Moc06g14580 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g14580
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Thioredoxin
Location	chr6: 11443043 .. 11445023 (+)
RNA-Seq Expression	Moc06g14580
Synteny	Moc06g14580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTGCGTCTCTCTCTCTCCCCGCCGTCGATCAGATCCTCGCCGTCTCTGCCGTGCAACGGCAAGCAACCGATCGCCGCAGTTTCCGACTCAAAGAGCACCTGCTTCAGTTCAAGGAGCTTGAGTGTCACTAGTAGCCGGAGCATTGGTATTTCCGGTGGAAATCGGACCTTCAAGGTCAATTCCAGCTTGGAAACTGCCGGCGCTACCGTCGGCCAGGTCACCGAGGTCAACAAAGACACTTTCTGGCCCATCGTCAATGCGGCCGGCGATAAAACCGTTGTGCTCGATATGTACACCCAATGGTCTGTCTTTCTGTGCATCCATATCCCTATGCTTCTTATTTTTGTGGTTTCCGTAAATTACTGCTTGAGATTGTTGAGTAACGGCTGCGAGAGCTTACTTCTGGTTTACTGATTTTTTTTTTCGAAAATTGGACATGCTTGGCGATGCTTAGTATAGTAGAGTATAGATATATTGTCTATCTTTGTGCCTTGTTTATGGATCTCGTGGTTTGGAAAAATTGGAAAGAAACTTTGGTGTTACCTAGGCGTCCTCTGTCAAATGATTTAAAATTTTATATTAATAATCAGTAATCACTGTGAGTTGATGGCGCTCGTTTTATTTTAATATTGAGTTTGGCTTTGGTTAAAGAAATCATGGGAAGACAGTTTCTTTTTCATTTTTAGATAATAATGAGGACTAGAAAACTGGGCTTAGCTTTGAGATTTATAGCATTTTGGGTTCAAATCTCTGACTGAACCAAATTAATAAGCCTAATAGCTGAAATTTCATAACAAGATTAACAATTGAAGGACCTGGTAAATTAGTTCAAGGCAATTCATAATGGGTATTCTAGCTACTTTCTAATCAAGTTTTATTTAAACTCATCATTGTCAAGCAAGATTTGATTACCTAAACAATGATGTTTAGAACTAAAATTGAAGTTATGATACAAGCTGCTGTTTGCGTGTTTCCTTTCCAATTTTGAATGTAATGTCTTTCCTTTTAGCCTATTTTGCTTCATCAGACTATAGCCATTTTGTGATGAAGTCTTTTCTGTATTGGTGGAACTCTTAAGTGGTTAGTTGATGCCTGAATTTTGGGAAAGATATTTTGAGAGAAGAATGAGAGAATGGCCATCTAGAAACACAACATAATAGCTTATGTATGCCAATAAGATACAAGTAAAAGATTGAGCCATGAGAGTAAATAAAATCTGCACACTTCTCATTAATGAATTTCAGTCTAATAAATAGACTTAGATCATATTACAGTTACAAATAGAAGTTGAATTATAACAGATCAACCGAGCATAGCTCAAATGGTTAAGGCACCTATCTCTGACTTCTATTTGAGCATATGCTCGGTTTGCACAAATAATTCAACTTTTCCTTGTTTTTCTGTGCAATTTCAGACTCTATGCTACACTAATCACTAATTAATTTTCTTTTAGTAAGAAAAATGTGGAGTAGGGAGATTTGAACCTTCGACGTCAAGGGAATGAGTAAATGTCAATTATTGTTGATCAAATTTTAGGTTCATTACTTTTATTGTCTCTGTTTTCAAACTCCCAAATTTAACGTCTTAACAAACTTCTTTGATTCGTTCTTAAATACTACACTGAAGGTGTGGACCCTGCAGAGTAATGGCCCCAAAATTTCAAGAATTGTCAGAGAAATACCTCGATGTCGTCTTCTTAAAGCTTGATTGCAACCAAGACAATAAGGTTAGTTTCATCATCTGTACTCTTGCTGGAGCTTAGGAATGTATGTGCATAATTCATACAGGAGATCATACAAGAAAACTAGAGCTCTTTCTCTCATGGTGATTTATTTGGCAGCCATTGGCAAAGGAACTAGGCATAAAAGTGGTGCCGACTTTCAAAATTCTAAAGGATAATAAGGTTGTTAAAGAAGTAACAGGGGCAAAGTTTGATGATTTGGTCCATGCTATTGAAGCTGTAAGATCCAGCTGA

mRNA sequence

ATGGCTCTGCGTCTCTCTCTCTCCCCGCCGTCGATCAGATCCTCGCCGTCTCTGCCGTGCAACGGCAAGCAACCGATCGCCGCAGTTTCCGACTCAAAGAGCACCTGCTTCAGTTCAAGGAGCTTGAGTGTCACTAGTAGCCGGAGCATTGGTATTTCCGGTGGAAATCGGACCTTCAAGGTCAATTCCAGCTTGGAAACTGCCGGCGCTACCGTCGGCCAGGTCACCGAGGTCAACAAAGACACTTTCTGGCCCATCGTCAATGCGGCCGGCGATAAAACCGTTGTGCTCGATATGTACACCCAATGGTGTGGACCCTGCAGAGTAATGGCCCCAAAATTTCAAGAATTGTCAGAGAAATACCTCGATGTCGTCTTCTTAAAGCTTGATTGCAACCAAGACAATAAGCCATTGGCAAAGGAACTAGGCATAAAAGTGGTGCCGACTTTCAAAATTCTAAAGGATAATAAGGTTGTTAAAGAAGTAACAGGGGCAAAGTTTGATGATTTGGTCCATGCTATTGAAGCTGTAAGATCCAGCTGA

Coding sequence (CDS)

ATGGCTCTGCGTCTCTCTCTCTCCCCGCCGTCGATCAGATCCTCGCCGTCTCTGCCGTGCAACGGCAAGCAACCGATCGCCGCAGTTTCCGACTCAAAGAGCACCTGCTTCAGTTCAAGGAGCTTGAGTGTCACTAGTAGCCGGAGCATTGGTATTTCCGGTGGAAATCGGACCTTCAAGGTCAATTCCAGCTTGGAAACTGCCGGCGCTACCGTCGGCCAGGTCACCGAGGTCAACAAAGACACTTTCTGGCCCATCGTCAATGCGGCCGGCGATAAAACCGTTGTGCTCGATATGTACACCCAATGGTGTGGACCCTGCAGAGTAATGGCCCCAAAATTTCAAGAATTGTCAGAGAAATACCTCGATGTCGTCTTCTTAAAGCTTGATTGCAACCAAGACAATAAGCCATTGGCAAAGGAACTAGGCATAAAAGTGGTGCCGACTTTCAAAATTCTAAAGGATAATAAGGTTGTTAAAGAAGTAACAGGGGCAAAGTTTGATGATTTGGTCCATGCTATTGAAGCTGTAAGATCCAGCTGA

Protein sequence

MALRLSLSPPSIRSSPSLPCNGKQPIAAVSDSKSTCFSSRSLSVTSSRSIGISGGNRTFKVNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAVRSS

Homology

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BLAST of Moc06g14580 vs. NCBI nr
Match: XP_022157062.1 (thioredoxin F-type, chloroplastic-like [Momordica charantia])

HSP 1 Score: 352.1 bits (902), Expect = 2.9e-93
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MALRLSLSPPSIRSSPSLPCNGKQPIAAVSDSKSTCFSSRSLSVTSSRSIGISGGNRTFK 60
           MALRLSLSPPSIRSSPSLPCNGKQPIAAVSDSKSTCFSSRSLSVTSSRSIGISGGNRTFK
Sbjct: 1   MALRLSLSPPSIRSSPSLPCNGKQPIAAVSDSKSTCFSSRSLSVTSSRSIGISGGNRTFK 60

Query: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQELSEK 120
           VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQELSEK
Sbjct: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQELSEK 120

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAVRSS 180
           YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAVRSS
Sbjct: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAVRSS 180

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BLAST of Moc06g14580 vs. NCBI nr
Match: XP_008443649.1 (PREDICTED: thioredoxin F-type, chloroplastic-like [Cucumis melo])

HSP 1 Score: 325.5 bits (833), Expect = 2.9e-85
Identity = 162/180 (90.00%), Postives = 173/180 (96.11%), Query Frame = 0


Query: 1   MALRLSLSPPSIRSSPSLPCNGKQPIAAVSDSKSTCFSSRSLSVTSSRSIGISGGNRTFK 60
           MAL  SLSPPS+RSSPS PC+G+QPI A+SDSKS CFSSRSLSV+SSRSIG+SGGNR+FK
Sbjct: 1   MALHFSLSPPSVRSSPSFPCSGRQPIPALSDSKSGCFSSRSLSVSSSRSIGVSGGNRSFK 60

Query: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQELSEK 120
           VNSSLETAGATVG+VTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPC+VMAPKFQ+LSEK
Sbjct: 61  VNSSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK 120

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAVRSS 180
           YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKD KVVKEVTGAKFDDLVHAI+ VRSS
Sbjct: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS 180

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BLAST of Moc06g14580 vs. NCBI nr
Match: XP_038878300.1 (thioredoxin F-type, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 324.7 bits (831), Expect = 5.0e-85
Identity = 162/180 (90.00%), Postives = 173/180 (96.11%), Query Frame = 0


Query: 1   MALRLSLSPPSIRSSPSLPCNGKQPIAAVSDSKSTCFSSRSLSVTSSRSIGISGGNRTFK 60
           MAL LSLSPPS+RSSPS PC+G+Q IAA+SDSKS CFSS+SLS+TSSRSIG+S GNR+FK
Sbjct: 58  MALHLSLSPPSVRSSPSFPCSGRQSIAALSDSKSGCFSSKSLSITSSRSIGVSSGNRSFK 117

Query: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQELSEK 120
           VNSSLE AGATVG+VTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPC+VMAPKFQELSEK
Sbjct: 118 VNSSLEIAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEK 177

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAVRSS 180
           YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAI+ VRSS
Sbjct: 178 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIDTVRSS 237

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BLAST of Moc06g14580 vs. NCBI nr
Match: XP_022988428.1 (thioredoxin F-type, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 321.6 bits (823), Expect = 4.2e-84
Identity = 162/180 (90.00%), Postives = 173/180 (96.11%), Query Frame = 0


Query: 1   MALRLSLSPPSIRSSPSLPCNGKQPIAAVSDSKSTCFSSRSLSVTSSRSIGISGGNRTFK 60
           MALR+SLSPPSIRSSPSLPC+G+QPIAA+SD+KS CFSS+ LSVTSSRSIG+S GNR+FK
Sbjct: 1   MALRISLSPPSIRSSPSLPCSGRQPIAALSDAKSGCFSSKRLSVTSSRSIGVSSGNRSFK 60

Query: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQELSEK 120
           +NSSLETAGATVG VTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPC+VMAPKFQELSEK
Sbjct: 61  INSSLETAGATVGTVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEK 120

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAVRSS 180
           YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKD KVVK VTGAKFDDLV AI+AVRSS
Sbjct: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKVVTGAKFDDLVLAIDAVRSS 180

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BLAST of Moc06g14580 vs. NCBI nr
Match: XP_023516257.1 (thioredoxin F-type, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.2 bits (822), Expect = 5.5e-84
Identity = 163/180 (90.56%), Postives = 172/180 (95.56%), Query Frame = 0


Query: 1   MALRLSLSPPSIRSSPSLPCNGKQPIAAVSDSKSTCFSSRSLSVTSSRSIGISGGNRTFK 60
           MALR+SLSPPSIRSSPSLPC+G+QP AAVSD+KS CFSS+ LSVTSSRSIG+S GNR+FK
Sbjct: 1   MALRISLSPPSIRSSPSLPCSGRQPTAAVSDAKSGCFSSKRLSVTSSRSIGVSSGNRSFK 60

Query: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQELSEK 120
           VNSSLETAGATVG VTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPC+VMAPKFQELSEK
Sbjct: 61  VNSSLETAGATVGTVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEK 120

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAVRSS 180
           YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKD KVVK VTGAKFDDLV AI+AVRSS
Sbjct: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKVVTGAKFDDLVLAIDAVRSS 180

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BLAST of Moc06g14580 vs. ExPASy Swiss-Prot
Match: P29450 (Thioredoxin F-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 9.6e-55
Identity = 122/186 (65.59%), Postives = 143/186 (76.88%), Query Frame = 0


Query: 1   MALRLSLSPPSIRSSPSLPCNGKQPIAAVSDSKSTCFSSRSLSVTSSRSIGIS----GGN 60
           MAL L  SP  I ++     +  +P  A S S +T FSS   S+  S+ +G+       +
Sbjct: 1   MALNLCTSPKWIGTTVFDSASSSKPSLASSFS-TTSFSS---SILCSKRVGLQRLSLRRS 60

Query: 61  RTFKVNSSLETAG--ATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKF 120
            +  V SSLETAG   TVG+VTEVNKDTFWPIVNAAGDKTVVLDM+T+WCGPC+V+AP +
Sbjct: 61  ISVSVRSSLETAGPTVTVGKVTEVNKDTFWPIVNAAGDKTVVLDMFTKWCGPCKVIAPLY 120

Query: 121 QELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAI 180
           +ELS+KYLDVVFLKLDCNQDNK LAKELGIKVVPTFKILKDNK+VKEVTGAKFDDLV AI
Sbjct: 121 EELSQKYLDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDNKIVKEVTGAKFDDLVAAI 180

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BLAST of Moc06g14580 vs. ExPASy Swiss-Prot
Match: Q9XFH9 (Thioredoxin F2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g16400 PE=1 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 6.9e-53
Identity = 117/189 (61.90%), Postives = 136/189 (71.96%), Query Frame = 0


Query: 1   MALRLSLSPPSIRSSP--SLPCNGKQPI--------AAVSDSKSTCFSSRSLSVTSSRSI 60
           ++LRL+ SP S R SP  S    G  P+        + V+     C     + + S R I
Sbjct: 3   LSLRLAPSPTSFRYSPITSTGAGGFSPVKQHCRIPNSGVATKIGFCSGGGGV-LDSGRRI 62

Query: 61  GISGGNRTFKVNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVM 120
           G      +  V  SLET   TVGQVTEV+KDTFWPIV AAGDK VVLDMYTQWCGPC+V+
Sbjct: 63  G------SCVVRCSLETVNVTVGQVTEVDKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVI 122

Query: 121 APKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDL 180
           APK++ELSEKY D+VFLKLDCNQDNKPLAKELGI+VVPTFKILKDNKVVKEVTGAK++DL
Sbjct: 123 APKYKELSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFKILKDNKVVKEVTGAKYEDL 182

[Close]

BLAST of Moc06g14580 vs. ExPASy Swiss-Prot
Match: Q9XFH8 (Thioredoxin F1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g02730 PE=1 SV=2)

HSP 1 Score: 195.7 bits (496), Expect = 4.6e-49
Identity = 115/183 (62.84%), Postives = 128/183 (69.95%), Query Frame = 0


Query: 1   MALRLSLSPPSIRSSPSLPCNG---KQPIAAVSDSKSTCFSSRSLSVTSSRSIGISGGNR 60
           M L L LSP     SP+    G   KQ     S   +T     SL    SR  G S    
Sbjct: 1   MPLSLRLSPSPTALSPTTGGFGPSRKQCRIPYSGVPTTKIGFCSL---DSRKRGDSS--- 60

Query: 61  TFKVNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQEL 120
              V  SLET   +VGQVTEV+KDTFWPIV AAG+K VVLDMYTQWCGPC+V+APK++ L
Sbjct: 61  --VVRCSLETVNVSVGQVTEVDKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKAL 120

Query: 121 SEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAV 180
           SEKY DVVFLKLDCN DN+PLAKELGI+VVPTFKILKDNKVVKEVTGAK+DDLV AIE  
Sbjct: 121 SEKYDDVVFLKLDCNPDNRPLAKELGIRVVPTFKILKDNKVVKEVTGAKYDDLVAAIETA 175

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BLAST of Moc06g14580 vs. ExPASy Swiss-Prot
Match: O48897 (Thioredoxin F-type, chloroplastic OS=Brassica napus OX=3708 GN=TRXF PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.6e-49
Identity = 108/178 (60.67%), Postives = 130/178 (73.03%), Query Frame = 0


Query: 9   PPSIRSSPSLPCNGKQPIAAVSDSKSTC-FSSRSLSVTSSRSIGISGGNRTFK-----VN 68
           P S+R +PS P          S +K  C   S S   T++R IG+   +   +     V 
Sbjct: 2   PLSLRLAPS-PTALSPTTGGFSPAKKQCRIPSYSGVATTTRRIGLCSLDYVKRGDSSVVR 61

Query: 69  SSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQELSEKYL 128
            SL+T   +VGQVTEV+KDTFWPIV AAG+K VVLDMYTQWCGPC+V+APK++ LSEKY 
Sbjct: 62  CSLQTVNVSVGQVTEVDKDTFWPIVKAAGEKIVVLDMYTQWCGPCKVIAPKYKALSEKYE 121

Query: 129 DVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAVRSS 181
           DVVFLKLDCN +N+PLAKELGI+VVPTFKILKDN+VVKEVTGAK+DDLV AIE  RS+
Sbjct: 122 DVVFLKLDCNPENRPLAKELGIRVVPTFKILKDNQVVKEVTGAKYDDLVAAIETARSA 178

[Close]

BLAST of Moc06g14580 vs. ExPASy Swiss-Prot
Match: Q8S091 (Thioredoxin F, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0913000 PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.9e-48
Identity = 117/192 (60.94%), Postives = 130/192 (67.71%), Query Frame = 0


Query: 1   MALRLSL-------SPPSIRSSPSLPCNGKQPIAAVSDSKSTCFSSRSLSVTSSRSIGI- 60
           MALRLS+       S P+I +     C G+ P        S     RSL+V S       
Sbjct: 1   MALRLSVSSSHGPASSPAISTCRPAAC-GRFPALLGGGVAS---QRRSLTVVSGPETRAV 60

Query: 61  ----SGGNRTFKVNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCR 120
               S G+ T  V +  E A A  GQVTEVNKDTFWPIV +AG K VVLDMYTQWCGPC+
Sbjct: 61  IPVRSSGSDTATVGAEAE-AVAVTGQVTEVNKDTFWPIVKSAGPKVVVLDMYTQWCGPCK 120

Query: 121 VMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFD 180
           VMAPKFQE+SEK  DVVFLKLDCNQDNK LAKELGIKVVPTFKILKD KVVKEVTGAK D
Sbjct: 121 VMAPKFQEMSEKDQDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDGKVVKEVTGAKLD 180

[Close]

BLAST of Moc06g14580 vs. ExPASy TrEMBL
Match: A0A6J1DTK2 (thioredoxin F-type, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111023873 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.4e-93
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MALRLSLSPPSIRSSPSLPCNGKQPIAAVSDSKSTCFSSRSLSVTSSRSIGISGGNRTFK 60
           MALRLSLSPPSIRSSPSLPCNGKQPIAAVSDSKSTCFSSRSLSVTSSRSIGISGGNRTFK
Sbjct: 1   MALRLSLSPPSIRSSPSLPCNGKQPIAAVSDSKSTCFSSRSLSVTSSRSIGISGGNRTFK 60

Query: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQELSEK 120
           VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQELSEK
Sbjct: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQELSEK 120

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAVRSS 180
           YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAVRSS
Sbjct: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAVRSS 180

[Close]

BLAST of Moc06g14580 vs. ExPASy TrEMBL
Match: A0A1S3B9B3 (thioredoxin F-type, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487196 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.4e-85
Identity = 162/180 (90.00%), Postives = 173/180 (96.11%), Query Frame = 0


Query: 1   MALRLSLSPPSIRSSPSLPCNGKQPIAAVSDSKSTCFSSRSLSVTSSRSIGISGGNRTFK 60
           MAL  SLSPPS+RSSPS PC+G+QPI A+SDSKS CFSSRSLSV+SSRSIG+SGGNR+FK
Sbjct: 1   MALHFSLSPPSVRSSPSFPCSGRQPIPALSDSKSGCFSSRSLSVSSSRSIGVSGGNRSFK 60

Query: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQELSEK 120
           VNSSLETAGATVG+VTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPC+VMAPKFQ+LSEK
Sbjct: 61  VNSSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK 120

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAVRSS 180
           YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKD KVVKEVTGAKFDDLVHAI+ VRSS
Sbjct: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS 180

[Close]

BLAST of Moc06g14580 vs. ExPASy TrEMBL
Match: A0A6J1JM96 (thioredoxin F-type, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111485679 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.1e-84
Identity = 162/180 (90.00%), Postives = 173/180 (96.11%), Query Frame = 0


Query: 1   MALRLSLSPPSIRSSPSLPCNGKQPIAAVSDSKSTCFSSRSLSVTSSRSIGISGGNRTFK 60
           MALR+SLSPPSIRSSPSLPC+G+QPIAA+SD+KS CFSS+ LSVTSSRSIG+S GNR+FK
Sbjct: 1   MALRISLSPPSIRSSPSLPCSGRQPIAALSDAKSGCFSSKRLSVTSSRSIGVSSGNRSFK 60

Query: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQELSEK 120
           +NSSLETAGATVG VTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPC+VMAPKFQELSEK
Sbjct: 61  INSSLETAGATVGTVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEK 120

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAVRSS 180
           YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKD KVVK VTGAKFDDLV AI+AVRSS
Sbjct: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKVVTGAKFDDLVLAIDAVRSS 180

[Close]

BLAST of Moc06g14580 vs. ExPASy TrEMBL
Match: A0A6J1HAM5 (thioredoxin F-type, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111461638 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.3e-83
Identity = 160/180 (88.89%), Postives = 172/180 (95.56%), Query Frame = 0


Query: 1   MALRLSLSPPSIRSSPSLPCNGKQPIAAVSDSKSTCFSSRSLSVTSSRSIGISGGNRTFK 60
           MALR+SLSPPSIRSSPSLPC+G+QPIAA+ D+KS CFSS+ LSVTSSRSIG+S GNR+FK
Sbjct: 1   MALRISLSPPSIRSSPSLPCSGRQPIAALPDAKSGCFSSKRLSVTSSRSIGVSSGNRSFK 60

Query: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQELSEK 120
           +NSSLE AGATVG+VTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPC+VMAPKFQELSEK
Sbjct: 61  INSSLEIAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEK 120

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAVRSS 180
           YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKD KVVK VTGAKFDDLV AI+AVRSS
Sbjct: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKVVTGAKFDDLVLAIDAVRSS 180

[Close]

BLAST of Moc06g14580 vs. ExPASy TrEMBL
Match: A0A6J1IEI3 (thioredoxin F-type, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111472482 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.1e-82
Identity = 157/180 (87.22%), Postives = 171/180 (95.00%), Query Frame = 0


Query: 1   MALRLSLSPPSIRSSPSLPCNGKQPIAAVSDSKSTCFSSRSLSVTSSRSIGISGGNRTFK 60
           MALRL L+PPSIR S SLPCNGK PIA++SDSKS CFSS+SL+VTS RSIG+SGGNR+FK
Sbjct: 1   MALRLPLTPPSIRPSTSLPCNGKHPIASLSDSKSGCFSSKSLNVTSRRSIGVSGGNRSFK 60

Query: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQELSEK 120
           VNSSL+ AGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPC+VMAPKFQELSEK
Sbjct: 61  VNSSLDIAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEK 120

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAVRSS 180
           YLDV+FLKLDCNQDNKPLAKELGIKVVPTFKILK+  VVKEVTGAK+DDLVHAI+AVR+S
Sbjct: 121 YLDVIFLKLDCNQDNKPLAKELGIKVVPTFKILKNKMVVKEVTGAKYDDLVHAIDAVRTS 180

[Close]

BLAST of Moc06g14580 vs. TAIR 10
Match: AT5G16400.1 (thioredoxin F2 )

HSP 1 Score: 208.4 bits (529), Expect = 4.9e-54
Identity = 117/189 (61.90%), Postives = 136/189 (71.96%), Query Frame = 0


Query: 1   MALRLSLSPPSIRSSP--SLPCNGKQPI--------AAVSDSKSTCFSSRSLSVTSSRSI 60
           ++LRL+ SP S R SP  S    G  P+        + V+     C     + + S R I
Sbjct: 3   LSLRLAPSPTSFRYSPITSTGAGGFSPVKQHCRIPNSGVATKIGFCSGGGGV-LDSGRRI 62

Query: 61  GISGGNRTFKVNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVM 120
           G      +  V  SLET   TVGQVTEV+KDTFWPIV AAGDK VVLDMYTQWCGPC+V+
Sbjct: 63  G------SCVVRCSLETVNVTVGQVTEVDKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVI 122

Query: 121 APKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDL 180
           APK++ELSEKY D+VFLKLDCNQDNKPLAKELGI+VVPTFKILKDNKVVKEVTGAK++DL
Sbjct: 123 APKYKELSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFKILKDNKVVKEVTGAKYEDL 182

[Close]

BLAST of Moc06g14580 vs. TAIR 10
Match: AT3G02730.1 (thioredoxin F-type 1 )

HSP 1 Score: 195.7 bits (496), Expect = 3.3e-50
Identity = 115/183 (62.84%), Postives = 128/183 (69.95%), Query Frame = 0


Query: 1   MALRLSLSPPSIRSSPSLPCNG---KQPIAAVSDSKSTCFSSRSLSVTSSRSIGISGGNR 60
           M L L LSP     SP+    G   KQ     S   +T     SL    SR  G S    
Sbjct: 1   MPLSLRLSPSPTALSPTTGGFGPSRKQCRIPYSGVPTTKIGFCSL---DSRKRGDSS--- 60

Query: 61  TFKVNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQEL 120
              V  SLET   +VGQVTEV+KDTFWPIV AAG+K VVLDMYTQWCGPC+V+APK++ L
Sbjct: 61  --VVRCSLETVNVSVGQVTEVDKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKAL 120

Query: 121 SEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAV 180
           SEKY DVVFLKLDCN DN+PLAKELGI+VVPTFKILKDNKVVKEVTGAK+DDLV AIE  
Sbjct: 121 SEKYDDVVFLKLDCNPDNRPLAKELGIRVVPTFKILKDNKVVKEVTGAKYDDLVAAIETA 175

[Close]

BLAST of Moc06g14580 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 74.7 bits (182), Expect = 8.4e-14
Identity = 42/105 (40.00%), Postives = 62/105 (59.05%), Query Frame = 0


Query: 73  GQVTEVNKDTFW--PIVNAAGDKT-VVLDMYTQWCGPCRVMAPKFQELSEKYLDVVFLKL 132
           GQV   +    W   +  A   KT VV+D    WCGPCR +AP F +L++K  +V+FLK+
Sbjct: 6   GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKV 65

Query: 133 DCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAI 175
           D   + K +A +  I+ +PTF  LK+ K++ +V GAK D+L   I
Sbjct: 66  D-TDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTI 109

[Close]

BLAST of Moc06g14580 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 72.8 bits (177), Expect = 3.2e-13
Identity = 31/83 (37.35%), Postives = 56/83 (67.47%), Query Frame = 0


Query: 93  KTVVLDMYTQWCGPCRVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKI 152
           K +V+D    WC PCR +AP F +L++K+LDVVF K+D ++ N  +A+E  ++ +PTF  
Sbjct: 28  KLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDVDELN-TVAEEFKVQAMPTFIF 87

Query: 153 LKDNKVVKEVTGAKFDDLVHAIE 176
           +K+ ++ + V GA  ++++  +E
Sbjct: 88  MKEGEIKETVVGAAKEEIIANLE 109

[Close]

BLAST of Moc06g14580 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 71.2 bits (173), Expect = 9.3e-13
Identity = 31/88 (35.23%), Postives = 55/88 (62.50%), Query Frame = 0


Query: 92  DKTVVLDMYTQWCGPCRVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFK 151
           +K +V+D    WCGPCR++ P    +++K+ DV F+KLD + +   +AKE  +  +PTF 
Sbjct: 47  NKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDVD-ELPDVAKEFNVTAMPTFV 106

Query: 152 ILKDNKVVKEVTGAKFDDLVHAIEAVRS 180
           ++K  K ++ + GAK D+L   +  +R+
Sbjct: 107 LVKRGKEIERIIGAKKDELEKKVSKLRA 133

The following BLAST results are available for this feature:

BLAST of Moc06g14580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157062.1	2.9e-93	100.00	thioredoxin F-type, chloroplastic-like [Momordica charantia]	[more]
XP_008443649.1	2.9e-85	90.00	PREDICTED: thioredoxin F-type, chloroplastic-like [Cucumis melo]	[more]
XP_038878300.1	5.0e-85	90.00	thioredoxin F-type, chloroplastic-like [Benincasa hispida]	[more]
XP_022988428.1	4.2e-84	90.00	thioredoxin F-type, chloroplastic-like [Cucurbita maxima]	[more]
XP_023516257.1	5.5e-84	90.56	thioredoxin F-type, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Moc06g14580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29450	9.6e-55	65.59	Thioredoxin F-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
Q9XFH9	6.9e-53	61.90	Thioredoxin F2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g16400 PE=1 ...	[more]
Q9XFH8	4.6e-49	62.84	Thioredoxin F1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g02730 PE=1 ...	[more]
O48897	4.6e-49	60.67	Thioredoxin F-type, chloroplastic OS=Brassica napus OX=3708 GN=TRXF PE=2 SV=1	[more]
Q8S091	3.9e-48	60.94	Thioredoxin F, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g09...	[more]

BLAST of Moc06g14580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DTK2	1.4e-93	100.00	thioredoxin F-type, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A1S3B9B3	1.4e-85	90.00	thioredoxin F-type, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487196 P...	[more]
A0A6J1JM96	2.1e-84	90.00	thioredoxin F-type, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1114856...	[more]
A0A6J1HAM5	2.3e-83	88.89	thioredoxin F-type, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1IEI3	1.1e-82	87.22	thioredoxin F-type, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1114724...	[more]

BLAST of Moc06g14580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16400.1	4.9e-54	61.90	thioredoxin F2	[more]
AT3G02730.1	3.3e-50	62.84	thioredoxin F-type 1	[more]
AT3G51030.1	8.4e-14	40.00	thioredoxin H-type 1	[more]
AT5G42980.1	3.2e-13	37.35	thioredoxin 3	[more]
AT5G39950.1	9.3e-13	35.23	thioredoxin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 143..154 score: 33.89 coord: 103..112 score: 62.72 coord: 95..103 score: 31.23
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 59..179 e-value: 5.5E-36 score: 124.9
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..180
None	No IPR available	PANTHER	PTHR10438:SF382	THIOREDOXIN F2, CHLOROPLASTIC	coord: 1..180
None	No IPR available	CDD	cd02947	TRX_family	coord: 81..175 e-value: 7.00579E-27 score: 95.7028
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 75..175 e-value: 3.3E-23 score: 81.6
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 66..179 score: 12.859224
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 96..114
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 68..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g14580.1	Moc06g14580.1	mRNA