRLPXRSISTYSQLRREFLAQFSSRHYDKKTATH 166

Query: 380 -------------DYIKRFLSEQIKVETCTDLLARSAFCNGVTHEKLSWSLAKKPELTLK 439
                        +Y+ RF  EQ+KV  C+D  A   F  G+  E L+  L ++   T  
Sbjct: 167 LATIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTGLADEALTVKLGEEAPATFA 226

Query: 440 GCLDRATKFIEAEDIMMSK----EDKYSRNGSPSKIEKNKDKKKN-GNGGNGR 462
             L +A K I+ ++++ +K    E K  R  S   +E+   K K+ G+  +GR
Sbjct: 227 EVLQKAKKVIDGQELLRTKTGRPERKIGRGRSGKDVERADPKSKDKGSFSSGR 279

[Close]

BLAST of Moc08g39540 vs. NCBI nr
Match: XP_022141796.1 (uncharacterized protein LOC111012081 [Momordica charantia])

HSP 1 Score: 127.9 bits (320), Expect = 2.5e-25
Identity = 85/233 (36.48%), Postives = 117/233 (50.21%), Query Frame = 0


Query: 260 LKGNLKKVVRATEDDEPDEPPFVQDILDAPISQKSGFPTFNKYDGTKDPVDHVETYEFIM 319
           LK   ++      D +  E PF  D+L+API  K   PT   YDG+KDP D+VE +E +M
Sbjct: 21  LKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGLM 80

Query: 320 DFHAYSDAMKCRALSITLQGPARKWFRLLASYSISSLKQLRKAFIAQ------------- 379
           DF A SDA+KCRA  I L G AR W+R L + SIS+  QLR+ F+AQ             
Sbjct: 81  DFQATSDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATH 140

Query: 380 -------------DYIKRFLSEQIKVETCTDLLARSAFCNGVTHEKLSWSLAKKPELTLK 439
                        +Y+ RF  EQ+KV  C+D  A   F  G+  E L+  L ++   T  
Sbjct: 141 LATIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTGLADEALTVKLGEEAPSTFT 200

Query: 440 GCLDRATKFIEAEDIMMSK----EDKYSRNGSPSKIEKNKDKKKN-GNGGNGR 462
             L +  K I+  +++ +K    E K SR  S   IEK   K K+ G+  +GR
Sbjct: 201 EVLQKTKKVIDGHELLRTKTGRPERKISRGRSGKDIEKTDPKSKDKGSFSSGR 253

[Close]

BLAST of Moc08g39540 vs. NCBI nr
Match: XP_022150613.1 (uncharacterized protein LOC111018708, partial [Momordica charantia])

HSP 1 Score: 125.6 bits (314), Expect = 1.2e-24
Identity = 81/220 (36.82%), Postives = 114/220 (51.82%), Query Frame = 0


Query: 273 DDEPDEPPFVQDILDAPISQKSGFPTFNKYDGTKDPVDHVETYEFIMDFHAYSDAMKCRA 332
           D +  E  F  D+L+API  K   PT   YDG+KDP D+VE +E +MDFHA SDA+KCRA
Sbjct: 50  DGDLGESSFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGLMDFHAASDAIKCRA 109

Query: 333 LSITLQGPARKWFRLLASYSISSLKQLRKAFIAQ-------------------------- 392
             I L G AR W+R L + SIS+  QLR+ F+AQ                          
Sbjct: 110 FQIALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRQYGKKTETHLATIRQKEGGTLR 169

Query: 393 DYIKRFLSEQIKVETCTDLLARSAFCNGVTHEKLSWSLAKKPELTLKGCLDRATKFIEAE 452
           +Y+ RF  EQ+KV  C+D  A   F  G+  E L+  L +K   T    L +A K I+ +
Sbjct: 170 EYVTRFQEEQLKVAHCSDDSAMCYFLTGLADEALTVKLGEKAPTTFAEVLQKAKKVIDGQ 229

Query: 453 DIMMSK----EDKYSRNGSPSKIEKNKDKKKN-GNGGNGR 462
           +++ +K    + K  R  S   +E+   K K+ G+  +GR
Sbjct: 230 ELLRTKTGRPDRKIGRGRSGKDVERADPKSKDKGSFSSGR 269

[Close]

BLAST of Moc08g39540 vs. ExPASy TrEMBL
Match: A0A6J1D9M1 (uncharacterized protein LOC111018172 OS=Momordica charantia OX=3673 GN=LOC111018172 PE=4 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 1.9e-148
Identity = 284/341 (83.28%), Postives = 285/341 (83.58%), Query Frame = 0


Query: 138 MCKFGRKVASTFGAVYGNRHDNKLFALRMAEGNGSHSGSNENDNGDRDLPNGRRGRDDHP 197
           MCKFGRKVASTFGAVYGNRHDNKLFALRMAEGNGSHSGSNENDNGDRDLPNGRRGRDDHP
Sbjct: 1   MCKFGRKVASTFGAVYGNRHDNKLFALRMAEGNGSHSGSNENDNGDRDLPNGRRGRDDHP 60

Query: 198 PLPRKPKTCLTLRDPKKGKEKVDDHSQKKRAEELISKLVLGAITCQERETTDLSSPCNPP 257
           PLPRKPKTCLTL                     L  +LV                     
Sbjct: 61  PLPRKPKTCLTL---------------------LRRELV--------------------- 120

Query: 258 SELKGNLKKVVRATEDDEPDEPPFVQDILDAPISQKSGFPTFNKYDGTKDPVDHVETYEF 317
           SELKGNLKKVVRATEDDEPDEPPFVQDILDAPISQKSGFPTFNKYDGTKDPVDHVETYEF
Sbjct: 121 SELKGNLKKVVRATEDDEPDEPPFVQDILDAPISQKSGFPTFNKYDGTKDPVDHVETYEF 180

Query: 318 IMDFHAYSDAMKCRALSITLQGPARKWFRLLASYSISSLKQLRKAFIAQ----------- 377
           IMDFHAYSDAMKCRALSITLQGPARKWFRLLASYSISSLKQLRKAFIAQ           
Sbjct: 181 IMDFHAYSDAMKCRALSITLQGPARKWFRLLASYSISSLKQLRKAFIAQFAAHKDAKHSD 240

Query: 378 -DYIKRFLSEQIKVETCTDLLARSAFCNGVTHEKLSWSLAKKPELTLKGCLDRATKFIEA 437
            DYIKRFLSEQIKVETCTDLLARSAFCNGVTHEKLSWSLAKKPELTLKGCLDRATKFIEA
Sbjct: 241 TDYIKRFLSEQIKVETCTDLLARSAFCNGVTHEKLSWSLAKKPELTLKGCLDRATKFIEA 299

Query: 438 EDIMMSKEDKYSRNGSPSKIEKNKDKKKNGNGGNGRGNSFC 467
           EDIMMSKEDKYSRNGSPSKIEKNKDKKKNGNGGNGRGNSFC
Sbjct: 301 EDIMMSKEDKYSRNGSPSKIEKNKDKKKNGNGGNGRGNSFC 299

[Close]

BLAST of Moc08g39540 vs. ExPASy TrEMBL
Match: A0A6J1DY58 (uncharacterized protein LOC111025663 OS=Momordica charantia OX=3673 GN=LOC111025663 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 4.9e-27
Identity = 82/231 (35.50%), Postives = 121/231 (52.38%), Query Frame = 0


Query: 260 LKGNLKKVVRATEDDEPDEPPFVQDILDAPISQKSGFPTFNKYDGTKDPVDHVETYEFIM 319
           LK   +K   + +D +  E PF  DIL+API  K   PT   YDG+KDP D+VE +E +M
Sbjct: 12  LKARCEKKECSFDDGDLGESPFTSDILEAPIPPKFKTPTMKPYDGSKDPKDYVEVFEGLM 71

Query: 320 DFHAYSDAMKCRALSITLQGPARKWFRLLASYSISSLKQLRKAFIAQ------------- 379
           DF A +DA+KCRA  I L   AR W+R L + SIS+  QLRK FI+Q             
Sbjct: 72  DFQAATDAIKCRAFQIALTDSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATH 131

Query: 380 -------------DYIKRFLSEQIKVETCTDLLARSAFCNGVTHEKLSWSLAKKPELTLK 439
                        +Y+ RFL EQ+KV  C+D  A   F  G+  E L+  L ++   T  
Sbjct: 132 LATIRQKEGETLREYVTRFLEEQLKVAHCSDDSAMCYFLTGLADENLTVKLGEEAPATFA 191

Query: 440 GCLDRATKFIEAEDIMMSKEDKYSRNGSPSKIEKNKDKKKNGNGGNGRGNS 465
             L +A K I+ ++++ +K D+  +     K+  N++K+K  +    +G+S
Sbjct: 192 EVLQKAKKVIDGQELLQTKTDRPEKQIDQKKL--NQEKRKADSKSKDKGSS 240

[Close]

BLAST of Moc08g39540 vs. ExPASy TrEMBL
Match: A0A6J1DS95 (uncharacterized protein LOC111023421 OS=Momordica charantia OX=3673 GN=LOC111023421 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.2e-25
Identity = 84/233 (36.05%), Postives = 118/233 (50.64%), Query Frame = 0


Query: 260 LKGNLKKVVRATEDDEPDEPPFVQDILDAPISQKSGFPTFNKYDGTKDPVDHVETYEFIM 319
           LK   ++   +  D +  E PF  D+L+API  K   PT   YDGTKDP D+VE +E +M
Sbjct: 47  LKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLM 106

Query: 320 DFHAYSDAMKCRALSITLQGPARKWFRLLASYSISSLKQLRKAFIAQ------------- 379
           DF A SDA+KCRA  I L G AR W+R L   SIS+  QLR+ F+AQ             
Sbjct: 107 DFQAASDAIKCRAFQIALTGSARLWYRRLPXRSISTYSQLRREFLAQFSSRHYDKKTATH 166

Query: 380 -------------DYIKRFLSEQIKVETCTDLLARSAFCNGVTHEKLSWSLAKKPELTLK 439
                        +Y+ RF  EQ+KV  C+D  A   F  G+  E L+  L ++   T  
Sbjct: 167 LATIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTGLADEALTVKLGEEAPATFA 226

Query: 440 GCLDRATKFIEAEDIMMSK----EDKYSRNGSPSKIEKNKDKKKN-GNGGNGR 462
             L +A K I+ ++++ +K    E K  R  S   +E+   K K+ G+  +GR
Sbjct: 227 EVLQKAKKVIDGQELLRTKTGRPERKIGRGRSGKDVERADPKSKDKGSFSSGR 279

[Close]

BLAST of Moc08g39540 vs. ExPASy TrEMBL
Match: A0A6J1CKB3 (uncharacterized protein LOC111012081 OS=Momordica charantia OX=3673 GN=LOC111012081 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.2e-25
Identity = 85/233 (36.48%), Postives = 117/233 (50.21%), Query Frame = 0


Query: 260 LKGNLKKVVRATEDDEPDEPPFVQDILDAPISQKSGFPTFNKYDGTKDPVDHVETYEFIM 319
           LK   ++      D +  E PF  D+L+API  K   PT   YDG+KDP D+VE +E +M
Sbjct: 21  LKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGLM 80

Query: 320 DFHAYSDAMKCRALSITLQGPARKWFRLLASYSISSLKQLRKAFIAQ------------- 379
           DF A SDA+KCRA  I L G AR W+R L + SIS+  QLR+ F+AQ             
Sbjct: 81  DFQATSDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATH 140

Query: 380 -------------DYIKRFLSEQIKVETCTDLLARSAFCNGVTHEKLSWSLAKKPELTLK 439
                        +Y+ RF  EQ+KV  C+D  A   F  G+  E L+  L ++   T  
Sbjct: 141 LATIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTGLADEALTVKLGEEAPSTFT 200

Query: 440 GCLDRATKFIEAEDIMMSK----EDKYSRNGSPSKIEKNKDKKKN-GNGGNGR 462
             L +  K I+  +++ +K    E K SR  S   IEK   K K+ G+  +GR
Sbjct: 201 EVLQKTKKVIDGHELLRTKTGRPERKISRGRSGKDIEKTDPKSKDKGSFSSGR 253

[Close]

BLAST of Moc08g39540 vs. ExPASy TrEMBL
Match: A0A6J1D9W7 (uncharacterized protein LOC111018708 OS=Momordica charantia OX=3673 GN=LOC111018708 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.9e-25
Identity = 81/220 (36.82%), Postives = 114/220 (51.82%), Query Frame = 0


Query: 273 DDEPDEPPFVQDILDAPISQKSGFPTFNKYDGTKDPVDHVETYEFIMDFHAYSDAMKCRA 332
           D +  E  F  D+L+API  K   PT   YDG+KDP D+VE +E +MDFHA SDA+KCRA
Sbjct: 50  DGDLGESSFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGLMDFHAASDAIKCRA 109

Query: 333 LSITLQGPARKWFRLLASYSISSLKQLRKAFIAQ-------------------------- 392
             I L G AR W+R L + SIS+  QLR+ F+AQ                          
Sbjct: 110 FQIALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRQYGKKTETHLATIRQKEGGTLR 169

Query: 393 DYIKRFLSEQIKVETCTDLLARSAFCNGVTHEKLSWSLAKKPELTLKGCLDRATKFIEAE 452
           +Y+ RF  EQ+KV  C+D  A   F  G+  E L+  L +K   T    L +A K I+ +
Sbjct: 170 EYVTRFQEEQLKVAHCSDDSAMCYFLTGLADEALTVKLGEKAPTTFAEVLQKAKKVIDGQ 229

Query: 453 DIMMSK----EDKYSRNGSPSKIEKNKDKKKN-GNGGNGR 462
           +++ +K    + K  R  S   +E+   K K+ G+  +GR
Sbjct: 230 ELLRTKTGRPDRKIGRGRSGKDVERADPKSKDKGSFSSGR 269

The following BLAST results are available for this feature:

BLAST of Moc08g39540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149836.1	3.9e-148	83.28	uncharacterized protein LOC111018172 [Momordica charantia]	[more]
XP_022159250.1	1.0e-26	35.50	uncharacterized protein LOC111025663 [Momordica charantia]	[more]
XP_022156542.1	2.5e-25	36.05	uncharacterized protein LOC111023421 [Momordica charantia]	[more]
XP_022141796.1	2.5e-25	36.48	uncharacterized protein LOC111012081 [Momordica charantia]	[more]
XP_022150613.1	1.2e-24	36.82	uncharacterized protein LOC111018708, partial [Momordica charantia]	[more]

BLAST of Moc08g39540 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc08g39540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D9M1	1.9e-148	83.28	uncharacterized protein LOC111018172 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1DY58	4.9e-27	35.50	uncharacterized protein LOC111025663 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DS95	1.2e-25	36.05	uncharacterized protein LOC111023421 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1CKB3	1.2e-25	36.48	uncharacterized protein LOC111012081 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1D9W7	5.9e-25	36.82	uncharacterized protein LOC111018708 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of Moc08g39540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 496..496
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 433..456
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 433..496
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g39540.1	Moc08g39540.1	mRNA