|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGTCGAAGGTACGCATTTTATATGTATATAACATTAGGTGTGCTTAGTTATTAATTATGATTAGTTGGGTCCGAGATAACCCTCATTGGTTCGTACTTTTCGTGCAGGGTAAATTCCCTGATCCGACCAAATATTTTGGACGTGGGGGTGGGCCCGATGATGATGATCCATCGGATCAAAGGCCTGATGAAGCCCCAACACCAGATGGAGGTCCGAAGAGTATGGACGAGTACCGGAGGCCGGAAGAGGTCCCTAAGACTGACGAGTATCGAACCGTGGAGCATGGTCCGAAGATTATGGACGATAATTCAAAGAATATGGACGTGGATCCGAAGAATATAGACGAGGATCCGATGATTACGGACGAGGATCCGATGTTTATGGTTGAAGACTAG mRNA sequence ATGTCGAAGGGTAAATTCCCTGATCCGACCAAATATTTTGGACGTGGGGGTGGGCCCGATGATGATGATCCATCGGATCAAAGGCCTGATGAAGCCCCAACACCAGATGGAGGTCCGAAGAGTATGGACGAGTACCGGAGGCCGGAAGAGGTCCCTAAGACTGACGAGTATCGAACCGTGGAGCATGGTCCGAAGATTATGGACGATAATTCAAAGAATATGGACGTGGATCCGAAGAATATAGACGAGGATCCGATGATTACGGACGAGGATCCGATGTTTATGGTTGAAGACTAG Coding sequence (CDS) ATGTCGAAGGGTAAATTCCCTGATCCGACCAAATATTTTGGACGTGGGGGTGGGCCCGATGATGATGATCCATCGGATCAAAGGCCTGATGAAGCCCCAACACCAGATGGAGGTCCGAAGAGTATGGACGAGTACCGGAGGCCGGAAGAGGTCCCTAAGACTGACGAGTATCGAACCGTGGAGCATGGTCCGAAGATTATGGACGATAATTCAAAGAATATGGACGTGGATCCGAAGAATATAGACGAGGATCCGATGATTACGGACGAGGATCCGATGTTTATGGTTGAAGACTAG Protein sequence MSKGKFPDPTKYFGRGGGPDDDDPSDQRPDEAPTPDGGPKSMDEYRRPEEVPKTDEYRTVEHGPKIMDDNSKNMDVDPKNIDEDPMITDEDPMFMVED
Homology
BLAST of Moc06g40080 vs. NCBI nr
Match: XP_022153201.1 (uncharacterized protein LOC111020757 [Momordica charantia]) HSP 1 Score: 82.0 bits (201), Expect = 3.1e-12 Identity = 42/64 (65.62%), Postives = 49/64 (76.56%), Query Frame = 0 Query: 1 MSKGKFPDPTKYFGRGGGPDDDDPSDQRPDEAPTPDGGPKSMDEYRRPEEVPKTDEYRTV 60 ++KGKFPD +KYFG GGGPDDD PSDQRPDE+P PDGG KSMDE +R +E +TDE Sbjct: 412 LAKGKFPDSSKYFGGGGGPDDDGPSDQRPDESPKPDGGRKSMDEDQRSDEDQRTDEDLET 471
Query: 61 EHGP 65 E P Sbjct: 472 EKEP 475
BLAST of Moc06g40080 vs. ExPASy TrEMBL
Match: A0A6J1DJX9 (uncharacterized protein LOC111020757 OS=Momordica charantia OX=3673 GN=LOC111020757 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.5e-12 Identity = 42/64 (65.62%), Postives = 49/64 (76.56%), Query Frame = 0 Query: 1 MSKGKFPDPTKYFGRGGGPDDDDPSDQRPDEAPTPDGGPKSMDEYRRPEEVPKTDEYRTV 60 ++KGKFPD +KYFG GGGPDDD PSDQRPDE+P PDGG KSMDE +R +E +TDE Sbjct: 412 LAKGKFPDSSKYFGGGGGPDDDGPSDQRPDESPKPDGGRKSMDEDQRSDEDQRTDEDLET 471
Query: 61 EHGP 65 E P Sbjct: 472 EKEP 475
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022153201.1 | 3.1e-12 | 65.63 | uncharacterized protein LOC111020757 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DJX9 | 1.5e-12 | 65.63 | uncharacterized protein LOC111020757 OS=Momordica charantia OX=3673 GN=LOC111020... | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 40..86 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..98 |
Relationships
The following mRNA feature(s) are a part of this gene:
|