Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGCGACAAAACAACTGAGCAAGTCGCACGTCGACCGACTGGTAGAGATAGAAGAACAACTTCTCTACCTAAGAGAAGTCCCAGATTCCCTCCGTCTGCTGGAGGCGCGAGTTGATGAATTCTCCGAGAAGTTTGGAGAAATAGACGCAGTGAATGCCCGTGTAGACGGGTTGCCGATACAAGATATAGCCATGAGGGTTGAGACCCTAGAAAGCAAAGCTACGCGTCCTGGTAGCTTCGAACGTGGAGATAGTTCCACGAACCCAAACACACAGATAGAAGTACGTATGGGAGAGTTAAACAACTCGCATTCGGCAATGATGCAATTGTTTAACGAAATGACAGAAGACTTCAAAGTAATCATCGACACCCTCCGAGCTGAGATGACTGAAATAAGCACTAGAGTGAACCTAACCATGCGAGCCGTGGAAATCAGGCTCCCAACCAAGCGAACATGGGGTTCAACAAGTTGAAGGTCCCAGAGCCCAAACCATTCAATGGCAATAGAGACGCAAAAGATCTCGAGAACTTCCTGTTCGACGTAGAACAGTACTTCAAGGCTACGGGGACAACGTCAGAAGAGATGAAAGTGACTTTGGCCACCATGCATCTTACTGATGATGCAAAGCTGTGGTGGAGATCTAAAGTCAACGACATTCAGAATGGTCGATGCACGATCAATAGCTGGGATGATCTGAAGAAAGAATTGAGGGGTCAGTTCTTCCCCGACAATGTCGAGTTCATGGCTAGAAGGAAGCTACGTGAACTCCGACACACTGGAACAATCTGGGACTACGTGAAACAATTCTCTGTCGTGATGCTGGATATTCGCGACATGTCAGAGAAAGACAAGGTGTTCGTCTTTATCGAAGGATTGAAACCGTGA
mRNA sequence
ATGTCGGCGACAAAACAACTGAGCAAGTCGCACGTCGACCGACTGGTAGAGATAGAAGAACAACTTCTCTACCTAAGAGAAGTCCCAGATTCCCTCCGTCTGCTGGAGGCGCGAGTTGATGAATTCTCCGAGAAGTTTGGAGAAATAGACGCAGTGAATGCCCGTGTAGACGGGTTGCCGATACAAGATATAGCCATGAGGGTTGAGACCCTAGAAAGCAAAGCTACGCGTCCTGGTAGCTTCGAACGTGGAGATAGTTCCACGAACCCAAACACACAGATAGAAGTACGTATGGGAGAGTTAAACAACTCGCATTCGGCAATGATGCAATTGTTTAACGAAATGACAGAAGACTTCAAAGCTCCCAACCAAGCGAACATGGGGTTCAACAAGTTGAAGGTCCCAGAGCCCAAACCATTCAATGGCAATAGAGACGCAAAAGATCTCGAGAACTTCCTGTTCGACGTAGAACAGTACTTCAAGGCTACGGGGACAACGTCAGAAGAGATGAAAGTGACTTTGGCCACCATGCATCTTACTGATGATGCAAAGCTGTGGTGGAGATCTAAAGTCAACGACATTCAGAATGGTCGATGCACGATCAATAGCTGGGATGATCTGAAGAAAGAATTGAGGGGTCAGTTCTTCCCCGACAATGTCGAGTTCATGGCTAGAAGGAAGCTACGTGAACTCCGACACACTGGAACAATCTGGGACTACGTGAAACAATTCTCTGTCGTGATGCTGGATATTCGCGACATGTCAGAGAAAGACAAGGTGTTCGTCTTTATCGAAGGATTGAAACCGTGA
Coding sequence (CDS)
ATGTCGGCGACAAAACAACTGAGCAAGTCGCACGTCGACCGACTGGTAGAGATAGAAGAACAACTTCTCTACCTAAGAGAAGTCCCAGATTCCCTCCGTCTGCTGGAGGCGCGAGTTGATGAATTCTCCGAGAAGTTTGGAGAAATAGACGCAGTGAATGCCCGTGTAGACGGGTTGCCGATACAAGATATAGCCATGAGGGTTGAGACCCTAGAAAGCAAAGCTACGCGTCCTGGTAGCTTCGAACGTGGAGATAGTTCCACGAACCCAAACACACAGATAGAAGTACGTATGGGAGAGTTAAACAACTCGCATTCGGCAATGATGCAATTGTTTAACGAAATGACAGAAGACTTCAAAGCTCCCAACCAAGCGAACATGGGGTTCAACAAGTTGAAGGTCCCAGAGCCCAAACCATTCAATGGCAATAGAGACGCAAAAGATCTCGAGAACTTCCTGTTCGACGTAGAACAGTACTTCAAGGCTACGGGGACAACGTCAGAAGAGATGAAAGTGACTTTGGCCACCATGCATCTTACTGATGATGCAAAGCTGTGGTGGAGATCTAAAGTCAACGACATTCAGAATGGTCGATGCACGATCAATAGCTGGGATGATCTGAAGAAAGAATTGAGGGGTCAGTTCTTCCCCGACAATGTCGAGTTCATGGCTAGAAGGAAGCTACGTGAACTCCGACACACTGGAACAATCTGGGACTACGTGAAACAATTCTCTGTCGTGATGCTGGATATTCGCGACATGTCAGAGAAAGACAAGGTGTTCGTCTTTATCGAAGGATTGAAACCGTGA
Protein sequence
MSATKQLSKSHVDRLVEIEEQLLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLPIQDIAMRVETLESKATRPGSFERGDSSTNPNTQIEVRMGELNNSHSAMMQLFNEMTEDFKAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMKVTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIWDYVKQFSVVMLDIRDMSEKDKVFVFIEGLKP
Homology
BLAST of Moc06g05100 vs. NCBI nr
Match:
XP_022150099.1 (uncharacterized protein LOC111018360 [Momordica charantia])
HSP 1 Score: 508.8 bits (1309), Expect = 2.8e-140
Identity = 261/295 (88.47%), Postives = 264/295 (89.49%), Query Frame = 0
Query: 1 MSATKQLSKSHVDRLVEIEEQLLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLP 60
MS TKQLSKSHVDRLVEIEEQLLYLREVPD LRLLEARVDEFSEKFGEIDAVNAR+DGLP
Sbjct: 1 MSTTKQLSKSHVDRLVEIEEQLLYLREVPDFLRLLEARVDEFSEKFGEIDAVNARIDGLP 60
Query: 61 IQDIAMRVETLESKATRPGSFERGDSSTNPNTQIEVRMGELNNSHSAMMQLFNEMTEDFK 120
IQDIAMRVETLESKATRPGSFERGDSSTNPNTQIEVRMGELNNSHSAMMQLFNEMTEDFK
Sbjct: 61 IQDIAMRVETLESKATRPGSFERGDSSTNPNTQIEVRMGELNNSHSAMMQLFNEMTEDFK 120
Query: 121 ---------------------------APNQANMGFNKLKVPEPKPFNGNRDAKDLENFL 180
APNQANMGFNKLKVPEPKPFNGNRDAKDLENFL
Sbjct: 121 VTIDTLRAEMTEISTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFL 180
Query: 181 FDVEQYFKATGTTSEEMKVTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRG 240
FDVEQYFKATGTTSEEMKVTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRG
Sbjct: 181 FDVEQYFKATGTTSEEMKVTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRG 240
Query: 241 QFFPDNVEFMARRKLRELRHTGTIWDYVKQFSVVMLDIRDMSEKDKVFVFIEGLK 269
QFFPDNVEFMARRKLRELRHTGTI DYVKQFS VM+DIRDMSEKDKVFVFI+GLK
Sbjct: 241 QFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMMDIRDMSEKDKVFVFIZGLK 295
BLAST of Moc06g05100 vs. NCBI nr
Match:
XP_022154605.1 (uncharacterized protein LOC111021829 [Momordica charantia])
HSP 1 Score: 491.9 bits (1265), Expect = 3.5e-135
Identity = 256/295 (86.78%), Postives = 256/295 (86.78%), Query Frame = 0
Query: 1 MSATKQLSKSHVDRLVEIEEQLLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLP 60
MSATKQLSKSHVDRLVEIEEQLLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLP
Sbjct: 1 MSATKQLSKSHVDRLVEIEEQLLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLP 60
Query: 61 IQDIAMRVETLESKATRPGSFERGDSSTNPNTQIEVRMGELNNSHSAMMQLFNEMTEDFK 120
IQDIAMRVET ESKATRPGSFERGDSSTNPNTQIEVRMGELNNSHS MMQLFNEMTEDFK
Sbjct: 61 IQDIAMRVETXESKATRPGSFERGDSSTNPNTQIEVRMGELNNSHSTMMQLFNEMTEDFK 120
Query: 121 ---------------------------APNQANMGFNKLKVPEPKPFNGNRDAKDLENFL 180
APNQ NMGFNKLKVPEPKPFNGNR KDLENF
Sbjct: 121 VTIDTLRAEMTEISTRVNLTMRAVGNQAPNQXNMGFNKLKVPEPKPFNGNRXXKDLENFX 180
Query: 181 FDVEQYFKATGTTSEEMKVTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRG 240
FDVEQYFK TGT SE MKVTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRG
Sbjct: 181 FDVEQYFKXTGTXSEXMKVTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRG 240
Query: 241 QFFPDNVEFMARRKLRELRHTGTIWDYVKQFSVVMLDIRDMSEKDKVFVFIEGLK 269
QFF DNVEFMARRKLRELRHTGTI DYVKQFS VMLDIRDMSEKDKVFVFIEGLK
Sbjct: 241 QFFLDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLK 295
BLAST of Moc06g05100 vs. NCBI nr
Match:
KAA0057594.1 (uncharacterized protein E6C27_scaffold497G00710 [Cucumis melo var. makuwa])
HSP 1 Score: 327.8 bits (839), Expect = 8.8e-86
Identity = 169/298 (56.71%), Postives = 215/298 (72.15%), Query Frame = 0
Query: 1 MSATKQLSKSHVDRLVEIEEQLLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLP 60
M ++ K+ DRLVEIEEQ+LYL EVPDS+R LE+RVDE SEK IDAV RV+GLP
Sbjct: 1 MLSSNPSGKAQRDRLVEIEEQMLYLVEVPDSIRYLESRVDEISEKANMIDAVAGRVEGLP 60
Query: 61 IQDIAMRVETLE--SKATRPGSFERGDSSTNPNTQIEVRMGELNNSHSAMMQLFNEMTED 120
IQ++ RV+ LE + A R ++ERG+SS+ +E R+ EL+N+ ++++ N+M+ED
Sbjct: 61 IQELLARVDALEENTNARRTINYERGESSSGFAAHMEERVDELDNAQKTLLEMINDMSED 120
Query: 121 FK---------------------------APNQANMGFNKLKVPEPKPFNGNRDAKDLEN 180
F+ AP + +K+KVPEPKPF G RDAK LEN
Sbjct: 121 FRVTLDVVRNEIADVNARLSLTMRAMASQAPVGGAISVSKVKVPEPKPFCGVRDAKALEN 180
Query: 181 FLFDVEQYFKATGTTSEEMKVTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKEL 240
++FD+EQYFKAT T +EE KVTLATMHL++DAKLWWRS+ DIQ GRCT+++WD LK+EL
Sbjct: 181 YIFDLEQYFKATNTVTEEAKVTLATMHLSEDAKLWWRSRYVDIQEGRCTVDTWDALKREL 240
Query: 241 RGQFFPDNVEFMARRKLRELRHTGTIWDYVKQFSVVMLDIRDMSEKDKVFVFIEGLKP 270
R QFFPDNVE +ARRKLR+LRHTG IW+YVKQF+ +MLDIRDMSEKDKVF F+EGLKP
Sbjct: 241 RSQFFPDNVEILARRKLRDLRHTGEIWEYVKQFAGLMLDIRDMSEKDKVFYFVEGLKP 298
BLAST of Moc06g05100 vs. NCBI nr
Match:
TYK21000.1 (uncharacterized protein E5676_scaffold328G00270 [Cucumis melo var. makuwa])
HSP 1 Score: 327.8 bits (839), Expect = 8.8e-86
Identity = 169/298 (56.71%), Postives = 215/298 (72.15%), Query Frame = 0
Query: 1 MSATKQLSKSHVDRLVEIEEQLLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLP 60
M ++ K+ DRLVEIEEQ+LYL EVPDS+R LE+RVDE SEK IDAV RV+GLP
Sbjct: 1 MLSSNPSGKAQRDRLVEIEEQMLYLVEVPDSIRYLESRVDEISEKANMIDAVAGRVEGLP 60
Query: 61 IQDIAMRVETLE--SKATRPGSFERGDSSTNPNTQIEVRMGELNNSHSAMMQLFNEMTED 120
IQ++ RV+ LE + A R ++ERG+SS+ +E R+ EL+N+ ++++ N+M+ED
Sbjct: 61 IQELLARVDALEENTNARRTINYERGESSSGFAAHMEERVDELDNAQKTLLEMINDMSED 120
Query: 121 FK---------------------------APNQANMGFNKLKVPEPKPFNGNRDAKDLEN 180
F+ AP + +K+KVPEPKPF G RDAK LEN
Sbjct: 121 FRVTLDVVRNEIADVNARLSLTMRAMASQAPVGGAISVSKVKVPEPKPFCGVRDAKALEN 180
Query: 181 FLFDVEQYFKATGTTSEEMKVTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKEL 240
++FD+EQYFKAT T +EE KVTLATMHL++DAKLWWRS+ DIQ GRCT+++WD LK+EL
Sbjct: 181 YIFDLEQYFKATNTVTEEAKVTLATMHLSEDAKLWWRSRYVDIQEGRCTVDTWDALKREL 240
Query: 241 RGQFFPDNVEFMARRKLRELRHTGTIWDYVKQFSVVMLDIRDMSEKDKVFVFIEGLKP 270
R QFFPDNVE +ARRKLR+LRHTG IW+YVKQF+ +MLDIRDMSEKDKVF F+EGLKP
Sbjct: 241 RSQFFPDNVEILARRKLRDLRHTGEIWEYVKQFAGLMLDIRDMSEKDKVFYFVEGLKP 298
BLAST of Moc06g05100 vs. NCBI nr
Match:
TYK19839.1 (uncharacterized protein E5676_scaffold811G00460 [Cucumis melo var. makuwa])
HSP 1 Score: 325.9 bits (834), Expect = 3.4e-85
Identity = 169/298 (56.71%), Postives = 215/298 (72.15%), Query Frame = 0
Query: 1 MSATKQLSKSHVDRLVEIEEQLLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLP 60
MS++ K+ DRLVEIEEQ+LYL EVPDS+R LE+RVDE SEK IDAV RV+GLP
Sbjct: 1 MSSSNPSGKAQRDRLVEIEEQMLYLVEVPDSIRYLESRVDEISEKANMIDAVAGRVEGLP 60
Query: 61 IQDIAMRVETLE--SKATRPGSFERGDSSTNPNTQIEVRMGELNNSHSAMMQLFNEMTED 120
IQ++ RV+ LE + A R ++ERG+SS+ +E R+GEL+N+ ++++ N M+ED
Sbjct: 61 IQELLARVDALEENTNARRTINYERGESSSGLGAHMEERVGELDNAQKTLLEMINGMSED 120
Query: 121 FK---------------------------APNQANMGFNKLKVPEPKPFNGNRDAKDLEN 180
F+ AP + +K+KVPEPKPF G RDAK LEN
Sbjct: 121 FRVTLDVVRNEIADVNARLSLTMRAMANQAPAGGAISVSKVKVPEPKPFCGARDAKALEN 180
Query: 181 FLFDVEQYFKATGTTSEEMKVTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKEL 240
++FD+EQYFKAT T +EE KVTLATMHL++DAKLWWRS+ DIQ GRCT+++WD LK+EL
Sbjct: 181 YIFDLEQYFKATNTIAEEAKVTLATMHLSEDAKLWWRSRYVDIQEGRCTVDTWDALKREL 240
Query: 241 RGQFFPDNVEFMARRKLRELRHTGTIWDYVKQFSVVMLDIRDMSEKDKVFVFIEGLKP 270
R QFFP+NVE +ARRKLR+LRHTG I +YVKQF+ +MLDIRDMSEKDKVF F+EGLKP
Sbjct: 241 RSQFFPENVEILARRKLRDLRHTGEIREYVKQFAGLMLDIRDMSEKDKVFYFVEGLKP 298
BLAST of Moc06g05100 vs. ExPASy TrEMBL
Match:
A0A6J1D906 (Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1)
HSP 1 Score: 509.2 bits (1310), Expect = 1.0e-140
Identity = 262/295 (88.81%), Postives = 264/295 (89.49%), Query Frame = 0
Query: 1 MSATKQLSKSHVDRLVEIEEQLLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLP 60
MS TKQLSKSHVDRLVEIEEQLLYLREVPD LRLLEARVDEFSEKFGEIDAVNAR+DGLP
Sbjct: 1 MSTTKQLSKSHVDRLVEIEEQLLYLREVPDFLRLLEARVDEFSEKFGEIDAVNARIDGLP 60
Query: 61 IQDIAMRVETLESKATRPGSFERGDSSTNPNTQIEVRMGELNNSHSAMMQLFNEMTEDFK 120
IQDIAMRVETLESKATRPGSFERGDSSTNPNTQIEVRMGELNNSHSAMMQLFNEMTEDFK
Sbjct: 61 IQDIAMRVETLESKATRPGSFERGDSSTNPNTQIEVRMGELNNSHSAMMQLFNEMTEDFK 120
Query: 121 ---------------------------APNQANMGFNKLKVPEPKPFNGNRDAKDLENFL 180
APNQANMGFNKLKVPEPKPFNGNRDAKDLENFL
Sbjct: 121 VTIDTLRAEMTEISTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFL 180
Query: 181 FDVEQYFKATGTTSEEMKVTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRG 240
FDVEQYFKATGTTSEEMKVTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRG
Sbjct: 181 FDVEQYFKATGTTSEEMKVTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRG 240
Query: 241 QFFPDNVEFMARRKLRELRHTGTIWDYVKQFSVVMLDIRDMSEKDKVFVFIEGLK 269
QFFPDNVEFMARRKLRELRHTGTI DYVKQFS VM+DIRDMSEKDKVFVFIEGLK
Sbjct: 241 QFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMMDIRDMSEKDKVFVFIEGLK 295
BLAST of Moc06g05100 vs. ExPASy TrEMBL
Match:
A0A6J1DK29 (uncharacterized protein LOC111021829 OS=Momordica charantia OX=3673 GN=LOC111021829 PE=4 SV=1)
HSP 1 Score: 491.9 bits (1265), Expect = 1.7e-135
Identity = 256/295 (86.78%), Postives = 256/295 (86.78%), Query Frame = 0
Query: 1 MSATKQLSKSHVDRLVEIEEQLLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLP 60
MSATKQLSKSHVDRLVEIEEQLLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLP
Sbjct: 1 MSATKQLSKSHVDRLVEIEEQLLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLP 60
Query: 61 IQDIAMRVETLESKATRPGSFERGDSSTNPNTQIEVRMGELNNSHSAMMQLFNEMTEDFK 120
IQDIAMRVET ESKATRPGSFERGDSSTNPNTQIEVRMGELNNSHS MMQLFNEMTEDFK
Sbjct: 61 IQDIAMRVETXESKATRPGSFERGDSSTNPNTQIEVRMGELNNSHSTMMQLFNEMTEDFK 120
Query: 121 ---------------------------APNQANMGFNKLKVPEPKPFNGNRDAKDLENFL 180
APNQ NMGFNKLKVPEPKPFNGNR KDLENF
Sbjct: 121 VTIDTLRAEMTEISTRVNLTMRAVGNQAPNQXNMGFNKLKVPEPKPFNGNRXXKDLENFX 180
Query: 181 FDVEQYFKATGTTSEEMKVTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRG 240
FDVEQYFK TGT SE MKVTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRG
Sbjct: 181 FDVEQYFKXTGTXSEXMKVTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRG 240
Query: 241 QFFPDNVEFMARRKLRELRHTGTIWDYVKQFSVVMLDIRDMSEKDKVFVFIEGLK 269
QFF DNVEFMARRKLRELRHTGTI DYVKQFS VMLDIRDMSEKDKVFVFIEGLK
Sbjct: 241 QFFLDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLK 295
BLAST of Moc06g05100 vs. ExPASy TrEMBL
Match:
A0A5D3DC04 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold328G00270 PE=4 SV=1)
HSP 1 Score: 327.8 bits (839), Expect = 4.3e-86
Identity = 169/298 (56.71%), Postives = 215/298 (72.15%), Query Frame = 0
Query: 1 MSATKQLSKSHVDRLVEIEEQLLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLP 60
M ++ K+ DRLVEIEEQ+LYL EVPDS+R LE+RVDE SEK IDAV RV+GLP
Sbjct: 1 MLSSNPSGKAQRDRLVEIEEQMLYLVEVPDSIRYLESRVDEISEKANMIDAVAGRVEGLP 60
Query: 61 IQDIAMRVETLE--SKATRPGSFERGDSSTNPNTQIEVRMGELNNSHSAMMQLFNEMTED 120
IQ++ RV+ LE + A R ++ERG+SS+ +E R+ EL+N+ ++++ N+M+ED
Sbjct: 61 IQELLARVDALEENTNARRTINYERGESSSGFAAHMEERVDELDNAQKTLLEMINDMSED 120
Query: 121 FK---------------------------APNQANMGFNKLKVPEPKPFNGNRDAKDLEN 180
F+ AP + +K+KVPEPKPF G RDAK LEN
Sbjct: 121 FRVTLDVVRNEIADVNARLSLTMRAMASQAPVGGAISVSKVKVPEPKPFCGVRDAKALEN 180
Query: 181 FLFDVEQYFKATGTTSEEMKVTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKEL 240
++FD+EQYFKAT T +EE KVTLATMHL++DAKLWWRS+ DIQ GRCT+++WD LK+EL
Sbjct: 181 YIFDLEQYFKATNTVTEEAKVTLATMHLSEDAKLWWRSRYVDIQEGRCTVDTWDALKREL 240
Query: 241 RGQFFPDNVEFMARRKLRELRHTGTIWDYVKQFSVVMLDIRDMSEKDKVFVFIEGLKP 270
R QFFPDNVE +ARRKLR+LRHTG IW+YVKQF+ +MLDIRDMSEKDKVF F+EGLKP
Sbjct: 241 RSQFFPDNVEILARRKLRDLRHTGEIWEYVKQFAGLMLDIRDMSEKDKVFYFVEGLKP 298
BLAST of Moc06g05100 vs. ExPASy TrEMBL
Match:
A0A5A7UR61 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G00710 PE=4 SV=1)
HSP 1 Score: 327.8 bits (839), Expect = 4.3e-86
Identity = 169/298 (56.71%), Postives = 215/298 (72.15%), Query Frame = 0
Query: 1 MSATKQLSKSHVDRLVEIEEQLLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLP 60
M ++ K+ DRLVEIEEQ+LYL EVPDS+R LE+RVDE SEK IDAV RV+GLP
Sbjct: 1 MLSSNPSGKAQRDRLVEIEEQMLYLVEVPDSIRYLESRVDEISEKANMIDAVAGRVEGLP 60
Query: 61 IQDIAMRVETLE--SKATRPGSFERGDSSTNPNTQIEVRMGELNNSHSAMMQLFNEMTED 120
IQ++ RV+ LE + A R ++ERG+SS+ +E R+ EL+N+ ++++ N+M+ED
Sbjct: 61 IQELLARVDALEENTNARRTINYERGESSSGFAAHMEERVDELDNAQKTLLEMINDMSED 120
Query: 121 FK---------------------------APNQANMGFNKLKVPEPKPFNGNRDAKDLEN 180
F+ AP + +K+KVPEPKPF G RDAK LEN
Sbjct: 121 FRVTLDVVRNEIADVNARLSLTMRAMASQAPVGGAISVSKVKVPEPKPFCGVRDAKALEN 180
Query: 181 FLFDVEQYFKATGTTSEEMKVTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKEL 240
++FD+EQYFKAT T +EE KVTLATMHL++DAKLWWRS+ DIQ GRCT+++WD LK+EL
Sbjct: 181 YIFDLEQYFKATNTVTEEAKVTLATMHLSEDAKLWWRSRYVDIQEGRCTVDTWDALKREL 240
Query: 241 RGQFFPDNVEFMARRKLRELRHTGTIWDYVKQFSVVMLDIRDMSEKDKVFVFIEGLKP 270
R QFFPDNVE +ARRKLR+LRHTG IW+YVKQF+ +MLDIRDMSEKDKVF F+EGLKP
Sbjct: 241 RSQFFPDNVEILARRKLRDLRHTGEIWEYVKQFAGLMLDIRDMSEKDKVFYFVEGLKP 298
BLAST of Moc06g05100 vs. ExPASy TrEMBL
Match:
A0A5D3D8P6 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold811G00460 PE=4 SV=1)
HSP 1 Score: 325.9 bits (834), Expect = 1.6e-85
Identity = 169/298 (56.71%), Postives = 215/298 (72.15%), Query Frame = 0
Query: 1 MSATKQLSKSHVDRLVEIEEQLLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLP 60
MS++ K+ DRLVEIEEQ+LYL EVPDS+R LE+RVDE SEK IDAV RV+GLP
Sbjct: 1 MSSSNPSGKAQRDRLVEIEEQMLYLVEVPDSIRYLESRVDEISEKANMIDAVAGRVEGLP 60
Query: 61 IQDIAMRVETLE--SKATRPGSFERGDSSTNPNTQIEVRMGELNNSHSAMMQLFNEMTED 120
IQ++ RV+ LE + A R ++ERG+SS+ +E R+GEL+N+ ++++ N M+ED
Sbjct: 61 IQELLARVDALEENTNARRTINYERGESSSGLGAHMEERVGELDNAQKTLLEMINGMSED 120
Query: 121 FK---------------------------APNQANMGFNKLKVPEPKPFNGNRDAKDLEN 180
F+ AP + +K+KVPEPKPF G RDAK LEN
Sbjct: 121 FRVTLDVVRNEIADVNARLSLTMRAMANQAPAGGAISVSKVKVPEPKPFCGARDAKALEN 180
Query: 181 FLFDVEQYFKATGTTSEEMKVTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKEL 240
++FD+EQYFKAT T +EE KVTLATMHL++DAKLWWRS+ DIQ GRCT+++WD LK+EL
Sbjct: 181 YIFDLEQYFKATNTIAEEAKVTLATMHLSEDAKLWWRSRYVDIQEGRCTVDTWDALKREL 240
Query: 241 RGQFFPDNVEFMARRKLRELRHTGTIWDYVKQFSVVMLDIRDMSEKDKVFVFIEGLKP 270
R QFFP+NVE +ARRKLR+LRHTG I +YVKQF+ +MLDIRDMSEKDKVF F+EGLKP
Sbjct: 241 RSQFFPENVEILARRKLRDLRHTGEIREYVKQFAGLMLDIRDMSEKDKVFYFVEGLKP 298
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022150099.1 | 2.8e-140 | 88.47 | uncharacterized protein LOC111018360 [Momordica charantia] | [more] |
XP_022154605.1 | 3.5e-135 | 86.78 | uncharacterized protein LOC111021829 [Momordica charantia] | [more] |
KAA0057594.1 | 8.8e-86 | 56.71 | uncharacterized protein E6C27_scaffold497G00710 [Cucumis melo var. makuwa] | [more] |
TYK21000.1 | 8.8e-86 | 56.71 | uncharacterized protein E5676_scaffold328G00270 [Cucumis melo var. makuwa] | [more] |
TYK19839.1 | 3.4e-85 | 56.71 | uncharacterized protein E5676_scaffold811G00460 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1D906 | 1.0e-140 | 88.81 | Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1 | [more] |
A0A6J1DK29 | 1.7e-135 | 86.78 | uncharacterized protein LOC111021829 OS=Momordica charantia OX=3673 GN=LOC111021... | [more] |
A0A5D3DC04 | 4.3e-86 | 56.71 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A5A7UR61 | 4.3e-86 | 56.71 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A5D3D8P6 | 1.6e-85 | 56.71 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
Match Name | E-value | Identity | Description | |