Moc05g32660 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCGACAACAAACCAATTGGCCATTCTTCCAATCACATTTTCGCCTCTTTACTCCAAGTATGCCTCTACTTTTCTTTCCTTTCTCCAACAACTTTATATTATTATTATTATTTTTTTTTTTTAGAGAGTTCAATTTCACCCCACTTCTTATTCGAGCTCAAATCGAAAAAAATAGTTATCAAGATTATGAATCTCTTTTTATATTATTAAAAATGGTATACGCATGGTATTGTCTATTTAATACTATTATTTTACTTTAGGATCACAAGATGTTACTTATATCAATACAATAATGATTTATTTGCACTATTAATATTAATAATTAGGAACATGAGTGTGAATTTAGTTTGACAGTAATTGACATATTCTCGAAAAAAAAAATCATCCGTTTAAATTTTCTAATAGAGGATTTAAATTCTCCCTCGCAAAAAAGTCTCCTATTGGGCGGTGGCCTTTTAAGTCAAATTTGGGGGTTTGCCTGATTCCTTGTCTTTTTCTCAGCGCTCCGAAGTCGATGGGAAAAGAGAAGAAATTCCATGGCACCCCAAGACTGGTTCGTTGCGTTACTCTGTTCGTATCTAATTTTTTGCTAGTAAAATGGAAGTGATAAGTTATTGGGAGCCTGTTGTCTCTGCAGAATCAAACTCCAAGAGTAAGGAAACGAAGAGCCAGAACACATCAAGCAGAGAAGCGAGTTCGTTTAATCAGGAACAAATTGCACACCCATGTCATCTTAGTTCTTCAATCTACTATGGTGGTCAGGATGTGTATCCCCACCCCCACAATACCCAAAACCCTGCAACTGGATTGAACTCTTCCGTGAGTATTGTGGCATTATTTTCCGCAAACCCCACTCTTTTGTTCTGAAGAATCTATTAATTTGCATTGGGACTTTTTCAGATTAAGAAAGATGGGGAAGAAGATGATGATGATTCGGGTGGTGCTTCCAGAGGAAACTGGTGGAAAGGTACGTGATGCAGATGAGGTGTTTGATGAAATGTCACAACTAAAATTCTTTCGCTGCAGAGTCCGAAGATTCACTTACATTTTTATTTTCGAAAAATGCAGGCTCTCTCTACTACTGA ATGTCCGACAACAAACCAATTGGCCATTCTTCCAATCACATTTTCGCCTCTTTACTCCAACGCTCCGAAGTCGATGGGAAAAGAGAAGAAATTCCATGGCACCCCAAGACTGAATCAAACTCCAAGAGTAAGGAAACGAAGAGCCAGAACACATCAAGCAGAGAAGCGAGTTCGTTTAATCAGGAACAAATTGCACACCCATGTCATCTTAGTTCTTCAATCTACTATGGTGGTCAGGATGTGTATCCCCACCCCCACAATACCCAAAACCCTGCAACTGGATTGAACTCTTCCATTAAGAAAGATGGGGAAGAAGATGATGATGATTCGGGTGGTGCTTCCAGAGGAAACTGGTGGAAAGGCTCTCTCTACTACTGA ATGTCCGACAACAAACCAATTGGCCATTCTTCCAATCACATTTTCGCCTCTTTACTCCAACGCTCCGAAGTCGATGGGAAAAGAGAAGAAATTCCATGGCACCCCAAGACTGAATCAAACTCCAAGAGTAAGGAAACGAAGAGCCAGAACACATCAAGCAGAGAAGCGAGTTCGTTTAATCAGGAACAAATTGCACACCCATGTCATCTTAGTTCTTCAATCTACTATGGTGGTCAGGATGTGTATCCCCACCCCCACAATACCCAAAACCCTGCAACTGGATTGAACTCTTCCATTAAGAAAGATGGGGAAGAAGATGATGATGATTCGGGTGGTGCTTCCAGAGGAAACTGGTGGAAAGGCTCTCTCTACTACTGA MSDNKPIGHSSNHIFASLLQRSEVDGKREEIPWHPKTESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGSLYY Homology
BLAST of Moc05g32660 vs. NCBI nr
Match: XP_022145691.1 (uncharacterized protein LOC111015084 [Momordica charantia]) HSP 1 Score: 179.9 bits (455), Expect = 1.4e-41 Identity = 90/95 (94.74%), Postives = 90/95 (94.74%), Query Frame = 0
BLAST of Moc05g32660 vs. NCBI nr
Match: XP_016899678.1 (PREDICTED: uncharacterized protein LOC103486348 isoform X3 [Cucumis melo]) HSP 1 Score: 133.7 bits (335), Expect = 1.1e-27 Identity = 75/123 (60.98%), Postives = 87/123 (70.73%), Query Frame = 0
BLAST of Moc05g32660 vs. NCBI nr
Match: XP_004137753.1 (uncharacterized protein LOC101220657 isoform X1 [Cucumis sativus] >KGN58824.1 hypothetical protein Csa_002437 [Cucumis sativus]) HSP 1 Score: 132.9 bits (333), Expect = 1.9e-27 Identity = 76/124 (61.29%), Postives = 86/124 (69.35%), Query Frame = 0
BLAST of Moc05g32660 vs. NCBI nr
Match: XP_008442495.1 (PREDICTED: uncharacterized protein LOC103486348 isoform X1 [Cucumis melo] >XP_008442496.1 PREDICTED: uncharacterized protein LOC103486348 isoform X1 [Cucumis melo] >KAA0044127.1 uncharacterized protein E6C27_scaffold236G004800 [Cucumis melo var. makuwa] >TYK25011.1 uncharacterized protein E5676_scaffold352G001290 [Cucumis melo var. makuwa]) HSP 1 Score: 132.9 bits (333), Expect = 1.9e-27 Identity = 75/126 (59.52%), Postives = 86/126 (68.25%), Query Frame = 0
BLAST of Moc05g32660 vs. NCBI nr
Match: XP_016899679.1 (PREDICTED: uncharacterized protein LOC103486348 isoform X4 [Cucumis melo]) HSP 1 Score: 127.9 bits (320), Expect = 6.2e-26 Identity = 75/123 (60.98%), Postives = 86/123 (69.92%), Query Frame = 0
BLAST of Moc05g32660 vs. ExPASy TrEMBL
Match: A0A6J1CX28 (uncharacterized protein LOC111015084 OS=Momordica charantia OX=3673 GN=LOC111015084 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 6.7e-42 Identity = 90/95 (94.74%), Postives = 90/95 (94.74%), Query Frame = 0
BLAST of Moc05g32660 vs. ExPASy TrEMBL
Match: A0A1S4DUN5 (uncharacterized protein LOC103486348 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103486348 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 5.5e-28 Identity = 75/123 (60.98%), Postives = 87/123 (70.73%), Query Frame = 0
BLAST of Moc05g32660 vs. ExPASy TrEMBL
Match: A0A1S3B5B7 (uncharacterized protein LOC103486348 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486348 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 9.4e-28 Identity = 75/126 (59.52%), Postives = 86/126 (68.25%), Query Frame = 0
BLAST of Moc05g32660 vs. ExPASy TrEMBL
Match: A0A5D3DN19 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001290 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 9.4e-28 Identity = 75/126 (59.52%), Postives = 86/126 (68.25%), Query Frame = 0
BLAST of Moc05g32660 vs. ExPASy TrEMBL
Match: A0A0A0LD07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733290 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 9.4e-28 Identity = 76/124 (61.29%), Postives = 86/124 (69.35%), Query Frame = 0
BLAST of Moc05g32660 vs. TAIR 10
Match: AT5G02020.1 (Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). ) HSP 1 Score: 80.1 bits (196), Expect = 1.4e-15 Identity = 47/93 (50.54%), Postives = 58/93 (62.37%), Query Frame = 0
BLAST of Moc05g32660 vs. TAIR 10
Match: AT3G55646.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39855.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 70.9 bits (172), Expect = 8.4e-13 Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 0
BLAST of Moc05g32660 vs. TAIR 10
Match: AT2G39855.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55646.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 65.5 bits (158), Expect = 3.5e-11 Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 0
BLAST of Moc05g32660 vs. TAIR 10
Match: AT5G59080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 60.5 bits (145), Expect = 1.1e-09 Identity = 38/94 (40.43%), Postives = 49/94 (52.13%), Query Frame = 0
BLAST of Moc05g32660 vs. TAIR 10
Match: AT5G02020.2 (Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). ) HSP 1 Score: 45.8 bits (107), Expect = 2.9e-05 Identity = 25/61 (40.98%), Postives = 35/61 (57.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|