Moc06g13170 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g13170
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Locationchr6: 10309136 .. 10310704 (+)
RNA-Seq ExpressionMoc06g13170
SyntenyMoc06g13170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTGCCGAGCATTTCAAATAGCCTTGGAAGGCTCAGCGAGATTGTGGTACCGACAGTTGAAGCCCCGATCCATCGATAGTTATCAACAGTTGAGAAGGTTGTTCATCAACCAATTCTCAGCTCGGCAGTTGTTGAAGTTGTCGCCCTCTCACCTCGGAACAGTGAAGCAACGGGACAATGAGTCCCTGACGGAGTACATCGCTCGGTTCATGGACGAGCATGTCAAAGTGGTAAGTTATACCGACGACATCGCCATGATGTACTTCACCACGGGTTTGAACGACAGGAACTTGACGATAGAGTTCGGAAGCCGACCGCCGGCCTCCCTGAACGAGATGCTCGCTAGAGCTCGCCAGTACATCGACGACTTGGAGTTGTGGAAAGCCAATGGAGCTCGGCGAAGCAACCGTAGTAAAGATCGGGACCAAAAGTCCCCTCCTCCCAAGAAGCAGCGCAGCGATGGTTGGAGCTCGTCTTGGCGGGCCGACGACAGTAAGAGTAGAGGTCGTCGAGACGAGAAAGCCCCTTCAGACCGTCGAGGGCCGATGTTCGACAAGTTCACTCCGTTGAATGCCTCAATTGCGGAGATCTAAGCGTCGGCCGAAGACACCGACCTGGAGGCGCTTTTCGCAGCCCCGGAAAAGCTCCGCCGACCTCCAGGTAAACGAGACAAGCGGCTCTACTGCCGATTCCACAAGGACCATGGCCACGACACTTCACGCTGTTTCCAGTTGAACGAGCAGGTCGAGGATCTGATCCGGAGGGGTTATCTGAAAAAATACGTCGGCAGGCGTGAAAGGGCGGAGCCAGAGGGGTCGGCTCAGGAGGACAAGCGAGAGAAATCGCCCTCACCGAGACGGAAGGAAGATCGTCTCGCCGTCATAAATACCATCCATGGGGGCCCAAGTGGGGGACAGTCGGGGCAGAAGAGAAAAGCTCTGGCTCGGGAAGCAGCACACGAGGTCTGTACCTCGTACCCCAAGGAGTCTGTGATGCCGATCTTATTCGACGACCAAGACGGCGAAGGAGTGCACATGCCCCATAATGACGCCTTAGTAATCGCCCCACTCATAGATCACGTGAAGGTGAGAAGAGTTCTTATCGACGGTGGAGCGTCGGCCAACATCCTATCGTTCTCGACCTACACGGCCCTAGGGTGGGAGAAGAAGCACTTGAAGCTCAGCCCGACGCCTTTGGTCGGTTTTGCAGGGGAGTCAGTTAGCGCGGAAGGATGTGTCTCGCTCCGTGTTACCATTGGCGAGGGGGATCAACAAGTAACTAAAGTTGCAGAATTTGTCGTGATAGATCGGAGCTCAGCGTACAACGCCATAATTGGTCGGCCCTTGATTCATGATCTCAGGGCAGTTCCATCTACTTACCACCAAGTCTTGAAGTATCCCACCTCGGCCGGAATTGCGACAGTCCGGGGTGAGCATAAAATGTCCAGAGAATGCTACGCGGCCGCGATGAAGGGAACAATCACTTGTGCAGCGATCACGGGCGCGGCACGGCCGTGTGCCGACGAACCAGAGCCGAGCCATGGTACCCCAGCTGAAGAACTATGA

mRNA sequence

ATGAAGTGCCGAGCATTTCAAATAGCCTTGGAAGGCTCAGCGAGATTGTGGTACCGACAGTTGAAGCCCCGATCCATCGATAGTTATCAACAGTTGAGAAGGTTGTTCATCAACCAATTCTCAGCTCGGCAGTTGTTGAAGTTGTCGCCCTCTCACCTCGGAACAGTGAAGCAACGGGACAATGAGTCCCTGACGGAGTACATCGCTCGGTTCATGGACGAGCATGTCAAAGTGGTAAGTTATACCGACGACATCGCCATGATGTACTTCACCACGGGTTTGAACGACAGGAACTTGACGATAGAGTTCGGAAGCCGACCGCCGGCCTCCCTGAACGAGATGCTCGCTAGAGCTCGCCAGTACATCGACGACTTGGAGTTGTGGAAAGCCAATGGAGCTCGGCGAAGCAACCGTAGTAAAGATCGGGACCAAAAGTCCCCTCCTCCCAAGAAGCAGCGCAGCGATGGTTGGAGCTCGTCTTGGCGGGCCGACGACAGTAAGAGTAGAGGTCGTCGAGACGAGAAAGCCCCTTCAGACCACACCGACCTGGAGGCGCTTTTCGCAGCCCCGGAAAAGCTCCGCCGACCTCCAGGTAAACGAGACAAGCGGCTCTACTGCCGATTCCACAAGGACCATGGCCACGACACTTCACGCTGTTTCCAGTTGAACGAGCAGGTCGAGGATCTGATCCGGAGGGGTTATCTGAAAAAATACGTCGGCAGGCGTGAAAGGGCGGAGCCAGAGGGGTCGGCTCAGGAGGACAAGCGAGAGAAATCGCCCTCACCGAGACGGAAGGAAGATCGTCTCGCCGTCATAAATACCATCCATGGGGGCCCAAGTGGGGGACAGTCGGGGCAGAAGAGAAAAGCTCTGGCTCGGGAAGCAGCACACGAGGTCTGTACCTCGTACCCCAAGGAGTCTGTGATGCCGATCTTATTCGACGACCAAGACGGCGAAGGAGTGCACATGCCCCATAATGACGCCTTAGTAATCGCCCCACTCATAGATCACGTGAAGGTGAGAAGAGTTCTTATCGACGGTGGAGCGTCGGCCAACATCCTATCGTTCTCGACCTACACGGCCCTAGGGTGGGAGAAGAAGCACTTGAAGCTCAGCCCGACGCCTTTGGTCGGTTTTGCAGGGGAGTCAGTTAGCGCGGAAGGATGTGTCTCGCTCCGTGTTACCATTGGCGAGGGGGATCAACAAGTAACTAAAGTTGCAGAATTTGTCGTGATAGATCGGAGCTCAGCGTACAACGCCATAATTGGTCGGCCCTTGATTCATGATCTCAGGGCAGTTCCATCTACTTACCACCAAGTCTTGAAGTATCCCACCTCGGCCGGAATTGCGACAGTCCGGGGTGAGCATAAAATGTCCAGAGAATGCTACGCGGCCGCGATGAAGGGAACAATCACTTGTGCAGCGATCACGGGCGCGGCACGGCCGTGTGCCGACGAACCAGAGCCGAGCCATGGTACCCCAGCTGAAGAACTATGA

Coding sequence (CDS)

ATGAAGTGCCGAGCATTTCAAATAGCCTTGGAAGGCTCAGCGAGATTGTGGTACCGACAGTTGAAGCCCCGATCCATCGATAGTTATCAACAGTTGAGAAGGTTGTTCATCAACCAATTCTCAGCTCGGCAGTTGTTGAAGTTGTCGCCCTCTCACCTCGGAACAGTGAAGCAACGGGACAATGAGTCCCTGACGGAGTACATCGCTCGGTTCATGGACGAGCATGTCAAAGTGGTAAGTTATACCGACGACATCGCCATGATGTACTTCACCACGGGTTTGAACGACAGGAACTTGACGATAGAGTTCGGAAGCCGACCGCCGGCCTCCCTGAACGAGATGCTCGCTAGAGCTCGCCAGTACATCGACGACTTGGAGTTGTGGAAAGCCAATGGAGCTCGGCGAAGCAACCGTAGTAAAGATCGGGACCAAAAGTCCCCTCCTCCCAAGAAGCAGCGCAGCGATGGTTGGAGCTCGTCTTGGCGGGCCGACGACAGTAAGAGTAGAGGTCGTCGAGACGAGAAAGCCCCTTCAGACCACACCGACCTGGAGGCGCTTTTCGCAGCCCCGGAAAAGCTCCGCCGACCTCCAGGTAAACGAGACAAGCGGCTCTACTGCCGATTCCACAAGGACCATGGCCACGACACTTCACGCTGTTTCCAGTTGAACGAGCAGGTCGAGGATCTGATCCGGAGGGGTTATCTGAAAAAATACGTCGGCAGGCGTGAAAGGGCGGAGCCAGAGGGGTCGGCTCAGGAGGACAAGCGAGAGAAATCGCCCTCACCGAGACGGAAGGAAGATCGTCTCGCCGTCATAAATACCATCCATGGGGGCCCAAGTGGGGGACAGTCGGGGCAGAAGAGAAAAGCTCTGGCTCGGGAAGCAGCACACGAGGTCTGTACCTCGTACCCCAAGGAGTCTGTGATGCCGATCTTATTCGACGACCAAGACGGCGAAGGAGTGCACATGCCCCATAATGACGCCTTAGTAATCGCCCCACTCATAGATCACGTGAAGGTGAGAAGAGTTCTTATCGACGGTGGAGCGTCGGCCAACATCCTATCGTTCTCGACCTACACGGCCCTAGGGTGGGAGAAGAAGCACTTGAAGCTCAGCCCGACGCCTTTGGTCGGTTTTGCAGGGGAGTCAGTTAGCGCGGAAGGATGTGTCTCGCTCCGTGTTACCATTGGCGAGGGGGATCAACAAGTAACTAAAGTTGCAGAATTTGTCGTGATAGATCGGAGCTCAGCGTACAACGCCATAATTGGTCGGCCCTTGATTCATGATCTCAGGGCAGTTCCATCTACTTACCACCAAGTCTTGAAGTATCCCACCTCGGCCGGAATTGCGACAGTCCGGGGTGAGCATAAAATGTCCAGAGAATGCTACGCGGCCGCGATGAAGGGAACAATCACTTGTGCAGCGATCACGGGCGCGGCACGGCCGTGTGCCGACGAACCAGAGCCGAGCCATGGTACCCCAGCTGAAGAACTATGA

Protein sequence

MKCRAFQIALEGSARLWYRQLKPRSIDSYQQLRRLFINQFSARQLLKLSPSHLGTVKQRDNESLTEYIARFMDEHVKVVSYTDDIAMMYFTTGLNDRNLTIEFGSRPPASLNEMLARARQYIDDLELWKANGARRSNRSKDRDQKSPPPKKQRSDGWSSSWRADDSKSRGRRDEKAPSDHTDLEALFAAPEKLRRPPGKRDKRLYCRFHKDHGHDTSRCFQLNEQVEDLIRRGYLKKYVGRRERAEPEGSAQEDKREKSPSPRRKEDRLAVINTIHGGPSGGQSGQKRKALAREAAHEVCTSYPKESVMPILFDDQDGEGVHMPHNDALVIAPLIDHVKVRRVLIDGGASANILSFSTYTALGWEKKHLKLSPTPLVGFAGESVSAEGCVSLRVTIGEGDQQVTKVAEFVVIDRSSAYNAIIGRPLIHDLRAVPSTYHQVLKYPTSAGIATVRGEHKMSRECYAAAMKGTITCAAITGAARPCADEPEPSHGTPAEEL
Homology
BLAST of Moc06g13170 vs. NCBI nr
Match: XP_022158844.1 (uncharacterized protein LOC111025310 [Momordica charantia])

HSP 1 Score: 540.0 bits (1390), Expect = 2.1e-149
Identity = 283/371 (76.28%), Postives = 303/371 (81.67%), Query Frame = 0

Query: 72  MDEHVKVVSYTDDIAMMYFTTGLNDRNLTIEFGSRPPASLNEMLARARQYIDDLELWKAN 131
           MDEHVKVVS TDDIAMMYFTTGLNDRNLTIEF SRPPASLNEM ARARQYID LELWKAN
Sbjct: 1   MDEHVKVVSCTDDIAMMYFTTGLNDRNLTIEFRSRPPASLNEMFARARQYIDGLELWKAN 60

Query: 132 GARRSNRSKDRDQKSPPPKKQRSDGWSSSWRADDSKSRGRRDEKAPS------------- 191
           GARRS+R +DRD KSPP KK+  D  SSS RADD KSR RRDE+  S             
Sbjct: 61  GARRSSRGRDRDHKSPPSKKRCDDDRSSSRRADDDKSRSRRDERVTSNRRGPKFDKFTPL 120

Query: 192 -----------DHTDLEALFAAPEKLRRPPGKRDKRLYCRFHKDHGHDTSRCFQLNEQVE 251
                      + TD+E LFA+PEKLRRP GKR+KRLYCRFHKDHGHDTSRCF L EQVE
Sbjct: 121 NASIAEIYAVVEDTDMEVLFASPEKLRRPSGKRNKRLYCRFHKDHGHDTSRCFHLKEQVE 180

Query: 252 DLIRRGYLKKYVGRRERAEPEGSAQEDKREKSPSPRRKEDRLAVINTIHGGPSGGQSGQK 311
           DLIR GYLKKYVG RE+AE EGSA+E+KRE+S  PR KEDR AVINTIHGGPSG +SGQK
Sbjct: 181 DLIRIGYLKKYVGSREQAELEGSAREEKRERSQPPRPKEDRPAVINTIHGGPSGEKSGQK 240

Query: 312 RKALAREAAHEVCTSYPKESVMPILFDDQDGEGVHMPHNDALVIAPLIDHVKVRRVLIDG 371
           RKALARE AHEVCTSYPK  VMPILFD+QDGE VHMPHNDALVIAPLIDHVKVRRV +DG
Sbjct: 241 RKALAREVAHEVCTSYPKWPVMPILFDEQDGERVHMPHNDALVIAPLIDHVKVRRVFVDG 300

Query: 372 GASANILSFSTYTALGWEKKHLKLSPTPLVGFAGESVSAEGCVSLRVTIGEGDQQVTKVA 419
           GASANI SFSTYTALGWE++HLK   T LVGFA ESVS EGC+SL VTI EG+ QVT+VA
Sbjct: 301 GASANIFSFSTYTALGWERRHLKHKTTSLVGFARESVSTEGCISLPVTISEGEHQVTRVA 360

BLAST of Moc06g13170 vs. NCBI nr
Match: XP_022149029.1 (uncharacterized protein LOC111017548 [Momordica charantia])

HSP 1 Score: 442.2 bits (1136), Expect = 6.0e-120
Identity = 233/309 (75.40%), Postives = 255/309 (82.52%), Query Frame = 0

Query: 1   MKCRAFQIALEGSARLWYRQLKPRSIDSYQQLRRLFINQFSARQLLKLSPSHLGTVKQRD 60
           +KCRAFQIALEGS RLWY+QLKPRSIDSYQQLRRLFINQFSARQLLKL PSHL TVKQRD
Sbjct: 10  IKCRAFQIALEGSVRLWYQQLKPRSIDSYQQLRRLFINQFSARQLLKLPPSHLETVKQRD 69

Query: 61  NESLTEYIARFMDEHVKVVSYTDDIAMMYFTTGLNDRNLTIEFGSRPPASLNEMLARARQ 120
           NESLTEYIAR MDEHVKVVS TDDIAMMYFTTGLNDRNLTIEFGSRPPASLN+MLARARQ
Sbjct: 70  NESLTEYIARLMDEHVKVVSCTDDIAMMYFTTGLNDRNLTIEFGSRPPASLNKMLARARQ 129

Query: 121 YIDDLELWKANGARRSNRSKDRDQKSPPPKKQRSDGWSSSWRADDSKSRGRRDEKAPSD- 180
           YID LELWKA GARRS+R KDRDQ+S PPKK+ SD  SSS +A D +SRG+ DE+  SD 
Sbjct: 130 YIDGLELWKAKGARRSSRGKDRDQRSSPPKKRHSDDQSSSRQAVDDRSRGQCDERGSSDR 189

Query: 181 -----------------------HTDLEALFAAPEKLRRPPGKRDKRLYCRFHKDHGHDT 240
                                  +TD++ALF AP+KL RP GKRDKRLYCRFHKDHGH++
Sbjct: 190 WGPKFDKFTPLNASVAEIYATVENTDMKALFTAPKKLHRPSGKRDKRLYCRFHKDHGHNS 249

Query: 241 SRCFQLNEQVEDLIRRGYLKKYVGRRERAEPEGSAQEDKREKSPSPRRKEDRLAVINTIH 286
           SRCF L EQV+DLIRRGYLKKYVG RERA+PEGS +E+KRE+S  P RKEDR AVINTIH
Sbjct: 250 SRCFHLKEQVKDLIRRGYLKKYVGSRERAKPEGSTREEKRERSQPPGRKEDRPAVINTIH 309

BLAST of Moc06g13170 vs. NCBI nr
Match: XP_022152854.1 (uncharacterized protein LOC111020479 [Momordica charantia])

HSP 1 Score: 431.8 bits (1109), Expect = 8.0e-117
Identity = 243/495 (49.09%), Postives = 313/495 (63.23%), Query Frame = 0

Query: 1   MKCRAFQIALEGSARLWYRQLKPRSIDSYQQLRRLFINQFSARQLLKLSPSHLGTVKQRD 60
           +KC AFQIAL GSARLWYR+L  R I +Y QLR+ FI+QFS+R   + +P+HL T++Q++
Sbjct: 164 IKCCAFQIALTGSARLWYRRLPARLISTYSQLRKEFISQFSSRHYDRKTPTHLATIRQKE 223

Query: 61  NESLTEYIARFMDEHVKVVSYTDDIAMMYFTTGLNDRNLTIEFGSRPPASLNEMLARARQ 120
            E+L EY+ RF +E +KV   +DD AM YF TGL D  LT++     PA+  E+L + ++
Sbjct: 224 GETLREYVTRFPEEQLKVAHCSDDSAMCYFLTGLADETLTVKLREEAPATFAEVLQKTKK 283

Query: 121 YIDDLELWKANGAR---RSNRSKDRDQKSPPPKKQRSDG-WSSSWRADDSKSRGRRDEKA 180
            ID  EL +    R     ++ +    K     K R  G  SSS R D  +S    ++  
Sbjct: 284 VIDGQELLRTKTGRPEKNIDQGRAGKDKGKADSKSRDKGPSSSSSRVDYRRSNSSHNQSR 343

Query: 181 PSDH-----------------TDLEALFAAPEKLRRPPGKRDKRLYCRFHKDHGHDTSRC 240
           P +H                 T +E L   PEKLR  P KR+   YCRFH+DHGH+TS  
Sbjct: 344 PYEHYTPTTIPIFEILTNIEETGMEKLLKRPEKLRGDPEKRNTDKYCRFHRDHGHNTSNY 403

Query: 241 FQLNEQVEDLIRRGYLKKYVGRRERAEPEGSAQEDKREKSPSPRRKEDRLAVINTIHGGP 300
           ++L  Q+EDLI+ GY KK+VG+      E   ++++R++  +P R++DR AVIN      
Sbjct: 404 WELKRQIEDLIQDGYFKKFVGKPRSNSVE---KKEERKRLRTPPRRDDRPAVIN------ 463

Query: 301 SGGQSGQKRKALAREAAHEVCTSYPKESVMPILFDDQDGEGVHMPHNDALVIAPLIDHVK 360
                  K+K LAREA  EVC    +     I F+  D EGVH+PHNDALVIAPLID V 
Sbjct: 464 -------KKKELAREARREVCIIREQRPTSSIAFNHADLEGVHLPHNDALVIAPLIDLVL 523

Query: 361 VRRVLIDGGASANILSFSTYTALGWEKKHLKLSPTPLVGFAGESVSAEGCVSLRVTIGEG 420
           VRR+L+DGGASANILS STY ALGW +  LK SPTPLVGF+GES+S EGC+ L V+I + 
Sbjct: 524 VRRILVDGGASANILSLSTYLALGWTRSQLKKSPTPLVGFSGESISLEGCIDLPVSIRQD 583

Query: 421 DQQVTKVAEFVVIDRSSAYNAIIGRPLIHDLRAVPSTYHQVLKYPTSAGIATVRGEHKMS 475
           D QVT++AEFVVID  SAYNAI GRP+IH  RAVPST HQVLKY T  G+ TVRGE K S
Sbjct: 584 DTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTLNGVGTVRGELKTS 642

BLAST of Moc06g13170 vs. NCBI nr
Match: XP_022158414.1 (uncharacterized protein LOC111024904 [Momordica charantia])

HSP 1 Score: 392.1 bits (1006), Expect = 7.1e-105
Identity = 240/530 (45.28%), Postives = 304/530 (57.36%), Query Frame = 0

Query: 1   MKCRAFQIALEGSARLWYRQLKPRSIDSYQQLRRLFINQFSARQLLKLSPSHLGTVKQRD 60
           +KCRAFQIAL GSARLWYR+L  RSI +Y QLR+ FI+QFS+    + + +HL T++Q++
Sbjct: 10  IKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSWHYDRKTATHLATIRQKE 69

Query: 61  NESLTEYIARFMDEHVKVVSYTDDIAMMYFTTGLNDRNLTIEFGSRPPASLNEMLARARQ 120
            E+L EY+ RF +E +KV   +DD AM YF T L D  LT++ G   P +  E+L +A++
Sbjct: 70  RETLREYVTRFQEEQLKVAHCSDDSAMCYFLTSLADETLTVKLGEEAPTTFVEVLQKAKK 129

Query: 121 YIDDLELWKANGARRSNRSKDRDQKSPPPKKQRSDGWSSSWRADDSKSRG--RRDEKAPS 180
            ID  EL +    R     K  DQK    +K+++D  S    +  S SR   RR E  PS
Sbjct: 130 VIDGQELLRTKTGR---PEKQIDQKKLSQEKRKADSKSRDKGSSSSASRTEYRRLESGPS 189

Query: 181 ----------------------DHTDLEALFAAPEKLRRPPGKRDKRLYCRFHKDHGHDT 240
                                 + + +E L   PEKLR    KR+K  YCRFH+DHGH+T
Sbjct: 190 RSRPYERYTSSTIPISEILTNIEESGMEKLLKRPEKLRGDLEKRNKEKYCRFHRDHGHNT 249

Query: 241 SRCFQLNEQVEDLIRRGYLKKYVGRRERAEPEGSAQEDKREKSPSPRRKEDRLAVINTIH 300
           + C++L  Q+EDLI+ GY KK+VG+      E   ++++R++S +P R+EDR AVINTI 
Sbjct: 250 TSCWELKRQIEDLIQDGYFKKFVGKPRSNSVE---KKEERKRSRTPPRREDRPAVINTIF 309

Query: 301 GGPSGGQSGQKRKALAREAAHEVCTSYPKESVMPILFDDQDGEGVHMPHNDALVIAPLID 360
           GGP+GGQSG KRK LAREA  EVC     +    I F D D EGVH+PHNDALVIA LID
Sbjct: 310 GGPNGGQSGNKRKELAREARREVCIIREHKPTCSITFGDADLEGVHLPHNDALVIASLID 369

Query: 361 HVKVRRVLIDGGASANILSFSTYTALGWEKKHLKLSPTPLVGFAGESVSAEGCVSLRVTI 420
           H  VRRVLIDG                                        GC+ L VTI
Sbjct: 370 HDLVRRVLIDG----------------------------------------GCIDLPVTI 429

Query: 421 GEGDQQVTKVAEFVVIDRSSAYNAIIGRPLIHDLRAVPSTYHQVLKYPTSAGIATVRGEH 480
           G+   QVT++AEFVVID  SAYNAI GRP+IH  RAVPST HQVLKY T   +  VRGE 
Sbjct: 430 GQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNEVGMVRGEQ 489

Query: 481 KMSRECYAAAMKGTITCAAITGAARPCADEPE---PSHG-----TPAEEL 499
           K SRECYA+A+KG+  CA      R    E E   P  G      P EEL
Sbjct: 490 KTSRECYASALKGSAVCALEEQTNRGKLQESEADLPKEGKRQFPPPTEEL 493

BLAST of Moc06g13170 vs. NCBI nr
Match: XP_022152110.1 (uncharacterized protein LOC111019899 [Momordica charantia])

HSP 1 Score: 377.9 bits (969), Expect = 1.4e-100
Identity = 215/430 (50.00%), Postives = 272/430 (63.26%), Query Frame = 0

Query: 87  MMYFTTGLNDRNLTIEFGSRPPASLNEMLARARQYIDDLELWKAN-GARRSNRSKDRDQK 146
           M YF TGL D  LT++     PA+  E+L +A++ ID  EL +   G  RS +  +    
Sbjct: 1   MCYFLTGLADEALTVKLVEEAPATFAEVLQKAKKVIDGQELLRTKIGQGRSGKDMENTDP 60

Query: 147 SPPPKKQRSDGWSSSWRADDSKSRGRRDEK-APS-----------DHTDLEALFAAPEKL 206
               K   S+G +   RA++  +R R  E+  P+           + + +E L   PEKL
Sbjct: 61  KSKDKGSFSNGRAEYRRAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKL 120

Query: 207 RRPPGKRDKRLYCRFHKDHGHDTSRCFQLNEQVEDLIRRGYLKKYVGRRERAEPEGSAQE 266
           R  P +R K  YCRFH++HGH+TS  ++L  Q+EDLI+ GY KK+VG+   +  E   ++
Sbjct: 121 RGAPERRSKDKYCRFHREHGHNTSDYWELKSQIEDLIQDGYFKKFVGKPRTSSAE---KK 180

Query: 267 DKREKSPSPRRKEDRLAVINTIHGGPSGGQSGQKRKALAREAAHEVCTSYPKESVMPILF 326
           ++R++S +P R+ DR AVINTI GGPSGGQSG KRK LAR A  EVC    +    PI F
Sbjct: 181 EERKRSRTPPRRTDRPAVINTIFGGPSGGQSGHKRKKLARAARREVCIIREQRPTCPITF 240

Query: 327 DDQDGEGVHMPHNDALVIAPLIDHVKVRRVLIDGGASANILSFSTYTALGWEKKHLKLSP 386
           D  D   VH+PHNDALVIAPLIDHV VRRVL+DGGASANILS  TY ALGW +  LK SP
Sbjct: 241 DXADLXEVHLPHNDALVIAPLIDHVVVRRVLVDGGASANILSLPTYLALGWTRSQLKKSP 300

Query: 387 TPLVGFAGESVSAEGCVSLRVTIGEGDQQVTKVAEFVVIDRSSAYNAIIGRPLIHDLRAV 446
           TPLVGF+GESV  EGC+ L VT+G+   +VT++AEFVV+D  SAYNAI GRP+IH  RA+
Sbjct: 301 TPLVGFSGESVVPEGCIDLPVTLGQDQTRVTQMAEFVVVDGRSAYNAIFGRPIIHSFRAI 360

Query: 447 PSTYHQVLKYPTSAGIATVRGEHKMSRECYAAAMKGTITCAAITGAARPC-----ADEPE 499
           PST HQVLKY T  G+ TVRGE   SRECYA+ +KGT  CA  T  +R       AD P 
Sbjct: 361 PSTLHQVLKYSTPNGVGTVRGEQTASRECYASXLKGTSVCALETLTSRDGTLEFEADLPX 420

BLAST of Moc06g13170 vs. ExPASy TrEMBL
Match: A0A6J1E0L8 (uncharacterized protein LOC111025310 OS=Momordica charantia OX=3673 GN=LOC111025310 PE=4 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 1.0e-149
Identity = 283/371 (76.28%), Postives = 303/371 (81.67%), Query Frame = 0

Query: 72  MDEHVKVVSYTDDIAMMYFTTGLNDRNLTIEFGSRPPASLNEMLARARQYIDDLELWKAN 131
           MDEHVKVVS TDDIAMMYFTTGLNDRNLTIEF SRPPASLNEM ARARQYID LELWKAN
Sbjct: 1   MDEHVKVVSCTDDIAMMYFTTGLNDRNLTIEFRSRPPASLNEMFARARQYIDGLELWKAN 60

Query: 132 GARRSNRSKDRDQKSPPPKKQRSDGWSSSWRADDSKSRGRRDEKAPS------------- 191
           GARRS+R +DRD KSPP KK+  D  SSS RADD KSR RRDE+  S             
Sbjct: 61  GARRSSRGRDRDHKSPPSKKRCDDDRSSSRRADDDKSRSRRDERVTSNRRGPKFDKFTPL 120

Query: 192 -----------DHTDLEALFAAPEKLRRPPGKRDKRLYCRFHKDHGHDTSRCFQLNEQVE 251
                      + TD+E LFA+PEKLRRP GKR+KRLYCRFHKDHGHDTSRCF L EQVE
Sbjct: 121 NASIAEIYAVVEDTDMEVLFASPEKLRRPSGKRNKRLYCRFHKDHGHDTSRCFHLKEQVE 180

Query: 252 DLIRRGYLKKYVGRRERAEPEGSAQEDKREKSPSPRRKEDRLAVINTIHGGPSGGQSGQK 311
           DLIR GYLKKYVG RE+AE EGSA+E+KRE+S  PR KEDR AVINTIHGGPSG +SGQK
Sbjct: 181 DLIRIGYLKKYVGSREQAELEGSAREEKRERSQPPRPKEDRPAVINTIHGGPSGEKSGQK 240

Query: 312 RKALAREAAHEVCTSYPKESVMPILFDDQDGEGVHMPHNDALVIAPLIDHVKVRRVLIDG 371
           RKALARE AHEVCTSYPK  VMPILFD+QDGE VHMPHNDALVIAPLIDHVKVRRV +DG
Sbjct: 241 RKALAREVAHEVCTSYPKWPVMPILFDEQDGERVHMPHNDALVIAPLIDHVKVRRVFVDG 300

Query: 372 GASANILSFSTYTALGWEKKHLKLSPTPLVGFAGESVSAEGCVSLRVTIGEGDQQVTKVA 419
           GASANI SFSTYTALGWE++HLK   T LVGFA ESVS EGC+SL VTI EG+ QVT+VA
Sbjct: 301 GASANIFSFSTYTALGWERRHLKHKTTSLVGFARESVSTEGCISLPVTISEGEHQVTRVA 360

BLAST of Moc06g13170 vs. ExPASy TrEMBL
Match: A0A6J1D5T3 (uncharacterized protein LOC111017548 OS=Momordica charantia OX=3673 GN=LOC111017548 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 2.9e-120
Identity = 233/309 (75.40%), Postives = 255/309 (82.52%), Query Frame = 0

Query: 1   MKCRAFQIALEGSARLWYRQLKPRSIDSYQQLRRLFINQFSARQLLKLSPSHLGTVKQRD 60
           +KCRAFQIALEGS RLWY+QLKPRSIDSYQQLRRLFINQFSARQLLKL PSHL TVKQRD
Sbjct: 10  IKCRAFQIALEGSVRLWYQQLKPRSIDSYQQLRRLFINQFSARQLLKLPPSHLETVKQRD 69

Query: 61  NESLTEYIARFMDEHVKVVSYTDDIAMMYFTTGLNDRNLTIEFGSRPPASLNEMLARARQ 120
           NESLTEYIAR MDEHVKVVS TDDIAMMYFTTGLNDRNLTIEFGSRPPASLN+MLARARQ
Sbjct: 70  NESLTEYIARLMDEHVKVVSCTDDIAMMYFTTGLNDRNLTIEFGSRPPASLNKMLARARQ 129

Query: 121 YIDDLELWKANGARRSNRSKDRDQKSPPPKKQRSDGWSSSWRADDSKSRGRRDEKAPSD- 180
           YID LELWKA GARRS+R KDRDQ+S PPKK+ SD  SSS +A D +SRG+ DE+  SD 
Sbjct: 130 YIDGLELWKAKGARRSSRGKDRDQRSSPPKKRHSDDQSSSRQAVDDRSRGQCDERGSSDR 189

Query: 181 -----------------------HTDLEALFAAPEKLRRPPGKRDKRLYCRFHKDHGHDT 240
                                  +TD++ALF AP+KL RP GKRDKRLYCRFHKDHGH++
Sbjct: 190 WGPKFDKFTPLNASVAEIYATVENTDMKALFTAPKKLHRPSGKRDKRLYCRFHKDHGHNS 249

Query: 241 SRCFQLNEQVEDLIRRGYLKKYVGRRERAEPEGSAQEDKREKSPSPRRKEDRLAVINTIH 286
           SRCF L EQV+DLIRRGYLKKYVG RERA+PEGS +E+KRE+S  P RKEDR AVINTIH
Sbjct: 250 SRCFHLKEQVKDLIRRGYLKKYVGSRERAKPEGSTREEKRERSQPPGRKEDRPAVINTIH 309

BLAST of Moc06g13170 vs. ExPASy TrEMBL
Match: A0A6J1DHB3 (uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020479 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 3.9e-117
Identity = 243/495 (49.09%), Postives = 313/495 (63.23%), Query Frame = 0

Query: 1   MKCRAFQIALEGSARLWYRQLKPRSIDSYQQLRRLFINQFSARQLLKLSPSHLGTVKQRD 60
           +KC AFQIAL GSARLWYR+L  R I +Y QLR+ FI+QFS+R   + +P+HL T++Q++
Sbjct: 164 IKCCAFQIALTGSARLWYRRLPARLISTYSQLRKEFISQFSSRHYDRKTPTHLATIRQKE 223

Query: 61  NESLTEYIARFMDEHVKVVSYTDDIAMMYFTTGLNDRNLTIEFGSRPPASLNEMLARARQ 120
            E+L EY+ RF +E +KV   +DD AM YF TGL D  LT++     PA+  E+L + ++
Sbjct: 224 GETLREYVTRFPEEQLKVAHCSDDSAMCYFLTGLADETLTVKLREEAPATFAEVLQKTKK 283

Query: 121 YIDDLELWKANGAR---RSNRSKDRDQKSPPPKKQRSDG-WSSSWRADDSKSRGRRDEKA 180
            ID  EL +    R     ++ +    K     K R  G  SSS R D  +S    ++  
Sbjct: 284 VIDGQELLRTKTGRPEKNIDQGRAGKDKGKADSKSRDKGPSSSSSRVDYRRSNSSHNQSR 343

Query: 181 PSDH-----------------TDLEALFAAPEKLRRPPGKRDKRLYCRFHKDHGHDTSRC 240
           P +H                 T +E L   PEKLR  P KR+   YCRFH+DHGH+TS  
Sbjct: 344 PYEHYTPTTIPIFEILTNIEETGMEKLLKRPEKLRGDPEKRNTDKYCRFHRDHGHNTSNY 403

Query: 241 FQLNEQVEDLIRRGYLKKYVGRRERAEPEGSAQEDKREKSPSPRRKEDRLAVINTIHGGP 300
           ++L  Q+EDLI+ GY KK+VG+      E   ++++R++  +P R++DR AVIN      
Sbjct: 404 WELKRQIEDLIQDGYFKKFVGKPRSNSVE---KKEERKRLRTPPRRDDRPAVIN------ 463

Query: 301 SGGQSGQKRKALAREAAHEVCTSYPKESVMPILFDDQDGEGVHMPHNDALVIAPLIDHVK 360
                  K+K LAREA  EVC    +     I F+  D EGVH+PHNDALVIAPLID V 
Sbjct: 464 -------KKKELAREARREVCIIREQRPTSSIAFNHADLEGVHLPHNDALVIAPLIDLVL 523

Query: 361 VRRVLIDGGASANILSFSTYTALGWEKKHLKLSPTPLVGFAGESVSAEGCVSLRVTIGEG 420
           VRR+L+DGGASANILS STY ALGW +  LK SPTPLVGF+GES+S EGC+ L V+I + 
Sbjct: 524 VRRILVDGGASANILSLSTYLALGWTRSQLKKSPTPLVGFSGESISLEGCIDLPVSIRQD 583

Query: 421 DQQVTKVAEFVVIDRSSAYNAIIGRPLIHDLRAVPSTYHQVLKYPTSAGIATVRGEHKMS 475
           D QVT++AEFVVID  SAYNAI GRP+IH  RAVPST HQVLKY T  G+ TVRGE K S
Sbjct: 584 DTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTLNGVGTVRGELKTS 642

BLAST of Moc06g13170 vs. ExPASy TrEMBL
Match: A0A6J1DZB9 (uncharacterized protein LOC111024904 OS=Momordica charantia OX=3673 GN=LOC111024904 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 3.4e-105
Identity = 240/530 (45.28%), Postives = 304/530 (57.36%), Query Frame = 0

Query: 1   MKCRAFQIALEGSARLWYRQLKPRSIDSYQQLRRLFINQFSARQLLKLSPSHLGTVKQRD 60
           +KCRAFQIAL GSARLWYR+L  RSI +Y QLR+ FI+QFS+    + + +HL T++Q++
Sbjct: 10  IKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSWHYDRKTATHLATIRQKE 69

Query: 61  NESLTEYIARFMDEHVKVVSYTDDIAMMYFTTGLNDRNLTIEFGSRPPASLNEMLARARQ 120
            E+L EY+ RF +E +KV   +DD AM YF T L D  LT++ G   P +  E+L +A++
Sbjct: 70  RETLREYVTRFQEEQLKVAHCSDDSAMCYFLTSLADETLTVKLGEEAPTTFVEVLQKAKK 129

Query: 121 YIDDLELWKANGARRSNRSKDRDQKSPPPKKQRSDGWSSSWRADDSKSRG--RRDEKAPS 180
            ID  EL +    R     K  DQK    +K+++D  S    +  S SR   RR E  PS
Sbjct: 130 VIDGQELLRTKTGR---PEKQIDQKKLSQEKRKADSKSRDKGSSSSASRTEYRRLESGPS 189

Query: 181 ----------------------DHTDLEALFAAPEKLRRPPGKRDKRLYCRFHKDHGHDT 240
                                 + + +E L   PEKLR    KR+K  YCRFH+DHGH+T
Sbjct: 190 RSRPYERYTSSTIPISEILTNIEESGMEKLLKRPEKLRGDLEKRNKEKYCRFHRDHGHNT 249

Query: 241 SRCFQLNEQVEDLIRRGYLKKYVGRRERAEPEGSAQEDKREKSPSPRRKEDRLAVINTIH 300
           + C++L  Q+EDLI+ GY KK+VG+      E   ++++R++S +P R+EDR AVINTI 
Sbjct: 250 TSCWELKRQIEDLIQDGYFKKFVGKPRSNSVE---KKEERKRSRTPPRREDRPAVINTIF 309

Query: 301 GGPSGGQSGQKRKALAREAAHEVCTSYPKESVMPILFDDQDGEGVHMPHNDALVIAPLID 360
           GGP+GGQSG KRK LAREA  EVC     +    I F D D EGVH+PHNDALVIA LID
Sbjct: 310 GGPNGGQSGNKRKELAREARREVCIIREHKPTCSITFGDADLEGVHLPHNDALVIASLID 369

Query: 361 HVKVRRVLIDGGASANILSFSTYTALGWEKKHLKLSPTPLVGFAGESVSAEGCVSLRVTI 420
           H  VRRVLIDG                                        GC+ L VTI
Sbjct: 370 HDLVRRVLIDG----------------------------------------GCIDLPVTI 429

Query: 421 GEGDQQVTKVAEFVVIDRSSAYNAIIGRPLIHDLRAVPSTYHQVLKYPTSAGIATVRGEH 480
           G+   QVT++AEFVVID  SAYNAI GRP+IH  RAVPST HQVLKY T   +  VRGE 
Sbjct: 430 GQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNEVGMVRGEQ 489

Query: 481 KMSRECYAAAMKGTITCAAITGAARPCADEPE---PSHG-----TPAEEL 499
           K SRECYA+A+KG+  CA      R    E E   P  G      P EEL
Sbjct: 490 KTSRECYASALKGSAVCALEEQTNRGKLQESEADLPKEGKRQFPPPTEEL 493

BLAST of Moc06g13170 vs. ExPASy TrEMBL
Match: A0A6J1DD03 (uncharacterized protein LOC111019899 OS=Momordica charantia OX=3673 GN=LOC111019899 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 6.7e-101
Identity = 215/430 (50.00%), Postives = 272/430 (63.26%), Query Frame = 0

Query: 87  MMYFTTGLNDRNLTIEFGSRPPASLNEMLARARQYIDDLELWKAN-GARRSNRSKDRDQK 146
           M YF TGL D  LT++     PA+  E+L +A++ ID  EL +   G  RS +  +    
Sbjct: 1   MCYFLTGLADEALTVKLVEEAPATFAEVLQKAKKVIDGQELLRTKIGQGRSGKDMENTDP 60

Query: 147 SPPPKKQRSDGWSSSWRADDSKSRGRRDEK-APS-----------DHTDLEALFAAPEKL 206
               K   S+G +   RA++  +R R  E+  P+           + + +E L   PEKL
Sbjct: 61  KSKDKGSFSNGRAEYRRAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKL 120

Query: 207 RRPPGKRDKRLYCRFHKDHGHDTSRCFQLNEQVEDLIRRGYLKKYVGRRERAEPEGSAQE 266
           R  P +R K  YCRFH++HGH+TS  ++L  Q+EDLI+ GY KK+VG+   +  E   ++
Sbjct: 121 RGAPERRSKDKYCRFHREHGHNTSDYWELKSQIEDLIQDGYFKKFVGKPRTSSAE---KK 180

Query: 267 DKREKSPSPRRKEDRLAVINTIHGGPSGGQSGQKRKALAREAAHEVCTSYPKESVMPILF 326
           ++R++S +P R+ DR AVINTI GGPSGGQSG KRK LAR A  EVC    +    PI F
Sbjct: 181 EERKRSRTPPRRTDRPAVINTIFGGPSGGQSGHKRKKLARAARREVCIIREQRPTCPITF 240

Query: 327 DDQDGEGVHMPHNDALVIAPLIDHVKVRRVLIDGGASANILSFSTYTALGWEKKHLKLSP 386
           D  D   VH+PHNDALVIAPLIDHV VRRVL+DGGASANILS  TY ALGW +  LK SP
Sbjct: 241 DXADLXEVHLPHNDALVIAPLIDHVVVRRVLVDGGASANILSLPTYLALGWTRSQLKKSP 300

Query: 387 TPLVGFAGESVSAEGCVSLRVTIGEGDQQVTKVAEFVVIDRSSAYNAIIGRPLIHDLRAV 446
           TPLVGF+GESV  EGC+ L VT+G+   +VT++AEFVV+D  SAYNAI GRP+IH  RA+
Sbjct: 301 TPLVGFSGESVVPEGCIDLPVTLGQDQTRVTQMAEFVVVDGRSAYNAIFGRPIIHSFRAI 360

Query: 447 PSTYHQVLKYPTSAGIATVRGEHKMSRECYAAAMKGTITCAAITGAARPC-----ADEPE 499
           PST HQVLKY T  G+ TVRGE   SRECYA+ +KGT  CA  T  +R       AD P 
Sbjct: 361 PSTLHQVLKYSTPNGVGTVRGEQTASRECYASXLKGTSVCALETLTSRDGTLEFEADLPX 420

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022158844.12.1e-14976.28uncharacterized protein LOC111025310 [Momordica charantia][more]
XP_022149029.16.0e-12075.40uncharacterized protein LOC111017548 [Momordica charantia][more]
XP_022152854.18.0e-11749.09uncharacterized protein LOC111020479 [Momordica charantia][more]
XP_022158414.17.1e-10545.28uncharacterized protein LOC111024904 [Momordica charantia][more]
XP_022152110.11.4e-10050.00uncharacterized protein LOC111019899 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1E0L81.0e-14976.28uncharacterized protein LOC111025310 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1D5T32.9e-12075.40uncharacterized protein LOC111017548 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A6J1DHB33.9e-11749.09uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A6J1DZB93.4e-10545.28uncharacterized protein LOC111024904 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1DD036.7e-10150.00uncharacterized protein LOC111019899 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 322..447
e-value: 9.7E-9
score: 37.0
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 6..96
e-value: 2.5E-13
score: 50.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..199
NoneNo IPR availablePANTHERPTHR33240OS08G0508500 PROTEINcoord: 336..457
NoneNo IPR availablePANTHERPTHR33240:SF7GAG-PRO-LIKE PROTEINcoord: 336..457
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 335..428
e-value: 2.85788E-14
score: 66.206

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g13170.1Moc06g13170.1mRNA