Moc08g38500 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g38500
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	transcription factor bHLH14-like
Location	chr8: 28875403 .. 28876060 (-)
RNA-Seq Expression	Moc08g38500
Synteny	Moc08g38500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAAGAAGGGATGAACAAAGGAGCTGGGAATGATCATGCCGAGGCAAAGCGGCGGCGGGAGAAGCTCAACCACCACTTCTCCTCCCTCCGCTCGCTACTCCCCAATGCTTCGAATAGCGACAATAGCGAAGCGGCTGTTCTGTCTGACGCTGTTTCATACATCAACGAGCTCCAAGTCAAGATGGAGGACTTGGAGTCTCATCTAGACGTCAAGAAATCCAATCCAGAGGACGAAGCGACATCGGGAGAAAAAAGAGTGTGATGGAAGTGGAAGTTGAAGTGAAGATTATAGGATTGGATCGGGCAGTGGTGAGAATTCAGACAAAGAATATGAGCTATGCAGTGGCTAGGCTAATGGAGGCCCTTAGAGACTTGGAGTTGAAGGTCCACCATGCCACCATGTGCAACTCAAATGATATCACATTGCAAGATCTGGTCATTGGGCTTCCTCCACAAGTAGAAACCACAGAAGAAGGTATTAAAGCCTCACTTCTCAAAATATTATGCAATAATTAACTACTCTCATTAGGGTACTACACTACTACTAGTTCGAGGAGTTTTTGATTGGGGTTCCCTATGGGGTTAGACTATTTGTGTTAGATTTTGGAGTCTGGTTCTCGAGATATCGTGGAACCCTTCCTCCATCTGGGTGA

mRNA sequence

ATGGAGAAAGAAGGGATGAACAAAGGAGCTGGGAATGATCATGCCGAGGCAAAGCGGCGGCGGGAGAAGCTCAACCACCACTTCTCCTCCCTCCGCTCGCTACTCCCCAATGCTTCGAATAGCGACAATAGCGAAGCGGCTGTTCTGTCTGACGCTGTTTCATACATCAACGAGCTCCAAGTCAAGATGGAGGACTTGGAGTCTCATCTAGACATTATAGGATTGGATCGGGCAGTGGTGAGAATTCAGACAAAGAATATGAGCTATGCAGTGGCTAGGCTAATGGAGGCCCTTAGAGACTTGGAGTTGAAGGTCCACCATGCCACCATGTGCAACTCAAATGATATCACATTGCAAGATCTGGTCATTGGGCTTCCTCCACAAGTAGAAACCACAGAAGAAGATTTTGGAGTCTGGTTCTCGAGATATCGTGGAACCCTTCCTCCATCTGGGTGA

Coding sequence (CDS)

ATGGAGAAAGAAGGGATGAACAAAGGAGCTGGGAATGATCATGCCGAGGCAAAGCGGCGGCGGGAGAAGCTCAACCACCACTTCTCCTCCCTCCGCTCGCTACTCCCCAATGCTTCGAATAGCGACAATAGCGAAGCGGCTGTTCTGTCTGACGCTGTTTCATACATCAACGAGCTCCAAGTCAAGATGGAGGACTTGGAGTCTCATCTAGACATTATAGGATTGGATCGGGCAGTGGTGAGAATTCAGACAAAGAATATGAGCTATGCAGTGGCTAGGCTAATGGAGGCCCTTAGAGACTTGGAGTTGAAGGTCCACCATGCCACCATGTGCAACTCAAATGATATCACATTGCAAGATCTGGTCATTGGGCTTCCTCCACAAGTAGAAACCACAGAAGAAGATTTTGGAGTCTGGTTCTCGAGATATCGTGGAACCCTTCCTCCATCTGGGTGA

Protein sequence

MEKEGMNKGAGNDHAEAKRRREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINELQVKMEDLESHLDIIGLDRAVVRIQTKNMSYAVARLMEALRDLELKVHHATMCNSNDITLQDLVIGLPPQVETTEEDFGVWFSRYRGTLPPSG

Homology

[Close]

BLAST of Moc08g38500 vs. NCBI nr
Match: XP_022144464.1 (transcription factor bHLH14-like [Momordica charantia])

HSP 1 Score: 236.1 bits (601), Expect = 2.0e-58
Identity = 130/156 (83.33%), Postives = 130/156 (83.33%), Query Frame = 0


Query: 6   MNKGAGNDHAEAKRRREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINELQVKMED 65
           MNKGAGNDHAEAKRRREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINELQVKMED
Sbjct: 1   MNKGAGNDHAEAKRRREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINELQVKMED 60

Query: 66  LESHLD--------------------------IIGLDRAVVRIQTKNMSYAVARLMEALR 125
           LESHLD                          IIGLDRAVVRIQTKNMSYAVARLMEALR
Sbjct: 61  LESHLDVKKSNPEDEATSGAKKSVMEVEVEVKIIGLDRAVVRIQTKNMSYAVARLMEALR 120

Query: 126 DLELKVHHATMCNSNDITLQDLVIGLPPQVETTEED 136
           DLELKVHHATMCNSNDITLQDLVIGLPPQVETTEED
Sbjct: 121 DLELKVHHATMCNSNDITLQDLVIGLPPQVETTEED 156

[Close]

BLAST of Moc08g38500 vs. NCBI nr
Match: XP_038890552.1 (transcription factor MYC3-like [Benincasa hispida])

HSP 1 Score: 121.7 bits (304), Expect = 5.4e-24
Identity = 76/157 (48.41%), Postives = 101/157 (64.33%), Query Frame = 0


Query: 2   EKEGMNKGAGND----HAEAKR-RREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYI 61
           E    N  + N+    H EA+R RREKLNH F+SLRS++P+ S  D  +A++LS+A+SYI
Sbjct: 153 ENHNNNNSSSNNNASTHVEAERQRREKLNHRFNSLRSVVPSVSRMD--KASLLSNAISYI 212

Query: 62  NELQVKMEDLESH---------------------------LDIIGLDRAVVRIQTKNMSY 121
           NELQ K+ ++ES                            + IIG D+AV+R+QTKN+SY
Sbjct: 213 NELQKKISEMESRVLKKKGVEEMEEEASSRDEREKVIEIDVKIIGGDQAVIRVQTKNVSY 272

Query: 122 AVARLMEALRDLELKVHHATMCNSNDITLQDLVIGLP 127
           AVA+LMEALRDLELKV HA+M N  D+TLQDLV+ +P
Sbjct: 273 AVAKLMEALRDLELKVRHASMSNLQDLTLQDLVVEIP 307

[Close]

BLAST of Moc08g38500 vs. NCBI nr
Match: XP_022144463.1 (transcription factor bHLH14-like [Momordica charantia])

HSP 1 Score: 119.0 bits (297), Expect = 3.5e-23
Identity = 79/172 (45.93%), Postives = 102/172 (59.30%), Query Frame = 0


Query: 14  HAEAKR-RREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINELQVKMEDL------ 73
           H EA+R RREKLNH F  LRS++PN S  D  +A++LSDAV YI+ELQ K++DL      
Sbjct: 205 HVEAERQRREKLNHQFCCLRSVVPNISRMD--KASLLSDAVLYIHELQAKIKDLEFEFSK 264

Query: 74  ---------------------------ESHLDIIGLDRAVVRIQTKNMSYAVARLMEALR 133
                                      E  + I+GL+ AV+R+QTKNMS  +A+LMEALR
Sbjct: 265 RSNSKESKKAALVNQRRPNGGLIKVEVEVEVKIMGLE-AVIRVQTKNMSNTMAKLMEALR 324

Query: 134 DLELKVHHATMCNSNDITLQDLVIGL-PPQVETTEEDFGVWFSRYRGTLPPS 151
           DLELKVHHA+M N ND TL D+V+GL P Q +T  E+  +  S  +    PS
Sbjct: 325 DLELKVHHASMLNLNDFTLHDVVVGLRPDQKQTNIEEEAIRMSLLKTLHHPS 373

[Close]

BLAST of Moc08g38500 vs. NCBI nr
Match: XP_031736394.1 (transcription factor bHLH14-like [Cucumis sativus] >KGN61317.1 hypothetical protein Csa_005925 [Cucumis sativus])

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-22
Identity = 71/148 (47.97%), Postives = 95/148 (64.19%), Query Frame = 0


Query: 14  HAEAKR-RREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINELQVKMEDLESH--- 73
           H EA+R RREKLN  F+SLRS++PN S  D  +A++LSDAVSYINEL++K+ ++ES    
Sbjct: 148 HVEAERQRREKLNDRFNSLRSVVPNVSRMD--KASLLSDAVSYINELEMKISEMESRVLK 207

Query: 74  -------------------------------LDIIGLDRAVVRIQTKNMSYAVARLMEAL 127
                                          + IIG DRAV+R++++N+SYAVA+LMEAL
Sbjct: 208 EKKEKKNGVDENEMEEEASSRDRRERGIEIDVKIIGGDRAVIRVESRNLSYAVAKLMEAL 267

[Close]

BLAST of Moc08g38500 vs. NCBI nr
Match: XP_022144465.1 (transcription factor MYC4-like [Momordica charantia])

HSP 1 Score: 114.4 bits (285), Expect = 8.6e-22
Identity = 75/153 (49.02%), Postives = 98/153 (64.05%), Query Frame = 0


Query: 1   MEKEGMNKGAGNDHAEAKRRREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINELQ 60
           MEK    K  G D   A RRR      FSSLR+LLPN S +DN+ AAVL  AVSYIN+L+
Sbjct: 1   MEKPAGWKKGGYD---ALRRR---GRPFSSLRALLPNVSEADNA-AAVLFHAVSYINDLR 60

Query: 61  VKMEDLESHL-------------------DIIGLDRAVVRIQTKNMSYAVARLMEALRDL 120
            K++ LES L                   +I+G D+AVVR++T+ + YA AR+MEALRDL
Sbjct: 61  TKIQQLESQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVMEALRDL 120

Query: 121 ELKVHHATMCNSNDITLQDLVIGLPPQVETTEE 135
           ELK+HHAT+ N N++T Q LV+GLP   +TT++
Sbjct: 121 ELKLHHATISNLNNVTCQRLVVGLPSPQQTTQK 146

[Close]

BLAST of Moc08g38500 vs. ExPASy Swiss-Prot
Match: A0A060KY90 (Transcription factor MYC1 OS=Solanum lycopersicum OX=4081 GN=MYC1 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.5e-13
Identity = 53/164 (32.32%), Postives = 85/164 (51.83%), Query Frame = 0


Query: 13  DHAEAKR-RREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINELQ----------- 72
           +H EA+R RREKLN  F +LR+++PN S  D  +A++L DA++YINEL+           
Sbjct: 457 NHVEAERQRREKLNQRFYALRAVVPNVSKMD--KASLLGDAIAYINELKSKVQNSDLDKE 516

Query: 73  ------------------------------VKMEDLESHLDIIGLDRAVVRIQTKNMSYA 132
                                         VK+ D++  + +IG D A++RIQ    ++ 
Sbjct: 517 ELRSQIECLRKELTNKGSSNYSASPPLNQDVKIVDMDIDVKVIGWD-AMIRIQCSKKNHP 576

Query: 133 VARLMEALRDLELKVHHATMCNSNDITLQDLVIGLPPQVETTEE 135
            ARLM AL+DL+L VHHA++   ND+ +Q   + +  ++   E+
Sbjct: 577 AARLMAALKDLDLDVHHASVSVVNDLMIQQATVKMGSRLYAQEQ 617

[Close]

BLAST of Moc08g38500 vs. ExPASy Swiss-Prot
Match: A0A3Q7HRZ6 (Transcription factor MYC2 OS=Solanum lycopersicum OX=4081 GN=MYC2 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 7.6e-13
Identity = 57/167 (34.13%), Postives = 86/167 (51.50%), Query Frame = 0


Query: 13  DHAEAKR-RREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINELQVKM-------E 72
           +H EA+R RREKLN  F +LR+++PN S  D  +A++L DA+SYINEL+ K+       E
Sbjct: 513 NHVEAERQRREKLNQRFYALRAVVPNVSKMD--KASLLGDAISYINELKSKLQNTESDKE 572

Query: 73  DLESHLD-------------------------------------IIGLDRAVVRIQTKNM 132
           DL+S ++                                     IIG D A++RIQ    
Sbjct: 573 DLKSQIEDLKKESRRPGPPPPPNQDLKMSSHTGGKIVDVDIDVKIIGWD-AMIRIQCNKK 632

Query: 133 SYAVARLMEALRDLELKVHHATMCNSNDITLQDLVIGLPPQVETTEE 135
           ++  ARLM AL +L+L VHHA++   ND+ +Q   + +  +  T E+
Sbjct: 633 NHPAARLMAALMELDLDVHHASVSVVNDLMIQQATVKMGSRHYTEEQ 676

[Close]

BLAST of Moc08g38500 vs. ExPASy Swiss-Prot
Match: Q39204 (Transcription factor MYC2 OS=Arabidopsis thaliana OX=3702 GN=MYC2 PE=1 SV=2)

HSP 1 Score: 74.7 bits (182), Expect = 9.9e-13
Identity = 55/165 (33.33%), Postives = 87/165 (52.73%), Query Frame = 0


Query: 13  DHAEAKR-RREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINEL------------ 72
           +H EA+R RREKLN  F +LR+++PN S  D  +A++L DA++YINEL            
Sbjct: 452 NHVEAERQRREKLNQRFYALRAVVPNVSKMD--KASLLGDAIAYINELKSKVVKTESEKL 511

Query: 73  -------QVKME-----------------------DLESHLDIIGLDRAVVRIQTKNMSY 132
                  +VK+E                        +E  + IIG D A++R+++   ++
Sbjct: 512 QIKNQLEEVKLELAGRKASASGGDMSSSCSSIKPVGMEIEVKIIGWD-AMIRVESSKRNH 571

Query: 133 AVARLMEALRDLELKVHHATMCNSNDITLQDLVIGLPPQVETTEE 135
             ARLM AL DLEL+V+HA+M   ND+ +Q   + +  ++ T E+
Sbjct: 572 PAARLMSALMDLELEVNHASMSVVNDLMIQQATVKMGFRIYTQEQ 613

[Close]

BLAST of Moc08g38500 vs. ExPASy Swiss-Prot
Match: Q9LUK7 (Transcription factor bHLH28 OS=Arabidopsis thaliana OX=3702 GN=BHLH28 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.2e-12
Identity = 59/176 (33.52%), Postives = 88/176 (50.00%), Query Frame = 0


Query: 2   EKEGMNKGAGND----HAEAKR-RREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYI 61
           +K G     G D    H EA+R RREKLNH F +LR+++PN S  D  + ++L DAV YI
Sbjct: 328 KKRGRKPAHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMD--KTSLLEDAVCYI 387

Query: 62  NELQVKME--DLESH------------------------------------LDIIGLDRA 121
           NEL+ K E  +LE H                                    + I+  D A
Sbjct: 388 NELKSKAENVELEKHAIEIQFNELKEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESDDA 447

Query: 122 VVRIQTKNMSYAVARLMEALRDLELKVHHATMCNSNDITLQDLVIGLPPQVETTEE 135
           +VR++++   +  ARLM AL DLEL+V+HA++   ND+ +Q   + +  ++   EE
Sbjct: 448 MVRVESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQQANVKMGLRIYKQEE 501

[Close]

BLAST of Moc08g38500 vs. ExPASy Swiss-Prot
Match: O23090 (Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.9e-12
Identity = 49/158 (31.01%), Postives = 82/158 (51.90%), Query Frame = 0


Query: 14  HAEA-KRRREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINELQVKMEDLESHL-- 73
           H EA K+RREKLNH F +LR+++P  S  D  +A++LSDAVSYI  L+ K++DLE+ +  
Sbjct: 250 HVEAEKQRREKLNHRFYALRAIVPKVSRMD--KASLLSDAVSYIESLKSKIDDLETEIKK 309

Query: 74  ------------------------------------------DIIGLDRAVVRIQTKNMS 127
                                                      I+G + A++R+QT+N++
Sbjct: 310 MKMTETDKLDNSSSNTSPSSVEYQVNQKPSKSNRGSDLEVQVKIVG-EEAIIRVQTENVN 369

[Close]

BLAST of Moc08g38500 vs. ExPASy TrEMBL
Match: A0A6J1CSD3 (transcription factor bHLH14-like OS=Momordica charantia OX=3673 GN=LOC111014144 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 9.5e-59
Identity = 130/156 (83.33%), Postives = 130/156 (83.33%), Query Frame = 0


Query: 6   MNKGAGNDHAEAKRRREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINELQVKMED 65
           MNKGAGNDHAEAKRRREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINELQVKMED
Sbjct: 1   MNKGAGNDHAEAKRRREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINELQVKMED 60

Query: 66  LESHLD--------------------------IIGLDRAVVRIQTKNMSYAVARLMEALR 125
           LESHLD                          IIGLDRAVVRIQTKNMSYAVARLMEALR
Sbjct: 61  LESHLDVKKSNPEDEATSGAKKSVMEVEVEVKIIGLDRAVVRIQTKNMSYAVARLMEALR 120

Query: 126 DLELKVHHATMCNSNDITLQDLVIGLPPQVETTEED 136
           DLELKVHHATMCNSNDITLQDLVIGLPPQVETTEED
Sbjct: 121 DLELKVHHATMCNSNDITLQDLVIGLPPQVETTEED 156

[Close]

BLAST of Moc08g38500 vs. ExPASy TrEMBL
Match: A0A6J1CTB5 (transcription factor bHLH14-like OS=Momordica charantia OX=3673 GN=LOC111014143 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.7e-23
Identity = 79/172 (45.93%), Postives = 102/172 (59.30%), Query Frame = 0


Query: 14  HAEAKR-RREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINELQVKMEDL------ 73
           H EA+R RREKLNH F  LRS++PN S  D  +A++LSDAV YI+ELQ K++DL      
Sbjct: 205 HVEAERQRREKLNHQFCCLRSVVPNISRMD--KASLLSDAVLYIHELQAKIKDLEFEFSK 264

Query: 74  ---------------------------ESHLDIIGLDRAVVRIQTKNMSYAVARLMEALR 133
                                      E  + I+GL+ AV+R+QTKNMS  +A+LMEALR
Sbjct: 265 RSNSKESKKAALVNQRRPNGGLIKVEVEVEVKIMGLE-AVIRVQTKNMSNTMAKLMEALR 324

Query: 134 DLELKVHHATMCNSNDITLQDLVIGL-PPQVETTEEDFGVWFSRYRGTLPPS 151
           DLELKVHHA+M N ND TL D+V+GL P Q +T  E+  +  S  +    PS
Sbjct: 325 DLELKVHHASMLNLNDFTLHDVVVGLRPDQKQTNIEEEAIRMSLLKTLHHPS 373

[Close]

BLAST of Moc08g38500 vs. ExPASy TrEMBL
Match: A0A0A0LKN8 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G080170 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 6.4e-23
Identity = 71/148 (47.97%), Postives = 95/148 (64.19%), Query Frame = 0


Query: 14  HAEAKR-RREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINELQVKMEDLESH--- 73
           H EA+R RREKLN  F+SLRS++PN S  D  +A++LSDAVSYINEL++K+ ++ES    
Sbjct: 148 HVEAERQRREKLNDRFNSLRSVVPNVSRMD--KASLLSDAVSYINELEMKISEMESRVLK 207

Query: 74  -------------------------------LDIIGLDRAVVRIQTKNMSYAVARLMEAL 127
                                          + IIG DRAV+R++++N+SYAVA+LMEAL
Sbjct: 208 EKKEKKNGVDENEMEEEASSRDRRERGIEIDVKIIGGDRAVIRVESRNLSYAVAKLMEAL 267

[Close]

BLAST of Moc08g38500 vs. ExPASy TrEMBL
Match: A0A6J1CRP5 (transcription factor MYC4-like OS=Momordica charantia OX=3673 GN=LOC111014145 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 4.2e-22
Identity = 75/153 (49.02%), Postives = 98/153 (64.05%), Query Frame = 0


Query: 1   MEKEGMNKGAGNDHAEAKRRREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINELQ 60
           MEK    K  G D   A RRR      FSSLR+LLPN S +DN+ AAVL  AVSYIN+L+
Sbjct: 1   MEKPAGWKKGGYD---ALRRR---GRPFSSLRALLPNVSEADNA-AAVLFHAVSYINDLR 60

Query: 61  VKMEDLESHL-------------------DIIGLDRAVVRIQTKNMSYAVARLMEALRDL 120
            K++ LES L                   +I+G D+AVVR++T+ + YA AR+MEALRDL
Sbjct: 61  TKIQQLESQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVMEALRDL 120

Query: 121 ELKVHHATMCNSNDITLQDLVIGLPPQVETTEE 135
           ELK+HHAT+ N N++T Q LV+GLP   +TT++
Sbjct: 121 ELKLHHATISNLNNVTCQRLVVGLPSPQQTTQK 146

[Close]

BLAST of Moc08g38500 vs. ExPASy TrEMBL
Match: A0A5A7V6X0 (Transcription factor MYC3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold165G00380 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-21
Identity = 69/146 (47.26%), Postives = 93/146 (63.70%), Query Frame = 0


Query: 14  HAEAKR-RREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINELQVKMEDLESHLD- 73
           H EA+R RREKLN  F+SLR ++PN S  D  +A++LSDAVSYINEL++K+ ++ES +  
Sbjct: 147 HVEAERQRREKLNDRFNSLRIVVPNVSRMD--KASLLSDAVSYINELEMKISEMESRVSK 206

Query: 74  -------------------------------IIGLDRAVVRIQTKNMSYAVARLMEALRD 127
                                          IIG DRAV+R++++N+SYAVA+LMEALRD
Sbjct: 207 KKKKNGVDENEMEEEASSRDRRERGIEIDVKIIGGDRAVIRVESRNLSYAVAKLMEALRD 266

[Close]

BLAST of Moc08g38500 vs. TAIR 10
Match: AT1G32640.1 (Basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 74.7 bits (182), Expect = 7.1e-14
Identity = 55/165 (33.33%), Postives = 87/165 (52.73%), Query Frame = 0


Query: 13  DHAEAKR-RREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINEL------------ 72
           +H EA+R RREKLN  F +LR+++PN S  D  +A++L DA++YINEL            
Sbjct: 452 NHVEAERQRREKLNQRFYALRAVVPNVSKMD--KASLLGDAIAYINELKSKVVKTESEKL 511

Query: 73  -------QVKME-----------------------DLESHLDIIGLDRAVVRIQTKNMSY 132
                  +VK+E                        +E  + IIG D A++R+++   ++
Sbjct: 512 QIKNQLEEVKLELAGRKASASGGDMSSSCSSIKPVGMEIEVKIIGWD-AMIRVESSKRNH 571

Query: 133 AVARLMEALRDLELKVHHATMCNSNDITLQDLVIGLPPQVETTEE 135
             ARLM AL DLEL+V+HA+M   ND+ +Q   + +  ++ T E+
Sbjct: 572 PAARLMSALMDLELEVNHASMSVVNDLMIQQATVKMGFRIYTQEQ 613

[Close]

BLAST of Moc08g38500 vs. TAIR 10
Match: AT5G46830.1 (NACL-inducible gene 1 )

HSP 1 Score: 73.6 bits (179), Expect = 1.6e-13
Identity = 59/176 (33.52%), Postives = 88/176 (50.00%), Query Frame = 0


Query: 2   EKEGMNKGAGND----HAEAKR-RREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYI 61
           +K G     G D    H EA+R RREKLNH F +LR+++PN S  D  + ++L DAV YI
Sbjct: 328 KKRGRKPAHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMD--KTSLLEDAVCYI 387

Query: 62  NELQVKME--DLESH------------------------------------LDIIGLDRA 121
           NEL+ K E  +LE H                                    + I+  D A
Sbjct: 388 NELKSKAENVELEKHAIEIQFNELKEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESDDA 447

Query: 122 VVRIQTKNMSYAVARLMEALRDLELKVHHATMCNSNDITLQDLVIGLPPQVETTEE 135
           +VR++++   +  ARLM AL DLEL+V+HA++   ND+ +Q   + +  ++   EE
Sbjct: 448 MVRVESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQQANVKMGLRIYKQEE 501

[Close]

BLAST of Moc08g38500 vs. TAIR 10
Match: AT4G00870.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 2.1e-13
Identity = 49/158 (31.01%), Postives = 82/158 (51.90%), Query Frame = 0


Query: 14  HAEA-KRRREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINELQVKMEDLESHL-- 73
           H EA K+RREKLNH F +LR+++P  S  D  +A++LSDAVSYI  L+ K++DLE+ +  
Sbjct: 250 HVEAEKQRREKLNHRFYALRAIVPKVSRMD--KASLLSDAVSYIESLKSKIDDLETEIKK 309

Query: 74  ------------------------------------------DIIGLDRAVVRIQTKNMS 127
                                                      I+G + A++R+QT+N++
Sbjct: 310 MKMTETDKLDNSSSNTSPSSVEYQVNQKPSKSNRGSDLEVQVKIVG-EEAIIRVQTENVN 369

[Close]

BLAST of Moc08g38500 vs. TAIR 10
Match: AT4G17880.1 (Basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 72.8 bits (177), Expect = 2.7e-13
Identity = 54/164 (32.93%), Postives = 87/164 (53.05%), Query Frame = 0


Query: 13  DHAEAKR-RREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINELQVKM-------E 72
           +H EA+R RREKLN  F SLR+++PN S  D  +A++L DA+SYI+EL+ K+       E
Sbjct: 416 NHVEAERQRREKLNQRFYSLRAVVPNVSKMD--KASLLGDAISYISELKSKLQKAESDKE 475

Query: 73  DLESHLD----------------------------------IIGLDRAVVRIQTKNMSYA 132
           +L+  +D                                  IIG D A++RIQ    ++ 
Sbjct: 476 ELQKQIDVMNKEAGNAKSSVKDRKCLNQESSVLIEMEVDVKIIGWD-AMIRIQCSKRNHP 535

Query: 133 VARLMEALRDLELKVHHATMCNSNDITLQDLVIGLPPQVETTEE 135
            A+ MEAL++L+L+V+HA++   ND+ +Q   + +  Q  T ++
Sbjct: 536 GAKFMEALKELDLEVNHASLSVVNDLMIQQATVKMGNQFFTQDQ 576

[Close]

BLAST of Moc08g38500 vs. TAIR 10
Match: AT5G46760.1 (Basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 69.7 bits (169), Expect = 2.3e-12
Identity = 52/162 (32.10%), Postives = 80/162 (49.38%), Query Frame = 0


Query: 13  DHAEAKR-RREKLNHHFSSLRSLLPNASNSDNSEAAVLSDAVSYINELQVKMEDLES--- 72
           +H EA+R RREKLN  F SLR+++PN S  D  +A++L DA+SYINEL+ K++  ES   
Sbjct: 415 NHVEAERQRREKLNQRFYSLRAVVPNVSKMD--KASLLGDAISYINELKSKLQQAESDKE 474

Query: 73  ------------------------------------------HLDIIGLDRAVVRIQTKN 129
                                                      + IIG D  ++R+Q   
Sbjct: 475 EIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWD-VMIRVQCGK 534

The following BLAST results are available for this feature:

BLAST of Moc08g38500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144464.1	2.0e-58	83.33	transcription factor bHLH14-like [Momordica charantia]	[more]
XP_038890552.1	5.4e-24	48.41	transcription factor MYC3-like [Benincasa hispida]	[more]
XP_022144463.1	3.5e-23	45.93	transcription factor bHLH14-like [Momordica charantia]	[more]
XP_031736394.1	1.3e-22	47.97	transcription factor bHLH14-like [Cucumis sativus] >KGN61317.1 hypothetical prot...	[more]
XP_022144465.1	8.6e-22	49.02	transcription factor MYC4-like [Momordica charantia]	[more]

BLAST of Moc08g38500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A060KY90	4.5e-13	32.32	Transcription factor MYC1 OS=Solanum lycopersicum OX=4081 GN=MYC1 PE=1 SV=1	[more]
A0A3Q7HRZ6	7.6e-13	34.13	Transcription factor MYC2 OS=Solanum lycopersicum OX=4081 GN=MYC2 PE=1 SV=1	[more]
Q39204	9.9e-13	33.33	Transcription factor MYC2 OS=Arabidopsis thaliana OX=3702 GN=MYC2 PE=1 SV=2	[more]
Q9LUK7	2.2e-12	33.52	Transcription factor bHLH28 OS=Arabidopsis thaliana OX=3702 GN=BHLH28 PE=2 SV=1	[more]
O23090	2.9e-12	31.01	Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1	[more]

BLAST of Moc08g38500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CSD3	9.5e-59	83.33	transcription factor bHLH14-like OS=Momordica charantia OX=3673 GN=LOC111014144 ...	[more]
A0A6J1CTB5	1.7e-23	45.93	transcription factor bHLH14-like OS=Momordica charantia OX=3673 GN=LOC111014143 ...	[more]
A0A0A0LKN8	6.4e-23	47.97	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G080170 PE=4 S...	[more]
A0A6J1CRP5	4.2e-22	49.02	transcription factor MYC4-like OS=Momordica charantia OX=3673 GN=LOC111014145 PE...	[more]
A0A5A7V6X0	1.2e-21	47.26	Transcription factor MYC3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Moc08g38500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32640.1	7.1e-14	33.33	Basic helix-loop-helix (bHLH) DNA-binding family protein	[more]
AT5G46830.1	1.6e-13	33.52	NACL-inducible gene 1	[more]
AT4G00870.1	2.1e-13	31.01	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G17880.1	2.7e-13	32.93	Basic helix-loop-helix (bHLH) DNA-binding family protein	[more]
AT5G46760.1	2.3e-12	32.10	Basic helix-loop-helix (bHLH) DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 14..65 e-value: 2.5E-8 score: 43.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 18..60 e-value: 3.1E-10 score: 39.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 8..59 score: 12.715696
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 13..113 e-value: 6.6E-13 score: 50.7
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 18..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR11514:SF40	TRANSCRIPTION FACTOR BHLH14	coord: 72..134 coord: 8..70
IPR045084	Transcription factor AIB/MYC-like	PANTHER	PTHR11514	MYC	coord: 72..134 coord: 8..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g38500.1	Moc08g38500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity