Moc06g06380 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g06380
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	RING-type domain-containing protein
Location	chr6: 4599929 .. 4602003 (+)
RNA-Seq Expression	Moc06g06380
Synteny	Moc06g06380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAGCGCAAGCGGGCCTCCTCTGATCACACCCACCCCGATCCTCCTCTTCACCTCTCCGGTATGCTTCCCCATTTACCCACATGCACTCTTTCTGTTTGTAGAAATGTCTGAATGAGATTGTTGATTGTTTTGCATCGAGACGTTGTTGAATCACCTTTGTTTGTGCTTTAAATTTAATGGGGTGATGTGGGTTTTTAAGTAATTTGGCATTTGGGTTTTGCCTTTTCTTCTTGGAAGTTCAATTGTGGGAAATAAAGAACGGTTGTTGGTTTCCTTTGCTGTGGGAGTATTTTATTTCCACGACCAGATATTGGGTTGTTTACGCCCTTATAGATGCATTAATCTCAGTTATTTGTCTGCTTCAATATCTTTTGGAATTAGCTCTGGTTGGATACATTTGAGCTCTTTTTCTTTTGATTAGACGAAGATTGAGATGTGTTATTCTAGATATCAAGGTGGAGTTTGAGTTAGTCTTACGTTTTAGAACTGATGATTTATCTTTTGAAGTCCTTGGTATATCTGATTATCCTATGTTTTGAACAATGAAATGGTTCTTATCTTACGTATGTTGCAGGTGTGGTGCCTTTTTCCAATCAAATGGATGTGCTGTCGGAAGAGGTCTGTACTCTTTTGTTTGCTTCAGAAATTTTACCCATCCTAAAATTGGGAAACTATTTCTACTCTACTTTGTTATTTAAACTTGTATGCTTCCTTGGCCTTGGTTCCACCTTCAGTGAGTAGACAAAAGAATAGTTCTATCCTTTCCCTTTCTCGAGGAACATTTTTGTTAAGTTCTCTTTTTAGTGGATCACAATCTATAAAAGCTAAGCTGCATTGAACCAGCAGGATCAGAGTCTTGCTCGTCCAGTATTCATGAAGCGTTCACGTCATCAGTATAGTCATCAATATTGTCGGCGAGGTTCAACCAGTCAAGCAAATGCATCCACCTCTCGTGAAAATCGAGTCAGAACTGTACTTGAAGAGCGACCCGCCTTTAAATTTGCTGCTCATTGCAACTCAGAGTTCCCAAACCACATAGGTACCCTTTTTGAAGTTCCTAAACACGGTTGTACGCTTTTTCTCAGAGGGAATGGGAGTCTATTTGTTGCAATGACATGTTCACTTGTATGATCTTATATGGTATAAGGTCTAGAAAATTTGTACTCCACATATTATATGGCCATATAATCAGATGAAAAGACCCAAAAACATAAACTATGCAAGTATGAGGTGATTTGTATACCACATCTCTGATGGAATAAATAAGCATAAGTAAAACTCCAACATTTCTTCTGGTTGTGCCTTTAGGTTGTTCTCTTTTGGCCACTTTGGCTTTTTGAATATATAGTTTCCGTTTCTTATCAGAGAAAAAAAAAACATTTCTTCTGGTTGGATGACTATTGCACCGTTTCTTTGAATTAGATTTCATATTCTTTATGACATCAATATATTCAGCATCGGTCGCCTATTTTTCTATCTCATTTATCTGCAGTAAGCAGTTCTGGTCATATTCTGTCATTGAAAGAACCATAAATTGTATGGCAGGAAACACTTATTTACGGAGGGAAAATTTCCTAATTATGTATCATATACCTCGAATCAAGTTAGAATCTCCATCTAGATAAATTGTAATGATCTTCCCCTCATCCCACACCATTTGAAGCTCTAGCTTTTGTGGGGGAAGATAATTTGCTTCCTTCATTGATGATGTTGTTATTCGTTCTGTATTAATTCAACTTTTTGCATTGATTTTAGAGAGCATTGAGAATACCTTTTGGGGGCCAGAGAGGATAAGGTACAGTTCCTTAGGGAAGGATGCAATTTCATCTCATGGAGTGAGAATGCTGTGTGGAATTTGCCAAAAGCTGATGAGACGAAAGCTTTGCTTTCTCGGCAACACGCTTTCTTCCAGTGAACTTCCTGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGACTGTCTGGAGATCAGGTCAAAGGTCGAAGACAGAAGCGATCCACCTTGTCCCTTGTGCACGGAACCGTCCACCAAAATCGACGACTCAAAAGGAGGACAGGCATGA

mRNA sequence

ATGGGGAAGCGCAAGCGGGCCTCCTCTGATCACACCCACCCCGATCCTCCTCTTCACCTCTCCGGTGTGGTGCCTTTTTCCAATCAAATGGATGTGCTGTCGGAAGAGGATCAGAGTCTTGCTCGTCCAGTATTCATGAAGCGTTCACGTCATCAGTATAGTCATCAATATTGTCGGCGAGGTTCAACCAGTCAAGCAAATGCATCCACCTCTCGTGAAAATCGAGTCAGAACTGTACTTGAAGAGCGACCCGCCTTTAAATTTGCTGCTCATTGCAACTCAGAGTTCCCAAACCACATAGAGAGCATTGAGAATACCTTTTGGGGGCCAGAGAGGATAAGGTACAGTTCCTTAGGGAAGGATGCAATTTCATCTCATGGAGTGAGAATGCTGTGTGGAATTTGCCAAAAGCTGATGAGACGAAAGCTTTGCTTTCTCGGCAACACGCTTTCTTCCAGTGAACTTCCTGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGACTGTCTGGAGATCAGGTCAAAGGTCGAAGACAGAAGCGATCCACCTTGTCCCTTGTGCACGGAACCGTCCACCAAAATCGACGACTCAAAAGGAGGACAGGCATGA

Coding sequence (CDS)

ATGGGGAAGCGCAAGCGGGCCTCCTCTGATCACACCCACCCCGATCCTCCTCTTCACCTCTCCGGTGTGGTGCCTTTTTCCAATCAAATGGATGTGCTGTCGGAAGAGGATCAGAGTCTTGCTCGTCCAGTATTCATGAAGCGTTCACGTCATCAGTATAGTCATCAATATTGTCGGCGAGGTTCAACCAGTCAAGCAAATGCATCCACCTCTCGTGAAAATCGAGTCAGAACTGTACTTGAAGAGCGACCCGCCTTTAAATTTGCTGCTCATTGCAACTCAGAGTTCCCAAACCACATAGAGAGCATTGAGAATACCTTTTGGGGGCCAGAGAGGATAAGGTACAGTTCCTTAGGGAAGGATGCAATTTCATCTCATGGAGTGAGAATGCTGTGTGGAATTTGCCAAAAGCTGATGAGACGAAAGCTTTGCTTTCTCGGCAACACGCTTTCTTCCAGTGAACTTCCTGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGACTGTCTGGAGATCAGGTCAAAGGTCGAAGACAGAAGCGATCCACCTTGTCCCTTGTGCACGGAACCGTCCACCAAAATCGACGACTCAAAAGGAGGACAGGCATGA

Protein sequence

MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLGKDAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVEDRSDPPCPLCTEPSTKIDDSKGGQA

Homology

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BLAST of Moc06g06380 vs. NCBI nr
Match: XP_022134599.1 (uncharacterized protein LOC111006826 [Momordica charantia])

HSP 1 Score: 422.5 bits (1085), Expect = 2.0e-114
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRR 60
           MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRR
Sbjct: 1   MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRR 60

Query: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLGK 120
           GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLGK
Sbjct: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLGK 120

Query: 121 DAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVED 180
           DAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVED
Sbjct: 121 DAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVED 180

Query: 181 RSDPPCPLCTEPSTKIDDSKGGQA 205
           RSDPPCPLCTEPSTKIDDSKGGQA
Sbjct: 181 RSDPPCPLCTEPSTKIDDSKGGQA 204

[Close]

BLAST of Moc06g06380 vs. NCBI nr
Match: XP_038878632.1 (uncharacterized protein LOC120070818 isoform X2 [Benincasa hispida])

HSP 1 Score: 366.7 bits (940), Expect = 1.3e-97
Identity = 176/203 (86.70%), Postives = 187/203 (92.12%), Query Frame = 0


Query: 1   MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRR 60
           MGKRKR  SD TH DPPLHLSG+VPFSNQMDV SEED+S ARPVFMKRSRHQYSHQYCRR
Sbjct: 1   MGKRKR-GSDQTHHDPPLHLSGMVPFSNQMDVRSEEDRSPARPVFMKRSRHQYSHQYCRR 60

Query: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLGK 120
           GSTS ANAS SRENRV+TVLEERPAFKFAAHCNSEFP+HIESIE TFWGPERIRY+S GK
Sbjct: 61  GSTSHANASMSRENRVKTVLEERPAFKFAAHCNSEFPDHIESIEKTFWGPERIRYNSFGK 120

Query: 121 DAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVED 180
           DA SSHG+RM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLE RS VED
Sbjct: 121 DAFSSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVED 180

Query: 181 RSDPPCPLCTEPSTKIDDSKGGQ 204
           RSDPPCPLC EP  ++DDSKGG+
Sbjct: 181 RSDPPCPLCMEPPPEVDDSKGGE 202

[Close]

BLAST of Moc06g06380 vs. NCBI nr
Match: XP_038878631.1 (uncharacterized protein LOC120070818 isoform X1 [Benincasa hispida])

HSP 1 Score: 362.1 bits (928), Expect = 3.2e-96
Identity = 176/204 (86.27%), Postives = 187/204 (91.67%), Query Frame = 0


Query: 1   MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEE-DQSLARPVFMKRSRHQYSHQYCR 60
           MGKRKR  SD TH DPPLHLSG+VPFSNQMDV SEE D+S ARPVFMKRSRHQYSHQYCR
Sbjct: 1   MGKRKR-GSDQTHHDPPLHLSGMVPFSNQMDVRSEEQDRSPARPVFMKRSRHQYSHQYCR 60

Query: 61  RGSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLG 120
           RGSTS ANAS SRENRV+TVLEERPAFKFAAHCNSEFP+HIESIE TFWGPERIRY+S G
Sbjct: 61  RGSTSHANASMSRENRVKTVLEERPAFKFAAHCNSEFPDHIESIEKTFWGPERIRYNSFG 120

Query: 121 KDAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVE 180
           KDA SSHG+RM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLE RS VE
Sbjct: 121 KDAFSSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVE 180

Query: 181 DRSDPPCPLCTEPSTKIDDSKGGQ 204
           DRSDPPCPLC EP  ++DDSKGG+
Sbjct: 181 DRSDPPCPLCMEPPPEVDDSKGGE 203

[Close]

BLAST of Moc06g06380 vs. NCBI nr
Match: TYK06338.1 (uncharacterized protein E5676_scaffold163G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 358.6 bits (919), Expect = 3.5e-95
Identity = 176/203 (86.70%), Postives = 187/203 (92.12%), Query Frame = 0


Query: 1   MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRR 60
           MGKRKR  SD TH DPPLHLSG+VPFSNQ DV SEED SLARP+FMKRSRH YSHQYCRR
Sbjct: 1   MGKRKR-GSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRR 60

Query: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLGK 120
           GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFP+ IESIE+TF GPERIRY+SLGK
Sbjct: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGK 120

Query: 121 DAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVED 180
           DAISSH VRM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLE RS VED
Sbjct: 121 DAISSHLVRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVED 180

Query: 181 RSDPPCPLCTEPSTKIDDSKGGQ 204
           RSDPPCPLCT+   ++DDSKGG+
Sbjct: 181 RSDPPCPLCTKLPPEVDDSKGGE 202

[Close]

BLAST of Moc06g06380 vs. NCBI nr
Match: XP_008443927.1 (PREDICTED: uncharacterized protein LOC103487402 isoform X2 [Cucumis melo] >KAA0050085.1 uncharacterized protein E6C27_scaffold675G00690 [Cucumis melo var. makuwa])

HSP 1 Score: 357.5 bits (916), Expect = 7.9e-95
Identity = 175/203 (86.21%), Postives = 187/203 (92.12%), Query Frame = 0


Query: 1   MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRR 60
           MGKRKR  SD TH DPPLHLSG+VPFSNQ DV SEED SLARP+FMKRSRH YSHQYCRR
Sbjct: 1   MGKRKR-GSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRR 60

Query: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLGK 120
           GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFP+ IESIE+TF GPERIRY+SLGK
Sbjct: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGK 120

Query: 121 DAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVED 180
           DAISSH +RM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLE RS VED
Sbjct: 121 DAISSHLMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVED 180

Query: 181 RSDPPCPLCTEPSTKIDDSKGGQ 204
           RSDPPCPLCT+   ++DDSKGG+
Sbjct: 181 RSDPPCPLCTKLPPEVDDSKGGE 202

[Close]

BLAST of Moc06g06380 vs. ExPASy TrEMBL
Match: A0A6J1BZ68 (uncharacterized protein LOC111006826 OS=Momordica charantia OX=3673 GN=LOC111006826 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 9.7e-115
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRR 60
           MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRR
Sbjct: 1   MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRR 60

Query: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLGK 120
           GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLGK
Sbjct: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLGK 120

Query: 121 DAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVED 180
           DAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVED
Sbjct: 121 DAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVED 180

Query: 181 RSDPPCPLCTEPSTKIDDSKGGQA 205
           RSDPPCPLCTEPSTKIDDSKGGQA
Sbjct: 181 RSDPPCPLCTEPSTKIDDSKGGQA 204

[Close]

BLAST of Moc06g06380 vs. ExPASy TrEMBL
Match: A0A5D3C5B4 (RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00020 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.7e-95
Identity = 176/203 (86.70%), Postives = 187/203 (92.12%), Query Frame = 0


Query: 1   MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRR 60
           MGKRKR  SD TH DPPLHLSG+VPFSNQ DV SEED SLARP+FMKRSRH YSHQYCRR
Sbjct: 1   MGKRKR-GSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRR 60

Query: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLGK 120
           GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFP+ IESIE+TF GPERIRY+SLGK
Sbjct: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGK 120

Query: 121 DAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVED 180
           DAISSH VRM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLE RS VED
Sbjct: 121 DAISSHLVRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVED 180

Query: 181 RSDPPCPLCTEPSTKIDDSKGGQ 204
           RSDPPCPLCT+   ++DDSKGG+
Sbjct: 181 RSDPPCPLCTKLPPEVDDSKGGE 202

[Close]

BLAST of Moc06g06380 vs. ExPASy TrEMBL
Match: A0A5A7U906 (RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00690 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.8e-95
Identity = 175/203 (86.21%), Postives = 187/203 (92.12%), Query Frame = 0


Query: 1   MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRR 60
           MGKRKR  SD TH DPPLHLSG+VPFSNQ DV SEED SLARP+FMKRSRH YSHQYCRR
Sbjct: 1   MGKRKR-GSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRR 60

Query: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLGK 120
           GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFP+ IESIE+TF GPERIRY+SLGK
Sbjct: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGK 120

Query: 121 DAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVED 180
           DAISSH +RM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLE RS VED
Sbjct: 121 DAISSHLMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVED 180

Query: 181 RSDPPCPLCTEPSTKIDDSKGGQ 204
           RSDPPCPLCT+   ++DDSKGG+
Sbjct: 181 RSDPPCPLCTKLPPEVDDSKGGE 202

[Close]

BLAST of Moc06g06380 vs. ExPASy TrEMBL
Match: A0A1S3B956 (uncharacterized protein LOC103487402 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487402 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.8e-95
Identity = 175/203 (86.21%), Postives = 187/203 (92.12%), Query Frame = 0


Query: 1   MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRR 60
           MGKRKR  SD TH DPPLHLSG+VPFSNQ DV SEED SLARP+FMKRSRH YSHQYCRR
Sbjct: 1   MGKRKR-GSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRR 60

Query: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLGK 120
           GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFP+ IESIE+TF GPERIRY+SLGK
Sbjct: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGK 120

Query: 121 DAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVED 180
           DAISSH +RM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLE RS VED
Sbjct: 121 DAISSHLMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVED 180

Query: 181 RSDPPCPLCTEPSTKIDDSKGGQ 204
           RSDPPCPLCT+   ++DDSKGG+
Sbjct: 181 RSDPPCPLCTKLPPEVDDSKGGE 202

[Close]

BLAST of Moc06g06380 vs. ExPASy TrEMBL
Match: A0A0A0LT71 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G217850 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 7.5e-91
Identity = 169/203 (83.25%), Postives = 182/203 (89.66%), Query Frame = 0


Query: 1   MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRR 60
           MGKRKR  SD TH DPPLHLSG+VPFSNQ DV SEED SLARP+FMKRSRH +SHQYC R
Sbjct: 1   MGKRKR-GSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWR 60

Query: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLGK 120
           GSTSQANAS SRENRVRTVLEERPAFKFAAH NSEFP+ IESIE+TF  PERIRY+SLGK
Sbjct: 61  GSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGK 120

Query: 121 DAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVED 180
           DA SSH +RM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLE RS VED
Sbjct: 121 DAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVED 180

Query: 181 RSDPPCPLCTEPSTKIDDSKGGQ 204
           RSDPPCPLCT+P  ++DDSK G+
Sbjct: 181 RSDPPCPLCTKPPPEVDDSKRGE 202

[Close]

BLAST of Moc06g06380 vs. TAIR 10
Match: AT1G75400.1 (RING/U-box superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 8.9e-12
Identity = 28/62 (45.16%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 129 RMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVEDRSDPPCPL 188
           + +CG C KL+  +     +++++ ELP+AAVL CGHVYHA+CLE  +   ++ DP CP+
Sbjct: 278 QQVCGACSKLLTER-----SSIATFELPIAAVLACGHVYHAECLETMTTDIEKYDPACPI 334

Query: 189 CT 191
           CT
Sbjct: 338 CT 334

[Close]

BLAST of Moc06g06380 vs. TAIR 10
Match: AT1G19680.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.5e-11
Identity = 35/92 (38.04%), Postives = 50/92 (54.35%), Query Frame = 0


Query: 102 SIENTFWGPERIRYS--SLGKDAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAA 161
           S +N   G  R R S  S  + + S    +  CG C KL+  +     + ++  +LP+ A
Sbjct: 241 SFDNEHLGSGRRRLSGCSSSRFSCSPSVDQQTCGRCSKLLTER-----SPVARFDLPIPA 300

Query: 162 VLVCGHVYHADCLEIRSKVEDRSDPPCPLCTE 192
           VL CGHVYHA CLE  +   ++ DP CP+CTE
Sbjct: 301 VLACGHVYHAACLETMTNETEKYDPTCPICTE 327

[Close]

BLAST of Moc06g06380 vs. TAIR 10
Match: AT2G21500.2 (RING/U-box superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 5.8e-11
Identity = 33/90 (36.67%), Postives = 50/90 (55.56%), Query Frame = 0


Query: 102 SIENTFWGPERIRYSSLGKDAISSHGVRMLCGICQK-LMRRKLCFLGNTLSSSELPVAAV 161
           S +N  +G  R +  +LG    +    +  CG C + L  + L       +++EL VAA+
Sbjct: 224 SYDNECFGLRRDKIDNLGSRKSND---QQNCGACSRSLSEKSLLSSQKIFATNELSVAAI 283

Query: 162 LVCGHVYHADCLEIRSKVEDRSDPPCPLCT 191
           L CGHVYH++CLE  +   D+ DP CP+CT
Sbjct: 284 LACGHVYHSECLEQMTPEIDKFDPSCPICT 310

[Close]

BLAST of Moc06g06380 vs. TAIR 10
Match: AT2G21500.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 5.8e-11
Identity = 33/90 (36.67%), Postives = 50/90 (55.56%), Query Frame = 0


Query: 102 SIENTFWGPERIRYSSLGKDAISSHGVRMLCGICQK-LMRRKLCFLGNTLSSSELPVAAV 161
           S +N  +G  R +  +LG    +    +  CG C + L  + L       +++EL VAA+
Sbjct: 224 SYDNECFGLRRDKIDNLGSRKSND---QQNCGACSRSLSEKSLLSSQKIFATNELSVAAI 283

Query: 162 LVCGHVYHADCLEIRSKVEDRSDPPCPLCT 191
           L CGHVYH++CLE  +   D+ DP CP+CT
Sbjct: 284 LACGHVYHSECLEQMTPEIDKFDPSCPICT 310

[Close]

BLAST of Moc06g06380 vs. TAIR 10
Match: AT4G39140.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 5.8e-11
Identity = 33/80 (41.25%), Postives = 44/80 (55.00%), Query Frame = 0


Query: 118 LGKDAISSHGVRM------LCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAD 177
           L +D I  HG RM       CG C + L  + L        ++EL V+A+L CGHVYH +
Sbjct: 240 LQRDKIDHHGNRMSKHQQHTCGACSRPLSEKSLWSSQKIFMTNELSVSAILACGHVYHGE 299

Query: 178 CLEIRSKVEDRSDPPCPLCT 191
           CLE  +   D+ DP CP+CT
Sbjct: 300 CLEQMTPEIDKFDPSCPICT 319

The following BLAST results are available for this feature:

BLAST of Moc06g06380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134599.1	2.0e-114	100.00	uncharacterized protein LOC111006826 [Momordica charantia]	[more]
XP_038878632.1	1.3e-97	86.70	uncharacterized protein LOC120070818 isoform X2 [Benincasa hispida]	[more]
XP_038878631.1	3.2e-96	86.27	uncharacterized protein LOC120070818 isoform X1 [Benincasa hispida]	[more]
TYK06338.1	3.5e-95	86.70	uncharacterized protein E5676_scaffold163G00020 [Cucumis melo var. makuwa]	[more]
XP_008443927.1	7.9e-95	86.21	PREDICTED: uncharacterized protein LOC103487402 isoform X2 [Cucumis melo] >KAA00...	[more]

BLAST of Moc06g06380 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g06380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZ68	9.7e-115	100.00	uncharacterized protein LOC111006826 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A5D3C5B4	1.7e-95	86.70	RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5A7U906	3.8e-95	86.21	RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3B956	3.8e-95	86.21	uncharacterized protein LOC103487402 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LT71	7.5e-91	83.25	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G217850 P...	[more]

BLAST of Moc06g06380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75400.1	8.9e-12	45.16	RING/U-box superfamily protein	[more]
AT1G19680.1	1.5e-11	38.04	RING/U-box superfamily protein	[more]
AT2G21500.2	5.8e-11	36.67	RING/U-box superfamily protein	[more]
AT2G21500.1	5.8e-11	36.67	RING/U-box superfamily protein	[more]
AT4G39140.1	5.8e-11	41.25	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 132..189 e-value: 3.2E-4 score: 30.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 132..190 score: 9.863244
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 117..203 e-value: 2.3E-7 score: 32.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..204
None	No IPR available	PANTHER	PTHR31150	EXPRESSED PROTEIN	coord: 37..196
None	No IPR available	PANTHER	PTHR31150:SF6	CHROMATIN REGULATOR PHD FAMILY-RELATED	coord: 37..196
None	No IPR available	CDD	cd16448	RING-H2	coord: 132..189 e-value: 1.84867E-4 score: 35.8907
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 131..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g06380.1	Moc06g06380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding