Moc05g33820 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g33820
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Leukocyte immunoglobulin-like receptor subfamily A member
Location	chr5: 25219404 .. 25219757 (-)
RNA-Seq Expression	Moc05g33820
Synteny	Moc05g33820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTGGTTAAGAAATTTGGGGACGAACACAGCAACTTGTTGGACCAATATGAGAGAGTGAGCTTCGAAGCGAGACTGAAGGAAGCAATGCTGGGGCGAAGTCTTTCGGAGCCGAGGACGATGAGGTCTCAGCCGCAACTACTTACAGCTTCAGTTGCAGTTGGACCACCATACAATTACAGATACCAGGATCAGCCCAGAAAAGCCACCTTCAACTTCAACAAGATTATCAACAAGTTACTCAAACCCATTTTGCACAGAAAGAGTAGGGCTAGGGCAACGGCGAAGGAGTTTCCAGATTTTAAAAATCCCATGTCTTGGAAAGCCCTCAGTAAATCCATGCGCCTTTGA

mRNA sequence

ATGGCAGTGGTTAAGAAATTTGGGGACGAACACAGCAACTTGTTGGACCAATATGAGAGAGTGAGCTTCGAAGCGAGACTGAAGGAAGCAATGCTGGGGCGAAGTCTTTCGGAGCCGAGGACGATGAGGTCTCAGCCGCAACTACTTACAGCTTCAGTTGCAGTTGGACCACCATACAATTACAGATACCAGGATCAGCCCAGAAAAGCCACCTTCAACTTCAACAAGATTATCAACAAGTTACTCAAACCCATTTTGCACAGAAAGAGTAGGGCTAGGGCAACGGCGAAGGAGTTTCCAGATTTTAAAAATCCCATGTCTTGGAAAGCCCTCAGTAAATCCATGCGCCTTTGA

Coding sequence (CDS)

ATGGCAGTGGTTAAGAAATTTGGGGACGAACACAGCAACTTGTTGGACCAATATGAGAGAGTGAGCTTCGAAGCGAGACTGAAGGAAGCAATGCTGGGGCGAAGTCTTTCGGAGCCGAGGACGATGAGGTCTCAGCCGCAACTACTTACAGCTTCAGTTGCAGTTGGACCACCATACAATTACAGATACCAGGATCAGCCCAGAAAAGCCACCTTCAACTTCAACAAGATTATCAACAAGTTACTCAAACCCATTTTGCACAGAAAGAGTAGGGCTAGGGCAACGGCGAAGGAGTTTCCAGATTTTAAAAATCCCATGTCTTGGAAAGCCCTCAGTAAATCCATGCGCCTTTGA

Protein sequence

MAVVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYRYQDQPRKATFNFNKIINKLLKPILHRKSRARATAKEFPDFKNPMSWKALSKSMRL

Homology

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BLAST of Moc05g33820 vs. NCBI nr
Match: KAG6580428.1 (hypothetical protein SDJN03_20430, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 152.9 bits (385), Expect = 1.7e-33
Identity = 87/125 (69.60%), Postives = 97/125 (77.60%), Query Frame = 0


Query: 1   MAVVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRS----QPQLLTASVAVG 60
           MAVVKKFGDEHSNLLDQYER SFEARL +A+LGRSLSEPRT+RS    QPQL  +     
Sbjct: 1   MAVVKKFGDEHSNLLDQYERRSFEARLNQAILGRSLSEPRTLRSQQQPQPQLSASGSVRL 60

Query: 61  PPYNYRYQDQPRK----ATFNFNKIINKLLKPILHRKSRARATAKEFPDFKNPMSWKALS 118
           P       +QPRK    +TFNFNKIINKLLKPIL RKS++RA  KE PDF+NP+SWKALS
Sbjct: 61  PCLVTTSSNQPRKGGRGSTFNFNKIINKLLKPILGRKSKSRA-KKELPDFRNPVSWKALS 120

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BLAST of Moc05g33820 vs. NCBI nr
Match: XP_042940573.1 (uncharacterized protein LOC122275540 isoform X1 [Carya illinoinensis] >KAG6643576.1 hypothetical protein CIPAW_09G221400 [Carya illinoinensis])

HSP 1 Score: 100.5 bits (249), Expect = 1.0e-17
Identity = 55/114 (48.25%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 3   VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYR 62
           V++KFGDE S LLD++ER+SFE +L +A+LGRS SEP   R Q  L     A  PP   R
Sbjct: 135 VLRKFGDEQSTLLDRFERLSFEVQLNQAILGRSFSEPSVARFQAPLFGQGPAPPPP-PLR 194

Query: 63  YQDQPRKATFNFNKIINKLLKPILHRKSRARATAKEFPDFKNPMSWKALSKSMR 117
              + R+ +  F+K++ K LKPIL RKSR   +  + PD +NP SWKA S+S+R
Sbjct: 195 QAQRGRRGS-AFHKVLKKFLKPILGRKSRGGMSEVQLPDPRNPRSWKAFSRSLR 246

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BLAST of Moc05g33820 vs. NCBI nr
Match: XP_042940575.1 (uncharacterized protein LOC122275540 isoform X3 [Carya illinoinensis])

HSP 1 Score: 100.5 bits (249), Expect = 1.0e-17
Identity = 55/114 (48.25%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 3   VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYR 62
           V++KFGDE S LLD++ER+SFE +L +A+LGRS SEP   R Q  L     A  PP   R
Sbjct: 75  VLRKFGDEQSTLLDRFERLSFEVQLNQAILGRSFSEPSVARFQAPLFGQGPAPPPP-PLR 134

Query: 63  YQDQPRKATFNFNKIINKLLKPILHRKSRARATAKEFPDFKNPMSWKALSKSMR 117
              + R+ +  F+K++ K LKPIL RKSR   +  + PD +NP SWKA S+S+R
Sbjct: 135 QAQRGRRGS-AFHKVLKKFLKPILGRKSRGGMSEVQLPDPRNPRSWKAFSRSLR 186

[Close]

BLAST of Moc05g33820 vs. NCBI nr
Match: XP_042940574.1 (uncharacterized protein LOC122275540 isoform X2 [Carya illinoinensis])

HSP 1 Score: 100.5 bits (249), Expect = 1.0e-17
Identity = 55/114 (48.25%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 3   VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYR 62
           V++KFGDE S LLD++ER+SFE +L +A+LGRS SEP   R Q  L     A  PP   R
Sbjct: 127 VLRKFGDEQSTLLDRFERLSFEVQLNQAILGRSFSEPSVARFQAPLFGQGPAPPPP-PLR 186

Query: 63  YQDQPRKATFNFNKIINKLLKPILHRKSRARATAKEFPDFKNPMSWKALSKSMR 117
              + R+ +  F+K++ K LKPIL RKSR   +  + PD +NP SWKA S+S+R
Sbjct: 187 QAQRGRRGS-AFHKVLKKFLKPILGRKSRGGMSEVQLPDPRNPRSWKAFSRSLR 238

[Close]

BLAST of Moc05g33820 vs. NCBI nr
Match: KAG7965322.1 (hypothetical protein I3843_09G217500 [Carya illinoinensis])

HSP 1 Score: 99.8 bits (247), Expect = 1.7e-17
Identity = 55/114 (48.25%), Postives = 73/114 (64.04%), Query Frame = 0


Query: 3   VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYR 62
           V++KFGDE S LLD++ER+SFE +L +A+LGRS SEP   R Q  L     A  PP   R
Sbjct: 135 VLRKFGDEQSTLLDRFERLSFEVQLNQAILGRSFSEPSVARFQAPLFGQGPAPPPP-PLR 194

Query: 63  YQDQPRKATFNFNKIINKLLKPILHRKSRARATAKEFPDFKNPMSWKALSKSMR 117
              + R+ +  F+K++ K LKPIL RKSR      + PD +NP SWKA S+S+R
Sbjct: 195 QAQRGRRGS-AFHKVLKKFLKPILGRKSRGGMREVQLPDPRNPRSWKAFSRSLR 246

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BLAST of Moc05g33820 vs. ExPASy TrEMBL
Match: A0A7J0E7R3 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_02g0006800 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.1e-17
Identity = 58/118 (49.15%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 3   VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYR 62
           ++K+FGDE S LLDQ+ER++FEA+L  A+LGRSLSEP + R+QP LL   +A  P     
Sbjct: 10  ILKRFGDEQSTLLDQFERLAFEAQLSRAILGRSLSEPSSYRTQPPLLL--LAPPPGMAVA 69

Query: 63  YQDQP---RKATFNFNKIINKLLKPILHRKSRARATAKEFPDFKNPMSWKALSKSMRL 118
            Q +P   R A   F K++  LLKPIL R+   R   KE PD K+P  WK+ S+SMR+
Sbjct: 70  PQARPGGRRGARLGFKKVLKSLLKPILRRRPGGR---KEGPDPKDPRLWKSFSRSMRV 122

[Close]

BLAST of Moc05g33820 vs. ExPASy TrEMBL
Match: A0A2R6RXK4 (Protein Wnt-3a like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc01873 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.1e-17
Identity = 58/118 (49.15%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 3   VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYR 62
           ++K+FGDE S LLDQ+ER++FEA+L  A+LGRSLSEP + R+QP LL   +A  P     
Sbjct: 10  ILKRFGDEQSTLLDQFERLAFEAQLSRAILGRSLSEPSSSRTQPPLLL--LAPPPGMAVA 69

Query: 63  YQDQPRK---ATFNFNKIINKLLKPILHRKSRARATAKEFPDFKNPMSWKALSKSMRL 118
            Q QP +   A   F K++  LLKPIL R+   R   KE PD K+P  WK+ S+SMR+
Sbjct: 70  PQAQPGRRCGAGLGFKKVLKSLLKPILRRRPGGR---KEGPDPKDPRLWKSFSRSMRV 122

[Close]

BLAST of Moc05g33820 vs. ExPASy TrEMBL
Match: A0A5N5N485 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_006765 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 9.1e-17
Identity = 58/123 (47.15%), Postives = 74/123 (60.16%), Query Frame = 0


Query: 3   VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYR 62
           V+K+FGDE S LLDQ+ER+SFE +L +AMLGRSLSEP   RSQ        +   P   +
Sbjct: 13  VLKRFGDEQSTLLDQFERLSFEVQLSQAMLGRSLSEPGASRSQ---FKGQASGAAPLAAQ 72

Query: 63  YQDQPRKATFNFNKIINKLLKPILHRKSR-------ARATAKE-FPDFKNPMSWKALSKS 118
            +   R+    F+K + KLLKPIL RK R       A A  KE   D K+P SWKA S+S
Sbjct: 73  VKQGSRRRGLGFDKFLKKLLKPILGRKRRGGGGGGGAAAAKKEGMADPKDPRSWKAFSRS 132

[Close]

BLAST of Moc05g33820 vs. ExPASy TrEMBL
Match: B9SRS7 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1057740 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.2e-16
Identity = 60/124 (48.39%), Postives = 77/124 (62.10%), Query Frame = 0


Query: 3   VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYR 62
           V+K FGD+ S LLDQ+ER+SFE +L +AMLGRSLSEP   RS+ Q      A  PP   +
Sbjct: 7   VLKTFGDDQSTLLDQFERLSFEVQLNQAMLGRSLSEPGVGRSRFQPPLNREAPPPPALVK 66

Query: 63  YQ-DQPRK--ATFNFNKIINKLLKPILHRKSRARATA------KEFPDFKNPMSWKALSK 118
            Q  Q R+   +  FN+++ KLLKPI  RK   +  A      +E PD KN  SWKALS+
Sbjct: 67  KQVRQGRRLGGSTGFNRMLKKLLKPIFSRKGAKKCAAFDDAVKREVPDPKNAKSWKALSR 126

[Close]

BLAST of Moc05g33820 vs. ExPASy TrEMBL
Match: A0A2R6RRV1 (Leukocyte immunoglobulin-like receptor subfamily A member OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc03052 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.2e-16
Identity = 57/118 (48.31%), Postives = 75/118 (63.56%), Query Frame = 0


Query: 3   VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYR 62
           ++++F DE S LLDQ+ER+S EA+L  A+LGRSLSEP T  +QP  L   +A  P     
Sbjct: 7   ILRRFEDEQSTLLDQFERLSLEAQLSRAILGRSLSEPSTSTNQPPQLL--LAPPPGMAVA 66

Query: 63  YQDQP---RKATFNFNKIINKLLKPILHRKSRARATAKEFPDFKNPMSWKALSKSMRL 118
            QDQP   R A   F K++ +L+KPIL R+   R   KE PD K+P  WKA S+SMR+
Sbjct: 67  QQDQPGRRRGAGSGFKKVMKRLIKPILRRRPGGR---KEGPDPKDPRLWKAFSRSMRV 119

The following BLAST results are available for this feature:

BLAST of Moc05g33820 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6580428.1	1.7e-33	69.60	hypothetical protein SDJN03_20430, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_042940573.1	1.0e-17	48.25	uncharacterized protein LOC122275540 isoform X1 [Carya illinoinensis] >KAG664357...	[more]
XP_042940575.1	1.0e-17	48.25	uncharacterized protein LOC122275540 isoform X3 [Carya illinoinensis]	[more]
XP_042940574.1	1.0e-17	48.25	uncharacterized protein LOC122275540 isoform X2 [Carya illinoinensis]	[more]
KAG7965322.1	1.7e-17	48.25	hypothetical protein I3843_09G217500 [Carya illinoinensis]	[more]

BLAST of Moc05g33820 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g33820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J0E7R3	1.1e-17	49.15	Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_02g0006800 PE=4 SV=1	[more]
A0A2R6RXK4	1.1e-17	49.15	Protein Wnt-3a like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Ac...	[more]
A0A5N5N485	9.1e-17	47.15	Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_006765 PE=4 SV=1	[more]
B9SRS7	1.2e-16	48.39	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1057740 PE=4 SV=1	[more]
A0A2R6RRV1	1.2e-16	48.31	Leukocyte immunoglobulin-like receptor subfamily A member OS=Actinidia chinensis...	[more]

BLAST of Moc05g33820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR48196	FAMILY NOT NAMED	coord: 2..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g33820.1	Moc05g33820.1	mRNA