Moc07g22500 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc07g22500
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Phosphorylated adapter RNA export protein
Location	chr7: 16541771 .. 16544780 (+)
RNA-Seq Expression	Moc07g22500
Synteny	Moc07g22500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGACAAGAGAACGTACTCGATGCCATATATGAAGATGATGACTTGGAAAATGACGATGTTGAAATGGCTGATGTGGAAGAAGGAGAGTTCGTCGACGGCAACGTACCACATGATACAGAGACAAGCAGTCTTACAGATGTCCATGCACCAAGTATAGATCATAAAAGTAAAAACCGTAGACGTCGGGCAAAGAAAAAGAAGAACAAAAGAAAGACTAGCGAGTCAGGTTCAAATGGCACAGATATTAACAGGTTAACTGGAATTTCCTAATCTTGCAAGCACACGTTCCTTACTTAATTACCCATATTATTTTTGTGAATCACATAAAATGGATATACTTTAATGGATTTACAAGTAGCAATTAGTTAGGAACTTGTATTCTGGTTGTAATATTATTCTGATTTCTGTTTCTCTCAGGTTTGTGTTAGATACATGCCGGCGTTTGAAGGAGAAAAAATCATACATGGTGTACACTGCTGTAGGTTGTCTGGGAGTCTCTGCATTAAGCGAACTTATCAACGAGGTATTTTGATTTTACTAGAACGTGATAAGAATATCTTTTTGCTTATCGATTAACATCAGTTGTCCAATTGCCCCAAGACGACTTGTTAGTAAGGCCTAAGGGCATGTAGTCTCCGTGTAACACCTACCCAGAGGTTGCATGTTCGAACCTTTGGATGAGCTTAATAAAAAAAAATTCTTGATATCTCTCGGGTCAAAGTCTTGGGACGGGCGTGGATGCCCTATCATGGGAAAGCAAAGCTCCAACTTTGGGTTATAAAAAAAACATTAGTTATATAATTTCCTTTCTGTTTTAATTTTGTCCTACTTTATAGTTCTTTCCCCCTATTCATCAAACCAACCTATATGAGTTTTATCAGTCCTTTTCTTTTTGGGTTTTCATTCCTGCCCTAAGTGAGCACAACTCATGAATTACTTTACTTCTGTGCCATATGCCTTTGTTCAGTTATTATTTCTATCCTCAATACTTTTCCTGAGGTCACGAATGATTCTGCCCTCTTCCTGCTAAAAGGTGAAAATTTTCGGTTGAACTTAATTTTTGACTGGCCTGCCTAACCATGGCCATCCACTCCAGCAAGTATCATACCACACAGTCACTCTTCATATTTAATCAGTATTATTTACTACCCTTGCAGATTCTGTTGCTGAAGCCATTTTGCTACTTTTAACCTTGTTCTCTGAGCTGTGAACCACCATGGCTGGACCACTTCGTCTGTGCTATATAAGATGATGTTATTATCCCAGCATATATATGTTGGTTACGATCTCTGTAAGATTTGTCCTTTACTAAACTTAAGCATTGGTCACTCTTTGGCATCCAATTCCAAAAAATGTGTATTCCACCCGATTATTCTTGTTGACTCCATTGAAATGCAATGAAAGTGAGAAGTTTGAATATATATTTTTAACTGTCATATTCTTGGTGTCTAGTACTTGGTCTCATTTGTTGGTCCCAGGGTTTGAAATTTATTGGTTTAGTACTTAGTCTATTCTGAAGGCCCCGCCAGCCCTTTTGAGTTACTAATGACGCTTCCCTAGAGATAGGAAGAATACTTATAAACCAATGGTTGATGTTGCTTGAACTGATATTAGCACTTCTCTTATTTTACTACACAACACCCGTATGATCTGTGTGTGTGTATACAAGTTGACATTTCGGAACTCCAGGTCAATGCAGTTCAGGCTTGTGGAGGTCAGATGACTGCAGATGGCCGGCGCTTTCGAACAGGAGGTGGTATATTATGGAGCATCATCAAAACCCGGGAACCAAATGCCTATAAAGAGATTATGAAACGAGCGAAGGAATTTGAGGTGTGTAACTAAACTTGTTTGACGTAGTTTTTCACTCGGAAGACTAATAGGCGACTTATTCTTTTATTTGTGTCATATGAATGTGCTACTCCTATCCTGGTCGCATAGGAAAATGTTATCAATATTCTTGGAAGATGCTTATTTATTTATTTTATTATCAAGAAATTTACCTTTCATCAAGAAGAATTGTAATCTACAAAAGGATCAATTTAGGCCAACACCACGGTCTAAAAGGCTGAGAGTTCAGAAAAGGAGCCACTCCAGGCCTTGACCTTACAAAACAAGAAAAATCTCCAATCCAAAAAAATAAGGCCTTGCCAATAATTAAAAAAATCGGCAGAGATACAGCCATTAAACCTAACTGAGGATGAGAACTCTCAACTCCTAAAGATTCTAATATTTATCTCAATGTAGATACTTAATTAAAAAAAAAAAAGAAAAAAAAAGCTCAAAATCCTCCGGTAACAATCCTTGTTACAAGTTACACAAACTCCAAAGGGTCTCCAAAAAAACCATCCCCAATCAAACGAGCGAACTGATAACTCCAAATGATGTGACCTAAATCCAGAGATGTCTTCCTACAAAGAATGAACTAATGCGGCCTCTACAAGAGGAAAGAATGCCTCTAAATCCACAATTTTTAAATTGTTTTGTTTCATAGTCAACTCAAGGCAAAATTTTCATCTTTCCGAATCTTTCATCTTATTCTGAGTGGCCTCAGTTTGCCAGGGAGCTTCTATCTGACAGTTCTCAAATGGCTTATATTATGTTTTCTTCTCTCTTGGATTTTATTGTGTTTTGAAGAGTTATACTTTTAATTGTGTTTTTGAAGTCTTTATTAGTTATTACAAATTTGGTAGTATGACAATCACAGTCACACGTTTTTTGGTTCATAATGATGGGGCAGAAACAATTTAAGCAACCAAATCTCAGGGGGGAAGCAACAGGAACTGAGAAAGAGAACTCTGAAAAGGTTCTTCCCCACATCTTCTCTGATGGATCTTCACGAGATCAACCGGGTATCGCCCAGAGCTTTACTCCAGAGCAAAATCAATCTAAACAACCAAATTCTGAAGAAAATCGATTGTCTGTTCACGATAGAATAAGAGTACCAGTGTCATATGATGACGACCTCCTTGGAGAGAATCTGAACGAAGAAGACATGACTTGA

mRNA sequence

ATGGATGGACAAGAGAACGTACTCGATGCCATATATGAAGATGATGACTTGGAAAATGACGATGTTGAAATGGCTGATGTGGAAGAAGGAGAGTTCGTCGACGGCAACGTACCACATGATACAGAGACAAGCAGTCTTACAGATGTCCATGCACCAAGTATAGATCATAAAAGTAAAAACCGTAGACGTCGGGCAAAGAAAAAGAAGAACAAAAGAAAGACTAGCGAGTCAGGTTCAAATGGCACAGATATTAACAGGTTTGTGTTAGATACATGCCGGCGTTTGAAGGAGAAAAAATCATACATGGTGTACACTGCTGTAGGTTGTCTGGGAGTCTCTGCATTAAGCGAACTTATCAACGAGGTCAATGCAGTTCAGGCTTGTGGAGGTCAGATGACTGCAGATGGCCGGCGCTTTCGAACAGGAGGTGGTATATTATGGAGCATCATCAAAACCCGGGAACCAAATGCCTATAAAGAGATTATGAAACGAGCGAAGGAATTTGAGAAACAATTTAAGCAACCAAATCTCAGGGGGGAAGCAACAGGAACTGAGAAAGAGAACTCTGAAAAGGTTCTTCCCCACATCTTCTCTGATGGATCTTCACGAGATCAACCGGGTATCGCCCAGAGCTTTACTCCAGAGCAAAATCAATCTAAACAACCAAATTCTGAAGAAAATCGATTGTCTGTTCACGATAGAATAAGAGTACCAGTGTCATATGATGACGACCTCCTTGGAGAGAATCTGAACGAAGAAGACATGACTTGA

Coding sequence (CDS)

ATGGATGGACAAGAGAACGTACTCGATGCCATATATGAAGATGATGACTTGGAAAATGACGATGTTGAAATGGCTGATGTGGAAGAAGGAGAGTTCGTCGACGGCAACGTACCACATGATACAGAGACAAGCAGTCTTACAGATGTCCATGCACCAAGTATAGATCATAAAAGTAAAAACCGTAGACGTCGGGCAAAGAAAAAGAAGAACAAAAGAAAGACTAGCGAGTCAGGTTCAAATGGCACAGATATTAACAGGTTTGTGTTAGATACATGCCGGCGTTTGAAGGAGAAAAAATCATACATGGTGTACACTGCTGTAGGTTGTCTGGGAGTCTCTGCATTAAGCGAACTTATCAACGAGGTCAATGCAGTTCAGGCTTGTGGAGGTCAGATGACTGCAGATGGCCGGCGCTTTCGAACAGGAGGTGGTATATTATGGAGCATCATCAAAACCCGGGAACCAAATGCCTATAAAGAGATTATGAAACGAGCGAAGGAATTTGAGAAACAATTTAAGCAACCAAATCTCAGGGGGGAAGCAACAGGAACTGAGAAAGAGAACTCTGAAAAGGTTCTTCCCCACATCTTCTCTGATGGATCTTCACGAGATCAACCGGGTATCGCCCAGAGCTTTACTCCAGAGCAAAATCAATCTAAACAACCAAATTCTGAAGAAAATCGATTGTCTGTTCACGATAGAATAAGAGTACCAGTGTCATATGATGACGACCTCCTTGGAGAGAATCTGAACGAAGAAGACATGACTTGA

Protein sequence

MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTETSSLTDVHAPSIDHKSKNRRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELINEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGEATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVSYDDDLLGENLNEEDMT

Homology

[Close]

BLAST of Moc07g22500 vs. NCBI nr
Match: XP_022153361.1 (uncharacterized protein LOC111020873 [Momordica charantia])

HSP 1 Score: 495.7 bits (1275), Expect = 2.3e-136
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTETSSLTDVHAPSIDHKSKN 60
           MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTETSSLTDVHAPSIDHKSKN
Sbjct: 1   MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTETSSLTDVHAPSIDHKSKN 60

Query: 61  RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN 120
           RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN
Sbjct: 61  RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN 120

Query: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE 180
           EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE
Sbjct: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE 180

Query: 181 ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS 240
           ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS
Sbjct: 181 ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS 240

Query: 241 YDDDLLGENLNEEDMT 257
           YDDDLLGENLNEEDMT
Sbjct: 241 YDDDLLGENLNEEDMT 256

[Close]

BLAST of Moc07g22500 vs. NCBI nr
Match: XP_023547831.1 (uncharacterized protein LOC111806680 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 397.9 bits (1021), Expect = 6.6e-107
Identity = 210/256 (82.03%), Postives = 230/256 (89.84%), Query Frame = 0


Query: 1   MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTETSSLTDVHAPSIDHKSKN 60
           MDGQEN+L+AIYE+DDLENDDVEM DVEEGEFV+GN+   TE SSLTDV APSIDH+SKN
Sbjct: 1   MDGQENILEAIYEEDDLENDDVEMVDVEEGEFVEGNI--STEKSSLTDVQAPSIDHRSKN 60

Query: 61  RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN 120
           R+RR+KKKKNKRKT ESGSNGTDINRFVLD CRRLKEKKSYMVYTAVGCLGVSALSELI 
Sbjct: 61  RKRRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIK 120

Query: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE 180
           EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+R E
Sbjct: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRRE 180

Query: 181 ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS 240
           AT   K +S++VL H+FS+G+S+DQP   QS TPEQNQSK+ NSEE R SVH+R+RVPVS
Sbjct: 181 ATEIGKASSQEVL-HLFSEGASQDQPDSIQSLTPEQNQSKESNSEEKRSSVHERLRVPVS 240

Query: 241 YDDDLLGENLNEEDMT 257
           YDDD+L EN  EED T
Sbjct: 241 YDDDILRENPKEEDTT 253

[Close]

BLAST of Moc07g22500 vs. NCBI nr
Match: XP_022959193.1 (uncharacterized protein LOC111460255 [Cucurbita moschata])

HSP 1 Score: 396.4 bits (1017), Expect = 1.9e-106
Identity = 210/254 (82.68%), Postives = 228/254 (89.76%), Query Frame = 0


Query: 1   MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTETSSLTDVHAPSIDHKSKN 60
           MDGQEN+L+AIYE+DDLENDDVEM DVEEGEFV+GN+   TE SSLTDV APSIDHKSKN
Sbjct: 1   MDGQENILEAIYEEDDLENDDVEMVDVEEGEFVEGNI--STEKSSLTDVQAPSIDHKSKN 60

Query: 61  RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN 120
           R+RR+KKKKNKRKT ESGSNGTDINRFVLD CRRLKEKKSYMVYTAVGCLGVSALSELI 
Sbjct: 61  RKRRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIK 120

Query: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE 180
           EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+R E
Sbjct: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRRE 180

Query: 181 ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS 240
           AT   K +S+ VL H+FS+G+S+DQP   QS TPEQNQSK+ NSEE R SVH+R+RVPVS
Sbjct: 181 ATEIGKASSQDVL-HLFSEGASQDQPDSIQSLTPEQNQSKESNSEEKRSSVHERLRVPVS 240

Query: 241 YDDDLLGENLNEED 255
           YDDD+L EN  EED
Sbjct: 241 YDDDILRENPKEED 251

[Close]

BLAST of Moc07g22500 vs. NCBI nr
Match: KAG7013367.1 (hypothetical protein SDJN02_23531, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 394.8 bits (1013), Expect = 5.6e-106
Identity = 209/254 (82.28%), Postives = 228/254 (89.76%), Query Frame = 0


Query: 1   MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTETSSLTDVHAPSIDHKSKN 60
           MDGQEN+L+AIYE+DDLENDDVEM DVEEGEFV+GN+   TE SSLTDV APSIDHKSKN
Sbjct: 64  MDGQENILEAIYEEDDLENDDVEMVDVEEGEFVEGNI--STEKSSLTDVQAPSIDHKSKN 123

Query: 61  RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN 120
           R+RR+KKKKNKRKT ESGSNGTDINRFVLD CRRLKEKKSYMVYTAVGCLGVSALSELI 
Sbjct: 124 RKRRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIK 183

Query: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE 180
           EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+R E
Sbjct: 184 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRRE 243

Query: 181 ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS 240
           AT   K +S++VL H+FS+G+S+DQP   QS TPEQNQSK+ N EE R SVH+R+RVPVS
Sbjct: 244 ATEIGKASSQEVL-HLFSEGASQDQPDSIQSLTPEQNQSKESNFEEKRSSVHERLRVPVS 303

Query: 241 YDDDLLGENLNEED 255
           YDDD+L EN  EED
Sbjct: 304 YDDDILRENPKEED 314

[Close]

BLAST of Moc07g22500 vs. NCBI nr
Match: KAG6574787.1 (hypothetical protein SDJN03_25426, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 394.8 bits (1013), Expect = 5.6e-106
Identity = 209/254 (82.28%), Postives = 228/254 (89.76%), Query Frame = 0


Query: 1   MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTETSSLTDVHAPSIDHKSKN 60
           MDGQEN+L+AIYE+DDLENDDVEM DVEEGEFV+GN+   TE SSLTDV APSIDHKSKN
Sbjct: 76  MDGQENILEAIYEEDDLENDDVEMVDVEEGEFVEGNI--STEKSSLTDVQAPSIDHKSKN 135

Query: 61  RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN 120
           R+RR+KKKKNKRKT ESGSNGTDINRFVLD CRRLKEKKSYMVYTAVGCLGVSALSELI 
Sbjct: 136 RKRRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIK 195

Query: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE 180
           EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+R E
Sbjct: 196 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRRE 255

Query: 181 ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS 240
           AT   K +S++VL H+FS+G+S+DQP   QS TPEQNQSK+ N EE R SVH+R+RVPVS
Sbjct: 256 ATEIGKASSQEVL-HLFSEGASQDQPDSIQSLTPEQNQSKESNFEEKRSSVHERLRVPVS 315

Query: 241 YDDDLLGENLNEED 255
           YDDD+L EN  EED
Sbjct: 316 YDDDILRENPKEED 326

[Close]

BLAST of Moc07g22500 vs. ExPASy TrEMBL
Match: A0A6J1DKE8 (Phosphorylated adapter RNA export protein OS=Momordica charantia OX=3673 GN=LOC111020873 PE=3 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 1.1e-136
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTETSSLTDVHAPSIDHKSKN 60
           MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTETSSLTDVHAPSIDHKSKN
Sbjct: 1   MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTETSSLTDVHAPSIDHKSKN 60

Query: 61  RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN 120
           RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN
Sbjct: 61  RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN 120

Query: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE 180
           EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE
Sbjct: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE 180

Query: 181 ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS 240
           ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS
Sbjct: 181 ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS 240

Query: 241 YDDDLLGENLNEEDMT 257
           YDDDLLGENLNEEDMT
Sbjct: 241 YDDDLLGENLNEEDMT 256

[Close]

BLAST of Moc07g22500 vs. ExPASy TrEMBL
Match: A0A6J1H592 (Phosphorylated adapter RNA export protein OS=Cucurbita moschata OX=3662 GN=LOC111460255 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 9.3e-107
Identity = 210/254 (82.68%), Postives = 228/254 (89.76%), Query Frame = 0


Query: 1   MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTETSSLTDVHAPSIDHKSKN 60
           MDGQEN+L+AIYE+DDLENDDVEM DVEEGEFV+GN+   TE SSLTDV APSIDHKSKN
Sbjct: 1   MDGQENILEAIYEEDDLENDDVEMVDVEEGEFVEGNI--STEKSSLTDVQAPSIDHKSKN 60

Query: 61  RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN 120
           R+RR+KKKKNKRKT ESGSNGTDINRFVLD CRRLKEKKSYMVYTAVGCLGVSALSELI 
Sbjct: 61  RKRRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIK 120

Query: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE 180
           EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+R E
Sbjct: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRRE 180

Query: 181 ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS 240
           AT   K +S+ VL H+FS+G+S+DQP   QS TPEQNQSK+ NSEE R SVH+R+RVPVS
Sbjct: 181 ATEIGKASSQDVL-HLFSEGASQDQPDSIQSLTPEQNQSKESNSEEKRSSVHERLRVPVS 240

Query: 241 YDDDLLGENLNEED 255
           YDDD+L EN  EED
Sbjct: 241 YDDDILRENPKEED 251

[Close]

BLAST of Moc07g22500 vs. ExPASy TrEMBL
Match: A0A6J1KUZ4 (Phosphorylated adapter RNA export protein OS=Cucurbita maxima OX=3661 GN=LOC111498940 PE=3 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.3e-103
Identity = 206/256 (80.47%), Postives = 225/256 (87.89%), Query Frame = 0


Query: 1   MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTETSSLTDVHAPSIDHKSKN 60
           MDGQEN+L+AIYE+DDLENDDVEM DVEEGE V+GN+   TE SSLTDV APSIDH+SKN
Sbjct: 1   MDGQENILEAIYEEDDLENDDVEMVDVEEGELVEGNI--STEKSSLTDVQAPSIDHRSKN 60

Query: 61  RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN 120
           R+RR+KKKKNKRKT ESGSNGTDINRFVLD CRRLKEKKSYMVYTAVGCLGVSALSE I 
Sbjct: 61  RKRRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSEFIK 120

Query: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE 180
           EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+R E
Sbjct: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRRE 180

Query: 181 ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS 240
           AT   K +S++VL H+FS G+S+DQP   QS TP QNQSK+ NSEE R SV +R+RVPVS
Sbjct: 181 ATEIGKASSQEVL-HLFSQGASQDQPDSIQSLTPLQNQSKESNSEEKRSSVLERLRVPVS 240

Query: 241 YDDDLLGENLNEEDMT 257
           YDDD+L EN  EED T
Sbjct: 241 YDDDILRENPKEEDTT 253

[Close]

BLAST of Moc07g22500 vs. ExPASy TrEMBL
Match: A0A0A0KBJ7 (Phosphorylated adapter RNA export protein OS=Cucumis sativus OX=3659 GN=Csa_6G076770 PE=3 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 3.1e-102
Identity = 204/256 (79.69%), Postives = 223/256 (87.11%), Query Frame = 0


Query: 1   MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTETSSLTDVHAPSIDHKSKN 60
           MDGQEN+L+AIYEDD LENDDVEMADVEEGEF+D N+  + E SS TDV APS D +SKN
Sbjct: 4   MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNI--NIEKSSFTDVQAPSTDQRSKN 63

Query: 61  RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN 120
           R+ R KKKKNKRK+SE GSNGTDINRFVL+ CR LKEKKSYMVYTAVGCLGVSALSELI 
Sbjct: 64  RKHRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIK 123

Query: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE 180
           EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+R E
Sbjct: 124 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRRE 183

Query: 181 ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS 240
           AT TEKE+S+KV PH+FS+GSSR+ P   QSF+ E NQSK+ NSEE   S+HDR+RVPVS
Sbjct: 184 ATETEKESSQKV-PHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVS 243

Query: 241 YDDDLLGENLNEEDMT 257
           YDDDLL EN  EED T
Sbjct: 244 YDDDLLQENPKEEDTT 256

[Close]

BLAST of Moc07g22500 vs. ExPASy TrEMBL
Match: A0A5D3DLH5 (Phosphorylated adapter RNA export protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00350 PE=3 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 4.1e-102
Identity = 204/257 (79.38%), Postives = 224/257 (87.16%), Query Frame = 0


Query: 1   MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTETSSLTDVHAPSIDHKSKN 60
           MDG EN+L+AIYE D+ ENDDVEMADVEEGEF+D N+  + E SS TDV APS D +SKN
Sbjct: 1   MDGHENILEAIYEADEFENDDVEMADVEEGEFIDANI--NIEKSSFTDVQAPSTDQRSKN 60

Query: 61  RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN 120
           R+RR KKKKNKRK+SE GSNGTDINRFVLD CRRLKEKKSYMVYTAVGCLGVSALSELI 
Sbjct: 61  RKRRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIK 120

Query: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE 180
           EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+R E
Sbjct: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRRE 180

Query: 181 ATGTEKENSEKVLPHIFSD-GSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPV 240
           AT TEKE+S+KV PH+FS+ GSSR+ P   QSFT E N+SK+ NSEE R S+HDR+RVP+
Sbjct: 181 ATETEKESSQKV-PHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPI 240

Query: 241 SYDDDLLGENLNEEDMT 257
           SYDDDLL EN  EED T
Sbjct: 241 SYDDDLLQENPKEEDTT 254

[Close]

BLAST of Moc07g22500 vs. TAIR 10
Match: AT3G20430.1 (CONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA export protein, RNA-binding domain (InterPro:IPR019385); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 3; Metazoa - 56; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 199.1 bits (505), Expect = 4.2e-51
Identity = 117/253 (46.25%), Postives = 160/253 (63.24%), Query Frame = 0


Query: 1   MDGQENVLDAIYEDDDLEN-DDVEMADVEEGEFVDGNVPHDTETSSLTDVHAPSIDHKS- 60
           M+G+E++LDAI E+D  EN +DVEM DVEEGE V   V HD ++    +     +  K  
Sbjct: 1   MEGEESLLDAINEEDGFENLEDVEMVDVEEGEIV---VDHDLDSGERQNDDGDGVKDKEA 60

Query: 61  --------KNRRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCL 120
                   +   +  +KKK K++          ++ FV DTCRRLKEKKSYM+YTAVGCL
Sbjct: 61  ILGEKNGLQQTNKNKRKKKKKKRKGPVMDKPMSVDWFVRDTCRRLKEKKSYMIYTAVGCL 120

Query: 121 GVSALSELINEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEK 180
           G++ALS+L+NEV A++ CGGQ+TADG R RT GG+LW+IIK R+P AY+EIMK+ KEFEK
Sbjct: 121 GIAALSDLVNEVVAIETCGGQVTADGTRKRTSGGVLWNIIKARQPEAYREIMKKTKEFEK 180

Query: 181 QFKQPNLRGEATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLS 240
           QF+QPN R ++     + S      + S   S D+  +++       +  +   E+ R S
Sbjct: 181 QFRQPNTRPKSGPKRDQGSSS--EGLASGNVSADEALVSEMCVMPVAEQTESKPEKERKS 240

Query: 241 VHDRIRVPVSYDD 244
           VH+RIRVPVSYDD
Sbjct: 241 VHERIRVPVSYDD 248

The following BLAST results are available for this feature:

BLAST of Moc07g22500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153361.1	2.3e-136	100.00	uncharacterized protein LOC111020873 [Momordica charantia]	[more]
XP_023547831.1	6.6e-107	82.03	uncharacterized protein LOC111806680 [Cucurbita pepo subsp. pepo]	[more]
XP_022959193.1	1.9e-106	82.68	uncharacterized protein LOC111460255 [Cucurbita moschata]	[more]
KAG7013367.1	5.6e-106	82.28	hypothetical protein SDJN02_23531, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6574787.1	5.6e-106	82.28	hypothetical protein SDJN03_25426, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Moc07g22500 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc07g22500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DKE8	1.1e-136	100.00	Phosphorylated adapter RNA export protein OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1H592	9.3e-107	82.68	Phosphorylated adapter RNA export protein OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1KUZ4	1.3e-103	80.47	Phosphorylated adapter RNA export protein OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A0A0KBJ7	3.1e-102	79.69	Phosphorylated adapter RNA export protein OS=Cucumis sativus OX=3659 GN=Csa_6G07...	[more]
A0A5D3DLH5	4.1e-102	79.38	Phosphorylated adapter RNA export protein OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Moc07g22500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20430.1	4.2e-51	46.25	CONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA export protein, RNA-bindi...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038092	Phosphorylated adapter RNA export protein, RNA-binding domain superfamily	GENE3D	1.10.10.1440		coord: 79..176 e-value: 1.2E-31 score: 110.7
IPR019385	Phosphorylated adapter RNA export protein, RNA-binding domain	PFAM	PF10258	RNA_GG_bind	coord: 88..167 e-value: 9.1E-24 score: 83.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..73
IPR039047	Phosphorylated adapter RNA export protein	PANTHER	PTHR13135	CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26	coord: 1..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc07g22500.1	Moc07g22500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0006408	snRNA export from nucleus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding