Moc08g36000 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g36000
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	double-stranded RNA-binding protein 4-like isoform X2
Location	chr8: 26584749 .. 26588307 (-)
RNA-Seq Expression	Moc08g36000
Synteny	Moc08g36000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGAAAATTCCGGTGCAATTGTAGCACATGCTGCGCAACAACCTTCATTCCCACCGGACTCAGCTCCGGCTGCTGTTCCGGCCGCTATTCCGGTGGAAATCTCTGGTGCTTCTCAGCCTGCAGCAGATGTTCGTCCTCCATCTGTTTTACCAGACGCAGTTCGGAACCCGAGTGCGGCTCCAGCGCCGATTTCATCTCCGATTCCCTCCGATTCTACCCGTAAGTCGGTGATATTGTTGCCTATCCTAGTTATTCAAGAATCGGTTTTGCTGTCACTGCATTATTAGTGTGTTTGAGGGAATTCCGATGCATTATGTGTTTTCTCTGTTTTTTTTTTCTCATTTGTTAGATTTTTTTTGTTCTTTATCTCTGATCCTTAGAGGTGTGTCCTCTGCGAAAATAATAGCGAGACTTATATCGAATCTTTATTGTTTGTTATTTCTTTCAAGGCTGCTAGTTGTATTTTCCTGCACAGTTTCAACATTCTCTGGTGTGCTTTTGGAGAGATGGAGAGACCAAGCATTTATCACAGCTCTCTTTTGAACCTTTCCTTTGGCAGATCAGTTTCTTGGCAATCTGATGGTTGATCTTACTCTAAAGTAACAAAAGAACGGAGAACCCTTGAGGGAGTGGAAAATAATTGGGAGGATTTGCTCATTTTACTTTGCATTGTTTTTCCCTTTGGGGTGATTTTCCTCTACTTTCTATGATTAAAGGATCAGAGCCTTCTTTTTTTTTTTTAAATAAATTTTGGCAGCTCATGCATCTTGGTCTAGCCTATGTTATTGTATGGCCTTTTTGTGCTTCCATTGCTCCGAACGAAAGTGGTCTTTAAGTTTAAAATGAAAAAAGAAAAGGAAAAGGAGAGAGGGACTAAGTCGTTTATTGAAGTGGAGAGTTCTGCCATTTTCTAATGATAACGGGAGAATTTTGTAATCTCCTCCAACTGTAGGTTTGGACTCTTCTTATGTTTCTTTCCGTTCGGCCTTGTAATTTTGTGCTTTTATTTTAACCTAGTTCCTATTAAAAAGGGGGTTCCATACGCTTCTATTATGAAAAAATTTGTTCTTTAGTGGGTCTTGGTTTTTCTAATAAAAATGCAGAAAAGGAACATCTTCAATGTTATGGATTTTCTTTTATTTGTTTTGCAGAGACCTTCATATACAAGAGTCAATTGCATGAGTACGCGCAAAGATCGAGGATCCCATTACCAGTTTATCAAACAGTTATTGAAGGATCTATAGGTTTACCAAAATATAGGTCTACTGTGTTAGTTGATGAGGTACATTACGTGTCTCCAAATACGTTTCGTAATCGAAGGGGAGCTGAACATGATGCTGCTAGAATTGCCCTTGAGTACATATCAAAAAGAACAAAGGACGATGGCTTTCTTCTTCTTCAGGAGGTATGATTTATATAATAAGATCGAAACTTGTTCGGGTGACCTTTGGACTTTAGTACGTTTATATATTCGGTAAGATTTCCCATAGACATTCTATGAGATTGTAAATTATCCGATTTATCTTAGTAATGAGACATTTAGTTTGTCAGAATAAGAAGTTTGACTATGAGACCCTTGGGAATGTGATGGCTAGAAATTGGATGCTTTTGTTGGCAGTTCACAGGAATAGGTTTCAAACATATGAGAATGAGGGATAGTGCTCTAGGTAGGATGGTCATCATGGGGTCTAAACTCATTCCCTCTAAGTCTCTGTACTTCCACTAGTTGTAATGGACCCTTAGGCCAACTCAGGATAGTTATCATTTATATTATCTTTATCTTCATAAGATTCTCTGTATTGCTGTAGTTTTTTAAATTTATGTACGTCTTAATACGGCTTGGATTCTATATTCATTTCTCCTACATCTTTATGTTGTCTTATCAAAAAGAAATAATGATAAAGTAGTTCATGTGAATAAATATTAGGAAGTAGTATGGAGTATTCAATATTCTCGGAGGAATATACTTATTTCTCTGATTCCACATACGTTCTAGGTGATATTAGCAATTTATTTTTGCATTCTAACACATTTTATTTACAACCTTAGCTGTAGTTTCTCTTCTGCTCCACTCTTTGTTGTATTACGTCTATAGTATAGACTATAACGCTTCCCTAATTCATATTCAAACATTGGGCATATTTTTTACTATGAGTCTTTTTTTTTTTTTTTTTTGAAAAGAAACAGATTTCATTAATGTAATGAAATGGAAAAGGAATACAAAAGGGGAAGATCCCAAACCAAAGGAGTTACAAAAAGGCTCTCCAAATGGTTAAAAGAGAAACAAAGCTATAGTGTTTAAAGATAGGAGAGCATTTGCACCAAGATACAACCATAGACACTATAGATTCAAAAATGATGCCAACAGAAAGCTCCTTTCCTAAGAAGATCCGGCGATTTCTTTCTAACCATGTCGACCAAAGCAGTGCCCTAACAAAATGCTTCCATAGGATTCCTGCTTCACTGGTGAAAGGGTGCTCCAGAAGAGTGGATGCTAGAAGAGAACAGAGATCCGTGTGTAGGACTATAGGCCAACCGAAGGATGAAAGAATAGAGGTTTTTACTCTGAGTCTGTGGAAACAGGAAACTACTATTCACTTATTTAAAACTTCACACTAAGATGAGCTCTACCTTCACCCGAAGAATAAGATCACCAACATTATAACTTAATTAGGCGATAATTTACTTTATAATTCAATTCGATCAAGGCAATAGTTTTGTGTCCTTGTCATCTTAATGGTGCATTTACTTATGATTTGATTGTCATTGACTGTTTTAAAATTTCATTCAGGCTAGATTATGATATCAAGTACTAGTAACTTTTCCATGTCAGTATTGATTTTTTTTTTTTTGAGAAATACTCATCATTGATATGTTGAAAAGATAAACACATATATATTTTTGTTGGAGTACTTTTTATCATTTTTTTGTCTAATGTACAAATTATGTTTTTTTGTTCTTTGTTCAGGATTTGATGTTTTGTAAGTCCATTTTATCTGAATATACGGTCAAAATGAACTTGAAAAGACCTCTTTACACAACAAATCATCACGACGGCTCAGTTCCAATTTTCCAATCCACCTTGGTTTTTGATGGTGTGGTTTATACCGGCAATCTTAGTAGGAGCAAAAAAGAGGCCGAGCAATTGGCAGCACGTGCTGCTATACTATCACTTATTGGTATTTAATTGTTGTGAACAAATACTTGTGAATTATTCCAAAATACCTGCTGCCTTGCGAAAGTTGTCGAATTTTTTTACAGGTGATGCAGGAAATCCCGAATCACAAAAAACCCTTACTAAAATTATTGCTTCTAAAGTCAGACTCCATGCAACGTTGCAAAAGGTTAAAGATTCATTTCCATCACAAATTCAATCCAAACCCATGTCTGAAAAGTCAGAGCAAGGACATGTTGGAATGACAGTTAATGAAGATATATATGTCGAAAATGCTAGTTTGACTGATGAAGTTGTATCTGGTGCAATTTCAGAGATTCCTCCCACAACATCTCATTTTCAACCTGAATTTAAACCAGAAGCATCACCCCTTTCAGTGA

mRNA sequence

ATGGTGGAAAATTCCGGTGCAATTGTAGCACATGCTGCGCAACAACCTTCATTCCCACCGGACTCAGCTCCGGCTGCTGTTCCGGCCGCTATTCCGGTGGAAATCTCTGGTGCTTCTCAGCCTGCAGCAGATGTTCGTCCTCCATCTGTTTTACCAGACGCAGTTCGGAACCCGAGTGCGGCTCCAGCGCCGATTTCATCTCCGATTCCCTCCGATTCTACCCAGACCTTCATATACAAGAGTCAATTGCATGAGTACGCGCAAAGATCGAGGATCCCATTACCAGTTTATCAAACAGTTATTGAAGGATCTATAGGTTTACCAAAATATAGGTCTACTGTGTTAGTTGATGAGGTACATTACGTGTCTCCAAATACGTTTCGTAATCGAAGGGGAGCTGAACATGATGCTGCTAGAATTGCCCTTGAGTACATATCAAAAAGAACAAAGGACGATGGCTTTCTTCTTCTTCAGGAGGATTTGATGTTTTGTAAGTCCATTTTATCTGAATATACGGTCAAAATGAACTTGAAAAGACCTCTTTACACAACAAATCATCACGACGGCTCAGTTCCAATTTTCCAATCCACCTTGGTTTTTGATGGTGTGGTTTATACCGGCAATCTTAGTAGGAGCAAAAAAGAGGCCGAGCAATTGGCAGCACGTGCTGCTATACTATCACTTATTGGTGATGCAGGAAATCCCGAATCACAAAAAACCCTTACTAAAATTATTGCTTCTAAAGTCAGACTCCATGCAACGTTGCAAAAGAGATTCCTCCCACAACATCTCATTTTCAACCTGAATTTAAACCAGAAGCATCACCCCTTTCAGTGA

Coding sequence (CDS)

ATGGTGGAAAATTCCGGTGCAATTGTAGCACATGCTGCGCAACAACCTTCATTCCCACCGGACTCAGCTCCGGCTGCTGTTCCGGCCGCTATTCCGGTGGAAATCTCTGGTGCTTCTCAGCCTGCAGCAGATGTTCGTCCTCCATCTGTTTTACCAGACGCAGTTCGGAACCCGAGTGCGGCTCCAGCGCCGATTTCATCTCCGATTCCCTCCGATTCTACCCAGACCTTCATATACAAGAGTCAATTGCATGAGTACGCGCAAAGATCGAGGATCCCATTACCAGTTTATCAAACAGTTATTGAAGGATCTATAGGTTTACCAAAATATAGGTCTACTGTGTTAGTTGATGAGGTACATTACGTGTCTCCAAATACGTTTCGTAATCGAAGGGGAGCTGAACATGATGCTGCTAGAATTGCCCTTGAGTACATATCAAAAAGAACAAAGGACGATGGCTTTCTTCTTCTTCAGGAGGATTTGATGTTTTGTAAGTCCATTTTATCTGAATATACGGTCAAAATGAACTTGAAAAGACCTCTTTACACAACAAATCATCACGACGGCTCAGTTCCAATTTTCCAATCCACCTTGGTTTTTGATGGTGTGGTTTATACCGGCAATCTTAGTAGGAGCAAAAAAGAGGCCGAGCAATTGGCAGCACGTGCTGCTATACTATCACTTATTGGTGATGCAGGAAATCCCGAATCACAAAAAACCCTTACTAAAATTATTGCTTCTAAAGTCAGACTCCATGCAACGTTGCAAAAGAGATTCCTCCCACAACATCTCATTTTCAACCTGAATTTAAACCAGAAGCATCACCCCTTTCAGTGA

Protein sequence

MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKRFLPQHLIFNLNLNQKHHPFQ

Homology

[Close]

BLAST of Moc08g36000 vs. NCBI nr
Match: XP_022143455.1 (double-stranded RNA-binding protein 4-like isoform X2 [Momordica charantia])

HSP 1 Score: 538.1 bits (1385), Expect = 4.5e-149
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSA 60
           MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSA
Sbjct: 1   MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSA 60

Query: 61  APAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVH 120
           APAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVH
Sbjct: 61  APAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVH 120

Query: 121 YVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRP 180
           YVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRP
Sbjct: 121 YVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRP 180

Query: 181 LYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKT 240
           LYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKT
Sbjct: 181 LYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKT 240

Query: 241 LTKIIASKVRLHATLQKRFLPQHLIFNLNLNQKHHPFQ 279
           LTKIIASKVRLHATLQKRFLPQHLIFNLNLNQKHHPFQ
Sbjct: 241 LTKIIASKVRLHATLQKRFLPQHLIFNLNLNQKHHPFQ 278

[Close]

BLAST of Moc08g36000 vs. NCBI nr
Match: XP_022143454.1 (double-stranded RNA-binding protein 4-like isoform X1 [Momordica charantia])

HSP 1 Score: 493.8 bits (1270), Expect = 9.6e-136
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSA 60
           MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSA
Sbjct: 1   MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSA 60

Query: 61  APAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVH 120
           APAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVH
Sbjct: 61  APAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVH 120

Query: 121 YVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRP 180
           YVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRP
Sbjct: 121 YVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRP 180

Query: 181 LYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKT 240
           LYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKT
Sbjct: 181 LYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKT 240

Query: 241 LTKIIASKVRLHATLQK 258
           LTKIIASKVRLHATLQK
Sbjct: 241 LTKIIASKVRLHATLQK 257

[Close]

BLAST of Moc08g36000 vs. NCBI nr
Match: XP_023526614.1 (double-stranded RNA-binding protein 4-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526615.1 double-stranded RNA-binding protein 4-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 377.5 bits (968), Expect = 1.0e-100
Identity = 199/257 (77.43%), Postives = 218/257 (84.82%), Query Frame = 0


Query: 1   MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSA 60
           MVE SG + A   QQ SFPPDSAPA VPA IPVE S   Q  +D RPPSVLPDA+  PS 
Sbjct: 1   MVEESGTVEAVPQQQSSFPPDSAPAVVPAVIPVENSNTPQLESDTRPPSVLPDAILIPST 60

Query: 61  APAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVH 120
           A AP+SSP PSD TQ F+YK+ LHEY Q+SRIPLPVYQT  EGS G+PKYRSTV+VDEVH
Sbjct: 61  ASAPVSSPKPSDLTQLFLYKNHLHEYTQKSRIPLPVYQTFDEGSQGVPKYRSTVVVDEVH 120

Query: 121 YVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRP 180
           YVSPNTFRNRR AE DAARIALEYISK+ KDDGF+LL EDLM CKSILSEYTVKM+LKRP
Sbjct: 121 YVSPNTFRNRRAAEQDAARIALEYISKKAKDDGFVLLHEDLMLCKSILSEYTVKMSLKRP 180

Query: 181 LYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKT 240
           +YTT  H+GSVPIFQSTLVFDGVVYTG++SRSKKEAEQLAARAAILSL  DAGNP+SQKT
Sbjct: 181 MYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSL-HDAGNPKSQKT 240

Query: 241 LTKIIASKVRLHATLQK 258
           L +IIASKVRLHA +QK
Sbjct: 241 LAEIIASKVRLHAMMQK 256

[Close]

BLAST of Moc08g36000 vs. NCBI nr
Match: XP_022984143.1 (double-stranded RNA-binding protein 4-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 373.2 bits (957), Expect = 1.9e-99
Identity = 197/257 (76.65%), Postives = 217/257 (84.44%), Query Frame = 0


Query: 1   MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSA 60
           MVE SG + A   QQ SFPPDSAPA VPA IPVE S   Q  +D RPP VLP A+  PS+
Sbjct: 1   MVEESGTVEAVPQQQSSFPPDSAPAVVPALIPVEDSNTPQLESDTRPPPVLPGAILIPSS 60

Query: 61  APAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVH 120
           A AP+SSP PSD TQ F+YK+ LHEY Q+SRIPLPVYQT  EGS G+PKYRSTV+VDEVH
Sbjct: 61  ASAPVSSPKPSDLTQLFLYKNHLHEYTQKSRIPLPVYQTFDEGSQGIPKYRSTVVVDEVH 120

Query: 121 YVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRP 180
           YVSPNTFRNRR AE DAARIALEYISK+ KDDGF+LL EDLM CKSILSEYTVKM+LKRP
Sbjct: 121 YVSPNTFRNRRAAEQDAARIALEYISKKAKDDGFVLLHEDLMLCKSILSEYTVKMSLKRP 180

Query: 181 LYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKT 240
           +YTT  H+GSVPIFQSTLVFDGVVYTG++SRSKKEAEQLAARAAILSL  DAGNP+SQKT
Sbjct: 181 MYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSL-HDAGNPKSQKT 240

Query: 241 LTKIIASKVRLHATLQK 258
           L +IIASKVRLHA +QK
Sbjct: 241 LAEIIASKVRLHAMMQK 256

[Close]

BLAST of Moc08g36000 vs. NCBI nr
Match: XP_022935533.1 (double-stranded RNA-binding protein 4-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 373.2 bits (957), Expect = 1.9e-99
Identity = 197/257 (76.65%), Postives = 217/257 (84.44%), Query Frame = 0


Query: 1   MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSA 60
           MVE SG + A   QQ SFPPDSA A VPA IPVE S   Q  +D RPP VLPDA+  PS+
Sbjct: 1   MVEESGTVEAVPQQQSSFPPDSASAVVPAVIPVENSNTPQLESDTRPPPVLPDAILIPSS 60

Query: 61  APAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVH 120
           A AP+SSP PSD TQ F+YK+ LHEY Q+SRIPLPVYQT  EGS G+PKYRSTV+VDEVH
Sbjct: 61  ASAPVSSPKPSDLTQLFLYKNHLHEYTQKSRIPLPVYQTFDEGSQGIPKYRSTVVVDEVH 120

Query: 121 YVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRP 180
           YVSPNTFRNRR AE DAARIALEYISK+ KDDGF+LL EDLM CKSILSEYTVKM+LKRP
Sbjct: 121 YVSPNTFRNRRAAEQDAARIALEYISKKAKDDGFVLLHEDLMLCKSILSEYTVKMSLKRP 180

Query: 181 LYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKT 240
           +YTT  H+GSVPIFQSTLVFDGVVYTG++SRSKKEAEQLAARAAILSL  DAGNP+SQKT
Sbjct: 181 MYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSL-HDAGNPKSQKT 240

Query: 241 LTKIIASKVRLHATLQK 258
           L +IIASKVRLHA +QK
Sbjct: 241 LAEIIASKVRLHAMMQK 256

[Close]

BLAST of Moc08g36000 vs. ExPASy Swiss-Prot
Match: Q6YW64 (Double-stranded RNA-binding protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB4 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.4e-25
Identity = 76/208 (36.54%), Postives = 116/208 (55.77%), Query Frame = 0


Query: 49  SVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLP 108
           +V   A      +PAP+  P P  +     YKS+L EY Q++   LP+Y T  +G     
Sbjct: 14  AVAHTATAGTDHSPAPLPPPPPHCN-----YKSKLQEYLQQANKQLPIYCTKCKGEHHQL 73

Query: 109 KYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTK-----DDGFLLLQEDLMF 168
           K++STV+VD   + S    R  + AE DAA++A + + +R +      D F L+ +D++F
Sbjct: 74  KFKSTVMVDGEEFSSTFCHRRVKDAEQDAAKVAYDTLLERKETETDDTDVFELIDQDVVF 133

Query: 169 CKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARA 228
            KSIL EYT K    +P Y+    +GSV  + S++ F G  YTG  +R+KK+AEQ AARA
Sbjct: 134 SKSILHEYTTKTKTDQPEYSVTKTEGSVTPYVSSVSFAGHTYTGGAARNKKDAEQKAARA 193

Query: 229 AILSLIGDAGNPESQKTLTKIIASKVRL 252
           A+ SL+       +  ++ KI+ SK +L
Sbjct: 194 AVKSLLA-----TNYTSMAKIVRSKEKL 211

[Close]

BLAST of Moc08g36000 vs. ExPASy Swiss-Prot
Match: O04492 (Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRB1 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.3e-22
Identity = 63/172 (36.63%), Postives = 97/172 (56.40%), Query Frame = 0


Query: 66  SSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPN 125
           S+ + S  +  +++KS+L EYAQ+ ++P PVY+ V EG      ++STV++D V Y S  
Sbjct: 3   STDVSSGVSNCYVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLP 62

Query: 126 TFRNRRGAEHDAARIALEYISKRTKDDGFLLLQ-EDLMFCKSILSEYTVKMNLKRPLYTT 185
            F NR+ AE  AA +AL  ++K ++    +     +   CK++L EY  KMN   PLY  
Sbjct: 63  GFFNRKAAEQSAAEVALRELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLYQC 122

Query: 186 NHHD--GSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGN 235
              +  G V  F  T+   G+ YTG  +R+KK+AE  A R A+L++  D  N
Sbjct: 123 QKVETLGRVTQFTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQSDTKN 174

[Close]

BLAST of Moc08g36000 vs. ExPASy Swiss-Prot
Match: Q0DJA3 (Double-stranded RNA-binding protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB3 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 7.4e-22
Identity = 69/211 (32.70%), Postives = 107/211 (50.71%), Query Frame = 0


Query: 48  PSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGL 107
           P+ LP    N S  PAPI +         +++KS+L EYAQ++ +  P Y T  EG    
Sbjct: 7   PTPLPPETANTS--PAPIGATAGIRVENCYVFKSRLQEYAQKAGLQTPEYHTSKEGPSHE 66

Query: 108 PKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSI 167
           P ++STV+++   Y S   F NR+ AE  AA +AL  I K    +  +   ++   CK++
Sbjct: 67  PVFKSTVVINNTSYGSLPGFSNRKAAEQSAAEVALMEIVKSIPANANIPAVQETGLCKNL 126

Query: 168 LSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILS 227
           L EY  KMN   P Y        +  F  T+   G+ Y G  +R+KK+AE  AAR A+L+
Sbjct: 127 LQEYAQKMNYAIPSYICTKPASGLAPFLCTVEIGGIQYIGAAARTKKDAEIKAARTALLA 186

Query: 228 LIGDAGNPESQKTLTKIIASKVRLHATLQKR 259
           + G +    +  T   ++  K R+   ++KR
Sbjct: 187 IQGQSEGSANGATKYIVVPGK-RVGKEVEKR 214

[Close]

BLAST of Moc08g36000 vs. ExPASy Swiss-Prot
Match: Q0IQN6 (Double-stranded RNA-binding protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB8 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 7.4e-22
Identity = 69/212 (32.55%), Postives = 110/212 (51.89%), Query Frame = 0


Query: 47  PPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIG 106
           PP+ LP    N S AP   ++ I  ++   +++KS+L EYAQ++ +  P Y T  EG   
Sbjct: 4   PPTPLPPETANTSPAPNGATAGIRVEN--CYVFKSRLQEYAQKTGLQTPEYHTFKEGPSH 63

Query: 107 LPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKS 166
            P ++STV+++   Y S   F NR+ AE  AA +AL  I K    +  +   ++   CK+
Sbjct: 64  EPVFKSTVVINNTSYDSLPGFFNRKAAEQSAAEVALMEIVKSIPANANIPAVQETGLCKN 123

Query: 167 ILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAIL 226
           +L EY  KMN   P Y        +  F  T+   G+ Y G  +R+KK+AE  AAR A+L
Sbjct: 124 LLQEYAQKMNYAIPSYICTKSASGLAPFICTVEIGGIQYIGAAARTKKDAEIKAARTALL 183

Query: 227 SLIGDAGNPESQKTLTKIIASKVRLHATLQKR 259
           ++ G +    +  T   ++  K R+   ++KR
Sbjct: 184 AIQGQSEGSANGATKYIVVPGK-RVGKEVEKR 212

[Close]

BLAST of Moc08g36000 vs. ExPASy Swiss-Prot
Match: Q0IV63 (Double-stranded RNA-binding protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB7 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.3e-21
Identity = 66/202 (32.67%), Postives = 104/202 (51.49%), Query Frame = 0


Query: 47  PPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIG 106
           PP+ LP    N S AP   ++ I  ++   +++KS+L EYAQ++ +  P Y T  EG   
Sbjct: 4   PPTPLPPETANTSPAPNGATAGIRVEN--CYVFKSRLQEYAQKAGLQTPEYHTFKEGPSH 63

Query: 107 LPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKS 166
            P ++STV+++   Y S   F NR+ AE  AA +AL  I K    +  +   ++   CK+
Sbjct: 64  EPVFKSTVVINNTSYDSLPGFFNRKAAEQSAAEVALMEIVKSIPANANIPAVQETGLCKN 123

Query: 167 ILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAIL 226
           +L EY  KMN   P Y        +  F  T+   G+ Y G  +R+KK+AE  AAR A+L
Sbjct: 124 LLQEYAQKMNYAIPSYICTKSASGLAPFICTVEIGGIQYIGAAARTKKDAEIKAARTALL 183

Query: 227 SLIGDAGNPESQKTLTKIIASK 249
           ++ G +    +  T   ++  K
Sbjct: 184 AIQGQSEGSANGATKYIVVPGK 203

[Close]

BLAST of Moc08g36000 vs. ExPASy TrEMBL
Match: A0A6J1CNV0 (double-stranded RNA-binding protein 4-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013327 PE=4 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 2.2e-149
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSA 60
           MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSA
Sbjct: 1   MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSA 60

Query: 61  APAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVH 120
           APAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVH
Sbjct: 61  APAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVH 120

Query: 121 YVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRP 180
           YVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRP
Sbjct: 121 YVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRP 180

Query: 181 LYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKT 240
           LYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKT
Sbjct: 181 LYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKT 240

Query: 241 LTKIIASKVRLHATLQKRFLPQHLIFNLNLNQKHHPFQ 279
           LTKIIASKVRLHATLQKRFLPQHLIFNLNLNQKHHPFQ
Sbjct: 241 LTKIIASKVRLHATLQKRFLPQHLIFNLNLNQKHHPFQ 278

[Close]

BLAST of Moc08g36000 vs. ExPASy TrEMBL
Match: A0A6J1CPC5 (double-stranded RNA-binding protein 4-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013327 PE=4 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 4.7e-136
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSA 60
           MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSA
Sbjct: 1   MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSA 60

Query: 61  APAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVH 120
           APAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVH
Sbjct: 61  APAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVH 120

Query: 121 YVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRP 180
           YVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRP
Sbjct: 121 YVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRP 180

Query: 181 LYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKT 240
           LYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKT
Sbjct: 181 LYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKT 240

Query: 241 LTKIIASKVRLHATLQK 258
           LTKIIASKVRLHATLQK
Sbjct: 241 LTKIIASKVRLHATLQK 257

[Close]

BLAST of Moc08g36000 vs. ExPASy TrEMBL
Match: A0A6J1J9P9 (double-stranded RNA-binding protein 4-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111482525 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 9.2e-100
Identity = 197/257 (76.65%), Postives = 217/257 (84.44%), Query Frame = 0


Query: 1   MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSA 60
           MVE SG + A   QQ SFPPDSAPA VPA IPVE S   Q  +D RPP VLP A+  PS+
Sbjct: 1   MVEESGTVEAVPQQQSSFPPDSAPAVVPALIPVEDSNTPQLESDTRPPPVLPGAILIPSS 60

Query: 61  APAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVH 120
           A AP+SSP PSD TQ F+YK+ LHEY Q+SRIPLPVYQT  EGS G+PKYRSTV+VDEVH
Sbjct: 61  ASAPVSSPKPSDLTQLFLYKNHLHEYTQKSRIPLPVYQTFDEGSQGIPKYRSTVVVDEVH 120

Query: 121 YVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRP 180
           YVSPNTFRNRR AE DAARIALEYISK+ KDDGF+LL EDLM CKSILSEYTVKM+LKRP
Sbjct: 121 YVSPNTFRNRRAAEQDAARIALEYISKKAKDDGFVLLHEDLMLCKSILSEYTVKMSLKRP 180

Query: 181 LYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKT 240
           +YTT  H+GSVPIFQSTLVFDGVVYTG++SRSKKEAEQLAARAAILSL  DAGNP+SQKT
Sbjct: 181 MYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSL-HDAGNPKSQKT 240

Query: 241 LTKIIASKVRLHATLQK 258
           L +IIASKVRLHA +QK
Sbjct: 241 LAEIIASKVRLHAMMQK 256

[Close]

BLAST of Moc08g36000 vs. ExPASy TrEMBL
Match: A0A6J1J1D4 (double-stranded RNA-binding protein 4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482525 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 9.2e-100
Identity = 197/257 (76.65%), Postives = 217/257 (84.44%), Query Frame = 0


Query: 1   MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSA 60
           MVE SG + A   QQ SFPPDSAPA VPA IPVE S   Q  +D RPP VLP A+  PS+
Sbjct: 1   MVEESGTVEAVPQQQSSFPPDSAPAVVPALIPVEDSNTPQLESDTRPPPVLPGAILIPSS 60

Query: 61  APAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVH 120
           A AP+SSP PSD TQ F+YK+ LHEY Q+SRIPLPVYQT  EGS G+PKYRSTV+VDEVH
Sbjct: 61  ASAPVSSPKPSDLTQLFLYKNHLHEYTQKSRIPLPVYQTFDEGSQGIPKYRSTVVVDEVH 120

Query: 121 YVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRP 180
           YVSPNTFRNRR AE DAARIALEYISK+ KDDGF+LL EDLM CKSILSEYTVKM+LKRP
Sbjct: 121 YVSPNTFRNRRAAEQDAARIALEYISKKAKDDGFVLLHEDLMLCKSILSEYTVKMSLKRP 180

Query: 181 LYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKT 240
           +YTT  H+GSVPIFQSTLVFDGVVYTG++SRSKKEAEQLAARAAILSL  DAGNP+SQKT
Sbjct: 181 MYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSL-HDAGNPKSQKT 240

Query: 241 LTKIIASKVRLHATLQK 258
           L +IIASKVRLHA +QK
Sbjct: 241 LAEIIASKVRLHAMMQK 256

[Close]

BLAST of Moc08g36000 vs. ExPASy TrEMBL
Match: A0A6J1J4E3 (double-stranded RNA-binding protein 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482525 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 9.2e-100
Identity = 197/257 (76.65%), Postives = 217/257 (84.44%), Query Frame = 0


Query: 1   MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSA 60
           MVE SG + A   QQ SFPPDSAPA VPA IPVE S   Q  +D RPP VLP A+  PS+
Sbjct: 1   MVEESGTVEAVPQQQSSFPPDSAPAVVPALIPVEDSNTPQLESDTRPPPVLPGAILIPSS 60

Query: 61  APAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVH 120
           A AP+SSP PSD TQ F+YK+ LHEY Q+SRIPLPVYQT  EGS G+PKYRSTV+VDEVH
Sbjct: 61  ASAPVSSPKPSDLTQLFLYKNHLHEYTQKSRIPLPVYQTFDEGSQGIPKYRSTVVVDEVH 120

Query: 121 YVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRP 180
           YVSPNTFRNRR AE DAARIALEYISK+ KDDGF+LL EDLM CKSILSEYTVKM+LKRP
Sbjct: 121 YVSPNTFRNRRAAEQDAARIALEYISKKAKDDGFVLLHEDLMLCKSILSEYTVKMSLKRP 180

Query: 181 LYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKT 240
           +YTT  H+GSVPIFQSTLVFDGVVYTG++SRSKKEAEQLAARAAILSL  DAGNP+SQKT
Sbjct: 181 MYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSL-HDAGNPKSQKT 240

Query: 241 LTKIIASKVRLHATLQK 258
           L +IIASKVRLHA +QK
Sbjct: 241 LAEIIASKVRLHAMMQK 256

[Close]

BLAST of Moc08g36000 vs. TAIR 10
Match: AT1G09700.1 (dsRNA-binding domain-like superfamily protein )

HSP 1 Score: 107.1 bits (266), Expect = 2.4e-23
Identity = 63/172 (36.63%), Postives = 97/172 (56.40%), Query Frame = 0


Query: 66  SSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPN 125
           S+ + S  +  +++KS+L EYAQ+ ++P PVY+ V EG      ++STV++D V Y S  
Sbjct: 3   STDVSSGVSNCYVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLP 62

Query: 126 TFRNRRGAEHDAARIALEYISKRTKDDGFLLLQ-EDLMFCKSILSEYTVKMNLKRPLYTT 185
            F NR+ AE  AA +AL  ++K ++    +     +   CK++L EY  KMN   PLY  
Sbjct: 63  GFFNRKAAEQSAAEVALRELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLYQC 122

Query: 186 NHHD--GSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGN 235
              +  G V  F  T+   G+ YTG  +R+KK+AE  A R A+L++  D  N
Sbjct: 123 QKVETLGRVTQFTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQSDTKN 174

[Close]

BLAST of Moc08g36000 vs. TAIR 10
Match: AT2G28380.1 (dsRNA-binding protein 2 )

HSP 1 Score: 85.1 bits (209), Expect = 9.6e-17
Identity = 55/154 (35.71%), Postives = 83/154 (53.90%), Query Frame = 0


Query: 78  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDA 137
           +YK+QL E AQRS   LP Y  + EG    P++++TV  +   + SP      R AEH A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 138 ARIALEYISKRTKDDGFL--LLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHD-GSVPIF 197
           A +AL  +S R         +L E  ++ K++L E   ++    P YTT     G  P+F
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVY-KNLLQEIAQRVGAPLPRYTTFRSGLGHQPVF 120

Query: 198 QSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSL 229
             T+   G+ +TG+ +++KK+AE+ AA AA  SL
Sbjct: 121 TGTVELAGITFTGDPAKNKKQAEKNAAMAAWSSL 153

[Close]

BLAST of Moc08g36000 vs. TAIR 10
Match: AT3G26932.1 (dsRNA-binding protein 3 )

HSP 1 Score: 79.0 bits (193), Expect = 6.9e-15
Identity = 53/154 (34.42%), Postives = 83/154 (53.90%), Query Frame = 0


Query: 78  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDA 137
           +YK+QL E AQRS   LP Y    EG    P+++++V  +   + SP      R AEH A
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 138 ARIALEYISKR--TKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTT-NHHDGSVPIF 197
           A +AL  +S +  +K     +L E  ++ K++L E   +  L  P+YT+     G +P F
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIY-KNLLQETAHRAGLDLPVYTSVRSGPGHIPTF 120

Query: 198 QSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSL 229
             T+   G+ + G  +++KK+AE+ AA AA  SL
Sbjct: 121 SCTVELAGMSFNGESAKTKKQAEKNAAIAAWFSL 153

[Close]

BLAST of Moc08g36000 vs. TAIR 10
Match: AT3G26932.2 (dsRNA-binding protein 3 )

HSP 1 Score: 79.0 bits (193), Expect = 6.9e-15
Identity = 53/154 (34.42%), Postives = 83/154 (53.90%), Query Frame = 0


Query: 78  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDA 137
           +YK+QL E AQRS   LP Y    EG    P+++++V  +   + SP      R AEH A
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 138 ARIALEYISKR--TKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTT-NHHDGSVPIF 197
           A +AL  +S +  +K     +L E  ++ K++L E   +  L  P+YT+     G +P F
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIY-KNLLQETAHRAGLDLPVYTSVRSGPGHIPTF 120

Query: 198 QSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSL 229
             T+   G+ + G  +++KK+AE+ AA AA  SL
Sbjct: 121 SCTVELAGMSFNGESAKTKKQAEKNAAIAAWFSL 153

[Close]

BLAST of Moc08g36000 vs. TAIR 10
Match: AT5G41070.1 (dsRNA-binding protein 5 )

HSP 1 Score: 77.0 bits (188), Expect = 2.6e-14
Identity = 50/153 (32.68%), Postives = 79/153 (51.63%), Query Frame = 0


Query: 78  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDA 137
           +YK+QL E AQRS   LP Y  + EG    P+++++V  +   + SP      R AEH A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 138 ARIALEYISKRTKDDGFLL-LQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDG-SVPIFQ 197
           A ++L  +S R         + ++    K++L E   +  L  P+YT+        P F 
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 198 STLVFDGVVYTGNLSRSKKEAEQLAARAAILSL 229
            T+   G+ +TG  +++KK+AE+ AA AA  SL
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSL 153

The following BLAST results are available for this feature:

BLAST of Moc08g36000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143455.1	4.5e-149	100.00	double-stranded RNA-binding protein 4-like isoform X2 [Momordica charantia]	[more]
XP_022143454.1	9.6e-136	100.00	double-stranded RNA-binding protein 4-like isoform X1 [Momordica charantia]	[more]
XP_023526614.1	1.0e-100	77.43	double-stranded RNA-binding protein 4-like isoform X1 [Cucurbita pepo subsp. pep...	[more]
XP_022984143.1	1.9e-99	76.65	double-stranded RNA-binding protein 4-like isoform X3 [Cucurbita maxima]	[more]
XP_022935533.1	1.9e-99	76.65	double-stranded RNA-binding protein 4-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Moc08g36000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6YW64	1.4e-25	36.54	Double-stranded RNA-binding protein 4 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
O04492	3.3e-22	36.63	Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRB1 PE...	[more]
Q0DJA3	7.4e-22	32.70	Double-stranded RNA-binding protein 3 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q0IQN6	7.4e-22	32.55	Double-stranded RNA-binding protein 8 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q0IV63	1.3e-21	32.67	Double-stranded RNA-binding protein 7 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of Moc08g36000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNV0	2.2e-149	100.00	double-stranded RNA-binding protein 4-like isoform X2 OS=Momordica charantia OX=...	[more]
A0A6J1CPC5	4.7e-136	100.00	double-stranded RNA-binding protein 4-like isoform X1 OS=Momordica charantia OX=...	[more]
A0A6J1J9P9	9.2e-100	76.65	double-stranded RNA-binding protein 4-like isoform X3 OS=Cucurbita maxima OX=366...	[more]
A0A6J1J1D4	9.2e-100	76.65	double-stranded RNA-binding protein 4-like isoform X2 OS=Cucurbita maxima OX=366...	[more]
A0A6J1J4E3	9.2e-100	76.65	double-stranded RNA-binding protein 4-like isoform X1 OS=Cucurbita maxima OX=366...	[more]

BLAST of Moc08g36000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09700.1	2.4e-23	36.63	dsRNA-binding domain-like superfamily protein	[more]
AT2G28380.1	9.6e-17	35.71	dsRNA-binding protein 2	[more]
AT3G26932.1	6.9e-15	34.42	dsRNA-binding protein 3	[more]
AT3G26932.2	6.9e-15	34.42	dsRNA-binding protein 3	[more]
AT5G41070.1	2.6e-14	32.68	dsRNA-binding protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 79..146 e-value: 1.5E-10 score: 51.1 coord: 164..229 e-value: 1.1E-9 score: 48.2
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 79..144 e-value: 4.1E-8 score: 33.8 coord: 165..228 e-value: 1.3E-10 score: 41.9
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 78..147 score: 10.970051
None	No IPR available	GENE3D	3.30.160.20		coord: 156..232 e-value: 1.1E-17 score: 65.4 coord: 66..151 e-value: 1.4E-17 score: 65.0
None	No IPR available	PANTHER	PTHR11207:SF26	DOUBLE-STRANDED RNA-BINDING PROTEIN 4	coord: 67..258
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 75..146
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 161..228
IPR011907	Ribonuclease III	PANTHER	PTHR11207	RIBONUCLEASE III	coord: 67..258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g36000.1	Moc08g36000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0016075	rRNA catabolic process
molecular_function	GO:0004525	ribonuclease III activity
molecular_function	GO:0003723	RNA binding