Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGTTGGAGAGTTGAGGAGGAAGTTTGGGGAGCTGAAAGATATTAATGAGAAGCAAGAATCAAGGGTGCGTTACCATGAGGCCAAATTCCAGAAAATCGTTTCTGGATACCTCATTTTAACACGCTTGTTCTTCTTTGGCATCTCCCAGACTTCTTCCTCCAAGTGCCACGATTGGTGGGTCATTCTGTCTTTAAGTCTTTTGTGTAGCTTTGTCTACTTTTTGCTTTTCCTGGATGCTGCCACTAGACTGTATCAGACCAAGGGCCAACTAGACATGATCTGCAAGGAACTAATTGAAGTTTGCCAACAAATTTTGGTAGCCCAAAACCAAGATGATGTGGATCTAGCAATGGAGGGTGGGGATTTTAGTGATGGATTTGAATTCGGTTTCCATGAGAAGATGCTCGTGCTTGACCACTTTAGATTTGTTGGGAGGAAAGTTTACATCTACTTCACTGTCTGTGCTTTGGTTGCTGTGACTGCTATTGAGTTATATGTTTCCAAGTATTTGTTGTGCAACTGA
mRNA sequence
ATGGCGGTTGGAGAGTTGAGGAGGAAGTTTGGGGAGCTGAAAGATATTAATGAGAAGCAAGAATCAAGGGTGCGTTACCATGAGGCCAAATTCCAGAAAATCGTTTCTGGATACCTCATTTTAACACGCTTGTTCTTCTTTGGCATCTCCCAGACTTCTTCCTCCAAGTGCCACGATTGGTGGGTCATTCTGTCTTTAAGTCTTTTGTGTAGCTTTGTCTACTTTTTGCTTTTCCTGGATGCTGCCACTAGACTGTATCAGACCAAGGGCCAACTAGACATGATCTGCAAGGAACTAATTGAAGTTTGCCAACAAATTTTGGTAGCCCAAAACCAAGATGATGTGGATCTAGCAATGGAGGGTGGGGATTTTAGTGATGGATTTGAATTCGGTTTCCATGAGAAGATGCTCGTGCTTGACCACTTTAGATTTGTTGGGAGGAAAGTTTACATCTACTTCACTGTCTGTGCTTTGGTTGCTGTGACTGCTATTGAGTTATATGTTTCCAAGTATTTGTTGTGCAACTGA
Coding sequence (CDS)
ATGGCGGTTGGAGAGTTGAGGAGGAAGTTTGGGGAGCTGAAAGATATTAATGAGAAGCAAGAATCAAGGGTGCGTTACCATGAGGCCAAATTCCAGAAAATCGTTTCTGGATACCTCATTTTAACACGCTTGTTCTTCTTTGGCATCTCCCAGACTTCTTCCTCCAAGTGCCACGATTGGTGGGTCATTCTGTCTTTAAGTCTTTTGTGTAGCTTTGTCTACTTTTTGCTTTTCCTGGATGCTGCCACTAGACTGTATCAGACCAAGGGCCAACTAGACATGATCTGCAAGGAACTAATTGAAGTTTGCCAACAAATTTTGGTAGCCCAAAACCAAGATGATGTGGATCTAGCAATGGAGGGTGGGGATTTTAGTGATGGATTTGAATTCGGTTTCCATGAGAAGATGCTCGTGCTTGACCACTTTAGATTTGTTGGGAGGAAAGTTTACATCTACTTCACTGTCTGTGCTTTGGTTGCTGTGACTGCTATTGAGTTATATGTTTCCAAGTATTTGTTGTGCAACTGA
Protein sequence
MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDWWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAMEGGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN
Homology
BLAST of Moc06g32900 vs. NCBI nr
Match:
XP_022157176.1 (uncharacterized protein LOC111023953 isoform X2 [Momordica charantia])
HSP 1 Score: 346.7 bits (888), Expect = 1.2e-91
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
Query: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDW 60
MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDW
Sbjct: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDW 60
Query: 61 WVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAME 120
WVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAME
Sbjct: 61 WVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAME 120
Query: 121 GGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 176
GGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN
Sbjct: 121 GGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175
BLAST of Moc06g32900 vs. NCBI nr
Match:
XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])
HSP 1 Score: 266.5 bits (680), Expect = 1.6e-67
Identity = 138/176 (78.41%), Postives = 154/176 (87.50%), Query Frame = 0
Query: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSS-KCHD 60
MA+GEL RKF ELKDINEKQESRVRY+E K Q IV GYLI TRLFFFGISQTSSS C D
Sbjct: 1 MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60
Query: 61 WWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAM 120
WWVIL+LSLLCSF+YFLLFLDA L++T+ QLD+ICKEL E+ QQILV++NQDDV L+M
Sbjct: 61 WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120
Query: 121 EGGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 176
E G+ S GFEFGFHEKML+LDHFR VGRKVYIYFTV AL+AVTAIELYVSKY+LCN
Sbjct: 121 ETGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176
BLAST of Moc06g32900 vs. NCBI nr
Match:
KAG6579338.1 (hypothetical protein SDJN03_23786, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 224.6 bits (571), Expect = 6.9e-55
Identity = 115/174 (66.09%), Postives = 140/174 (80.46%), Query Frame = 0
Query: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDW 60
MA GEL+R+F EL D+NEKQE++V YH+ K Q IV GYLI RLF +GISQ S KC++W
Sbjct: 1 MAHGELKRRFKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFIYGISQALSFKCNNW 60
Query: 61 WVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAME 120
WVIL+LSLL +F+YFLLFLDA T L++ + QLD+ICKELIE CQQ L+ +N+DD+DL +E
Sbjct: 61 WVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDL-VE 120
Query: 121 GGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLC 175
G+ DGFEFGFH+KML+LDH VGR VYIYF VCAL+AV AIELY KYLLC
Sbjct: 121 AGESRDGFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLC 173
BLAST of Moc06g32900 vs. NCBI nr
Match:
KAG7016840.1 (hypothetical protein SDJN02_21951, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 221.5 bits (563), Expect = 5.8e-54
Identity = 114/174 (65.52%), Postives = 139/174 (79.89%), Query Frame = 0
Query: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDW 60
MA GEL+R+ EL D+NEKQE++V YH+ K Q IV GYLI RLFF+GISQ S KC++W
Sbjct: 36 MAHGELKRRIKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFFYGISQALSFKCNNW 95
Query: 61 WVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAME 120
WVIL+LSLL +F+YFLLFLDA T L++ + QLD+ICKELIE CQQ L+ +N+DD+DL +E
Sbjct: 96 WVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDL-VE 155
Query: 121 GGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLC 175
G+ D FEFGFH+KML+LDH VGR VYIYF VCAL+AV AIELY KYLLC
Sbjct: 156 AGESCDRFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLC 208
BLAST of Moc06g32900 vs. NCBI nr
Match:
XP_022157130.1 (uncharacterized protein LOC111023927 [Momordica charantia])
HSP 1 Score: 207.6 bits (527), Expect = 8.7e-50
Identity = 111/178 (62.36%), Postives = 133/178 (74.72%), Query Frame = 0
Query: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSS--KCH 60
M GEL+R F LKD+ EKQESRV+YHE++ Q I YLI RLFFF ISQTSSS KC
Sbjct: 1 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60
Query: 61 DWWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQ-DDVDL 120
DWW++L LS+ C+FVYFL FL+A T LY+ + Q+D+ICKE E+CQQILVA++Q DDVDL
Sbjct: 61 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 120
Query: 121 AMEGGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 176
AME GD SDGF+F FH K+L FR V RK YI TV AL+AVTAIELY +L C+
Sbjct: 121 AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLYCD 178
BLAST of Moc06g32900 vs. ExPASy TrEMBL
Match:
A0A6J1DX74 (uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023953 PE=4 SV=1)
HSP 1 Score: 346.7 bits (888), Expect = 5.8e-92
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
Query: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDW 60
MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDW
Sbjct: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDW 60
Query: 61 WVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAME 120
WVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAME
Sbjct: 61 WVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAME 120
Query: 121 GGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 176
GGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN
Sbjct: 121 GGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175
BLAST of Moc06g32900 vs. ExPASy TrEMBL
Match:
A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)
HSP 1 Score: 266.5 bits (680), Expect = 7.6e-68
Identity = 138/176 (78.41%), Postives = 154/176 (87.50%), Query Frame = 0
Query: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSS-KCHD 60
MA+GEL RKF ELKDINEKQESRVRY+E K Q IV GYLI TRLFFFGISQTSSS C D
Sbjct: 1 MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60
Query: 61 WWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAM 120
WWVIL+LSLLCSF+YFLLFLDA L++T+ QLD+ICKEL E+ QQILV++NQDDV L+M
Sbjct: 61 WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120
Query: 121 EGGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 176
E G+ S GFEFGFHEKML+LDHFR VGRKVYIYFTV AL+AVTAIELYVSKY+LCN
Sbjct: 121 ETGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176
BLAST of Moc06g32900 vs. ExPASy TrEMBL
Match:
A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)
HSP 1 Score: 207.6 bits (527), Expect = 4.2e-50
Identity = 111/178 (62.36%), Postives = 133/178 (74.72%), Query Frame = 0
Query: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSS--KCH 60
M GEL+R F LKD+ EKQESRV+YHE++ Q I YLI RLFFF ISQTSSS KC
Sbjct: 1 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60
Query: 61 DWWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQ-DDVDL 120
DWW++L LS+ C+FVYFL FL+A T LY+ + Q+D+ICKE E+CQQILVA++Q DDVDL
Sbjct: 61 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 120
Query: 121 AMEGGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 176
AME GD SDGF+F FH K+L FR V RK YI TV AL+AVTAIELY +L C+
Sbjct: 121 AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLYCD 178
BLAST of Moc06g32900 vs. ExPASy TrEMBL
Match:
A0A5A7TMJ1 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00790 PE=4 SV=1)
HSP 1 Score: 204.9 bits (520), Expect = 2.7e-49
Identity = 110/175 (62.86%), Postives = 131/175 (74.86%), Query Frame = 0
Query: 3 VGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDWWV 62
+G+LRR F LKDIN+ QE+ +RY E K Q +V GYL RLFFFG+S S KC DWWV
Sbjct: 47 LGDLRRNFVLLKDINDNQETSLRYCETKLQNVVLGYLSWGRLFFFGVS--FSFKCKDWWV 106
Query: 63 ILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAMEGG 122
IL+L+L +F YFLLF+DA L +T QLD+I KEL E+CQQILVAQNQD+V L+ME G
Sbjct: 107 ILALTLFYTFFYFLLFMDAVIMLSRTHDQLDIIRKELAEICQQILVAQNQDNVGLSMEAG 166
Query: 123 DFSDGFEFGFHEKMLVLDHFRFV--GRKVYIYFTVCALVAVTAIELYVSKYLLCN 176
+ SDGFE FHE+M +LD FR V GRKVYIYF VC L+A+TAIELY K LLCN
Sbjct: 167 EDSDGFELSFHERMFMLDQFRVVETGRKVYIYFIVCPLLAITAIELYACKCLLCN 219
BLAST of Moc06g32900 vs. ExPASy TrEMBL
Match:
A0A0A0KJZ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139810 PE=4 SV=1)
HSP 1 Score: 197.2 bits (500), Expect = 5.7e-47
Identity = 107/175 (61.14%), Postives = 127/175 (72.57%), Query Frame = 0
Query: 3 VGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDWWV 62
+G+LR+ F LK IN+ QE+ +RY E K Q IV GYL RLFFFG S S KC DWWV
Sbjct: 81 LGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFS--FSFKCKDWWV 140
Query: 63 ILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAMEGG 122
+LSL+LL +F+Y LLF+DA L +T QL +I KEL E+CQQILVAQNQD VDL+MEGG
Sbjct: 141 VLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEGG 200
Query: 123 DFSDGFEFGFHEKMLVLDHFRFV--GRKVYIYFTVCALVAVTAIELYVSKYLLCN 176
+ DGFE FHE+M +LD F V GRK YIYF VCAL+ +TAIELY K LLCN
Sbjct: 201 ECCDGFELSFHERMFMLDQFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 253
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022157176.1 | 1.2e-91 | 100.00 | uncharacterized protein LOC111023953 isoform X2 [Momordica charantia] | [more] |
XP_022157182.1 | 1.6e-67 | 78.41 | uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... | [more] |
KAG6579338.1 | 6.9e-55 | 66.09 | hypothetical protein SDJN03_23786, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7016840.1 | 5.8e-54 | 65.52 | hypothetical protein SDJN02_21951, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022157130.1 | 8.7e-50 | 62.36 | uncharacterized protein LOC111023927 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DX74 | 5.8e-92 | 100.00 | uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1DSQ0 | 7.6e-68 | 78.41 | uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DS87 | 4.2e-50 | 62.36 | uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A5A7TMJ1 | 2.7e-49 | 62.86 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A0A0KJZ3 | 5.7e-47 | 61.14 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139810 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |