Moc07g26930 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc07g26930
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr7: 20094805 .. 20095047 (+)
RNA-Seq ExpressionMoc07g26930
SyntenyMoc07g26930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCTCGTGCTGACCTGGCGAAGATCGGAAGGGAAGGGTTCGAACTGATCGACGAATACTTCGGGCGACCGGCGGCGAGGAGGGCGGCGGCGAGGCCGGCCATTCCTCAGCCGCCGCGTCCGGCGGAGCAACCCCCGAGGAAGAAGAAAGAACCGGCGCCGGTTAACTGCAATCAGGTGGCGAAATCCCGCGGCGGGATCGTCATAACAACTTGGCGTGCTTATTCAAAATCCAAATGA

mRNA sequence

ATGGCTGCTCGTGCTGACCTGGCGAAGATCGGAAGGGAAGGGTTCGAACTGATCGACGAATACTTCGGGCGACCGGCGGCGAGGAGGGCGGCGGCGAGGCCGGCCATTCCTCAGCCGCCGCGTCCGGCGGAGCAACCCCCGAGGAAGAAGAAAGAACCGGCGCCGGTTAACTGCAATCAGGTGGCGAAATCCCGCGGCGGGATCGTCATAACAACTTGGCGTGCTTATTCAAAATCCAAATGA

Coding sequence (CDS)

ATGGCTGCTCGTGCTGACCTGGCGAAGATCGGAAGGGAAGGGTTCGAACTGATCGACGAATACTTCGGGCGACCGGCGGCGAGGAGGGCGGCGGCGAGGCCGGCCATTCCTCAGCCGCCGCGTCCGGCGGAGCAACCCCCGAGGAAGAAGAAAGAACCGGCGCCGGTTAACTGCAATCAGGTGGCGAAATCCCGCGGCGGGATCGTCATAACAACTTGGCGTGCTTATTCAAAATCCAAATGA

Protein sequence

MAARADLAKIGREGFELIDEYFGRPAARRAAARPAIPQPPRPAEQPPRKKKEPAPVNCNQVAKSRGGIVITTWRAYSKSK
Homology
BLAST of Moc07g26930 vs. NCBI nr
Match: KAG6575082.1 (hypothetical protein SDJN03_25721, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 112.5 bits (280), Expect = 1.7e-21
Identity = 62/79 (78.48%), Postives = 67/79 (84.81%), Query Frame = 0

Query: 1  MAARADLAKIGREGFELIDEYFGR-PAARR-AAARPAIPQPPRPAEQPPRKKKE--PAPV 60
          MA RADLAKIGREGFELIDEYFGR PA RR A ARPA+PQ P  AEQPPRK +E  P PV
Sbjct: 1  MAPRADLAKIGREGFELIDEYFGRVPATRRPAVARPALPQAPCKAEQPPRKMREKLPVPV 60

Query: 61 NCNQVAKSRGGIVITTWRA 76
          NCNQVA++RGG+VITTWRA
Sbjct: 61 NCNQVARARGGVVITTWRA 79

BLAST of Moc07g26930 vs. NCBI nr
Match: KAG6575081.1 (hypothetical protein SDJN03_25720, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 110.9 bits (276), Expect = 5.1e-21
Identity = 63/82 (76.83%), Postives = 67/82 (81.71%), Query Frame = 0

Query: 1  MAARADLAKIGREGFELIDEYFGR-PAARR----AAARPAIPQPPRPAEQPPRKKKE--P 60
          MA R DLAKIGREGF+LIDEYFGR PA RR    AAARPA+PQ P  AEQPPRKK+E  P
Sbjct: 1  MARRGDLAKIGREGFDLIDEYFGRAPATRRAAAVAAARPALPQAPCKAEQPPRKKREKMP 60

Query: 61 APVNCNQVAKSRGGIVITTWRA 76
            VNCNQVAK+RGGIVITTWRA
Sbjct: 61 VAVNCNQVAKARGGIVITTWRA 82

BLAST of Moc07g26930 vs. NCBI nr
Match: KGN47422.1 (hypothetical protein Csa_021740 [Cucumis sativus])

HSP 1 Score: 94.0 bits (232), Expect = 6.4e-16
Identity = 55/84 (65.48%), Postives = 63/84 (75.00%), Query Frame = 0

Query: 3  ARADLAKIGREGFELIDEYFGRPA---ARRAA---ARPAIPQPPRPAEQPP--RKKKEPA 62
          +R DLAKIGREGF++IDEYFGR +   ARR A   ARPA+PQPPR AEQPP  RK+K  A
Sbjct: 12 SRGDLAKIGREGFQIIDEYFGRASSTGARRVAAKTARPALPQPPRKAEQPPRIRKEKPVA 71

Query: 63 PVNCNQVAKSRGGIVITTWRAYSK 79
           V  +QVAK  GG VITTWR Y+K
Sbjct: 72 AVTSDQVAKHGGGTVITTWRPYAK 95

BLAST of Moc07g26930 vs. NCBI nr
Match: XP_023548315.1 (multiple organellar RNA editing factor 3, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 85.9 bits (211), Expect = 1.7e-13
Identity = 51/67 (76.12%), Postives = 53/67 (79.10%), Query Frame = 0

Query: 1  MAARADLAKIGREGFELIDEYFGR-PAARRAAA----RPAIPQPPRPAEQPPRKKKE--P 60
          MA RADLAKIGREGFELIDEYFGR PA RRAAA    RPA+PQ P  AEQPPRK +E  P
Sbjct: 1  MAPRADLAKIGREGFELIDEYFGRVPATRRAAAAAAGRPALPQAPCKAEQPPRKMREKLP 60

BLAST of Moc07g26930 vs. NCBI nr
Match: KGN47421.1 (hypothetical protein Csa_021737 [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 4.0e-10
Identity = 49/86 (56.98%), Postives = 60/86 (69.77%), Query Frame = 0

Query: 5  ADLAKIGREGFELIDEYFGRPA---ARRAAA----RPAIPQPPRP-AEQPPRKKKEP--A 64
          A+LA+IG EGF+LID++FGR +    RR  A    RPA  QPPR  AEQPP K KE   A
Sbjct: 13 ANLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAEQPPSKTKEKQGA 72

Query: 65 PVNCNQVAKSRGGIVITTWRAYSKSK 81
           V  + +AK+RGGIVITTWR+Y+K K
Sbjct: 73 VVTSDHLAKTRGGIVITTWRSYAKRK 98

BLAST of Moc07g26930 vs. ExPASy TrEMBL
Match: A0A0A0KG95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318690 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.1e-16
Identity = 55/84 (65.48%), Postives = 63/84 (75.00%), Query Frame = 0

Query: 3  ARADLAKIGREGFELIDEYFGRPA---ARRAA---ARPAIPQPPRPAEQPP--RKKKEPA 62
          +R DLAKIGREGF++IDEYFGR +   ARR A   ARPA+PQPPR AEQPP  RK+K  A
Sbjct: 12 SRGDLAKIGREGFQIIDEYFGRASSTGARRVAAKTARPALPQPPRKAEQPPRIRKEKPVA 71

Query: 63 PVNCNQVAKSRGGIVITTWRAYSK 79
           V  +QVAK  GG VITTWR Y+K
Sbjct: 72 AVTSDQVAKHGGGTVITTWRPYAK 95

BLAST of Moc07g26930 vs. ExPASy TrEMBL
Match: A0A0A0KI19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318680 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.9e-10
Identity = 49/86 (56.98%), Postives = 60/86 (69.77%), Query Frame = 0

Query: 5  ADLAKIGREGFELIDEYFGRPA---ARRAAA----RPAIPQPPRP-AEQPPRKKKEP--A 64
          A+LA+IG EGF+LID++FGR +    RR  A    RPA  QPPR  AEQPP K KE   A
Sbjct: 13 ANLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAEQPPSKTKEKQGA 72

Query: 65 PVNCNQVAKSRGGIVITTWRAYSKSK 81
           V  + +AK+RGGIVITTWR+Y+K K
Sbjct: 73 VVTSDHLAKTRGGIVITTWRSYAKRK 98

BLAST of Moc07g26930 vs. ExPASy TrEMBL
Match: A0A5A7U5Q5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001240 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.9e-06
Identity = 32/71 (45.07%), Postives = 43/71 (60.56%), Query Frame = 0

Query: 3  ARADLAKIGREGFELIDEYFGRPAARRAAARPAIPQPPRPAEQPPRKKKEPAPVNCNQVA 62
          AR DLA+IG E F LI+E++ RP  R     PA PQP    + P R  +   P+ C+Q+A
Sbjct: 8  ARNDLARIGVEAFALIEEHYDRPRRRPRQVVPAPPQPVVAIQPPKRMVESSPPIRCDQLA 67

Query: 63 KSRGGIVITTW 74
          K+ GGI+I  W
Sbjct: 68 KAHGGIIIKEW 78

BLAST of Moc07g26930 vs. ExPASy TrEMBL
Match: A0A0A0L5A8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G164540 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.2e-05
Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 0

Query: 1  MAAR-ADLAKIGREGFELIDEYFGRPAARRAAARPAIPQPPRPAEQPPRKKKEPAP-VNC 60
          MAAR  DLA+IG EGF  I+E + RP  +     PA PQP   A  PP++K E +P + C
Sbjct: 1  MAARNNDLARIGLEGFIFIEELYDRPRRKPRHVAPAPPQPV-VAIHPPQRKVESSPSIRC 60

Query: 61 NQVAKSRGGIVITTW 74
          +Q+AK+ GGI+I  W
Sbjct: 61 DQLAKAHGGIIIKEW 74

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6575082.11.7e-2178.48hypothetical protein SDJN03_25721, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6575081.15.1e-2176.83hypothetical protein SDJN03_25720, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN47422.16.4e-1665.48hypothetical protein Csa_021740 [Cucumis sativus][more]
XP_023548315.11.7e-1376.12multiple organellar RNA editing factor 3, mitochondrial [Cucurbita pepo subsp. p... [more]
KGN47421.14.0e-1056.98hypothetical protein Csa_021737 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KG953.1e-1665.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318690 PE=4 SV=1[more]
A0A0A0KI191.9e-1056.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318680 PE=4 SV=1[more]
A0A5A7U5Q52.9e-0645.07Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0L5A83.2e-0548.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G164540 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..56

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc07g26930.1Moc07g26930.1mRNA