Moc08g10380 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g10380
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrovirus-related Pol polyprotein from transposon RE1
Location	chr8: 7708399 .. 7709016 (+)
RNA-Seq Expression	Moc08g10380
Synteny	Moc08g10380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCTAACATTAAGCTTCTTGCTTCTGCTGGTGATATCTTAGAGGATCCTACTATGTATCAGTGTATTATTGGGTGTCTCATTTACCTCACTATTTCTCGGTCTGACATTACCTTTGTTGTACATTACCTCAGTCAATTTGTATCACAGCCTCGTTGCCCACATCTTGATGCTGCTTATCATCTTCTGCGCTACTTGAAAGGTTGTTCTGGGCAAGGTTTATTTCTTTCCAGTTTGTCATCTTTTCAAATTCGGGCTTTCTGTGATGCTGATTGGGCATCTTGCTTGGATTCGAGAAAGTCTACAACCGGGTTTTGCATCTTCCTTGGTGAGTCTCTTGTGTCTTGGAAGGCCAAAAAGCAAACCACGGTCTCTCGCTCCTCTGCCGATGCTGAATATCATGCGCTCGCTGCTACAACGAGCAAAATCATAAGGCTCACTTATTGCTTCGTGATTTACATATTCAGTTTCAACCACCAGAGCTGCTTTTCTGTGATAATAATGCTACTATTCACATTGCTTCGAACCCGTCTTTTCATGAACGTACCAAGCACATTGAGCTTGATTGTCATTTTGTTCGTGAAAAGATCGTTGAAGGCATCGTCAAGCTTCTGA

mRNA sequence

ATGGATCCTAACATTAAGCTTCTTGCTTCTGCTGGTGATATCTTAGAGGATCCTACTATGTATCAGTGTATTATTGGGTGTCTCATTTACCTCACTATTTCTCGGTCTGACATTACCTTTGTTGTACATTACCTCAGTCAATTTGTATCACAGCCTCGTTGCCCACATCTTGATGCTGCTTATCATCTTCTGCGCTACTTGAAAGGTTGTTCTGGGCAAGGTTTATTTCTTTCCAGTTTGTCATCTTTTCAAATTCGGGCTTTCTGTGATGCTGATTGGGCATCTTGCTTGGATTCGAGAAAGTCTACAACCGGGTTTTGCATCTTCCTTGGTGAGTCTCTTGTGTCTTGGAAGGCCAAAAAGCAAACCACGGTCTCTCGCTCCTCTGCCGATGCTGAATATCATGCGCTCGCTGCTACAACGAGCAAAATCATAAGGCTCACTTATTGCTTCGTGATTTACATATTCAGTTTCAACCACCAGAGCTGCTTTTCTGTGATAATAATGCTACTATTCACATTGCTTCGAACCCGTCTTTTCATGAACGTACCAAGCACATTGAGCTTGATTGTCATTTTGTTCGTGAAAAGATCGTTGAAGGCATCGTCAAGCTTCTGA

Coding sequence (CDS)

ATGGATCCTAACATTAAGCTTCTTGCTTCTGCTGGTGATATCTTAGAGGATCCTACTATGTATCAGTGTATTATTGGGTGTCTCATTTACCTCACTATTTCTCGGTCTGACATTACCTTTGTTGTACATTACCTCAGTCAATTTGTATCACAGCCTCGTTGCCCACATCTTGATGCTGCTTATCATCTTCTGCGCTACTTGAAAGGTTGTTCTGGGCAAGGTTTATTTCTTTCCAGTTTGTCATCTTTTCAAATTCGGGCTTTCTGTGATGCTGATTGGGCATCTTGCTTGGATTCGAGAAAGTCTACAACCGGGTTTTGCATCTTCCTTGGTGAGTCTCTTGTGTCTTGGAAGGCCAAAAAGCAAACCACGGTCTCTCGCTCCTCTGCCGATGCTGAATATCATGCGCTCGCTGCTACAACGAGCAAAATCATAAGGCTCACTTATTGCTTCGTGATTTACATATTCAGTTTCAACCACCAGAGCTGCTTTTCTGTGATAATAATGCTACTATTCACATTGCTTCGAACCCGTCTTTTCATGAACGTACCAAGCACATTGAGCTTGATTGTCATTTTGTTCGTGAAAAGATCGTTGAAGGCATCGTCAAGCTTCTGA

Protein sequence

MDPNIKLLASAGDILEDPTMYQCIIGCLIYLTISRSDITFVVHYLSQFVSQPRCPHLDAAYHLLRYLKGCSGQGLFLSSLSSFQIRAFCDADWASCLDSRKSTTGFCIFLGESLVSWKAKKQTTVSRSSADAEYHALAATTSKIIRLTYCFVIYIFSFNHQSCFSVIIMLLFTLLRTRLFMNVPSTLSLIVILFVKRSLKASSSF

Homology

[Close]

BLAST of Moc08g10380 vs. NCBI nr
Match: XP_022153428.1 (uncharacterized protein LOC111020937 [Momordica charantia])

HSP 1 Score: 306.6 bits (784), Expect = 1.6e-79
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 47  QFVSQPRCPHLDAAYHLLRYLKGCSGQGLFLSSLSSFQIRAFCDADWASCLDSRKSTTGF 106
           QFVSQPRCPHLDAAYHLLRYLKGCSGQGLFLSSLSSFQIRAFCDADWASCLDSRKSTTGF
Sbjct: 38  QFVSQPRCPHLDAAYHLLRYLKGCSGQGLFLSSLSSFQIRAFCDADWASCLDSRKSTTGF 97

Query: 107 CIFLGESLVSWKAKKQTTVSRSSADAEYHALAATTSKIIRLTYCFVIYIFSFNHQSCFSV 166
           CIFLGESLVSWKAKKQTTVSRSSADAEYHALAATTSKIIRLTYCFVIYIFSFNHQSCFSV
Sbjct: 98  CIFLGESLVSWKAKKQTTVSRSSADAEYHALAATTSKIIRLTYCFVIYIFSFNHQSCFSV 157

Query: 167 IIMLLFTLLRTRLFMNVPSTLSLIVILFVKRSLKASSSF 206
           IIMLLFTLLRTRLFMNVPSTLSLIVILFVKRSLKASSSF
Sbjct: 158 IIMLLFTLLRTRLFMNVPSTLSLIVILFVKRSLKASSSF 196

[Close]

BLAST of Moc08g10380 vs. NCBI nr
Match: PON99369.1 (hypothetical protein TorRG33x02_049120 [Trema orientale])

HSP 1 Score: 205.3 bits (521), Expect = 5.0e-49
Identity = 100/147 (68.03%), Postives = 120/147 (81.63%), Query Frame = 0


Query: 1   MDPNIKLLASAGDILEDPTMYQCIIGCLIYLTISRSDITFVVHYLSQFVSQPRCPHLDAA 60
           MDP +KL  + GD+L D + Y+C IG L+YLT+S  DITF VH LSQF+S+PR PHL AA
Sbjct: 1   MDPKLKLSTTEGDLLPDASAYRCFIGRLLYLTLSHPDITFAVHKLSQFLSRPRLPHLKAA 60

Query: 61  YHLLRYLKGCSGQGLFLSSLSSFQIRAFCDADWASCLDSRKSTTGFCIFLGESLVSWKAK 120
           +HLLRYLK   GQGLF S+ SS Q++AF DADW SC D+RKS TGFCIFLG+SLVSWKAK
Sbjct: 61  HHLLRYLKHRPGQGLFFSASSSLQVKAFSDADWGSCPDTRKSVTGFCIFLGDSLVSWKAK 120

Query: 121 KQTTVSRSSADAEYHALAATTSKIIRL 148
           KQ+T+SRSSA+AEY ALAATTS+I+ L
Sbjct: 121 KQSTISRSSAEAEYRALAATTSEILCL 147

[Close]

BLAST of Moc08g10380 vs. NCBI nr
Match: XP_022132680.1 (uncharacterized protein LOC111005480 [Momordica charantia])

HSP 1 Score: 203.8 bits (517), Expect = 1.5e-48
Identity = 104/149 (69.80%), Postives = 124/149 (83.22%), Query Frame = 0


Query: 1   MDPNIKLLASAGDILEDPTMYQCIIGCLIYLTISRSDITFVVHYLSQFVSQPRCPHLDAA 60
           MDP +KL +S G +L+DPT Y+ +IG LIYLTISR DITFVVH LSQ+++     HL AA
Sbjct: 278 MDPTVKLSSSVGKLLDDPTAYRRLIGRLIYLTISRPDITFVVHKLSQYIA-----HLTAA 337

Query: 61  YHLLRYLKGCSGQGLFLSSLSSFQIRAFCDADWASCLDSRKSTTGFCIFLGESLVSWKAK 120
           +HLL+YLKG  GQG+FL S +SF +RAF D D ASCLDSRKSTTGFCIFLG+SLVSWKAK
Sbjct: 338 FHLLQYLKGSLGQGIFLKSSTSFHLRAFSDTDLASCLDSRKSTTGFCIFLGDSLVSWKAK 397

Query: 121 KQTTVSRSSADAEYHALAATTSKIIRLTY 150
           KQTTVSRSSA+AEY ALAATTS+I+ +T+
Sbjct: 398 KQTTVSRSSAEAEYQALAATTSEIVWITH 421

[Close]

BLAST of Moc08g10380 vs. NCBI nr
Match: XP_022899321.1 (uncharacterized protein LOC111412620 [Olea europaea var. sylvestris])

HSP 1 Score: 203.4 bits (516), Expect = 1.9e-48
Identity = 98/148 (66.22%), Postives = 120/148 (81.08%), Query Frame = 0


Query: 1   MDPNIKLLASAGDILEDPTMYQCIIGCLIYLTISRSDITFVVHYLSQFVSQPRCPHLDAA 60
           MDP +KL +  GD++ D +MY+ + G L+YLTISR DITF VH LSQFVSQPR PHLDAA
Sbjct: 150 MDPKLKLSSYEGDLIVDASMYRKLTGRLLYLTISRPDITFAVHKLSQFVSQPRQPHLDAA 209

Query: 61  YHLLRYLKGCSGQGLFLSSLSSFQIRAFCDADWASCLDSRKSTTGFCIFLGESLVSWKAK 120
           +HLL+Y+K   GQG+  S+ SS Q+RAF DADW SCLD+RKS  GFC+FLG+SL+SWKAK
Sbjct: 210 HHLLQYIKASPGQGILFSAQSSLQLRAFADADWGSCLDTRKSVAGFCVFLGDSLISWKAK 269

Query: 121 KQTTVSRSSADAEYHALAATTSKIIRLT 149
           KQTTVSRSSA+AEY ALA+T S++  LT
Sbjct: 270 KQTTVSRSSAEAEYRALASTASELTWLT 297

[Close]

BLAST of Moc08g10380 vs. NCBI nr
Match: XP_022155863.1 (uncharacterized protein LOC111022877 isoform X4 [Momordica charantia])

HSP 1 Score: 201.4 bits (511), Expect = 7.3e-48
Identity = 98/146 (67.12%), Postives = 117/146 (80.14%), Query Frame = 0


Query: 1   MDPNIKLLASAGDILEDPTMYQCIIGCLIYLTISRSDITFVVHYLSQFVSQPRCPHLDAA 60
           MDPNIKL AS G +L+DP++Y+ +IG L+YLTISR DITF VH LSQF++ P   HL A 
Sbjct: 157 MDPNIKLSASDGKLLDDPSVYRRLIGRLLYLTISRPDITFTVHKLSQFMAAPHTTHLAAV 216

Query: 61  YHLLRYLKGCSGQGLFLSSLSSFQIRAFCDADWASCLDSRKSTTGFCIFLGESLVSWKAK 120
           + L+RYLKGC GQ + L+   SFQ+RAF DADW SC DSRKSTTGFCIFLG+SLVSWKAK
Sbjct: 217 HSLIRYLKGCPGQEILLNPTKSFQLRAFADADWGSCFDSRKSTTGFCIFLGDSLVSWKAK 276

Query: 121 KQTTVSRSSADAEYHALAATTSKIIR 147
           KQ+T+ RSS +AEY ALAAT S+I R
Sbjct: 277 KQSTIFRSSTEAEYRALAATVSEITR 302

[Close]

BLAST of Moc08g10380 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.3e-28
Identity = 58/128 (45.31%), Postives = 87/128 (67.97%), Query Frame = 0


Query: 17  DPTMYQCIIGCLIYLTISRSDITFVVHYLSQFVSQPRCPHLDAAYHLLRYLKGCSGQGLF 76
           DP+ ++ I+G L YLT++R DI++ V+ + Q + +P     D    +LRY+KG    GL+
Sbjct: 96  DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLY 155

Query: 77  LSSLSSFQIRAFCDADWASCLDSRKSTTGFCIFLGESLVSWKAKKQTTVSRSSADAEYHA 136
           +   S   ++AFCD+DWA C  +R+STTGFC FLG +++SW AK+Q TVSRSS + EY A
Sbjct: 156 IHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRA 215

Query: 137 LAATTSKI 145
           LA T +++
Sbjct: 216 LALTAAEL 223

[Close]

BLAST of Moc08g10380 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 8.1e-26
Identity = 69/165 (41.82%), Postives = 95/165 (57.58%), Query Frame = 0


Query: 1    MDPNIKLLASAGDILEDPTMYQCIIGCLIYLTISRSDITFVVHYLSQFVSQPRCPHLDAA 60
            M P+ KL   +G  L DPT Y+ I+G L YL  +R DI++ V+ LSQF+  P   HL A 
Sbjct: 1225 MAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQAL 1284

Query: 61   YHLLRYLKGCSGQGLFLSSLSSFQIRAFCDADWASCLDSRKSTTGFCIFLGESLVSWKAK 120
              +LRYL G    G+FL   ++  + A+ DADWA   D   ST G+ ++LG   +SW +K
Sbjct: 1285 KRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSK 1344

Query: 121  KQTTVSRSSADAEYHALAATTSKI-----------IRLTYCFVIY 155
            KQ  V RSS +AEY ++A T+S++           IRLT   VIY
Sbjct: 1345 KQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIY 1389

[Close]

BLAST of Moc08g10380 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.0e-24
Identity = 57/139 (41.01%), Postives = 85/139 (61.15%), Query Frame = 0


Query: 6    KLLASAGDILEDPTMYQCIIGCLIYLTISRSDITFVVHYLSQFVSQPRCPHLDAAYHLLR 65
            KL   +G  L DPT Y+ I+G L YL  +R D+++ V+ LSQ++  P   H +A   +LR
Sbjct: 1213 KLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLR 1272

Query: 66   YLKGCSGQGLFLSSLSSFQIRAFCDADWASCLDSRKSTTGFCIFLGESLVSWKAKKQTTV 125
            YL G    G+FL   ++  + A+ DADWA   D   ST G+ ++LG   +SW +KKQ  V
Sbjct: 1273 YLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGV 1332

Query: 126  SRSSADAEYHALAATTSKI 145
             RSS +AEY ++A T+S++
Sbjct: 1333 VRSSTEAEYRSVANTSSEL 1351

[Close]

BLAST of Moc08g10380 vs. ExPASy Swiss-Prot
Match: P93290 (Uncharacterized mitochondrial protein AtMg00240 OS=Arabidopsis thaliana OX=3702 GN=AtMg00240 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 7.4e-19
Identity = 44/79 (55.70%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 29  IYLTISRSDITFVVHYLSQFVSQPRCPHLDAAYHLLRYLKGCSGQGLFLSSLSSFQIRAF 88
           +YLTI+R D+TF V+ LSQF S  R   + A Y +L Y+KG  GQGLF S+ S  Q++AF
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 89  CDADWASCLDSRKSTTGFC 108
            D+DWASC D+R+S TGFC
Sbjct: 61  ADSDWASCPDTRRSVTGFC 79

[Close]

BLAST of Moc08g10380 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.9e-17
Identity = 49/129 (37.98%), Postives = 74/129 (57.36%), Query Frame = 0


Query: 21  YQCIIGCLIYL-TISRSDITFVVHYLSQFVSQPRCPHLDAAYHLLRYLKGCSGQGLFLSS 80
           Y   +G ++YL  ++R D+   V  LSQF S P   H  A   +LRYL+     GL  + 
Sbjct: 6   YLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYGLEFTR 65

Query: 81  LSSFQIRAFCDADWASCLDSRKSTTGFCIFLGESLVSWKAKKQTTVSRSSADAEYHALAA 140
             + ++  + DADWA  ++SR+ST+G+   L    VSW++KKQ TV+ SS + EY AL+ 
Sbjct: 66  AGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMALSE 125

Query: 141 TTSKIIRLT 149
            T + + LT
Sbjct: 126 ATQEAVWLT 134

[Close]

BLAST of Moc08g10380 vs. ExPASy TrEMBL
Match: A0A6J1DHF4 (uncharacterized protein LOC111020937 OS=Momordica charantia OX=3673 GN=LOC111020937 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 7.8e-80
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 47  QFVSQPRCPHLDAAYHLLRYLKGCSGQGLFLSSLSSFQIRAFCDADWASCLDSRKSTTGF 106
           QFVSQPRCPHLDAAYHLLRYLKGCSGQGLFLSSLSSFQIRAFCDADWASCLDSRKSTTGF
Sbjct: 38  QFVSQPRCPHLDAAYHLLRYLKGCSGQGLFLSSLSSFQIRAFCDADWASCLDSRKSTTGF 97

Query: 107 CIFLGESLVSWKAKKQTTVSRSSADAEYHALAATTSKIIRLTYCFVIYIFSFNHQSCFSV 166
           CIFLGESLVSWKAKKQTTVSRSSADAEYHALAATTSKIIRLTYCFVIYIFSFNHQSCFSV
Sbjct: 98  CIFLGESLVSWKAKKQTTVSRSSADAEYHALAATTSKIIRLTYCFVIYIFSFNHQSCFSV 157

Query: 167 IIMLLFTLLRTRLFMNVPSTLSLIVILFVKRSLKASSSF 206
           IIMLLFTLLRTRLFMNVPSTLSLIVILFVKRSLKASSSF
Sbjct: 158 IIMLLFTLLRTRLFMNVPSTLSLIVILFVKRSLKASSSF 196

[Close]

BLAST of Moc08g10380 vs. ExPASy TrEMBL
Match: A0A2P5FNK4 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_049120 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.4e-49
Identity = 100/147 (68.03%), Postives = 120/147 (81.63%), Query Frame = 0


Query: 1   MDPNIKLLASAGDILEDPTMYQCIIGCLIYLTISRSDITFVVHYLSQFVSQPRCPHLDAA 60
           MDP +KL  + GD+L D + Y+C IG L+YLT+S  DITF VH LSQF+S+PR PHL AA
Sbjct: 1   MDPKLKLSTTEGDLLPDASAYRCFIGRLLYLTLSHPDITFAVHKLSQFLSRPRLPHLKAA 60

Query: 61  YHLLRYLKGCSGQGLFLSSLSSFQIRAFCDADWASCLDSRKSTTGFCIFLGESLVSWKAK 120
           +HLLRYLK   GQGLF S+ SS Q++AF DADW SC D+RKS TGFCIFLG+SLVSWKAK
Sbjct: 61  HHLLRYLKHRPGQGLFFSASSSLQVKAFSDADWGSCPDTRKSVTGFCIFLGDSLVSWKAK 120

Query: 121 KQTTVSRSSADAEYHALAATTSKIIRL 148
           KQ+T+SRSSA+AEY ALAATTS+I+ L
Sbjct: 121 KQSTISRSSAEAEYRALAATTSEILCL 147

[Close]

BLAST of Moc08g10380 vs. ExPASy TrEMBL
Match: A0A6J1BT54 (uncharacterized protein LOC111005480 OS=Momordica charantia OX=3673 GN=LOC111005480 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 7.1e-49
Identity = 104/149 (69.80%), Postives = 124/149 (83.22%), Query Frame = 0


Query: 1   MDPNIKLLASAGDILEDPTMYQCIIGCLIYLTISRSDITFVVHYLSQFVSQPRCPHLDAA 60
           MDP +KL +S G +L+DPT Y+ +IG LIYLTISR DITFVVH LSQ+++     HL AA
Sbjct: 278 MDPTVKLSSSVGKLLDDPTAYRRLIGRLIYLTISRPDITFVVHKLSQYIA-----HLTAA 337

Query: 61  YHLLRYLKGCSGQGLFLSSLSSFQIRAFCDADWASCLDSRKSTTGFCIFLGESLVSWKAK 120
           +HLL+YLKG  GQG+FL S +SF +RAF D D ASCLDSRKSTTGFCIFLG+SLVSWKAK
Sbjct: 338 FHLLQYLKGSLGQGIFLKSSTSFHLRAFSDTDLASCLDSRKSTTGFCIFLGDSLVSWKAK 397

Query: 121 KQTTVSRSSADAEYHALAATTSKIIRLTY 150
           KQTTVSRSSA+AEY ALAATTS+I+ +T+
Sbjct: 398 KQTTVSRSSAEAEYQALAATTSEIVWITH 421

[Close]

BLAST of Moc08g10380 vs. ExPASy TrEMBL
Match: A0A6J1DP23 (uncharacterized protein LOC111022877 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111022877 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 3.5e-48
Identity = 98/146 (67.12%), Postives = 117/146 (80.14%), Query Frame = 0


Query: 1   MDPNIKLLASAGDILEDPTMYQCIIGCLIYLTISRSDITFVVHYLSQFVSQPRCPHLDAA 60
           MDPNIKL AS G +L+DP++Y+ +IG L+YLTISR DITF VH LSQF++ P   HL A 
Sbjct: 157 MDPNIKLSASDGKLLDDPSVYRRLIGRLLYLTISRPDITFTVHKLSQFMAAPHTTHLAAV 216

Query: 61  YHLLRYLKGCSGQGLFLSSLSSFQIRAFCDADWASCLDSRKSTTGFCIFLGESLVSWKAK 120
           + L+RYLKGC GQ + L+   SFQ+RAF DADW SC DSRKSTTGFCIFLG+SLVSWKAK
Sbjct: 217 HSLIRYLKGCPGQEILLNPTKSFQLRAFADADWGSCFDSRKSTTGFCIFLGDSLVSWKAK 276

Query: 121 KQTTVSRSSADAEYHALAATTSKIIR 147
           KQ+T+ RSS +AEY ALAAT S+I R
Sbjct: 277 KQSTIFRSSTEAEYRALAATVSEITR 302

[Close]

BLAST of Moc08g10380 vs. ExPASy TrEMBL
Match: A0A6J1DQI6 (uncharacterized protein LOC111022877 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111022877 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 3.5e-48
Identity = 98/146 (67.12%), Postives = 117/146 (80.14%), Query Frame = 0


Query: 1   MDPNIKLLASAGDILEDPTMYQCIIGCLIYLTISRSDITFVVHYLSQFVSQPRCPHLDAA 60
           MDPNIKL AS G +L+DP++Y+ +IG L+YLTISR DITF VH LSQF++ P   HL A 
Sbjct: 157 MDPNIKLSASDGKLLDDPSVYRRLIGRLLYLTISRPDITFTVHKLSQFMAAPHTTHLAAV 216

Query: 61  YHLLRYLKGCSGQGLFLSSLSSFQIRAFCDADWASCLDSRKSTTGFCIFLGESLVSWKAK 120
           + L+RYLKGC GQ + L+   SFQ+RAF DADW SC DSRKSTTGFCIFLG+SLVSWKAK
Sbjct: 217 HSLIRYLKGCPGQEILLNPTKSFQLRAFADADWGSCFDSRKSTTGFCIFLGDSLVSWKAK 276

Query: 121 KQTTVSRSSADAEYHALAATTSKIIR 147
           KQ+T+ RSS +AEY ALAAT S+I R
Sbjct: 277 KQSTIFRSSTEAEYRALAATVSEITR 302

[Close]

BLAST of Moc08g10380 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-34
Identity = 73/151 (48.34%), Postives = 100/151 (66.23%), Query Frame = 0


Query: 1   MDPNIKLLASAGDILEDPTMYQCIIGCLIYLTISRSDITFVVHYLSQFVSQPRCPHLDAA 60
           MDP++   A +G    D   Y+ +IG L+YL I+R DI+F V+ LSQF   PR  H  A 
Sbjct: 358 MDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAV 417

Query: 61  YHLLRYLKGCSGQGLFLSSLSSFQIRAFCDADWASCLDSRKSTTGFCIFLGESLVSWKAK 120
             +L Y+KG  GQGLF SS +  Q++ F DA + SC D+R+ST G+C+FLG SL+SWK+K
Sbjct: 418 MKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSK 477

Query: 121 KQTTVSRSSADAEYHALAATTSKIIRLTYCF 152
           KQ  VS+SSA+AEY AL+  T +++ L   F
Sbjct: 478 KQQVVSKSSAEAEYRALSFATDEMMWLAQFF 508

[Close]

BLAST of Moc08g10380 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-29
Identity = 58/128 (45.31%), Postives = 87/128 (67.97%), Query Frame = 0


Query: 17  DPTMYQCIIGCLIYLTISRSDITFVVHYLSQFVSQPRCPHLDAAYHLLRYLKGCSGQGLF 76
           DP+ ++ I+G L YLT++R DI++ V+ + Q + +P     D    +LRY+KG    GL+
Sbjct: 96  DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLY 155

Query: 77  LSSLSSFQIRAFCDADWASCLDSRKSTTGFCIFLGESLVSWKAKKQTTVSRSSADAEYHA 136
           +   S   ++AFCD+DWA C  +R+STTGFC FLG +++SW AK+Q TVSRSS + EY A
Sbjct: 156 IHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRA 215

Query: 137 LAATTSKI 145
           LA T +++
Sbjct: 216 LALTAAEL 223

[Close]

BLAST of Moc08g10380 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 95.5 bits (236), Expect = 5.2e-20
Identity = 44/79 (55.70%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 29  IYLTISRSDITFVVHYLSQFVSQPRCPHLDAAYHLLRYLKGCSGQGLFLSSLSSFQIRAF 88
           +YLTI+R D+TF V+ LSQF S  R   + A Y +L Y+KG  GQGLF S+ S  Q++AF
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 89  CDADWASCLDSRKSTTGFC 108
            D+DWASC D+R+S TGFC
Sbjct: 61  ADSDWASCPDTRRSVTGFC 79

The following BLAST results are available for this feature:

BLAST of Moc08g10380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153428.1	1.6e-79	100.00	uncharacterized protein LOC111020937 [Momordica charantia]	[more]
PON99369.1	5.0e-49	68.03	hypothetical protein TorRG33x02_049120 [Trema orientale]	[more]
XP_022132680.1	1.5e-48	69.80	uncharacterized protein LOC111005480 [Momordica charantia]	[more]
XP_022899321.1	1.9e-48	66.22	uncharacterized protein LOC111412620 [Olea europaea var. sylvestris]	[more]
XP_022155863.1	7.3e-48	67.12	uncharacterized protein LOC111022877 isoform X4 [Momordica charantia]	[more]

BLAST of Moc08g10380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92519	2.3e-28	45.31	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q94HW2	8.1e-26	41.82	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	2.0e-24	41.01	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P93290	7.4e-19	55.70	Uncharacterized mitochondrial protein AtMg00240 OS=Arabidopsis thaliana OX=3702 ...	[more]
P0CV72	6.9e-17	37.98	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]

BLAST of Moc08g10380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DHF4	7.8e-80	100.00	uncharacterized protein LOC111020937 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A2P5FNK4	2.4e-49	68.03	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_049120 PE=4 SV...	[more]
A0A6J1BT54	7.1e-49	69.80	uncharacterized protein LOC111005480 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1DP23	3.5e-48	67.12	uncharacterized protein LOC111022877 isoform X4 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DQI6	3.5e-48	67.12	uncharacterized protein LOC111022877 isoform X3 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Moc08g10380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.3e-34	48.34	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.6e-29	45.31	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	5.2e-20	55.70	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 12..138
None	No IPR available	PANTHER	PTHR11439:SF335	SUBFAMILY NOT NAMED	coord: 12..138
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 86..149 e-value: 2.85855E-30 score: 106.784

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g10380.1	Moc08g10380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0030247	polysaccharide binding