Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTCGTACGATGGGTCTGGCGATCCGGTGTCGTACGTCGAGGTGTTCGAAGCGAAAATGGATTTTTTGGCCGCAAGCGATGGTATGAAGTGCCGAGCATTTCAAATAGCGTTGGAGGGCTCGGCAAGATTGTGGTATCGGCAGCTGAAGCCGAAGTCAATTGACAGTTATCAACAGTTACAGAGGTTGTGCATCAACCAGTTCTCGGCCAGGGATTTGCTGAAGCTGCCGCCATCCCACCTCGGAACGGTGAAGCAACGCGAGTATGAGTCCCTTACAAAATACATCTCCCGGTTCATGGACGAGCATGTCAAGGTGGTGAGTTGCACCGATTACATCGCCATGATGTATTTTACAATAGGGTTCAATGACCAGAACTTGACGATCGATTTCGGGAGTCGCCCTCTGGCCTCCTTGAACGAGATGCTCGCCAGAGCTCGTCAGTATATTGATAGGTTAGGACTGTGGAAGGCCAACAGAGCCAGGCGCAGTAGCCACAACAAAGAATAA
mRNA sequence
ATGAGCTCGTACGATGGGTCTGGCGATCCGGTGTCGTACGTCGAGGTGTTCGAAGCGAAAATGGATTTTTTGGCCGCAAGCGATGGTATGAAGTGCCGAGCATTTCAAATAGCGTTGGAGGGCTCGGCAAGATTGTGGTATCGGCAGCTGAAGCCGAAGTCAATTGACAGTTATCAACAGTTACAGAGGTTGTGCATCAACCAGTTCTCGGCCAGGGATTTGCTGAAGCTGCCGCCATCCCACCTCGGAACGGTGAAGCAACGCGAGTATGAGTCCCTTACAAAATACATCTCCCGGTTCATGGACGAGCATGTCAAGGTGGTGAGTTGCACCGATTACATCGCCATGATGTATTTTACAATAGGGTTCAATGACCAGAACTTGACGATCGATTTCGGGAGTCGCCCTCTGGCCTCCTTGAACGAGATGCTCGCCAGAGCTCGTCAGTATATTGATAGGTTAGGACTGTGGAAGGCCAACAGAGCCAGGCGCAGTAGCCACAACAAAGAATAA
Coding sequence (CDS)
ATGAGCTCGTACGATGGGTCTGGCGATCCGGTGTCGTACGTCGAGGTGTTCGAAGCGAAAATGGATTTTTTGGCCGCAAGCGATGGTATGAAGTGCCGAGCATTTCAAATAGCGTTGGAGGGCTCGGCAAGATTGTGGTATCGGCAGCTGAAGCCGAAGTCAATTGACAGTTATCAACAGTTACAGAGGTTGTGCATCAACCAGTTCTCGGCCAGGGATTTGCTGAAGCTGCCGCCATCCCACCTCGGAACGGTGAAGCAACGCGAGTATGAGTCCCTTACAAAATACATCTCCCGGTTCATGGACGAGCATGTCAAGGTGGTGAGTTGCACCGATTACATCGCCATGATGTATTTTACAATAGGGTTCAATGACCAGAACTTGACGATCGATTTCGGGAGTCGCCCTCTGGCCTCCTTGAACGAGATGCTCGCCAGAGCTCGTCAGTATATTGATAGGTTAGGACTGTGGAAGGCCAACAGAGCCAGGCGCAGTAGCCACAACAAAGAATAA
Protein sequence
MSSYDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRFMDEHVKVVSCTDYIAMMYFTIGFNDQNLTIDFGSRPLASLNEMLARARQYIDRLGLWKANRARRSSHNKE
Homology
BLAST of Moc06g17580 vs. NCBI nr
Match:
XP_022152851.1 (uncharacterized protein LOC111020475 [Momordica charantia])
HSP 1 Score: 250.8 bits (639), Expect = 8.7e-63
Identity = 127/162 (78.40%), Postives = 135/162 (83.33%), Query Frame = 0
Query: 1 MSSYDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQ 60
MSSYDGSGDP+SYVEVFE KMDFLA SD MKC AFQI LEGS RLWYRQLK +SIDSYQQ
Sbjct: 1 MSSYDGSGDPISYVEVFEGKMDFLAVSDAMKCGAFQITLEGSTRLWYRQLKLRSIDSYQQ 60
Query: 61 LQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRFMDEHVKVVSCTDYIAMMYFT 120
L+RL INQFS R LKLP SHLGTVKQR+ ES T YI+RFMDEHVKVVSCTD IAMMYFT
Sbjct: 61 LRRLFINQFSTRQFLKLPLSHLGTVKQRDNESFTVYIARFMDEHVKVVSCTDDIAMMYFT 120
Query: 121 IGFNDQNLTIDFGSRPLASLNEMLARARQYIDRLGLWKANRA 163
G ND+NLTI+FGS A LNEM ARARQYID L LW A+ A
Sbjct: 121 TGLNDRNLTIEFGSYQPAYLNEMFARARQYIDGLELWNADGA 162
BLAST of Moc06g17580 vs. NCBI nr
Match:
XP_022149029.1 (uncharacterized protein LOC111017548 [Momordica charantia])
HSP 1 Score: 242.3 bits (617), Expect = 3.1e-60
Identity = 122/150 (81.33%), Postives = 133/150 (88.67%), Query Frame = 0
Query: 21 MDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPS 80
MDFLAASD +KCRAFQIALEGS RLWY+QLKP+SIDSYQQL+RL INQFSAR LLKLPPS
Sbjct: 1 MDFLAASDAIKCRAFQIALEGSVRLWYQQLKPRSIDSYQQLRRLFINQFSARQLLKLPPS 60
Query: 81 HLGTVKQREYESLTKYISRFMDEHVKVVSCTDYIAMMYFTIGFNDQNLTIDFGSRPLASL 140
HL TVKQR+ ESLT+YI+R MDEHVKVVSCTD IAMMYFT G ND+NLTI+FGSRP ASL
Sbjct: 61 HLETVKQRDNESLTEYIARLMDEHVKVVSCTDDIAMMYFTTGLNDRNLTIEFGSRPPASL 120
Query: 141 NEMLARARQYIDRLGLWKANRARRSSHNKE 171
N+MLARARQYID L LWKA ARRSS K+
Sbjct: 121 NKMLARARQYIDGLELWKAKGARRSSRGKD 150
BLAST of Moc06g17580 vs. NCBI nr
Match:
XP_022159250.1 (uncharacterized protein LOC111025663 [Momordica charantia])
HSP 1 Score: 159.1 bits (401), Expect = 3.4e-35
Identity = 77/152 (50.66%), Postives = 106/152 (69.74%), Query Frame = 0
Query: 1 MSSYDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQ 60
M YDGS DP YVEVFE MDF AA+D +KCRAFQIAL SARLWYR+L +SI +Y Q
Sbjct: 51 MKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTDSARLWYRRLPARSISTYSQ 110
Query: 61 LQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRFMDEHVKVVSCTDYIAMMYFT 120
L++ I+QFS+R + +HL T++Q+E E+L +Y++RF++E +KV C+D AM YF
Sbjct: 111 LRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRFLEEQLKVAHCSDDSAMCYFL 170
Query: 121 IGFNDQNLTIDFGSRPLASLNEMLARARQYID 153
G D+NLT+ G A+ E+L +A++ ID
Sbjct: 171 TGLADENLTVKLGEEAPATFAEVLQKAKKVID 202
BLAST of Moc06g17580 vs. NCBI nr
Match:
XP_022156542.1 (uncharacterized protein LOC111023421 [Momordica charantia])
HSP 1 Score: 156.8 bits (395), Expect = 1.7e-34
Identity = 79/160 (49.38%), Postives = 106/160 (66.25%), Query Frame = 0
Query: 4 YDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQR 63
YDG+ DP YVEVFE MDF AASD +KCRAFQIAL GSARLWYR+L +SI +Y QL+R
Sbjct: 89 YDGTKDPKDYVEVFEGLMDFQAASDAIKCRAFQIALTGSARLWYRRLPXRSISTYSQLRR 148
Query: 64 LCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRFMDEHVKVVSCTDYIAMMYFTIGF 123
+ QFS+R K +HL T++Q+E E+L +Y++RF +E +KV C+D AM YF G
Sbjct: 149 EFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTGL 208
Query: 124 NDQNLTIDFGSRPLASLNEMLARARQYIDRLGLWKANRAR 164
D+ LT+ G A+ E+L +A++ ID L + R
Sbjct: 209 ADEALTVKLGEEAPATFAEVLQKAKKVIDGQELLRTKTGR 248
BLAST of Moc06g17580 vs. NCBI nr
Match:
XP_022156088.1 (uncharacterized protein LOC111023060 [Momordica charantia])
HSP 1 Score: 156.0 bits (393), Expect = 2.9e-34
Identity = 76/152 (50.00%), Postives = 105/152 (69.08%), Query Frame = 0
Query: 1 MSSYDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQ 60
M SYDGS DP YVEVFE MDF AA+D +KCRAFQIAL GSARLWYR+L +SI +Y Q
Sbjct: 157 MKSYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQ 216
Query: 61 LQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRFMDEHVKVVSCTDYIAMMYFT 120
L++ I+QF +R + +HL T++Q+E ++L +YI+RF +E +KVV C+D +M YF
Sbjct: 217 LRKEFISQFFSRHYDRKTTTHLATIRQKEGKTLKEYITRFQEEQLKVVHCSDDSSMCYFL 276
Query: 121 IGFNDQNLTIDFGSRPLASLNEMLARARQYID 153
G D+ T+ G LA+ E+L +++ID
Sbjct: 277 TGLADETPTVKLGEEALATFAEVLQMEKKFID 308
BLAST of Moc06g17580 vs. ExPASy TrEMBL
Match:
A0A6J1DIZ8 (uncharacterized protein LOC111020475 OS=Momordica charantia OX=3673 GN=LOC111020475 PE=4 SV=1)
HSP 1 Score: 250.8 bits (639), Expect = 4.2e-63
Identity = 127/162 (78.40%), Postives = 135/162 (83.33%), Query Frame = 0
Query: 1 MSSYDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQ 60
MSSYDGSGDP+SYVEVFE KMDFLA SD MKC AFQI LEGS RLWYRQLK +SIDSYQQ
Sbjct: 1 MSSYDGSGDPISYVEVFEGKMDFLAVSDAMKCGAFQITLEGSTRLWYRQLKLRSIDSYQQ 60
Query: 61 LQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRFMDEHVKVVSCTDYIAMMYFT 120
L+RL INQFS R LKLP SHLGTVKQR+ ES T YI+RFMDEHVKVVSCTD IAMMYFT
Sbjct: 61 LRRLFINQFSTRQFLKLPLSHLGTVKQRDNESFTVYIARFMDEHVKVVSCTDDIAMMYFT 120
Query: 121 IGFNDQNLTIDFGSRPLASLNEMLARARQYIDRLGLWKANRA 163
G ND+NLTI+FGS A LNEM ARARQYID L LW A+ A
Sbjct: 121 TGLNDRNLTIEFGSYQPAYLNEMFARARQYIDGLELWNADGA 162
BLAST of Moc06g17580 vs. ExPASy TrEMBL
Match:
A0A6J1D5T3 (uncharacterized protein LOC111017548 OS=Momordica charantia OX=3673 GN=LOC111017548 PE=4 SV=1)
HSP 1 Score: 242.3 bits (617), Expect = 1.5e-60
Identity = 122/150 (81.33%), Postives = 133/150 (88.67%), Query Frame = 0
Query: 21 MDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPS 80
MDFLAASD +KCRAFQIALEGS RLWY+QLKP+SIDSYQQL+RL INQFSAR LLKLPPS
Sbjct: 1 MDFLAASDAIKCRAFQIALEGSVRLWYQQLKPRSIDSYQQLRRLFINQFSARQLLKLPPS 60
Query: 81 HLGTVKQREYESLTKYISRFMDEHVKVVSCTDYIAMMYFTIGFNDQNLTIDFGSRPLASL 140
HL TVKQR+ ESLT+YI+R MDEHVKVVSCTD IAMMYFT G ND+NLTI+FGSRP ASL
Sbjct: 61 HLETVKQRDNESLTEYIARLMDEHVKVVSCTDDIAMMYFTTGLNDRNLTIEFGSRPPASL 120
Query: 141 NEMLARARQYIDRLGLWKANRARRSSHNKE 171
N+MLARARQYID L LWKA ARRSS K+
Sbjct: 121 NKMLARARQYIDGLELWKAKGARRSSRGKD 150
BLAST of Moc06g17580 vs. ExPASy TrEMBL
Match:
A0A6J1DY58 (uncharacterized protein LOC111025663 OS=Momordica charantia OX=3673 GN=LOC111025663 PE=4 SV=1)
HSP 1 Score: 159.1 bits (401), Expect = 1.7e-35
Identity = 77/152 (50.66%), Postives = 106/152 (69.74%), Query Frame = 0
Query: 1 MSSYDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQ 60
M YDGS DP YVEVFE MDF AA+D +KCRAFQIAL SARLWYR+L +SI +Y Q
Sbjct: 51 MKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTDSARLWYRRLPARSISTYSQ 110
Query: 61 LQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRFMDEHVKVVSCTDYIAMMYFT 120
L++ I+QFS+R + +HL T++Q+E E+L +Y++RF++E +KV C+D AM YF
Sbjct: 111 LRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRFLEEQLKVAHCSDDSAMCYFL 170
Query: 121 IGFNDQNLTIDFGSRPLASLNEMLARARQYID 153
G D+NLT+ G A+ E+L +A++ ID
Sbjct: 171 TGLADENLTVKLGEEAPATFAEVLQKAKKVID 202
BLAST of Moc06g17580 vs. ExPASy TrEMBL
Match:
A0A6J1DS95 (uncharacterized protein LOC111023421 OS=Momordica charantia OX=3673 GN=LOC111023421 PE=4 SV=1)
HSP 1 Score: 156.8 bits (395), Expect = 8.3e-35
Identity = 79/160 (49.38%), Postives = 106/160 (66.25%), Query Frame = 0
Query: 4 YDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQR 63
YDG+ DP YVEVFE MDF AASD +KCRAFQIAL GSARLWYR+L +SI +Y QL+R
Sbjct: 89 YDGTKDPKDYVEVFEGLMDFQAASDAIKCRAFQIALTGSARLWYRRLPXRSISTYSQLRR 148
Query: 64 LCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRFMDEHVKVVSCTDYIAMMYFTIGF 123
+ QFS+R K +HL T++Q+E E+L +Y++RF +E +KV C+D AM YF G
Sbjct: 149 EFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTGL 208
Query: 124 NDQNLTIDFGSRPLASLNEMLARARQYIDRLGLWKANRAR 164
D+ LT+ G A+ E+L +A++ ID L + R
Sbjct: 209 ADEALTVKLGEEAPATFAEVLQKAKKVIDGQELLRTKTGR 248
BLAST of Moc06g17580 vs. ExPASy TrEMBL
Match:
A0A6J1DPN4 (uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023060 PE=4 SV=1)
HSP 1 Score: 156.0 bits (393), Expect = 1.4e-34
Identity = 76/152 (50.00%), Postives = 105/152 (69.08%), Query Frame = 0
Query: 1 MSSYDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQ 60
M SYDGS DP YVEVFE MDF AA+D +KCRAFQIAL GSARLWYR+L +SI +Y Q
Sbjct: 157 MKSYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQ 216
Query: 61 LQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRFMDEHVKVVSCTDYIAMMYFT 120
L++ I+QF +R + +HL T++Q+E ++L +YI+RF +E +KVV C+D +M YF
Sbjct: 217 LRKEFISQFFSRHYDRKTTTHLATIRQKEGKTLKEYITRFQEEQLKVVHCSDDSSMCYFL 276
Query: 121 IGFNDQNLTIDFGSRPLASLNEMLARARQYID 153
G D+ T+ G LA+ E+L +++ID
Sbjct: 277 TGLADETPTVKLGEEALATFAEVLQMEKKFID 308
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DIZ8 | 4.2e-63 | 78.40 | uncharacterized protein LOC111020475 OS=Momordica charantia OX=3673 GN=LOC111020... | [more] |
A0A6J1D5T3 | 1.5e-60 | 81.33 | uncharacterized protein LOC111017548 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
A0A6J1DY58 | 1.7e-35 | 50.66 | uncharacterized protein LOC111025663 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1DS95 | 8.3e-35 | 49.38 | uncharacterized protein LOC111023421 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DPN4 | 1.4e-34 | 50.00 | uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
Match Name | E-value | Identity | Description | |