Moc06g07010 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g07010
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Amino-acid racemase isoform 2
Location	chr6: 5080808 .. 5081947 (+)
RNA-Seq Expression	Moc06g07010
Synteny	Moc06g07010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGATGGAGGGATGGCCATGCCCTTATATACACTGAATTCCCCAGCACCTATTCGAGGAAATGCCAACAAGACCACTACTAGCTTTAGGAGGAGATTAGACCTGTATTCAGCTGTACGGATTTCCTCTGTTCTTCAAACTGATGAGAACGACAACTTACCAGCATCCAAGAAGATATCAAGTACAGGAAAATCGCTGTCAAGAAGTCGAACCCCCAGACCCCTCCTTGGCCCGCCAAATACTGTGGGTGTCATAGGAGGAGTCTCGGTCTTTTCTACTCTACTTTTTCTTGGAAAAGCTCGTCTGGTGGAGTTTTAAGGATGGACAAGAGAGCATACCTTTTGTAGTCTGCAGTGATTCTACATTAGACAAAGGGCTTCCCCCTCTTACTTCATTGAGTACATTCAGCACAAATTCTTCTCAACATGGCCATAATGATGCTCCGATAATCGAGAATTTCAAGCGGAAAAGGGTGTTTCTTGAGCAGTCCGGAGCTCAGTGCCTAATCACGCCTTGCCACATTTCACATAGGTGGCTTAATGACAAATCTGAGAGCTGCAGATTACCTTTCATTCATGTGGGAGATTGTGTTGCTAGGGAGCTGAAAGAGGCTAATCTTAAGCCACTTGAGGCAGGGAGCAATGTCCGGATTGGGTTGCTTGCCACTGATACATCAACAGCAGCTAATTTTTACAATGAGAGGCTACAGAATCAGGTTTTGCAAATACATTCGTAGCTAATGGATGCAGTTGACATGATTGAAGGGAATTTTTCTACACTACTTAGTAGATTCTAGAATTTTCTTCTAATTTCATTTTTTTTCTTCTGTCATGTTGAATGTATCAGGGCTTTGATGTTGTCTTGCCGGATGAAGCAACCATGGACCATATAGTAGTTCCTGCAGTTGAAGCTTTGAACAAAAGGGATCTGGAAGGAGCAAGAAATCTGTTGAGAATTGCTGTCCATGTTCTCCTGGTAAGGGCTGCGAACATGGTAATACTTGTTTCTGACGAATTTCTTAATCTTCTTCCTCCTGATGACCCTCTTCTGAAAAAATGTATTGATCCCATGGATGCATTAGCCAGGGCAGCCATTAAATGGTCTAGATCTACAGACAATTTACATGAGAGAACTTAG

mRNA sequence

ATGCTTGATGGAGGGATGGCCATGCCCTTATATACACTGAATTCCCCAGCACCTATTCGAGGAAATGCCAACAAGACCACTACTAGCTTTAGGAGGAGATTAGACCTGTATTCAGCTGTACGGATTTCCTCTGTTCTTCAAACTGATGAGAACGACAACTTACCAGCATCCAAGAAGATATCAAGTACAGGAAAATCGCTGTCAAGAAGTCGAACCCCCAGACCCCTCCTTGGCCCGCCAAATACTGATGGACAAGAGAGCATACCTTTTGTAGTCTGCAGTGATTCTACATTAGACAAAGGGCTTCCCCCTCTTACTTCATTGAGTACATTCAGCACAAATTCTTCTCAACATGGCCATAATGATGCTCCGATAATCGAGAATTTCAAGCGGAAAAGGGTGTTTCTTGAGCAGTCCGGAGCTCAGTGCCTAATCACGCCTTGCCACATTTCACATAGGTGGCTTAATGACAAATCTGAGAGCTGCAGATTACCTTTCATTCATGTGGGAGATTGTGTTGCTAGGGAGCTGAAAGAGGCTAATCTTAAGCCACTTGAGGCAGGGAGCAATGTCCGGATTGGGTTGCTTGCCACTGATACATCAACAGCAGCTAATTTTTACAATGAGAGGCTACAGAATCAGGGCTTTGATGTTGTCTTGCCGGATGAAGCAACCATGGACCATATAGTAGTTCCTGCAGTTGAAGCTTTGAACAAAAGGGATCTGGAAGGAGCAAGAAATCTGTTGAGAATTGCTGTCCATGTTCTCCTGGTAAGGGCTGCGAACATGGTAATACTTGTTTCTGACGAATTTCTTAATCTTCTTCCTCCTGATGACCCTCTTCTGAAAAAATGTATTGATCCCATGGATGCATTAGCCAGGGCAGCCATTAAATGGTCTAGATCTACAGACAATTTACATGAGAGAACTTAG

Coding sequence (CDS)

ATGCTTGATGGAGGGATGGCCATGCCCTTATATACACTGAATTCCCCAGCACCTATTCGAGGAAATGCCAACAAGACCACTACTAGCTTTAGGAGGAGATTAGACCTGTATTCAGCTGTACGGATTTCCTCTGTTCTTCAAACTGATGAGAACGACAACTTACCAGCATCCAAGAAGATATCAAGTACAGGAAAATCGCTGTCAAGAAGTCGAACCCCCAGACCCCTCCTTGGCCCGCCAAATACTGATGGACAAGAGAGCATACCTTTTGTAGTCTGCAGTGATTCTACATTAGACAAAGGGCTTCCCCCTCTTACTTCATTGAGTACATTCAGCACAAATTCTTCTCAACATGGCCATAATGATGCTCCGATAATCGAGAATTTCAAGCGGAAAAGGGTGTTTCTTGAGCAGTCCGGAGCTCAGTGCCTAATCACGCCTTGCCACATTTCACATAGGTGGCTTAATGACAAATCTGAGAGCTGCAGATTACCTTTCATTCATGTGGGAGATTGTGTTGCTAGGGAGCTGAAAGAGGCTAATCTTAAGCCACTTGAGGCAGGGAGCAATGTCCGGATTGGGTTGCTTGCCACTGATACATCAACAGCAGCTAATTTTTACAATGAGAGGCTACAGAATCAGGGCTTTGATGTTGTCTTGCCGGATGAAGCAACCATGGACCATATAGTAGTTCCTGCAGTTGAAGCTTTGAACAAAAGGGATCTGGAAGGAGCAAGAAATCTGTTGAGAATTGCTGTCCATGTTCTCCTGGTAAGGGCTGCGAACATGGTAATACTTGTTTCTGACGAATTTCTTAATCTTCTTCCTCCTGATGACCCTCTTCTGAAAAAATGTATTGATCCCATGGATGCATTAGCCAGGGCAGCCATTAAATGGTCTAGATCTACAGACAATTTACATGAGAGAACTTAG

Protein sequence

MLDGGMAMPLYTLNSPAPIRGNANKTTTSFRRRLDLYSAVRISSVLQTDENDNLPASKKISSTGKSLSRSRTPRPLLGPPNTDGQESIPFVVCSDSTLDKGLPPLTSLSTFSTNSSQHGHNDAPIIENFKRKRVFLEQSGAQCLITPCHISHRWLNDKSESCRLPFIHVGDCVARELKEANLKPLEAGSNVRIGLLATDTSTAANFYNERLQNQGFDVVLPDEATMDHIVVPAVEALNKRDLEGARNLLRIAVHVLLVRAANMVILVSDEFLNLLPPDDPLLKKCIDPMDALARAAIKWSRSTDNLHERT

Homology

[Close]

BLAST of Moc06g07010 vs. NCBI nr
Match: XP_022144925.1 (uncharacterized protein LOC111014484 isoform X2 [Momordica charantia] >XP_022144926.1 uncharacterized protein LOC111014484 isoform X2 [Momordica charantia] >XP_022144928.1 uncharacterized protein LOC111014484 isoform X2 [Momordica charantia])

HSP 1 Score: 605.1 bits (1559), Expect = 3.3e-169
Identity = 310/335 (92.54%), Postives = 310/335 (92.54%), Query Frame = 0


Query: 1   MLDGGMAMPLYTLNSPAPIRGNANKTTTSFRRRLDLYSAVRISSVLQTDENDNLPASKKI 60
           MLDGGMAMPLYTLNSPAPIRGNANKTTTSFRRRLDLYSAVRISSVLQTDENDNLPASKKI
Sbjct: 1   MLDGGMAMPLYTLNSPAPIRGNANKTTTSFRRRLDLYSAVRISSVLQTDENDNLPASKKI 60

Query: 61  SSTGKSLSRSRTPRPLLGPPNT-------------------------DGQESIPFVVCSD 120
           SSTGKSLSRSRTPRPLLGPPNT                         DGQESIPFVVCSD
Sbjct: 61  SSTGKSLSRSRTPRPLLGPPNTVGVIGGVSVFSTLLFLEKLVWWSFKDGQESIPFVVCSD 120

Query: 121 STLDKGLPPLTSLSTFSTNSSQHGHNDAPIIENFKRKRVFLEQSGAQCLITPCHISHRWL 180
           STLDKGLPPLTSLSTFSTNSSQHGHNDAPIIENFKRKRVFLEQSGAQCLITPCHISHRWL
Sbjct: 121 STLDKGLPPLTSLSTFSTNSSQHGHNDAPIIENFKRKRVFLEQSGAQCLITPCHISHRWL 180

Query: 181 NDKSESCRLPFIHVGDCVARELKEANLKPLEAGSNVRIGLLATDTSTAANFYNERLQNQG 240
           NDKSESCRLPFIHVGDCVARELKEANLKPLEAGSNVRIGLLATDTSTAANFYNERLQNQG
Sbjct: 181 NDKSESCRLPFIHVGDCVARELKEANLKPLEAGSNVRIGLLATDTSTAANFYNERLQNQG 240

Query: 241 FDVVLPDEATMDHIVVPAVEALNKRDLEGARNLLRIAVHVLLVRAANMVILVSDEFLNLL 300
           FDVVLPDEATMDHIVVPAVEALNKRDLEGARNLLRIAVHVLLVRAANMVILVSDEFLNLL
Sbjct: 241 FDVVLPDEATMDHIVVPAVEALNKRDLEGARNLLRIAVHVLLVRAANMVILVSDEFLNLL 300

Query: 301 PPDDPLLKKCIDPMDALARAAIKWSRSTDNLHERT 311
           PPDDPLLKKCIDPMDALARAAIKWSRSTDNLHERT
Sbjct: 301 PPDDPLLKKCIDPMDALARAAIKWSRSTDNLHERT 335

[Close]

BLAST of Moc06g07010 vs. NCBI nr
Match: XP_022144924.1 (uncharacterized protein LOC111014484 isoform X1 [Momordica charantia])

HSP 1 Score: 605.1 bits (1559), Expect = 3.3e-169
Identity = 310/335 (92.54%), Postives = 310/335 (92.54%), Query Frame = 0


Query: 1   MLDGGMAMPLYTLNSPAPIRGNANKTTTSFRRRLDLYSAVRISSVLQTDENDNLPASKKI 60
           MLDGGMAMPLYTLNSPAPIRGNANKTTTSFRRRLDLYSAVRISSVLQTDENDNLPASKKI
Sbjct: 2   MLDGGMAMPLYTLNSPAPIRGNANKTTTSFRRRLDLYSAVRISSVLQTDENDNLPASKKI 61

Query: 61  SSTGKSLSRSRTPRPLLGPPNT-------------------------DGQESIPFVVCSD 120
           SSTGKSLSRSRTPRPLLGPPNT                         DGQESIPFVVCSD
Sbjct: 62  SSTGKSLSRSRTPRPLLGPPNTVGVIGGVSVFSTLLFLEKLVWWSFKDGQESIPFVVCSD 121

Query: 121 STLDKGLPPLTSLSTFSTNSSQHGHNDAPIIENFKRKRVFLEQSGAQCLITPCHISHRWL 180
           STLDKGLPPLTSLSTFSTNSSQHGHNDAPIIENFKRKRVFLEQSGAQCLITPCHISHRWL
Sbjct: 122 STLDKGLPPLTSLSTFSTNSSQHGHNDAPIIENFKRKRVFLEQSGAQCLITPCHISHRWL 181

Query: 181 NDKSESCRLPFIHVGDCVARELKEANLKPLEAGSNVRIGLLATDTSTAANFYNERLQNQG 240
           NDKSESCRLPFIHVGDCVARELKEANLKPLEAGSNVRIGLLATDTSTAANFYNERLQNQG
Sbjct: 182 NDKSESCRLPFIHVGDCVARELKEANLKPLEAGSNVRIGLLATDTSTAANFYNERLQNQG 241

Query: 241 FDVVLPDEATMDHIVVPAVEALNKRDLEGARNLLRIAVHVLLVRAANMVILVSDEFLNLL 300
           FDVVLPDEATMDHIVVPAVEALNKRDLEGARNLLRIAVHVLLVRAANMVILVSDEFLNLL
Sbjct: 242 FDVVLPDEATMDHIVVPAVEALNKRDLEGARNLLRIAVHVLLVRAANMVILVSDEFLNLL 301

Query: 301 PPDDPLLKKCIDPMDALARAAIKWSRSTDNLHERT 311
           PPDDPLLKKCIDPMDALARAAIKWSRSTDNLHERT
Sbjct: 302 PPDDPLLKKCIDPMDALARAAIKWSRSTDNLHERT 336

[Close]

BLAST of Moc06g07010 vs. NCBI nr
Match: XP_038878952.1 (uncharacterized protein LOC120071036 [Benincasa hispida])

HSP 1 Score: 491.1 bits (1263), Expect = 7.0e-135
Identity = 245/334 (73.35%), Postives = 274/334 (82.04%), Query Frame = 0


Query: 1   MLDGGMAMPLYTLNSPAPIRGNANKTTTSFRRRLDLYSAVRISSVLQTDENDNLPASKKI 60
           MLDGGM    Y L  PAPIR NAN+  T FRRR++ YS+V+ISSV+QTD NDNLP SKKI
Sbjct: 1   MLDGGMTTSFYALTCPAPIRRNANEGITRFRRRINPYSSVQISSVIQTDANDNLPGSKKI 60

Query: 61  SSTGKSLSRSRTPRPLLGPPNT-------------------------DGQESIPFVVCSD 120
           SS+GKSLS++RTP+PLL  P T                         DGQESIPFVVCSD
Sbjct: 61  SSSGKSLSKTRTPKPLLVQPKTVGVIGGVSVFSTLLFLEKLVWWSMKDGQESIPFVVCSD 120

Query: 121 STLDKGLPPLTSLSTFSTNSSQHGHNDAPIIENFKRKRVFLEQSGAQCLITPCHISHRWL 180
             L KG+PPLTS  TFSTNSSQ+GH+D PIIEN KRKR FLEQSGA+CLITPCH++HRWL
Sbjct: 121 PALGKGIPPLTSSCTFSTNSSQYGHSDDPIIENLKRKRAFLEQSGARCLITPCHLTHRWL 180

Query: 181 NDKSESCRLPFIHVGDCVARELKEANLKPLEAGSNVRIGLLATDTSTAANFYNERLQNQG 240
            D SESC+LPF+HVGDCVARELKEA LKPLE GS+VRIGLLATDT+T A FY+ERLQNQG
Sbjct: 181 GDTSESCKLPFLHVGDCVARELKEAKLKPLEGGSSVRIGLLATDTATVAGFYHERLQNQG 240

Query: 241 FDVVLPDEATMDHIVVPAVEALNKRDLEGARNLLRIAVHVLLVRAANMVILVSDEFLNLL 300
           FD++LPDEATM+HIV+PAVEALNKRD EGARNLLRIAVHVLL+RA NMVIL SDE LNLL
Sbjct: 241 FDILLPDEATMEHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 300

Query: 301 PPDDPLLKKCIDPMDALARAAIKWSRSTDNLHER 310
           PPDDP+LKKCIDPMDALARAAIKWSRST+NLHE+
Sbjct: 301 PPDDPILKKCIDPMDALARAAIKWSRSTENLHEK 334

[Close]

BLAST of Moc06g07010 vs. NCBI nr
Match: XP_008465022.1 (PREDICTED: uncharacterized protein LOC103502741 isoform X1 [Cucumis melo] >KAA0046756.1 Amino-acid racemase isoform 2 [Cucumis melo var. makuwa])

HSP 1 Score: 470.3 bits (1209), Expect = 1.3e-128
Identity = 240/331 (72.51%), Postives = 267/331 (80.66%), Query Frame = 0


Query: 1   MLDGGMAMPLYTLNSPAPIRGNANKTTTSFRRRLDLYSAVRISSVLQTDENDNLPASKKI 60
           ML GGMAM  Y    PAP+R NAN+  T FRRR++LYS+V+ISSV+QTD NDNLP SKKI
Sbjct: 2   MLHGGMAMHFYAPICPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKKI 61

Query: 61  SSTGKSLSRSRTPRPLLGPPNT-------------------------DGQESIPFVVCSD 120
           SS GKSLS++RTP+PLL  PNT                         DGQESIPFVVCS+
Sbjct: 62  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSE 121

Query: 121 STLDKGLPPLTSLSTFSTNSSQHGHNDAPIIENFKRKRVFLEQSGAQCLITPCHISHRWL 180
             L KG+PP+TSL TFST+SSQ+GH+DAPIIEN  RKR FLE SGA+CLITPCH++HRWL
Sbjct: 122 PALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRWL 181

Query: 181 NDKSESCRLPFIHVGDCVARELKEANLKPLEAGSNVRIGLLATDTSTAANFYNERLQNQG 240
           +D SESC+LPF+HVGDCVARELKEA LKPLE G NVRIGLLATDT T    Y ERLQNQG
Sbjct: 182 SDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDT-TVTGIYYERLQNQG 241

Query: 241 FDVVLPDEATMDHIVVPAVEALNKRDLEGARNLLRIAVHVLLVRAANMVILVSDEFLNLL 300
           FDV+LPDEATM HIV+PAVEALNKRD EGARNLLRIAVHVLL+RA NMVIL SDE LNLL
Sbjct: 242 FDVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 301

Query: 301 PPDDPLLKKCIDPMDALARAAIKWSRSTDNL 307
           PPDDP+LKKCIDPMDALARAAIKWSRST+NL
Sbjct: 302 PPDDPILKKCIDPMDALARAAIKWSRSTENL 331

[Close]

BLAST of Moc06g07010 vs. NCBI nr
Match: TYK29691.1 (Amino-acid racemase isoform 2 [Cucumis melo var. makuwa])

HSP 1 Score: 469.9 bits (1208), Expect = 1.7e-128
Identity = 240/331 (72.51%), Postives = 267/331 (80.66%), Query Frame = 0


Query: 1   MLDGGMAMPLYTLNSPAPIRGNANKTTTSFRRRLDLYSAVRISSVLQTDENDNLPASKKI 60
           ML GGMAM  Y    PAP+R NAN+  T FRRR++LYS+V+ISSV+QTD NDNLP SKKI
Sbjct: 2   MLHGGMAMHFYAPIFPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKKI 61

Query: 61  SSTGKSLSRSRTPRPLLGPPNT-------------------------DGQESIPFVVCSD 120
           SS GKSLS++RTP+PLL  PNT                         DGQESIPFVVCS+
Sbjct: 62  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSE 121

Query: 121 STLDKGLPPLTSLSTFSTNSSQHGHNDAPIIENFKRKRVFLEQSGAQCLITPCHISHRWL 180
             L KG+PP+TSL TFST+SSQ+GH+DAPIIEN  RKR FLE SGA+CLITPCH++HRWL
Sbjct: 122 PALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRWL 181

Query: 181 NDKSESCRLPFIHVGDCVARELKEANLKPLEAGSNVRIGLLATDTSTAANFYNERLQNQG 240
           +D SESC+LPF+HVGDCVARELKEA LKPLE G NVRIGLLATDT T    Y ERLQNQG
Sbjct: 182 SDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDT-TVTGIYYERLQNQG 241

Query: 241 FDVVLPDEATMDHIVVPAVEALNKRDLEGARNLLRIAVHVLLVRAANMVILVSDEFLNLL 300
           FDV+LPDEATM HIV+PAVEALNKRD EGARNLLRIAVHVLL+RA NMVIL SDE LNLL
Sbjct: 242 FDVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 301

Query: 301 PPDDPLLKKCIDPMDALARAAIKWSRSTDNL 307
           PPDDP+LKKCIDPMDALARAAIKWSRST+NL
Sbjct: 302 PPDDPILKKCIDPMDALARAAIKWSRSTENL 331

[Close]

BLAST of Moc06g07010 vs. ExPASy Swiss-Prot
Match: O58403 (Aspartate racemase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=PH0670 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.9e-12
Identity = 46/163 (28.22%), Postives = 78/163 (47.85%), Query Frame = 0


Query: 136 LEQSGAQCLITPCHISHRWLNDKSESCRLPFIHVGDCVARELKEANLKPLEAGSNVRIGL 195
           LE+ GA  +I PC+ +H ++ D  ++ ++P I + +  A+++KE   K        + GL
Sbjct: 70  LEECGADFIIMPCNTAHAFVEDIRKAIKIPIISMIEETAKKVKELGFK--------KAGL 129

Query: 196 LATDTSTAANFYNERLQNQGFDVVLPDEATMDHIVVPAVEALNKRDLEGARNLLRIAVHV 255
           LAT  +  +  Y +     G +++ P E     ++    E +   +L+  R LL     +
Sbjct: 130 LATTGTIVSGVYEKEFSKYGVEIMTPTEDEQKDVMRGIYEGVKAGNLKLGRELLLKTAKI 189

Query: 256 LLVRAANMVILVSDEFLNLLPPDDPLLKKCIDPMDALARAAIK 299
           L  R A  +I    E   +L  DD L    IDPMD +A  A+K
Sbjct: 190 LEERGAECIIAGCTEVSVVLKQDD-LKVPLIDPMDVIAEVAVK 223

[Close]

BLAST of Moc06g07010 vs. ExPASy TrEMBL
Match: A0A6J1CT04 (uncharacterized protein LOC111014484 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014484 PE=4 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.6e-169
Identity = 310/335 (92.54%), Postives = 310/335 (92.54%), Query Frame = 0


Query: 1   MLDGGMAMPLYTLNSPAPIRGNANKTTTSFRRRLDLYSAVRISSVLQTDENDNLPASKKI 60
           MLDGGMAMPLYTLNSPAPIRGNANKTTTSFRRRLDLYSAVRISSVLQTDENDNLPASKKI
Sbjct: 1   MLDGGMAMPLYTLNSPAPIRGNANKTTTSFRRRLDLYSAVRISSVLQTDENDNLPASKKI 60

Query: 61  SSTGKSLSRSRTPRPLLGPPNT-------------------------DGQESIPFVVCSD 120
           SSTGKSLSRSRTPRPLLGPPNT                         DGQESIPFVVCSD
Sbjct: 61  SSTGKSLSRSRTPRPLLGPPNTVGVIGGVSVFSTLLFLEKLVWWSFKDGQESIPFVVCSD 120

Query: 121 STLDKGLPPLTSLSTFSTNSSQHGHNDAPIIENFKRKRVFLEQSGAQCLITPCHISHRWL 180
           STLDKGLPPLTSLSTFSTNSSQHGHNDAPIIENFKRKRVFLEQSGAQCLITPCHISHRWL
Sbjct: 121 STLDKGLPPLTSLSTFSTNSSQHGHNDAPIIENFKRKRVFLEQSGAQCLITPCHISHRWL 180

Query: 181 NDKSESCRLPFIHVGDCVARELKEANLKPLEAGSNVRIGLLATDTSTAANFYNERLQNQG 240
           NDKSESCRLPFIHVGDCVARELKEANLKPLEAGSNVRIGLLATDTSTAANFYNERLQNQG
Sbjct: 181 NDKSESCRLPFIHVGDCVARELKEANLKPLEAGSNVRIGLLATDTSTAANFYNERLQNQG 240

Query: 241 FDVVLPDEATMDHIVVPAVEALNKRDLEGARNLLRIAVHVLLVRAANMVILVSDEFLNLL 300
           FDVVLPDEATMDHIVVPAVEALNKRDLEGARNLLRIAVHVLLVRAANMVILVSDEFLNLL
Sbjct: 241 FDVVLPDEATMDHIVVPAVEALNKRDLEGARNLLRIAVHVLLVRAANMVILVSDEFLNLL 300

Query: 301 PPDDPLLKKCIDPMDALARAAIKWSRSTDNLHERT 311
           PPDDPLLKKCIDPMDALARAAIKWSRSTDNLHERT
Sbjct: 301 PPDDPLLKKCIDPMDALARAAIKWSRSTDNLHERT 335

[Close]

BLAST of Moc06g07010 vs. ExPASy TrEMBL
Match: A0A6J1CTP8 (uncharacterized protein LOC111014484 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014484 PE=4 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.6e-169
Identity = 310/335 (92.54%), Postives = 310/335 (92.54%), Query Frame = 0


Query: 1   MLDGGMAMPLYTLNSPAPIRGNANKTTTSFRRRLDLYSAVRISSVLQTDENDNLPASKKI 60
           MLDGGMAMPLYTLNSPAPIRGNANKTTTSFRRRLDLYSAVRISSVLQTDENDNLPASKKI
Sbjct: 2   MLDGGMAMPLYTLNSPAPIRGNANKTTTSFRRRLDLYSAVRISSVLQTDENDNLPASKKI 61

Query: 61  SSTGKSLSRSRTPRPLLGPPNT-------------------------DGQESIPFVVCSD 120
           SSTGKSLSRSRTPRPLLGPPNT                         DGQESIPFVVCSD
Sbjct: 62  SSTGKSLSRSRTPRPLLGPPNTVGVIGGVSVFSTLLFLEKLVWWSFKDGQESIPFVVCSD 121

Query: 121 STLDKGLPPLTSLSTFSTNSSQHGHNDAPIIENFKRKRVFLEQSGAQCLITPCHISHRWL 180
           STLDKGLPPLTSLSTFSTNSSQHGHNDAPIIENFKRKRVFLEQSGAQCLITPCHISHRWL
Sbjct: 122 STLDKGLPPLTSLSTFSTNSSQHGHNDAPIIENFKRKRVFLEQSGAQCLITPCHISHRWL 181

Query: 181 NDKSESCRLPFIHVGDCVARELKEANLKPLEAGSNVRIGLLATDTSTAANFYNERLQNQG 240
           NDKSESCRLPFIHVGDCVARELKEANLKPLEAGSNVRIGLLATDTSTAANFYNERLQNQG
Sbjct: 182 NDKSESCRLPFIHVGDCVARELKEANLKPLEAGSNVRIGLLATDTSTAANFYNERLQNQG 241

Query: 241 FDVVLPDEATMDHIVVPAVEALNKRDLEGARNLLRIAVHVLLVRAANMVILVSDEFLNLL 300
           FDVVLPDEATMDHIVVPAVEALNKRDLEGARNLLRIAVHVLLVRAANMVILVSDEFLNLL
Sbjct: 242 FDVVLPDEATMDHIVVPAVEALNKRDLEGARNLLRIAVHVLLVRAANMVILVSDEFLNLL 301

Query: 301 PPDDPLLKKCIDPMDALARAAIKWSRSTDNLHERT 311
           PPDDPLLKKCIDPMDALARAAIKWSRSTDNLHERT
Sbjct: 302 PPDDPLLKKCIDPMDALARAAIKWSRSTDNLHERT 336

[Close]

BLAST of Moc06g07010 vs. ExPASy TrEMBL
Match: A0A5A7TXR8 (Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00390 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 6.2e-129
Identity = 240/331 (72.51%), Postives = 267/331 (80.66%), Query Frame = 0


Query: 1   MLDGGMAMPLYTLNSPAPIRGNANKTTTSFRRRLDLYSAVRISSVLQTDENDNLPASKKI 60
           ML GGMAM  Y    PAP+R NAN+  T FRRR++LYS+V+ISSV+QTD NDNLP SKKI
Sbjct: 2   MLHGGMAMHFYAPICPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKKI 61

Query: 61  SSTGKSLSRSRTPRPLLGPPNT-------------------------DGQESIPFVVCSD 120
           SS GKSLS++RTP+PLL  PNT                         DGQESIPFVVCS+
Sbjct: 62  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSE 121

Query: 121 STLDKGLPPLTSLSTFSTNSSQHGHNDAPIIENFKRKRVFLEQSGAQCLITPCHISHRWL 180
             L KG+PP+TSL TFST+SSQ+GH+DAPIIEN  RKR FLE SGA+CLITPCH++HRWL
Sbjct: 122 PALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRWL 181

Query: 181 NDKSESCRLPFIHVGDCVARELKEANLKPLEAGSNVRIGLLATDTSTAANFYNERLQNQG 240
           +D SESC+LPF+HVGDCVARELKEA LKPLE G NVRIGLLATDT T    Y ERLQNQG
Sbjct: 182 SDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDT-TVTGIYYERLQNQG 241

Query: 241 FDVVLPDEATMDHIVVPAVEALNKRDLEGARNLLRIAVHVLLVRAANMVILVSDEFLNLL 300
           FDV+LPDEATM HIV+PAVEALNKRD EGARNLLRIAVHVLL+RA NMVIL SDE LNLL
Sbjct: 242 FDVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 301

Query: 301 PPDDPLLKKCIDPMDALARAAIKWSRSTDNL 307
           PPDDP+LKKCIDPMDALARAAIKWSRST+NL
Sbjct: 302 PPDDPILKKCIDPMDALARAAIKWSRSTENL 331

[Close]

BLAST of Moc06g07010 vs. ExPASy TrEMBL
Match: A0A1S3CMU2 (uncharacterized protein LOC103502741 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502741 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 6.2e-129
Identity = 240/331 (72.51%), Postives = 267/331 (80.66%), Query Frame = 0


Query: 1   MLDGGMAMPLYTLNSPAPIRGNANKTTTSFRRRLDLYSAVRISSVLQTDENDNLPASKKI 60
           ML GGMAM  Y    PAP+R NAN+  T FRRR++LYS+V+ISSV+QTD NDNLP SKKI
Sbjct: 2   MLHGGMAMHFYAPICPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKKI 61

Query: 61  SSTGKSLSRSRTPRPLLGPPNT-------------------------DGQESIPFVVCSD 120
           SS GKSLS++RTP+PLL  PNT                         DGQESIPFVVCS+
Sbjct: 62  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSE 121

Query: 121 STLDKGLPPLTSLSTFSTNSSQHGHNDAPIIENFKRKRVFLEQSGAQCLITPCHISHRWL 180
             L KG+PP+TSL TFST+SSQ+GH+DAPIIEN  RKR FLE SGA+CLITPCH++HRWL
Sbjct: 122 PALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRWL 181

Query: 181 NDKSESCRLPFIHVGDCVARELKEANLKPLEAGSNVRIGLLATDTSTAANFYNERLQNQG 240
           +D SESC+LPF+HVGDCVARELKEA LKPLE G NVRIGLLATDT T    Y ERLQNQG
Sbjct: 182 SDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDT-TVTGIYYERLQNQG 241

Query: 241 FDVVLPDEATMDHIVVPAVEALNKRDLEGARNLLRIAVHVLLVRAANMVILVSDEFLNLL 300
           FDV+LPDEATM HIV+PAVEALNKRD EGARNLLRIAVHVLL+RA NMVIL SDE LNLL
Sbjct: 242 FDVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 301

Query: 301 PPDDPLLKKCIDPMDALARAAIKWSRSTDNL 307
           PPDDP+LKKCIDPMDALARAAIKWSRST+NL
Sbjct: 302 PPDDPILKKCIDPMDALARAAIKWSRSTENL 331

[Close]

BLAST of Moc06g07010 vs. ExPASy TrEMBL
Match: A0A5D3E266 (Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00430 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 8.0e-129
Identity = 240/331 (72.51%), Postives = 267/331 (80.66%), Query Frame = 0


Query: 1   MLDGGMAMPLYTLNSPAPIRGNANKTTTSFRRRLDLYSAVRISSVLQTDENDNLPASKKI 60
           ML GGMAM  Y    PAP+R NAN+  T FRRR++LYS+V+ISSV+QTD NDNLP SKKI
Sbjct: 2   MLHGGMAMHFYAPIFPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKKI 61

Query: 61  SSTGKSLSRSRTPRPLLGPPNT-------------------------DGQESIPFVVCSD 120
           SS GKSLS++RTP+PLL  PNT                         DGQESIPFVVCS+
Sbjct: 62  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSE 121

Query: 121 STLDKGLPPLTSLSTFSTNSSQHGHNDAPIIENFKRKRVFLEQSGAQCLITPCHISHRWL 180
             L KG+PP+TSL TFST+SSQ+GH+DAPIIEN  RKR FLE SGA+CLITPCH++HRWL
Sbjct: 122 PALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRWL 181

Query: 181 NDKSESCRLPFIHVGDCVARELKEANLKPLEAGSNVRIGLLATDTSTAANFYNERLQNQG 240
           +D SESC+LPF+HVGDCVARELKEA LKPLE G NVRIGLLATDT T    Y ERLQNQG
Sbjct: 182 SDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDT-TVTGIYYERLQNQG 241

Query: 241 FDVVLPDEATMDHIVVPAVEALNKRDLEGARNLLRIAVHVLLVRAANMVILVSDEFLNLL 300
           FDV+LPDEATM HIV+PAVEALNKRD EGARNLLRIAVHVLL+RA NMVIL SDE LNLL
Sbjct: 242 FDVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 301

Query: 301 PPDDPLLKKCIDPMDALARAAIKWSRSTDNL 307
           PPDDP+LKKCIDPMDALARAAIKWSRST+NL
Sbjct: 302 PPDDPILKKCIDPMDALARAAIKWSRSTENL 331

[Close]

BLAST of Moc06g07010 vs. TAIR 10
Match: AT1G15410.1 (aspartate-glutamate racemase family )

HSP 1 Score: 248.4 bits (633), Expect = 7.3e-66
Identity = 137/308 (44.48%), Postives = 193/308 (62.66%), Query Frame = 0


Query: 29  SFRRRLDLYSAVRISSV-LQTDENDNLPASKK---ISSTGKSLSRSRTPRPLLGPPNT-- 88
           S R RL    A+  SSV L  DE+++LP  KK   +S   ++   S     LL   NT  
Sbjct: 23  SCRVRLSRVLAMPPSSVLLHMDESNDLPKPKKGFCLSEDSRNSLNSLPADSLLRQANTVG 82

Query: 89  -----------------------DGQESIPFVVCSDSTLDKGLPPLTSLSTFSTNSSQHG 148
                                  DG+ S+PFV+CSD  L+K    L      S  S  H 
Sbjct: 83  IIGGVSTDSTLKFVKKLVDWSSNDGKSSLPFVLCSDPALNK---ELLLYEENSYPSLYHR 142

Query: 149 HNDAP-----IIENFKRKRVFLEQSGAQCLITPCHISHRWLNDKSESCRLPFIHVGDCVA 208
               P     I+EN + KR +LE+ GA+ ++ PCHI+H W  +  E   +P +H+G+C+A
Sbjct: 143 EESTPVDPKLIVENLRNKRRYLERCGAKLILMPCHIAHIWYEEVCEGSLVPLLHMGECIA 202

Query: 209 RELKEANLKPLEAGSNVRIGLLATDTSTAANFYNERLQNQGFDVVLPDEATMDHIVVPAV 268
           +EL+EA +KPLEAG+ +R+G++AT  + +A FY E+LQ+ GF+ VLPD+ATM+H V+P++
Sbjct: 203 KELQEAKMKPLEAGNPLRVGVMATSATLSAGFYQEKLQSNGFEAVLPDKATMEHTVIPSI 262

Query: 269 EALNKRDLEGARNLLRIAVHVLLVRAANMVILVSDEFLNLLPPDDPLLKKCIDPMDALAR 303
           EA+ ++D+EGARNLLRIA+ VLLV+A N+V+L SDE  +LLP DDPLLKKC+DPMDALAR
Sbjct: 263 EAMKRKDMEGARNLLRIALQVLLVQAVNVVMLGSDEMRDLLPGDDPLLKKCVDPMDALAR 322

The following BLAST results are available for this feature:

BLAST of Moc06g07010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144925.1	3.3e-169	92.54	uncharacterized protein LOC111014484 isoform X2 [Momordica charantia] >XP_022144...	[more]
XP_022144924.1	3.3e-169	92.54	uncharacterized protein LOC111014484 isoform X1 [Momordica charantia]	[more]
XP_038878952.1	7.0e-135	73.35	uncharacterized protein LOC120071036 [Benincasa hispida]	[more]
XP_008465022.1	1.3e-128	72.51	PREDICTED: uncharacterized protein LOC103502741 isoform X1 [Cucumis melo] >KAA00...	[more]
TYK29691.1	1.7e-128	72.51	Amino-acid racemase isoform 2 [Cucumis melo var. makuwa]	[more]

BLAST of Moc06g07010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O58403	5.9e-12	28.22	Aspartate racemase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JC...	[more]

BLAST of Moc06g07010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CT04	1.6e-169	92.54	uncharacterized protein LOC111014484 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CTP8	1.6e-169	92.54	uncharacterized protein LOC111014484 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A5A7TXR8	6.2e-129	72.51	Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3CMU2	6.2e-129	72.51	uncharacterized protein LOC103502741 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3E266	8.0e-129	72.51	Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Moc06g07010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15410.1	7.3e-66	44.48	aspartate-glutamate racemase family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015942	Asp/Glu/hydantoin racemase	PFAM	PF01177	Asp_Glu_race	coord: 113..296 e-value: 1.1E-19 score: 71.2
None	No IPR available	GENE3D	3.40.50.1860		coord: 171..288 e-value: 7.6E-34 score: 119.4
None	No IPR available	GENE3D	3.40.50.1860		coord: 84..294 e-value: 7.6E-34 score: 119.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..70
None	No IPR available	PANTHER	PTHR21198	GLUTAMATE RACEMASE	coord: 83..307 coord: 1..83
None	No IPR available	PANTHER	PTHR21198:SF9	ASPARTATE RACEMASE	coord: 83..307 coord: 1..83
IPR001920	Asp/Glu racemase	SUPERFAMILY	53681	Aspartate/glutamate racemase	coord: 192..299
IPR001920	Asp/Glu racemase	SUPERFAMILY	53681	Aspartate/glutamate racemase	coord: 120..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g07010.1	Moc06g07010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006807	nitrogen compound metabolic process
molecular_function	GO:0036361	racemase activity, acting on amino acids and derivatives
molecular_function	GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives