Moc06g32380 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g32380
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Reverse transcriptase domain-containing protein
Location	chr6: 24378855 .. 24379565 (-)
RNA-Seq Expression	Moc06g32380
Synteny	Moc06g32380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCCGGGCCAAGGCAGGGATCGTTTATGGTGGAAGGCTGATAGTAAAGGTTGTTTTACAGCGAAATCAGCTTTTATAGCTTTGACGGCTCCCTCCCCTAAATTGAACACGACCACAGCTTCTATGATATGGAATTTTAGGGTTCCAAAAAAGGTGAAATTTTTCCTATGGACTCTCTTTTATAGGAGCACAAACACAGGCGAGAGAATACAAAGAAAGCTCCCCCATTGGATGCTCTCCCCTTCGGTTTGTGGTCTCTGCCTAAGAAATTCAGATTCGGTGGATCATATTTTCATCCACTGTTTTTTTGTCACTCGAGCTTGGAACTATATGGCTTCGCTTTTGGATTTCTCCTTCTGTCTTCCTAAACATATAGATGACTTCGTAGCGGAAGGATTTGGTGGGGTGACGCTCAAAGGCGAAGCTGCGATCCTATGGCAATGTGCAGCGAGGGCTCTCCTTTGGCATCTTTGGAAAGAGACAAATAGTAGACTTTTTGAGGACAAATCTGTCCCTTTAGATTCTTTTTGTGTGAATACAAAACATACAGCTTCTTGGTGGGCCACAATCCACAAGAAGGCTTTTGGAAACTACAGTCTTTTTCTGATTTCACAGGATTGGAAAGAATGCGATTGTATAGTTCTCTTTGGGGAGGGTTCTCTCTACCCTCCGCCATTAGGTTGTTCTCGCCATTTTGGGCTCTTTTGA

mRNA sequence

ATGGTTCCGGGCCAAGGCAGGGATCGTTTATGGTGGAAGGCTGATAGTAAAGGTTGTTTTACAGCGAAATCAGCTTTTATAGCTTTGACGGCTCCCTCCCCTAAATTGAACACGACCACAGCTTCTATGATATGGAATTTTAGGGTTCCAAAAAAGGTGAAATTTTTCCTATGGACTCTCTTTTATAGGAGCACAAACACAGGCGAGAGAATACAAAGAAAGCTCCCCCATTGGATGCTCTCCCCTTCGGTTTGTGGTCTCTGCCTAAGAAATTCAGATTCGGTGGATCATATTTTCATCCACTGTTTTTTTGTCACTCGAGCTTGGAACTATATGGCTTCGCTTTTGGATTTCTCCTTCTGTCTTCCTAAACATATAGATGACTTCGTAGCGGAAGGATTTGGTGGGGTGACGCTCAAAGGCGAAGCTGCGATCCTATGGCAATGTGCAGCGAGGGCTCTCCTTTGGCATCTTTGGAAAGAGACAAATAGTAGACTTTTTGAGGACAAATCTGTCCCTTTAGATTCTTTTTGTGTGAATACAAAACATACAGCTTCTTGGTGGGCCACAATCCACAAGAAGGCTTTTGGAAACTACAGTCTTTTTCTGATTTCACAGGATTGGAAAGAATGCGATTGTATAGTTCTCTTTGGGGAGGGTTCTCTCTACCCTCCGCCATTAGGTTGTTCTCGCCATTTTGGGCTCTTTTGA

Coding sequence (CDS)

ATGGTTCCGGGCCAAGGCAGGGATCGTTTATGGTGGAAGGCTGATAGTAAAGGTTGTTTTACAGCGAAATCAGCTTTTATAGCTTTGACGGCTCCCTCCCCTAAATTGAACACGACCACAGCTTCTATGATATGGAATTTTAGGGTTCCAAAAAAGGTGAAATTTTTCCTATGGACTCTCTTTTATAGGAGCACAAACACAGGCGAGAGAATACAAAGAAAGCTCCCCCATTGGATGCTCTCCCCTTCGGTTTGTGGTCTCTGCCTAAGAAATTCAGATTCGGTGGATCATATTTTCATCCACTGTTTTTTTGTCACTCGAGCTTGGAACTATATGGCTTCGCTTTTGGATTTCTCCTTCTGTCTTCCTAAACATATAGATGACTTCGTAGCGGAAGGATTTGGTGGGGTGACGCTCAAAGGCGAAGCTGCGATCCTATGGCAATGTGCAGCGAGGGCTCTCCTTTGGCATCTTTGGAAAGAGACAAATAGTAGACTTTTTGAGGACAAATCTGTCCCTTTAGATTCTTTTTGTGTGAATACAAAACATACAGCTTCTTGGTGGGCCACAATCCACAAGAAGGCTTTTGGAAACTACAGTCTTTTTCTGATTTCACAGGATTGGAAAGAATGCGATTGTATAGTTCTCTTTGGGGAGGGTTCTCTCTACCCTCCGCCATTAGGTTGTTCTCGCCATTTTGGGCTCTTTTGA

Protein sequence

MVPGQGRDRLWWKADSKGCFTAKSAFIALTAPSPKLNTTTASMIWNFRVPKKVKFFLWTLFYRSTNTGERIQRKLPHWMLSPSVCGLCLRNSDSVDHIFIHCFFVTRAWNYMASLLDFSFCLPKHIDDFVAEGFGGVTLKGEAAILWQCAARALLWHLWKETNSRLFEDKSVPLDSFCVNTKHTASWWATIHKKAFGNYSLFLISQDWKECDCIVLFGEGSLYPPPLGCSRHFGLF

Homology

[Close]

BLAST of Moc06g32380 vs. NCBI nr
Match: RVW20303.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 147.1 bits (370), Expect = 1.9e-31
Identity = 68/201 (33.83%), Postives = 107/201 (53.23%), Query Frame = 0


Query: 8    DRLWWKADSKGCFTAKSAFIALTAPSPKLNTTTASMIWNFRVPKKVKFFLWTLFYRSTNT 67
            D+  W   S G FT KS F+AL+  S   +    +++WN +VP K+K F+W + ++  NT
Sbjct: 881  DKRSWSLSSSGLFTVKSFFLALSQISGLPSVFPTNLVWNSQVPFKIKSFVWLVAHKKVNT 940

Query: 68   GERIQRKLPHWMLSPSVCGLCLRNSDSVDHIFIHCFFVTRAWNYMASLLDFSFCLPKHID 127
             + +Q + P+  LSP +C LC+   ++VDH+F+HC      W+ +  L    +  P+ + 
Sbjct: 941  NDMLQWRRPYKTLSPDICMLCMEQGETVDHLFLHCSMTMGLWHRLFQLTKIDWVPPRSVF 1000

Query: 128  DFVAEGFGGVTLKGEAAILWQCAARALLWHLWKETNSRLFEDKSVPLDSFCVNTKHTASW 187
            D +A  F G        +LWQ A  A+LW +W+E N+R+FEDKS   ++        AS 
Sbjct: 1001 DMIAINFNGFGSSKRGIVLWQVACIAILWVVWRERNARIFEDKSKNSENLWDMIHFLASL 1060

Query: 188  WATIHKKAFGNYSLFLISQDW 209
            W +   K F    L +I  DW
Sbjct: 1061 WVSC-SKVFKGIPLNVIQLDW 1080

[Close]

BLAST of Moc06g32380 vs. NCBI nr
Match: RVW92607.1 (putative ribonuclease H protein [Vitis vinifera])

HSP 1 Score: 146.0 bits (367), Expect = 4.2e-31
Identity = 68/201 (33.83%), Postives = 104/201 (51.74%), Query Frame = 0


Query: 8   DRLWWKADSKGCFTAKSAFIALTAPSPKLNTTTASMIWNFRVPKKVKFFLWTLFYRSTNT 67
           D+  W     G FT KS F+AL+  S          +WN +VP KVK F+W + ++  NT
Sbjct: 15  DKRSWSISPSGLFTVKSFFLALSQHSESPPVFPTKFVWNSQVPFKVKSFVWLVAHKKLNT 74

Query: 68  GERIQRKLPHWMLSPSVCGLCLRNSDSVDHIFIHCFFVTRAWNYMASLLDFSFCLPKHID 127
            + +Q + PH  LSP++C LC+++ ++VDH+F+HC      W+ +  L    +  P+ I 
Sbjct: 75  NDLLQLRRPHKALSPNICKLCMKHGETVDHLFLHCSLTKGLWHRLFQLAKMDWVSPRSIS 134

Query: 128 DFVAEGFGGVTLKGEAAILWQCAARALLWHLWKETNSRLFEDKSVPLDSFCVNTKHTASW 187
           D     F G        +LWQ A  AL+W +W+E N+R+FEDK+        + +  AS 
Sbjct: 135 DMFFTNFNGFGSSKRGVVLWQDACIALMWVVWRERNARIFEDKARNSGCLWDSIRFLASL 194

Query: 188 WATIHKKAFGNYSLFLISQDW 209
           WA    K F    L ++  DW
Sbjct: 195 WA-FCSKVFKGIPLNMLQLDW 214

[Close]

BLAST of Moc06g32380 vs. NCBI nr
Match: RVX23716.1 (putative ribonuclease H protein [Vitis vinifera])

HSP 1 Score: 146.0 bits (367), Expect = 4.2e-31
Identity = 68/201 (33.83%), Postives = 104/201 (51.74%), Query Frame = 0


Query: 8   DRLWWKADSKGCFTAKSAFIALTAPSPKLNTTTASMIWNFRVPKKVKFFLWTLFYRSTNT 67
           D+  W     G FT KS F+AL+  S          +WN +VP KVK F+W + ++  NT
Sbjct: 191 DKRSWSISPSGLFTVKSFFLALSQHSESPPVFPTKFVWNSQVPFKVKSFVWLVAHKKLNT 250

Query: 68  GERIQRKLPHWMLSPSVCGLCLRNSDSVDHIFIHCFFVTRAWNYMASLLDFSFCLPKHID 127
            + +Q + PH  LSP++C LC+++ ++VDH+F+HC      W+ +  L    +  P+ I 
Sbjct: 251 NDLLQLRRPHKALSPNICKLCMKHGETVDHLFLHCSLTKGLWHRLFQLAKMDWVSPRSIS 310

Query: 128 DFVAEGFGGVTLKGEAAILWQCAARALLWHLWKETNSRLFEDKSVPLDSFCVNTKHTASW 187
           D     F G        +LWQ A  AL+W +W+E N+R+FEDK+        + +  AS 
Sbjct: 311 DMFFTNFNGFGSSKRGVVLWQDACIALMWVVWRERNARIFEDKARNSGCLWDSIRFLASL 370

Query: 188 WATIHKKAFGNYSLFLISQDW 209
           WA    K F    L ++  DW
Sbjct: 371 WA-FCSKVFKGIPLNMLQLDW 390

[Close]

BLAST of Moc06g32380 vs. NCBI nr
Match: RVW79087.1 (putative ribonuclease H protein [Vitis vinifera])

HSP 1 Score: 146.0 bits (367), Expect = 4.2e-31
Identity = 68/201 (33.83%), Postives = 104/201 (51.74%), Query Frame = 0


Query: 8   DRLWWKADSKGCFTAKSAFIALTAPSPKLNTTTASMIWNFRVPKKVKFFLWTLFYRSTNT 67
           D+  W     G FT KS F+AL+  S          +WN +VP KVK F+W + ++  NT
Sbjct: 15  DKRSWSISPSGLFTVKSFFLALSQHSESPPVFPTKFVWNSQVPFKVKSFVWLVAHKKLNT 74

Query: 68  GERIQRKLPHWMLSPSVCGLCLRNSDSVDHIFIHCFFVTRAWNYMASLLDFSFCLPKHID 127
            + +Q + PH  LSP++C LC+++ ++VDH+F+HC      W+ +  L    +  P+ I 
Sbjct: 75  NDLLQLRRPHKALSPNICKLCMKHGETVDHLFLHCSLTKGLWHRLFQLAKMDWVSPRSIS 134

Query: 128 DFVAEGFGGVTLKGEAAILWQCAARALLWHLWKETNSRLFEDKSVPLDSFCVNTKHTASW 187
           D     F G        +LWQ A  AL+W +W+E N+R+FEDK+        + +  AS 
Sbjct: 135 DMFFTNFNGFGSSKRGVVLWQDACIALMWVVWRERNARIFEDKARNSGCLWDSIRFLASL 194

Query: 188 WATIHKKAFGNYSLFLISQDW 209
           WA    K F    L ++  DW
Sbjct: 195 WA-FCSKVFKGIPLNMLQLDW 214

[Close]

BLAST of Moc06g32380 vs. NCBI nr
Match: RVW53010.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 146.0 bits (367), Expect = 4.2e-31
Identity = 68/201 (33.83%), Postives = 104/201 (51.74%), Query Frame = 0


Query: 8    DRLWWKADSKGCFTAKSAFIALTAPSPKLNTTTASMIWNFRVPKKVKFFLWTLFYRSTNT 67
            D+  W     G FT KS F+AL+  S          +WN +VP KVK F+W + ++  NT
Sbjct: 1494 DKRSWSISPSGLFTVKSFFLALSQHSESPPVFPTKFVWNSQVPFKVKSFVWLVAHKKLNT 1553

Query: 68   GERIQRKLPHWMLSPSVCGLCLRNSDSVDHIFIHCFFVTRAWNYMASLLDFSFCLPKHID 127
             + +Q + PH  LSP++C LC+++ ++VDH+F+HC      W+ +  L    +  P+ I 
Sbjct: 1554 NDLLQLRRPHKALSPNICKLCMKHGETVDHLFLHCSLTKGLWHRLFQLAKMDWVSPRSIS 1613

Query: 128  DFVAEGFGGVTLKGEAAILWQCAARALLWHLWKETNSRLFEDKSVPLDSFCVNTKHTASW 187
            D     F G        +LWQ A  AL+W +W+E N+R+FEDK+        + +  AS 
Sbjct: 1614 DMFFTNFNGFGSSKRGVVLWQDACIALMWVVWRERNARIFEDKARNSGCLWDSIRFLASL 1673

Query: 188  WATIHKKAFGNYSLFLISQDW 209
            WA    K F    L ++  DW
Sbjct: 1674 WA-FCSKVFKGIPLNMLQLDW 1693

[Close]

BLAST of Moc06g32380 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.7e-09
Identity = 47/195 (24.10%), Postives = 81/195 (41.54%), Query Frame = 0


Query: 7   RDRLWWKADSKGCFTAKSAFIALT---APSPKLNTTTASMIWNFRVPKKVKFFLWTLFYR 66
           RDRL WK    G F+ +SA+  LT    P P +  +  + +W  RVP++VK FLW +  +
Sbjct: 252 RDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNM-ASFFNCLWKVRVPERVKTFLWLVGNQ 311

Query: 67  STNTGERIQRKLPHWMLSPSVCGLCLRNSDSVDHIFIHCFFVTRAWNYMASLLDFSFCLP 126
           +  T E   R+    + + +VC +C    +S+ H+   C      W  +           
Sbjct: 312 AVMTEEERHRR---HLSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFS 371

Query: 127 KHIDDFVAEGFGGVTLKGEAAILWQCAARALLWHLWKETNSRLFEDKSVPLDSFCVNTKH 186
           K + +++ +  G     G   I W      ++W  WK     +F + +   D      K 
Sbjct: 372 KSLFEWLYDNLG--DRSGCEDIPWSTIFAVIIWWGWKWRCGNIFGENTKCRD----RVKF 431

Query: 187 TASWWATIHKKAFGN 199
              W   +++   GN
Sbjct: 432 VKEWAVEVYRAHSGN 436

[Close]

BLAST of Moc06g32380 vs. ExPASy TrEMBL
Match: A0A438CAL5 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_340 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 9.1e-32
Identity = 68/201 (33.83%), Postives = 107/201 (53.23%), Query Frame = 0


Query: 8    DRLWWKADSKGCFTAKSAFIALTAPSPKLNTTTASMIWNFRVPKKVKFFLWTLFYRSTNT 67
            D+  W   S G FT KS F+AL+  S   +    +++WN +VP K+K F+W + ++  NT
Sbjct: 881  DKRSWSLSSSGLFTVKSFFLALSQISGLPSVFPTNLVWNSQVPFKIKSFVWLVAHKKVNT 940

Query: 68   GERIQRKLPHWMLSPSVCGLCLRNSDSVDHIFIHCFFVTRAWNYMASLLDFSFCLPKHID 127
             + +Q + P+  LSP +C LC+   ++VDH+F+HC      W+ +  L    +  P+ + 
Sbjct: 941  NDMLQWRRPYKTLSPDICMLCMEQGETVDHLFLHCSMTMGLWHRLFQLTKIDWVPPRSVF 1000

Query: 128  DFVAEGFGGVTLKGEAAILWQCAARALLWHLWKETNSRLFEDKSVPLDSFCVNTKHTASW 187
            D +A  F G        +LWQ A  A+LW +W+E N+R+FEDKS   ++        AS 
Sbjct: 1001 DMIAINFNGFGSSKRGIVLWQVACIAILWVVWRERNARIFEDKSKNSENLWDMIHFLASL 1060

Query: 188  WATIHKKAFGNYSLFLISQDW 209
            W +   K F    L +I  DW
Sbjct: 1061 WVSC-SKVFKGIPLNVIQLDW 1080

[Close]

BLAST of Moc06g32380 vs. ExPASy TrEMBL
Match: A0A438EZ36 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_24 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.0e-31
Identity = 68/201 (33.83%), Postives = 104/201 (51.74%), Query Frame = 0


Query: 8    DRLWWKADSKGCFTAKSAFIALTAPSPKLNTTTASMIWNFRVPKKVKFFLWTLFYRSTNT 67
            D+  W     G FT KS F+AL+  S          +WN +VP KVK F+W + ++  NT
Sbjct: 1494 DKRSWSISPSGLFTVKSFFLALSQHSESPPVFPTKFVWNSQVPFKVKSFVWLVAHKKLNT 1553

Query: 68   GERIQRKLPHWMLSPSVCGLCLRNSDSVDHIFIHCFFVTRAWNYMASLLDFSFCLPKHID 127
             + +Q + PH  LSP++C LC+++ ++VDH+F+HC      W+ +  L    +  P+ I 
Sbjct: 1554 NDLLQLRRPHKALSPNICKLCMKHGETVDHLFLHCSLTKGLWHRLFQLAKMDWVSPRSIS 1613

Query: 128  DFVAEGFGGVTLKGEAAILWQCAARALLWHLWKETNSRLFEDKSVPLDSFCVNTKHTASW 187
            D     F G        +LWQ A  AL+W +W+E N+R+FEDK+        + +  AS 
Sbjct: 1614 DMFFTNFNGFGSSKRGVVLWQDACIALMWVVWRERNARIFEDKARNSGCLWDSIRFLASL 1673

Query: 188  WATIHKKAFGNYSLFLISQDW 209
            WA    K F    L ++  DW
Sbjct: 1674 WA-FCSKVFKGIPLNMLQLDW 1693

[Close]

BLAST of Moc06g32380 vs. ExPASy TrEMBL
Match: A0A438I7G2 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_1099 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.0e-31
Identity = 68/201 (33.83%), Postives = 104/201 (51.74%), Query Frame = 0


Query: 8   DRLWWKADSKGCFTAKSAFIALTAPSPKLNTTTASMIWNFRVPKKVKFFLWTLFYRSTNT 67
           D+  W     G FT KS F+AL+  S          +WN +VP KVK F+W + ++  NT
Sbjct: 15  DKRSWSISPSGLFTVKSFFLALSQHSESPPVFPTKFVWNSQVPFKVKSFVWLVAHKKLNT 74

Query: 68  GERIQRKLPHWMLSPSVCGLCLRNSDSVDHIFIHCFFVTRAWNYMASLLDFSFCLPKHID 127
            + +Q + PH  LSP++C LC+++ ++VDH+F+HC      W+ +  L    +  P+ I 
Sbjct: 75  NDLLQLRRPHKALSPNICKLCMKHGETVDHLFLHCSLTKGLWHRLFQLAKMDWVSPRSIS 134

Query: 128 DFVAEGFGGVTLKGEAAILWQCAARALLWHLWKETNSRLFEDKSVPLDSFCVNTKHTASW 187
           D     F G        +LWQ A  AL+W +W+E N+R+FEDK+        + +  AS 
Sbjct: 135 DMFFTNFNGFGSSKRGVVLWQDACIALMWVVWRERNARIFEDKARNSGCLWDSIRFLASL 194

Query: 188 WATIHKKAFGNYSLFLISQDW 209
           WA    K F    L ++  DW
Sbjct: 195 WA-FCSKVFKGIPLNMLQLDW 214

[Close]

BLAST of Moc06g32380 vs. ExPASy TrEMBL
Match: A0A438KR90 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_1170 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.0e-31
Identity = 68/201 (33.83%), Postives = 104/201 (51.74%), Query Frame = 0


Query: 8   DRLWWKADSKGCFTAKSAFIALTAPSPKLNTTTASMIWNFRVPKKVKFFLWTLFYRSTNT 67
           D+  W     G FT KS F+AL+  S          +WN +VP KVK F+W + ++  NT
Sbjct: 191 DKRSWSISPSGLFTVKSFFLALSQHSESPPVFPTKFVWNSQVPFKVKSFVWLVAHKKLNT 250

Query: 68  GERIQRKLPHWMLSPSVCGLCLRNSDSVDHIFIHCFFVTRAWNYMASLLDFSFCLPKHID 127
            + +Q + PH  LSP++C LC+++ ++VDH+F+HC      W+ +  L    +  P+ I 
Sbjct: 251 NDLLQLRRPHKALSPNICKLCMKHGETVDHLFLHCSLTKGLWHRLFQLAKMDWVSPRSIS 310

Query: 128 DFVAEGFGGVTLKGEAAILWQCAARALLWHLWKETNSRLFEDKSVPLDSFCVNTKHTASW 187
           D     F G        +LWQ A  AL+W +W+E N+R+FEDK+        + +  AS 
Sbjct: 311 DMFFTNFNGFGSSKRGVVLWQDACIALMWVVWRERNARIFEDKARNSGCLWDSIRFLASL 370

Query: 188 WATIHKKAFGNYSLFLISQDW 209
           WA    K F    L ++  DW
Sbjct: 371 WA-FCSKVFKGIPLNMLQLDW 390

[Close]

BLAST of Moc06g32380 vs. ExPASy TrEMBL
Match: A0A438EAW3 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDh000004_197 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.0e-31
Identity = 68/201 (33.83%), Postives = 104/201 (51.74%), Query Frame = 0


Query: 8   DRLWWKADSKGCFTAKSAFIALTAPSPKLNTTTASMIWNFRVPKKVKFFLWTLFYRSTNT 67
           D+  W     G FT KS F+AL+  S          +WN +VP KVK F+W + ++  NT
Sbjct: 314 DKRSWSISPSGLFTVKSFFLALSQHSESPPVFPTKFVWNSQVPFKVKSFVWLVAHKKLNT 373

Query: 68  GERIQRKLPHWMLSPSVCGLCLRNSDSVDHIFIHCFFVTRAWNYMASLLDFSFCLPKHID 127
            + +Q + PH  LSP++C LC+++ ++VDH+F+HC      W+ +  L    +  P+ I 
Sbjct: 374 NDLLQLRRPHKALSPNICKLCMKHGETVDHLFLHCSLTKGLWHRLFQLAKMDWVSPRSIS 433

Query: 128 DFVAEGFGGVTLKGEAAILWQCAARALLWHLWKETNSRLFEDKSVPLDSFCVNTKHTASW 187
           D     F G        +LWQ A  AL+W +W+E N+R+FEDK+        + +  AS 
Sbjct: 434 DMFFTNFNGFGSSKRGVVLWQDACIALMWVVWRERNARIFEDKARNSGCLWDSIRFLASL 493

Query: 188 WATIHKKAFGNYSLFLISQDW 209
           WA    K F    L ++  DW
Sbjct: 494 WA-FCSKVFKGIPLNMLQLDW 513

[Close]

BLAST of Moc06g32380 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.8e-08
Identity = 37/156 (23.72%), Postives = 63/156 (40.38%), Query Frame = 0


Query: 44  IWNFRVPKKVKFFLWTLFYRSTNTGERIQRKLPHWMLSPSVCGLCLRNSDSVDHIFIHCF 103
           IW  +   K+K FLW L   +  TG+ ++R+  H    P  C  C +  ++  H+F  CF
Sbjct: 18  IWKLKTAPKIKHFLWKLLSGALATGDNLKRR--HIRNHPQ-CHRCCQEDETSQHLFFDCF 77

Query: 104 FVTRAWNYMASLLDFSFCLPKHIDDFVAEGFGGVTLKGEAAILW-QCAARA--------- 163
           +  + W   AS +                   G+T++ +  +L   C A           
Sbjct: 78  YAQQVWR--ASGIPHQELRTT-----------GITMETKMELLLSSCLANRQPQLFNLAI 137

Query: 164 -LLWHLWKETNSRLFEDKSVPLDSFCVNTKHTASWW 189
            +LW LWK  N  +F+ KS+   +     ++    W
Sbjct: 138 WILWRLWKSRNQLVFQQKSISWQNTLQRARNDVQEW 157

[Close]

BLAST of Moc06g32380 vs. TAIR 10
Match: AT1G45063.1 (copper ion binding;electron carriers )

HSP 1 Score: 46.2 bits (108), Expect = 4.2e-05
Identity = 25/92 (27.17%), Postives = 42/92 (45.65%), Query Frame = 0


Query: 82  PSVCGLCLRNSDSVDHIFIHCFFVTRAWNYMASLLDFSFCLPKHIDDFVAEGFGGVTLKG 141
           PS+C LC    ++  H+F  C F    W++  S    +   P  +    A          
Sbjct: 281 PSLCLLCNALDETRQHVFFDCPFSHEVWSFFCSNARVT---PPRMFKDSARWLRHPCRDK 340

Query: 142 EAAILWQCAARALLWHLWKETNSRLFEDKSVP 174
           + A + + A +A ++H+W+E N RL  +KS P
Sbjct: 341 KVAFILKLAYQASVYHIWRERNIRLNSNKSFP 369

[Close]

BLAST of Moc06g32380 vs. TAIR 10
Match: AT1G33710.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.6e-04
Identity = 37/167 (22.16%), Postives = 72/167 (43.11%), Query Frame = 0


Query: 12  WKADSKGC--FTAKSAFIALTAPSPKLNTTTASMIWNFRVPKKVKFFLWTLFYRSTNTGE 71
           W  + K C  F++   + AL   S  +  + A  +W      K  F +W        T  
Sbjct: 20  WVVEDKLCNGFSSAKTWAALRPRSDVV--SWAKTVWFKGATPKHAFHMWVTNLDRLPT-- 79

Query: 72  RIQRKLPHW-MLSPSVCGLCLRNSDSVDHIFIHCFFVTRAWNYMASLLD---FSFCLPKH 131
             + +L  W M   + CGLC  + +  DH+F+ C F    W+ ++  L+   FSF +   
Sbjct: 80  --KTRLASWGMQLQTTCGLCSLDIEDRDHLFLTCEFACFLWHTVSVRLELPAFSFVVWND 139

Query: 132 IDDFVAEGFGGVTLKGEAAILWQCAARALLWHLWKETNSRLFEDKSV 173
           + D+  +       +     L +   +++L+ +WK+ N+ L   +++
Sbjct: 140 LMDWTLQ-----RNRRSPPTLRKLIVQSVLYAIWKQRNNFLHNHETI 175

The following BLAST results are available for this feature:

BLAST of Moc06g32380 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW20303.1	1.9e-31	33.83	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
RVW92607.1	4.2e-31	33.83	putative ribonuclease H protein [Vitis vinifera]	[more]
RVX23716.1	4.2e-31	33.83	putative ribonuclease H protein [Vitis vinifera]	[more]
RVW79087.1	4.2e-31	33.83	putative ribonuclease H protein [Vitis vinifera]	[more]
RVW53010.1	4.2e-31	33.83	LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]	[more]

BLAST of Moc06g32380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C2F6	2.7e-09	24.10	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Moc06g32380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438CAL5	9.1e-32	33.83	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A0A438EZ36	2.0e-31	33.83	LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF...	[more]
A0A438I7G2	2.0e-31	33.83	Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_1099 ...	[more]
A0A438KR90	2.0e-31	33.83	Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_1170 ...	[more]
A0A438EAW3	2.0e-31	33.83	Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDh000004_197 P...	[more]

BLAST of Moc06g32380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25270.1	1.8e-08	23.72	Ribonuclease H-like superfamily protein	[more]
AT1G45063.1	4.2e-05	27.17	copper ion binding;electron carriers	[more]
AT1G33710.1	1.6e-04	22.16	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 20..109 e-value: 2.2E-14 score: 53.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g32380.1	Moc06g32380.1	mRNA