Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCAATTTAGAACTCAATGAGGATGTCCGTCCGATTAAAGTTGGGAGGAGAGATGTCCCAGCTTCTTGTATGAGCATTGAGGAAGAACCCGACGGTAACCCCTGGTTTCATGACATCAAGCAATATATAAAGAGTAAAGATTATCCACCAAATGCTTCAGAAAATGATAAGCGCACCCTTCGCAAGTTGGCAATGAAGTTTTTCTTAAACGGAGAGATACTGTACAAGAGAAACCATGACATGGTTCTCTTAAGGTGCGTCGAAGGAAGATATGCCAATAGGATTATGGAAGAAGTTCATGAAGGAGTGTGTGACACTCATGCAAATGGACACATGATGGCTAGACAAATTTTAAGAGCTGGCTATTACTGGCTAACTATAGAGACAGATTGTATTAAATATGCAAGAAAATGTCATAAATGTCAAATTTACTCGGACAAGACTCATGCTCCTGCTTCTCATTTGCATACTTTGACAGCTCCTTGGCCTTTCTCTATGTGGGGCATGGATGTGATAGGACCTATCGAACCTAAAGCATCAAATGGGCACCGATTCATTTTGGTAGCCATAGATTATTTTACTAAATGGGTAGAAGCAGCTTCTTACCGAGATGTGACAAAAGGAGTTGTAGTCAAATTTTTCAAGAAGGAAATTATTTGTCGTTATGGTCTTTCTGAAACCATAATTTCCGATAATGCAAGGAATTTGAACAACAAATTGATGAGTGAGCTCTGTGAGCAGTTTAAGATCAAACATCTCAACTCAACCCCTTATCGACCTAAGATGAATGGTGCAGTAGAAGCCGCCAATAAAAACATAAAAAGAATAGTTGAAAAGATGACTGTAACTTACAGAGACTGGCATGAAATGCTTCCATTTGCCTTACATGGTTACCGCACCTCAGTCCGTACTTCAACTGGGGCAACGCCATTTTCTTTAGTTTATGGTATGGAAGCTGTTCTCCCTATTGAAGTAGAAATTTCATCATTGAGAGTTATCATGGAAGCTAAGTTACAAGAGGCTGAGTGGGTCCAAAGACGTTATGAGCAGCTAAACTTTGTAGAAGAAAAGAGGTTGACGGCATTATGCAGAGGACAACTTTATCAAAGAAGAATGATGAAAGCCTATGACAAGAAGGTGCACCCAAGAAGGTTTAGAGAGGGAGATTTAGTTCTAAAAAGAATTCTCCCATTACAGAAAGATCATCGAGGCAAATGGACCCCAAATTATGAAGGACCATTTGTGGTGAAAAAGGCTTTCTCCGGAGGAGCACTAGTTCTGGCCAACATGGATGGCACTGAATTTTTAAATCCAGTCAACTCAGATCATGTTCGAAAATATTATGCATAG
mRNA sequence
ATGTTCAATTTAGAACTCAATGAGGATGTCCGTCCGATTAAAGTTGGGAGGAGAGATGTCCCAGCTTCTTGTATGAGCATTGAGGAAGAACCCGACGGTAACCCCTGGTTTCATGACATCAAGCAATATATAAAGAGTAAAGATTATCCACCAAATGCTTCAGAAAATGATAAGCGCACCCTTCGCAAGTTGGCAATGAAGTTTTTCTTAAACGGAGAGATACTGTACAAGAGAAACCATGACATGGTTCTCTTAAGAGTTATCATGGAAGCTAAGTTACAAGAGGCTGAGTGGGTCCAAAGACGTTATGAGCAGCTAAACTTTGTAGAAGAAAAGAGGTTGACGGCATTATGCAGAGGACAACTTTATCAAAGAAGAATGATGAAAGCCTATGACAAGAAGGTGCACCCAAGAAGGTTTAGAGAGGGAGATTTAGTTCTAAAAAGAATTCTCCCATTACAGAAAGATCATCGAGGCAAATGGACCCCAAATTATGAAGGACCATTTGTGGTGAAAAAGGCTTTCTCCGGAGGAGCACTAGTTCTGGCCAACATGGATGGCACTGAATTTTTAAATCCAGTCAACTCAGATCATGTTCGAAAATATTATGCATAG
Coding sequence (CDS)
ATGTTCAATTTAGAACTCAATGAGGATGTCCGTCCGATTAAAGTTGGGAGGAGAGATGTCCCAGCTTCTTGTATGAGCATTGAGGAAGAACCCGACGGTAACCCCTGGTTTCATGACATCAAGCAATATATAAAGAGTAAAGATTATCCACCAAATGCTTCAGAAAATGATAAGCGCACCCTTCGCAAGTTGGCAATGAAGTTTTTCTTAAACGGAGAGATACTGTACAAGAGAAACCATGACATGGTTCTCTTAAGAGTTATCATGGAAGCTAAGTTACAAGAGGCTGAGTGGGTCCAAAGACGTTATGAGCAGCTAAACTTTGTAGAAGAAAAGAGGTTGACGGCATTATGCAGAGGACAACTTTATCAAAGAAGAATGATGAAAGCCTATGACAAGAAGGTGCACCCAAGAAGGTTTAGAGAGGGAGATTTAGTTCTAAAAAGAATTCTCCCATTACAGAAAGATCATCGAGGCAAATGGACCCCAAATTATGAAGGACCATTTGTGGTGAAAAAGGCTTTCTCCGGAGGAGCACTAGTTCTGGCCAACATGGATGGCACTGAATTTTTAAATCCAGTCAACTCAGATCATGTTCGAAAATATTATGCATAG
Protein sequence
MFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIKSKDYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRVIMEAKLQEAEWVQRRYEQLNFVEEKRLTALCRGQLYQRRMMKAYDKKVHPRRFREGDLVLKRILPLQKDHRGKWTPNYEGPFVVKKAFSGGALVLANMDGTEFLNPVNSDHVRKYYA
Homology
BLAST of Moc07g23070 vs. NCBI nr
Match:
XP_022157796.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia])
HSP 1 Score: 313.5 bits (802), Expect = 1.3e-81
Identity = 199/450 (44.22%), Postives = 201/450 (44.67%), Query Frame = 0
Query: 1 MFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIKSKDYPPNASENDKRT 60
MFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIKSK+Y PNASENDKRT
Sbjct: 1253 MFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIKSKEYQPNASENDKRT 1312
Query: 61 LRKLAMKFFLNGEILYKRNHDMVL------------------------------------ 120
LRKLAMKFFLNGEILYKRNHDMVL
Sbjct: 1313 LRKLAMKFFLNGEILYKRNHDMVLLRCVEGRDANRIMEEVHEGVCGTHANGHMMARQILR 1372
Query: 121 ------------------------------------------------------------ 180
Sbjct: 1373 AGYYWLTIETDCIKYARKCHKCQIYSDKTHAPTSHLHTLTAPWPFSMWGMDVIGPIEPKA 1432
Query: 181 ------------------------------------------------------------ 205
Sbjct: 1433 SSGHRFILVAIDYFTKWVEAASYRDVTKGVVVKFIKKKIICRYGLPETIISDNARNLNNK 1492
BLAST of Moc07g23070 vs. NCBI nr
Match:
XP_022158986.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia])
HSP 1 Score: 309.7 bits (792), Expect = 1.9e-80
Identity = 198/450 (44.00%), Postives = 200/450 (44.44%), Query Frame = 0
Query: 1 MFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIKSKDYPPNASENDKRT 60
MFNLELNEDV PIKVGRRDVPASCMSIEEEPDGNPWFH+IK YIKSK+YPPNASENDKRT
Sbjct: 1424 MFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIKXYIKSKEYPPNASENDKRT 1483
Query: 61 LRKLAMKFFLNGEILYKRNHDMVL------------------------------------ 120
LRKLAMKFFLNGEILYKRNHDMVL
Sbjct: 1484 LRKLAMKFFLNGEILYKRNHDMVLLRCVEGRDANRIMEEVHEGVCGTHANGHMMARQILR 1543
Query: 121 ------------------------------------------------------------ 180
Sbjct: 1544 AGYYWLTIXTDCIKYARKCHKCQIYSDKTHAPASHLHTLTAPWPFSMWGMDLIGPIEPKA 1603
Query: 181 ------------------------------------------------------------ 205
Sbjct: 1604 SNGHRFILVAIDYFTKWVEAASDRDVTKGVVVKFIKNEIICRYGLPQTIISDNARNLNNK 1663
BLAST of Moc07g23070 vs. NCBI nr
Match:
XP_022150030.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111018303 [Momordica charantia])
HSP 1 Score: 307.4 bits (786), Expect = 9.4e-80
Identity = 197/450 (43.78%), Postives = 200/450 (44.44%), Query Frame = 0
Query: 1 MFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIKSKDYPPNASENDKRT 60
MFNLELNEDVRPIKVGRRDV ASCMSIEEEPDGNPWFHDIKQYIKSK+YPPNASENDKRT
Sbjct: 1219 MFNLELNEDVRPIKVGRRDVSASCMSIEEEPDGNPWFHDIKQYIKSKEYPPNASENDKRT 1278
Query: 61 LRKLAMKFFLNGEILYKRNHDMVL------------------------------------ 120
LRKLAMKFFLN EILYKRNHDMVL
Sbjct: 1279 LRKLAMKFFLNREILYKRNHDMVLLRCVEXRDANRIMEEVHEEVCGTHANGHMIARQILR 1338
Query: 121 ------------------------------------------------------------ 180
Sbjct: 1339 AGYYWLTIETDCIKYARKCHKCQIYSDKTHAPASHLHTLTAPWPFSMWGMDVIGPIEPKA 1398
Query: 181 ------------------------------------------------------------ 205
Sbjct: 1399 SNGHRFILVAIDYFTKWVEAASYRDVTKGVVVKFIKKEIICRYGLPETIISDNARNLNNK 1458
BLAST of Moc07g23070 vs. NCBI nr
Match:
XP_022147189.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia])
HSP 1 Score: 305.8 bits (782), Expect = 2.7e-79
Identity = 195/450 (43.33%), Postives = 199/450 (44.22%), Query Frame = 0
Query: 1 MFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIKSKDYPPNASENDKRT 60
MFNLELNEDVRPIKVGRRDVPASCMSIEEEPDG PWFHDIKQYIKSK+YPPNASENDKRT
Sbjct: 1815 MFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGKPWFHDIKQYIKSKEYPPNASENDKRT 1874
Query: 61 LRKLAMKFFLNGEILYKRNHDMVL------------------------------------ 120
LRKLA+KFFLNGEILYKRNHDMVL
Sbjct: 1875 LRKLAIKFFLNGEILYKRNHDMVLLRCVEGRDANRIMEEIHEGVCGTHANGHMMARQILR 1934
Query: 121 ------------------------------------------------------------ 180
Sbjct: 1935 AGYYWLTIETDCIKYARKCHKCQIYSDKTHAPASHLHALTAPWPFSMWGMDVIGPIEPKA 1994
Query: 181 ------------------------------------------------------------ 205
Sbjct: 1995 SNGHQFILVAIDYFTKWVEAASYRDVTKGVVVKFIKKEIICRYGLPKTIISDNARNLNNK 2054
BLAST of Moc07g23070 vs. NCBI nr
Match:
XP_022143495.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia])
HSP 1 Score: 305.1 bits (780), Expect = 4.7e-79
Identity = 194/450 (43.11%), Postives = 198/450 (44.00%), Query Frame = 0
Query: 1 MFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIKSKDYPPNASENDKRT 60
MFNLELNEDV PIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYI SK+YPPNASENDKRT
Sbjct: 1705 MFNLELNEDVCPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYINSKEYPPNASENDKRT 1764
Query: 61 LRKLAMKFFLNGEILYKRNHDMVL------------------------------------ 120
RKLAMKFFLNGEILYKRNHDMVL
Sbjct: 1765 FRKLAMKFFLNGEILYKRNHDMVLLRCVEGRDANRIMEEVHEGVCDTHANGHMIARQILR 1824
Query: 121 ------------------------------------------------------------ 180
Sbjct: 1825 AGYYWLTIXTDCIKYARKCHKCQIYADKTHAPASHLHTLTAPWPFSMWGMDVIGPIEPKA 1884
Query: 181 ------------------------------------------------------------ 205
Sbjct: 1885 SNGHRFILVAIDYFTNWVEAASYRDVTKGVVVKFIKKEIICRYGLPETIISDNARNLNNK 1944
BLAST of Moc07g23070 vs. ExPASy TrEMBL
Match:
A0A6J1DZ90 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1)
HSP 1 Score: 313.5 bits (802), Expect = 6.3e-82
Identity = 199/450 (44.22%), Postives = 201/450 (44.67%), Query Frame = 0
Query: 1 MFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIKSKDYPPNASENDKRT 60
MFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIKSK+Y PNASENDKRT
Sbjct: 1253 MFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIKSKEYQPNASENDKRT 1312
Query: 61 LRKLAMKFFLNGEILYKRNHDMVL------------------------------------ 120
LRKLAMKFFLNGEILYKRNHDMVL
Sbjct: 1313 LRKLAMKFFLNGEILYKRNHDMVLLRCVEGRDANRIMEEVHEGVCGTHANGHMMARQILR 1372
Query: 121 ------------------------------------------------------------ 180
Sbjct: 1373 AGYYWLTIETDCIKYARKCHKCQIYSDKTHAPTSHLHTLTAPWPFSMWGMDVIGPIEPKA 1432
Query: 181 ------------------------------------------------------------ 205
Sbjct: 1433 SSGHRFILVAIDYFTKWVEAASYRDVTKGVVVKFIKKKIICRYGLPETIISDNARNLNNK 1492
BLAST of Moc07g23070 vs. ExPASy TrEMBL
Match:
A0A6J1E2J7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1)
HSP 1 Score: 309.7 bits (792), Expect = 9.1e-81
Identity = 198/450 (44.00%), Postives = 200/450 (44.44%), Query Frame = 0
Query: 1 MFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIKSKDYPPNASENDKRT 60
MFNLELNEDV PIKVGRRDVPASCMSIEEEPDGNPWFH+IK YIKSK+YPPNASENDKRT
Sbjct: 1424 MFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIKXYIKSKEYPPNASENDKRT 1483
Query: 61 LRKLAMKFFLNGEILYKRNHDMVL------------------------------------ 120
LRKLAMKFFLNGEILYKRNHDMVL
Sbjct: 1484 LRKLAMKFFLNGEILYKRNHDMVLLRCVEGRDANRIMEEVHEGVCGTHANGHMMARQILR 1543
Query: 121 ------------------------------------------------------------ 180
Sbjct: 1544 AGYYWLTIXTDCIKYARKCHKCQIYSDKTHAPASHLHTLTAPWPFSMWGMDLIGPIEPKA 1603
Query: 181 ------------------------------------------------------------ 205
Sbjct: 1604 SNGHRFILVAIDYFTKWVEAASDRDVTKGVVVKFIKNEIICRYGLPQTIISDNARNLNNK 1663
BLAST of Moc07g23070 vs. ExPASy TrEMBL
Match:
A0A6J1D7C7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111018303 PE=4 SV=1)
HSP 1 Score: 307.4 bits (786), Expect = 4.5e-80
Identity = 197/450 (43.78%), Postives = 200/450 (44.44%), Query Frame = 0
Query: 1 MFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIKSKDYPPNASENDKRT 60
MFNLELNEDVRPIKVGRRDV ASCMSIEEEPDGNPWFHDIKQYIKSK+YPPNASENDKRT
Sbjct: 1219 MFNLELNEDVRPIKVGRRDVSASCMSIEEEPDGNPWFHDIKQYIKSKEYPPNASENDKRT 1278
Query: 61 LRKLAMKFFLNGEILYKRNHDMVL------------------------------------ 120
LRKLAMKFFLN EILYKRNHDMVL
Sbjct: 1279 LRKLAMKFFLNREILYKRNHDMVLLRCVEXRDANRIMEEVHEEVCGTHANGHMIARQILR 1338
Query: 121 ------------------------------------------------------------ 180
Sbjct: 1339 AGYYWLTIETDCIKYARKCHKCQIYSDKTHAPASHLHTLTAPWPFSMWGMDVIGPIEPKA 1398
Query: 181 ------------------------------------------------------------ 205
Sbjct: 1399 SNGHRFILVAIDYFTKWVEAASYRDVTKGVVVKFIKKEIICRYGLPETIISDNARNLNNK 1458
BLAST of Moc07g23070 vs. ExPASy TrEMBL
Match:
A0A6J1D099 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1)
HSP 1 Score: 305.8 bits (782), Expect = 1.3e-79
Identity = 195/450 (43.33%), Postives = 199/450 (44.22%), Query Frame = 0
Query: 1 MFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIKSKDYPPNASENDKRT 60
MFNLELNEDVRPIKVGRRDVPASCMSIEEEPDG PWFHDIKQYIKSK+YPPNASENDKRT
Sbjct: 1815 MFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGKPWFHDIKQYIKSKEYPPNASENDKRT 1874
Query: 61 LRKLAMKFFLNGEILYKRNHDMVL------------------------------------ 120
LRKLA+KFFLNGEILYKRNHDMVL
Sbjct: 1875 LRKLAIKFFLNGEILYKRNHDMVLLRCVEGRDANRIMEEIHEGVCGTHANGHMMARQILR 1934
Query: 121 ------------------------------------------------------------ 180
Sbjct: 1935 AGYYWLTIETDCIKYARKCHKCQIYSDKTHAPASHLHALTAPWPFSMWGMDVIGPIEPKA 1994
Query: 181 ------------------------------------------------------------ 205
Sbjct: 1995 SNGHQFILVAIDYFTKWVEAASYRDVTKGVVVKFIKKEIICRYGLPKTIISDNARNLNNK 2054
BLAST of Moc07g23070 vs. ExPASy TrEMBL
Match:
A0A6J1CNY7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1)
HSP 1 Score: 305.1 bits (780), Expect = 2.3e-79
Identity = 194/450 (43.11%), Postives = 198/450 (44.00%), Query Frame = 0
Query: 1 MFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIKSKDYPPNASENDKRT 60
MFNLELNEDV PIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYI SK+YPPNASENDKRT
Sbjct: 1705 MFNLELNEDVCPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYINSKEYPPNASENDKRT 1764
Query: 61 LRKLAMKFFLNGEILYKRNHDMVL------------------------------------ 120
RKLAMKFFLNGEILYKRNHDMVL
Sbjct: 1765 FRKLAMKFFLNGEILYKRNHDMVLLRCVEGRDANRIMEEVHEGVCDTHANGHMIARQILR 1824
Query: 121 ------------------------------------------------------------ 180
Sbjct: 1825 AGYYWLTIXTDCIKYARKCHKCQIYADKTHAPASHLHTLTAPWPFSMWGMDVIGPIEPKA 1884
Query: 181 ------------------------------------------------------------ 205
Sbjct: 1885 SNGHRFILVAIDYFTNWVEAASYRDVTKGVVVKFIKKEIICRYGLPETIISDNARNLNNK 1944
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022157796.1 | 1.3e-81 | 44.22 | LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia] | [more] |
XP_022158986.1 | 1.9e-80 | 44.00 | LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia] | [more] |
XP_022150030.1 | 9.4e-80 | 43.78 | LOW QUALITY PROTEIN: uncharacterized protein LOC111018303 [Momordica charantia] | [more] |
XP_022147189.1 | 2.7e-79 | 43.33 | LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia] | [more] |
XP_022143495.1 | 4.7e-79 | 43.11 | LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DZ90 | 6.3e-82 | 44.22 | Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1 | [more] |
A0A6J1E2J7 | 9.1e-81 | 44.00 | Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1 | [more] |
A0A6J1D7C7 | 4.5e-80 | 43.78 | Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111018303 PE=4 SV=1 | [more] |
A0A6J1D099 | 1.3e-79 | 43.33 | Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1 | [more] |
A0A6J1CNY7 | 2.3e-79 | 43.11 | Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |