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Moc06g39190 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACATCGGCGCGAGGAGGGATGAAGGATTTCTACAAGCAAACGAAAAAGGGCGGAATCTCTAAGCCCAAGCCCAAGCCCTCTTCCCGGAAGACCAAATCTCCGGCCAACGCTGCCGCTTCCGCCTCCGACGCCGTTCACCCGCCGGCTCTCGTTTCTTCGTTAGGTTAGGTCTCTTTAAACTATAATTACCCTTGTTTCTGTAAATAACCCTATGGACTTATGCCTCGTGATTATGGCGTTTCAGCACGTTTCTTAGTCCAGAAGATTCCGGATGTTCTTGCTATTAGGAGGCCATCCGGTGTTAGGGTTTTTTAACTTTTCGACTGAAATTTTTTTATCCGTTTAATTTTGTTCAGACTTATGCTTTGTGAATATGATTGATTAAGCACGTTTCAGTCGGGAAGTTCTTGGGTGTCAAATTCAGTTCAATACTTGAATTAAGGACGTACATTGTTTGGTTTTATTGATCTTTCGACTGTGGAATGCTATCCAATTAATATGTTTAGACTTATGCCTTGTGATTATGAAGGATTATGCACGTTCCACTCAAGAAGTTGTTGGGTATCAATTATGAAATAGTTGAATTAAGTACATCAATAGTTTGGATTTCTTAATCTTTCGACTGTAAAATAACTCCAATTAATATGTTTATGCTTATGCCTTGTGATTATGAAGGATTAAGCACGTTGCACTCGAGAAGATGTTGGGTATCAATTACAATATAGTTCTTCAATAGTTGGATTAAGGGCTTCAAATTTTTAGATTTATTTAACTTTTTACTGTGTACTGATGTGTTTGGATGCTTTATATGGCTATACTATTGGGATGTTTGTAAACACACATACTTTTTGCTTCATCAATTTTTATAACTGCAGTTTGTTTCATTTTGAATTTTGTTTTAGATGATTACAGCGAGTCTGAGAATATGCTGAGGCAATTTGATATGAACAGTGCCTATGGTCCTTGCCTTGGAATGACTAGAATGGAACGGTGGGAGCGTGCTCGTAAGTTTGGTTTGAACCCTCCAAAAGACATTGAGACACTCTTAAAGGCTGGCGAAGTGCAGTTAGAGTGCTTGTGGGATGGCCGAGTTTGAACGCCACTATGCTGTCTGTGTTATGTTTGGTTAATGTATGAAGCCTGTGCTTTTGAACAAAATGTTCAGCCTCTGGCTGAAATGATGATGCCCTCTTTTCCTATGATATGAATGTGCTCAAATGTTTGCTGATGTTGGCTCTCAAGTTATTTACTTGTCAGTAATGTGTTTTGCAGACCTCTAATGAGTAATTGTATAGCAAAAGTTGGTCACTTTCTTCCTTTCCTAGGTTTGTTGCTATATCAGCTCAAATGTTTTTAAGTTTCTAACTTGGTTTAATGTGTGGCTAAGATGTCTGTGGATTGAACTACATAGAATGAGGAGGAAGATTAGATAATGAGTATGTGAACATGAAAAGCTATAGCATTTGGTTTCTTGGTTTATTTAAAATGTTATTCAATTCAGACAATCCCAGTTCACTGTTTTCTTGTTCACGAGGTTCACTCTCGTCCTGGTGCCCACGGAGTTGGAACACTGTGGAATATGCAGTTCTGCAGGTTCTGTATGTTGAATTCTCTTGA ATGGCGACATCGGCGCGAGGAGGGATGAAGGATTTCTACAAGCAAACGAAAAAGGGCGGAATCTCTAAGCCCAAGCCCAAGCCCTCTTCCCGGAAGACCAAATCTCCGGCCAACGCTGCCGCTTCCGCCTCCGACGCCGTTCACCCGCCGGCTCTCGTTTCTTCGTTAGATGATTACAGCGAGTCTGAGAATATGCTGAGGCAATTTGATATGAACAGTGCCTATGGTCCTTGCCTTGGAATGACTAGAATGGAACGGTGGGAGCGTGCTCGTAAGTTTGGTTTGAACCCTCCAAAAGACATTGAGACACTCTTAAAGGCTGGCGAAGTGCAACCTCTAATGAGTAATTGTATAGCAAAAGTTGGTCACTTTCTTCCTTTCCTAGACAATCCCAGTTCACTGTTTTCTTGTTCACGAGGTTCACTCTCGTCCTGGTGCCCACGGAGTTGGAACACTGTGGAATATGCAGTTCTGCAGGTTCTGTATGTTGAATTCTCTTGA ATGGCGACATCGGCGCGAGGAGGGATGAAGGATTTCTACAAGCAAACGAAAAAGGGCGGAATCTCTAAGCCCAAGCCCAAGCCCTCTTCCCGGAAGACCAAATCTCCGGCCAACGCTGCCGCTTCCGCCTCCGACGCCGTTCACCCGCCGGCTCTCGTTTCTTCGTTAGATGATTACAGCGAGTCTGAGAATATGCTGAGGCAATTTGATATGAACAGTGCCTATGGTCCTTGCCTTGGAATGACTAGAATGGAACGGTGGGAGCGTGCTCGTAAGTTTGGTTTGAACCCTCCAAAAGACATTGAGACACTCTTAAAGGCTGGCGAAGTGCAACCTCTAATGAGTAATTGTATAGCAAAAGTTGGTCACTTTCTTCCTTTCCTAGACAATCCCAGTTCACTGTTTTCTTGTTCACGAGGTTCACTCTCGTCCTGGTGCCCACGGAGTTGGAACACTGTGGAATATGCAGTTCTGCAGGTTCTGTATGTTGAATTCTCTTGA MATSARGGMKDFYKQTKKGGISKPKPKPSSRKTKSPANAAASASDAVHPPALVSSLDDYSESENMLRQFDMNSAYGPCLGMTRMERWERARKFGLNPPKDIETLLKAGEVQPLMSNCIAKVGHFLPFLDNPSSLFSCSRGSLSSWCPRSWNTVEYAVLQVLYVEFS Homology
BLAST of Moc06g39190 vs. NCBI nr
Match: XP_022156193.1 (DNA polymerase delta subunit 4 [Momordica charantia]) HSP 1 Score: 220.7 bits (561), Expect = 9.4e-54 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of Moc06g39190 vs. NCBI nr
Match: XP_008467236.1 (PREDICTED: DNA polymerase delta subunit 4 [Cucumis melo] >KAA0055161.1 DNA polymerase delta subunit 4 [Cucumis melo var. makuwa] >TYK00302.1 DNA polymerase delta subunit 4 [Cucumis melo var. makuwa]) HSP 1 Score: 152.9 bits (385), Expect = 2.4e-33 Identity = 84/114 (73.68%), Postives = 89/114 (78.07%), Query Frame = 0
BLAST of Moc06g39190 vs. NCBI nr
Match: XP_022957680.1 (uncharacterized protein LOC111459143 [Cucurbita moschata]) HSP 1 Score: 151.8 bits (382), Expect = 5.4e-33 Identity = 82/113 (72.57%), Postives = 88/113 (77.88%), Query Frame = 0
BLAST of Moc06g39190 vs. NCBI nr
Match: KAG6605696.1 (DNA polymerase delta subunit 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035605.1 DNA polymerase delta subunit 4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 151.8 bits (382), Expect = 5.4e-33 Identity = 82/113 (72.57%), Postives = 89/113 (78.76%), Query Frame = 0
BLAST of Moc06g39190 vs. NCBI nr
Match: XP_004143634.1 (uncharacterized protein LOC101209940 [Cucumis sativus] >KGN50409.1 hypothetical protein Csa_000175 [Cucumis sativus]) HSP 1 Score: 150.6 bits (379), Expect = 1.2e-32 Identity = 83/114 (72.81%), Postives = 88/114 (77.19%), Query Frame = 0
BLAST of Moc06g39190 vs. ExPASy Swiss-Prot
Match: Q9CWP8 (DNA polymerase delta subunit 4 OS=Mus musculus OX=10090 GN=Pold4 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.8e-08 Identity = 26/58 (44.83%), Postives = 35/58 (60.34%), Query Frame = 0
BLAST of Moc06g39190 vs. ExPASy Swiss-Prot
Match: Q9HCU8 (DNA polymerase delta subunit 4 OS=Homo sapiens OX=9606 GN=POLD4 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07 Identity = 26/56 (46.43%), Postives = 37/56 (66.07%), Query Frame = 0
BLAST of Moc06g39190 vs. ExPASy Swiss-Prot
Match: O59835 (DNA polymerase delta subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cdm1 PE=2 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.4e-07 Identity = 24/53 (45.28%), Postives = 36/53 (67.92%), Query Frame = 0
BLAST of Moc06g39190 vs. ExPASy Swiss-Prot
Match: Q3T0X9 (DNA polymerase delta subunit 4 OS=Bos taurus OX=9913 GN=POLD4 PE=1 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.4e-07 Identity = 31/96 (32.29%), Postives = 50/96 (52.08%), Query Frame = 0
BLAST of Moc06g39190 vs. ExPASy TrEMBL
Match: A0A6J1DPY8 (DNA polymerase delta subunit 4 OS=Momordica charantia OX=3673 GN=LOC111023139 PE=4 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 4.5e-54 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of Moc06g39190 vs. ExPASy TrEMBL
Match: A0A5A7UNL0 (DNA polymerase delta subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00460 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 1.2e-33 Identity = 84/114 (73.68%), Postives = 89/114 (78.07%), Query Frame = 0
BLAST of Moc06g39190 vs. ExPASy TrEMBL
Match: A0A1S3CT23 (DNA polymerase delta subunit 4 OS=Cucumis melo OX=3656 GN=LOC103504636 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 1.2e-33 Identity = 84/114 (73.68%), Postives = 89/114 (78.07%), Query Frame = 0
BLAST of Moc06g39190 vs. ExPASy TrEMBL
Match: A0A6J1H180 (uncharacterized protein LOC111459143 OS=Cucurbita moschata OX=3662 GN=LOC111459143 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 2.6e-33 Identity = 82/113 (72.57%), Postives = 88/113 (77.88%), Query Frame = 0
BLAST of Moc06g39190 vs. ExPASy TrEMBL
Match: A0A0A0KND6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172885 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 5.8e-33 Identity = 83/114 (72.81%), Postives = 88/114 (77.19%), Query Frame = 0
BLAST of Moc06g39190 vs. TAIR 10
Match: AT1G09815.1 (polymerase delta 4 ) HSP 1 Score: 119.4 bits (298), Expect = 2.7e-27 Identity = 71/119 (59.66%), Postives = 85/119 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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