Moc08g35120 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g35120
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	beta glucosidase 11
Location	chr8: 25686971 .. 25688802 (+)
RNA-Seq Expression	Moc08g35120
Synteny	Moc08g35120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAATTTGGGTGTGTTTTTGGTATTTTGGATGCTGTTAAATTCAAGTTTAGGAGCCGTTGGTGATTACAATAGACATGATTTTCCATCTGATTTTGTTTTTGGCTCTGGCACAACAGCTTATCAGGTCAGTTGTTTCTTGAACGTAATTCAAGAATTTATGGTGGTACCTATCGTCCGGCTTTAGTTATTTTACCTCTGGTTCATAGTGATGTTTATACTCGTCTTATAACTTGATGGGATGGTGATTATCCTAGAGTCAAAAAACTTTGACGGGTTTTGATTGGGATTTAATTTCATATAATTGAGTTACTTTTATTTTCTAGTTCAGATGTTTATGTTTATATTTTTTAACGGTGTTTGTTCTTGTTGTTCTTGTTCTGGTTCTTGTTTCTGCTACATTTTTATTGACAAGTTTTCTTTATCTTATTGTGCTTTGATCTCGAGCCACGACCAAACACTTTAATTTCCTTGCAATATACTCCTAATTAACCTTCACAAAAAAGAAAAGAAAAAGTACTTCACTAGAAAGCACTTAAATCATACCTACTCTTGACGTATATTTCAAAAGTGCTAATAGAAAAGATGTTTCACTTGAAAATATTGTTTTTCACGATTCGTCGTTGTCGCAATGTCATCGCGACGCGGAGCGGCTGACGGTATCCCCTGAAGGGTCTCTTTTGAGATAGGGGTTTGGAGTCGCCACCAATCATATACGAGGTATGATTGGTCACCTATTTAAAAAAACGGACAAGATGGTCTGCGAAAATAGAGTTTTAGTTCGGAAGTCGATTTGTGTGTAGGGAAGGTGTTAGCACCCCACAACACCCGTTCGAAAACGATACCACATTTTATCATAAATCATCCTATTGTTTTACTTGGTCTGGAAAGAAAATAATTTTGTATTTTTGTTTAAATGTCTCACAGTTTACTAATTCATATTTTGCAATAAAATATGAACCCAATAATTGTGAGTGACACGAAGGCCATTAAGAAAAAGTTTATCACCTCGGGAATATTGGAAATTCCAATTTCCGTCCTTGGAGTTTTTGAAAAAATAGAAGAAGAAAAAAAAATAATAAATAAATAAAATAATAAATAAATAAATAACAATTCCCTTGGAGAGGCTTAATCTCGAGCCTTGGATGTGAATACCTCAGTCTTTAGCCACTAAGCCATGTTTTGGTTTATAACTTAATTTCTTTTGAAAATAAAACCTTTGAAAATTTTATTTCTAAAATAAAAATCGAAATCTTATCTTTCTTTAAAGACTTTAATTTTAAACAAGATTCCTTAAAAAAAAAATCCGTTTTAAAAAAAAAGAAAAAAAAATTAATTTCTTTCAAAATTTTACTTTTTTCAAAGACAAAACAAAACAAGCATTTATCAATTTTTTAAATTAGCATTTAAGTTTTTTGGTATTTTAAACAAAAAAAAACTGTTAGTTTTAGTTTTAAGAAAAAAAAAATACTTCTTTCTCCACCTCTGTTGGTCGGGTCCGAGGTCTTCACGCGAGTCGTCGGAGCTTTACACACGTGTCGTGGGTCGCGGAGTTGTTGTGCGCGGGCTGGATTCGGAGCCAGGAGGTTCGCTGGTCGGAGGTTGCTGTAGGGGGAAATCGCCGCTGTTCGTGTCACGCCGCCGTTGCTGTCGGGCCGCCGGGCTGGAGCTGCTGCGCAGGGAAGGTCGTCAATCGCCGGTGAAGGTGCTCGGGTTGAATCCGGCGTGTCGCGGCGCAGGGTTGCCGAGGGCGCGGATTGGGTGCCGCCGTCGTGGGCCTTACTCGTCGGAGTACGGCCGGAGTTGGTAGCTGATGGTGGCCGGATCTGA

mRNA sequence

ATGTCAAATTTGGGTGTGTTTTTGGTATTTTGGATGCTGTTAAATTCAAGTTTAGGAGCCGTTGGTGATTACAATAGACATGATTTTCCATCTGATTTTGTTTTTGGCTCTGGCACAACAGCTTATCAGGGGGAAATCGCCGCTGTTCGTGTCACGCCGCCGTTGCTGTCGGGCCGCCGGGCTGGAGCTGCTGCGCAGGGAAGGTCGTCAATCGCCGGTGAAGGTGCTCGGGTTGAATCCGGCGTGTCGCGGCGCAGGGTTGCCGAGGGCGCGGATTGGGTGCCGCCGTCGTGGGCCTTACTCGTCGGAGTACGGCCGGAGTTGGTAGCTGATGGTGGCCGGATCTGA

Coding sequence (CDS)

ATGTCAAATTTGGGTGTGTTTTTGGTATTTTGGATGCTGTTAAATTCAAGTTTAGGAGCCGTTGGTGATTACAATAGACATGATTTTCCATCTGATTTTGTTTTTGGCTCTGGCACAACAGCTTATCAGGGGGAAATCGCCGCTGTTCGTGTCACGCCGCCGTTGCTGTCGGGCCGCCGGGCTGGAGCTGCTGCGCAGGGAAGGTCGTCAATCGCCGGTGAAGGTGCTCGGGTTGAATCCGGCGTGTCGCGGCGCAGGGTTGCCGAGGGCGCGGATTGGGTGCCGCCGTCGTGGGCCTTACTCGTCGGAGTACGGCCGGAGTTGGTAGCTGATGGTGGCCGGATCTGA

Protein sequence

MSNLGVFLVFWMLLNSSLGAVGDYNRHDFPSDFVFGSGTTAYQGEIAAVRVTPPLLSGRRAGAAAQGRSSIAGEGARVESGVSRRRVAEGADWVPPSWALLVGVRPELVADGGRI

Homology

[Close]

BLAST of Moc08g35120 vs. NCBI nr
Match: XP_038905447.1 (beta-glucosidase 11-like [Benincasa hispida])

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-04
Identity = 33/52 (63.46%), Postives = 39/52 (75.00%), Query Frame = 0


Query: 1  MSNLGVFL-VFWMLLNSSLGAVG---DYNRHDFPSDFVFGSGTTAYQGEIAA 49
          MS LG+ + +  +LLNSSLGAV    DY+R+DFP  FVFGSGTTAYQ E AA
Sbjct: 1  MSYLGLVIGLLLLLLNSSLGAVAVTYDYSRNDFPPSFVFGSGTTAYQVEGAA 52

[Close]

BLAST of Moc08g35120 vs. NCBI nr
Match: AES61791.2 (glycoside hydrolase family 1 protein [Medicago truncatula])

HSP 1 Score: 56.2 bits (134), Expect = 2.1e-04
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 0


Query: 2  SNLGVFLVFWMLLNSSLGAVG--DYNRHDFPSDFVFGSGTTAYQGEIAA 49
          +N  + LVF++LLN +LG +   +Y RHDFP DFVFGSGT+AYQ E AA
Sbjct: 3  ANTCLTLVFFLLLNLALGVLSTDNYGRHDFPVDFVFGSGTSAYQVEGAA 51

[Close]

BLAST of Moc08g35120 vs. NCBI nr
Match: RHN81124.1 (putative hydroxyisourate hydrolase [Medicago truncatula])

HSP 1 Score: 56.2 bits (134), Expect = 2.1e-04
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 0


Query: 2  SNLGVFLVFWMLLNSSLGAVG--DYNRHDFPSDFVFGSGTTAYQGEIAA 49
          +N  + LVF++LLN +LG +   +Y RHDFP DFVFGSGT+AYQ E AA
Sbjct: 3  ANTCLTLVFFLLLNLALGVLSTDNYGRHDFPVDFVFGSGTSAYQVEGAA 51

[Close]

BLAST of Moc08g35120 vs. NCBI nr
Match: XP_039685761.1 (hydroxyisourate hydrolase-like isoform X1 [Medicago truncatula])

HSP 1 Score: 56.2 bits (134), Expect = 2.1e-04
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 0


Query: 2  SNLGVFLVFWMLLNSSLGAVG--DYNRHDFPSDFVFGSGTTAYQGEIAA 49
          +N  + LVF++LLN +LG +   +Y RHDFP DFVFGSGT+AYQ E AA
Sbjct: 3  ANTCLTLVFFLLLNLALGVLSTDNYGRHDFPVDFVFGSGTSAYQVEGAA 51

[Close]

BLAST of Moc08g35120 vs. NCBI nr
Match: AES61789.2 (glycoside hydrolase family 1 protein [Medicago truncatula])

HSP 1 Score: 56.2 bits (134), Expect = 2.1e-04
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 0


Query: 2  SNLGVFLVFWMLLNSSLGAVG--DYNRHDFPSDFVFGSGTTAYQGEIAA 49
          +N  + LVF++LLN +LG +   +Y RHDFP DFVFGSGT+AYQ E AA
Sbjct: 3  ANTCLTLVFFLLLNLALGVLSTDNYGRHDFPVDFVFGSGTSAYQVEGAA 51

[Close]

BLAST of Moc08g35120 vs. ExPASy Swiss-Prot
Match: Q8S3J3 (Hydroxyisourate hydrolase OS=Glycine max OX=3847 GN=HIUH PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.7e-04
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0


Query: 4  LGVFLVFW--MLLNSSLGAVG--DYNRHDFPSDFVFGSGTTAYQGEIAA 49
          + VF+V +  +L+N  +G +G  +Y+R DFP DFVFGSGT+AYQ E AA
Sbjct: 11 INVFIVSFLALLVNLVVGVLGADNYSRDDFPLDFVFGSGTSAYQVEGAA 59

[Close]

BLAST of Moc08g35120 vs. ExPASy Swiss-Prot
Match: Q8RZL1 (Beta-glucosidase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU3 PE=2 SV=2)

HSP 1 Score: 45.4 bits (106), Expect = 4.9e-04
Identity = 21/48 (43.75%), Postives = 30/48 (62.50%), Query Frame = 0


Query: 1  MSNLGVFLVFWMLLNSSLGAVGDYNRHDFPSDFVFGSGTTAYQGEIAA 49
          M+    F    + ++   G +G Y R+DFP+DFVFG+ T+AYQ E AA
Sbjct: 1  MAAAAAFFCALLFISVQHGVLGGYTRNDFPADFVFGAATSAYQYEGAA 48

[Close]

BLAST of Moc08g35120 vs. ExPASy TrEMBL
Match: G7IF67 (Glycoside hydrolase family 1 protein OS=Medicago truncatula OX=3880 GN=MTR_1g088630 PE=3 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 1.0e-04
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 0


Query: 2  SNLGVFLVFWMLLNSSLGAVG--DYNRHDFPSDFVFGSGTTAYQGEIAA 49
          +N  + LVF++LLN +LG +   +Y RHDFP DFVFGSGT+AYQ E AA
Sbjct: 3  ANTCLTLVFFLLLNLALGVLSTDNYGRHDFPVDFVFGSGTSAYQVEGAA 51

[Close]

BLAST of Moc08g35120 vs. ExPASy TrEMBL
Match: G7IF69 (Glycoside hydrolase family 1 protein OS=Medicago truncatula OX=3880 GN=MTR_1g088630 PE=3 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 1.0e-04
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 0


Query: 2  SNLGVFLVFWMLLNSSLGAVG--DYNRHDFPSDFVFGSGTTAYQGEIAA 49
          +N  + LVF++LLN +LG +   +Y RHDFP DFVFGSGT+AYQ E AA
Sbjct: 3  ANTCLTLVFFLLLNLALGVLSTDNYGRHDFPVDFVFGSGTSAYQVEGAA 51

[Close]

BLAST of Moc08g35120 vs. ExPASy TrEMBL
Match: A0A396JV33 (Putative hydroxyisourate hydrolase OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr1g0195641 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.0e-04
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 0


Query: 2  SNLGVFLVFWMLLNSSLGAVG--DYNRHDFPSDFVFGSGTTAYQGEIAA 49
          +N  + LVF++LLN +LG +   +Y RHDFP DFVFGSGT+AYQ E AA
Sbjct: 3  ANTCLTLVFFLLLNLALGVLSTDNYGRHDFPVDFVFGSGTSAYQVEGAA 51

[Close]

BLAST of Moc08g35120 vs. ExPASy TrEMBL
Match: G7IF65 (Glycoside hydrolase family 1 protein OS=Medicago truncatula OX=3880 GN=MTR_1g088610 PE=3 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 2.3e-04
Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 8  LVFWMLLNSSLGAVG--DYNRHDFPSDFVFGSGTTAYQGEIAA 49
          LVF++L+N ++G +   DY+RHDFP DFVFGSGT+AYQ E AA
Sbjct: 9  LVFFVLVNLAVGVLSTDDYSRHDFPVDFVFGSGTSAYQVEGAA 51

[Close]

BLAST of Moc08g35120 vs. ExPASy TrEMBL
Match: A0A396JU98 (Putative hydroxyisourate hydrolase OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr1g0195611 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.3e-04
Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 8  LVFWMLLNSSLGAVG--DYNRHDFPSDFVFGSGTTAYQGEIAA 49
          LVF++L+N ++G +   DY+RHDFP DFVFGSGT+AYQ E AA
Sbjct: 9  LVFFVLVNLAVGVLSTDDYSRHDFPVDFVFGSGTSAYQVEGAA 51

[Close]

BLAST of Moc08g35120 vs. TAIR 10
Match: AT1G02850.1 (beta glucosidase 11 )

HSP 1 Score: 43.5 bits (101), Expect = 1.3e-04
Identity = 27/50 (54.00%), Postives = 32/50 (64.00%), Query Frame = 0


Query: 1  MSNLGVFLVFWMLLNSSLGAVGD--YNRHDFPSDFVFGSGTTAYQGEIAA 49
          M  L   L+F  LL  +L AV    Y+R+DFP  FVFGSGT+AYQ E AA
Sbjct: 1  MKLLSNSLMFLPLLALALTAVSSLKYSRNDFPPGFVFGSGTSAYQVEGAA 50

[Close]

BLAST of Moc08g35120 vs. TAIR 10
Match: AT1G02850.3 (beta glucosidase 11 )

HSP 1 Score: 43.5 bits (101), Expect = 1.3e-04
Identity = 27/50 (54.00%), Postives = 32/50 (64.00%), Query Frame = 0


Query: 1  MSNLGVFLVFWMLLNSSLGAVGD--YNRHDFPSDFVFGSGTTAYQGEIAA 49
          M  L   L+F  LL  +L AV    Y+R+DFP  FVFGSGT+AYQ E AA
Sbjct: 1  MKLLSNSLMFLPLLALALTAVSSLKYSRNDFPPGFVFGSGTSAYQVEGAA 50

[Close]

BLAST of Moc08g35120 vs. TAIR 10
Match: AT1G02850.2 (beta glucosidase 11 )

HSP 1 Score: 43.5 bits (101), Expect = 1.3e-04
Identity = 27/50 (54.00%), Postives = 32/50 (64.00%), Query Frame = 0


Query: 1  MSNLGVFLVFWMLLNSSLGAVGD--YNRHDFPSDFVFGSGTTAYQGEIAA 49
          M  L   L+F  LL  +L AV    Y+R+DFP  FVFGSGT+AYQ E AA
Sbjct: 1  MKLLSNSLMFLPLLALALTAVSSLKYSRNDFPPGFVFGSGTSAYQVEGAA 50

[Close]

BLAST of Moc08g35120 vs. TAIR 10
Match: AT1G02850.4 (beta glucosidase 11 )

HSP 1 Score: 43.5 bits (101), Expect = 1.3e-04
Identity = 27/50 (54.00%), Postives = 32/50 (64.00%), Query Frame = 0


Query: 1  MSNLGVFLVFWMLLNSSLGAVGD--YNRHDFPSDFVFGSGTTAYQGEIAA 49
          M  L   L+F  LL  +L AV    Y+R+DFP  FVFGSGT+AYQ E AA
Sbjct: 1  MKLLSNSLMFLPLLALALTAVSSLKYSRNDFPPGFVFGSGTSAYQVEGAA 50

[Close]

BLAST of Moc08g35120 vs. TAIR 10
Match: AT1G02850.5 (beta glucosidase 11 )

HSP 1 Score: 43.5 bits (101), Expect = 1.3e-04
Identity = 27/50 (54.00%), Postives = 32/50 (64.00%), Query Frame = 0


Query: 1  MSNLGVFLVFWMLLNSSLGAVGD--YNRHDFPSDFVFGSGTTAYQGEIAA 49
          M  L   L+F  LL  +L AV    Y+R+DFP  FVFGSGT+AYQ E AA
Sbjct: 1  MKLLSNSLMFLPLLALALTAVSSLKYSRNDFPPGFVFGSGTSAYQVEGAA 50

The following BLAST results are available for this feature:

BLAST of Moc08g35120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905447.1	1.2e-04	63.46	beta-glucosidase 11-like [Benincasa hispida]	[more]
AES61791.2	2.1e-04	59.18	glycoside hydrolase family 1 protein [Medicago truncatula]	[more]
RHN81124.1	2.1e-04	59.18	putative hydroxyisourate hydrolase [Medicago truncatula]	[more]
XP_039685761.1	2.1e-04	59.18	hydroxyisourate hydrolase-like isoform X1 [Medicago truncatula]	[more]
AES61789.2	2.1e-04	59.18	glycoside hydrolase family 1 protein [Medicago truncatula]	[more]

BLAST of Moc08g35120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S3J3	1.7e-04	53.06	Hydroxyisourate hydrolase OS=Glycine max OX=3847 GN=HIUH PE=1 SV=1	[more]
Q8RZL1	4.9e-04	43.75	Beta-glucosidase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU3 PE=2 SV=2	[more]

BLAST of Moc08g35120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
G7IF67	1.0e-04	59.18	Glycoside hydrolase family 1 protein OS=Medicago truncatula OX=3880 GN=MTR_1g088...	[more]
G7IF69	1.0e-04	59.18	Glycoside hydrolase family 1 protein OS=Medicago truncatula OX=3880 GN=MTR_1g088...	[more]
A0A396JV33	1.0e-04	59.18	Putative hydroxyisourate hydrolase OS=Medicago truncatula OX=3880 GN=MtrunA17_Ch...	[more]
G7IF65	2.3e-04	62.79	Glycoside hydrolase family 1 protein OS=Medicago truncatula OX=3880 GN=MTR_1g088...	[more]
A0A396JU98	2.3e-04	62.79	Putative hydroxyisourate hydrolase OS=Medicago truncatula OX=3880 GN=MtrunA17_Ch...	[more]

BLAST of Moc08g35120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02850.1	1.3e-04	54.00	beta glucosidase 11	[more]
AT1G02850.3	1.3e-04	54.00	beta glucosidase 11	[more]
AT1G02850.2	1.3e-04	54.00	beta glucosidase 11	[more]
AT1G02850.4	1.3e-04	54.00	beta glucosidase 11	[more]
AT1G02850.5	1.3e-04	54.00	beta glucosidase 11	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g35120.1	Moc08g35120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0008422	beta-glucosidase activity