Moc05g32480 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g32480
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Legume-specific protein
Location	chr5: 24301840 .. 24302118 (+)
RNA-Seq Expression	Moc05g32480
Synteny	Moc05g32480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGTCTTATTCCCTTTGTTTACAAAGCGATTGTGCAGTACAAGACTGAAAAACAGGTGCCGGCGCTCCGGTCATGGCTCGGCGATTCGCCGTCGGCTTCCTATATCAGACTTCCGAGCGGTGATTCCGGCCGGTTTCAATTGCAATCGGACGGCTCTTATTCCGCCTCGTCGCCTTCTTCGAAACCAGCCTCTTCCACGGCCGCCCAGATTCTCGTTTCTACCGGCGTTCAGTCGCCGCTCCGCCATCTGACGCCTCGTCGAGTTGCCGCCTGA

mRNA sequence

ATGGAAGGTCTTATTCCCTTTGTTTACAAAGCGATTGTGCAGTACAAGACTGAAAAACAGGTGCCGGCGCTCCGGTCATGGCTCGGCGATTCGCCGTCGGCTTCCTATATCAGACTTCCGAGCGGTGATTCCGGCCGGTTTCAATTGCAATCGGACGGCTCTTATTCCGCCTCGTCGCCTTCTTCGAAACCAGCCTCTTCCACGGCCGCCCAGATTCTCGTTTCTACCGGCGTTCAGTCGCCGCTCCGCCATCTGACGCCTCGTCGAGTTGCCGCCTGA

Coding sequence (CDS)

ATGGAAGGTCTTATTCCCTTTGTTTACAAAGCGATTGTGCAGTACAAGACTGAAAAACAGGTGCCGGCGCTCCGGTCATGGCTCGGCGATTCGCCGTCGGCTTCCTATATCAGACTTCCGAGCGGTGATTCCGGCCGGTTTCAATTGCAATCGGACGGCTCTTATTCCGCCTCGTCGCCTTCTTCGAAACCAGCCTCTTCCACGGCCGCCCAGATTCTCGTTTCTACCGGCGTTCAGTCGCCGCTCCGCCATCTGACGCCTCGTCGAGTTGCCGCCTGA

Protein sequence

MEGLIPFVYKAIVQYKTEKQVPALRSWLGDSPSASYIRLPSGDSGRFQLQSDGSYSASSPSSKPASSTAAQILVSTGVQSPLRHLTPRRVAA

Homology

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BLAST of Moc05g32480 vs. NCBI nr
Match: KAG7017269.1 (hypothetical protein SDJN02_19132, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 150.2 bits (378), Expect = 8.6e-33
Identity = 79/92 (85.87%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKTEKQVPALRSWLGDSPSASYIRLPSGDSGRFQLQSDGSYSASSP 60
          MEG+IPFVYKAIVQYK EKQVPA+RSWL DSPS SYIRLPSGDSGRFQ   DGSYSA+SP
Sbjct: 1  MEGIIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQ---DGSYSAASP 60

Query: 61 SSKPASSTAAQILVSTGVQSPLRHLTPRRVAA 93
          SSK ASST  QIL+STGVQSPLRHLTPRRVAA
Sbjct: 61 SSKSASSTTTQILISTGVQSPLRHLTPRRVAA 89

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BLAST of Moc05g32480 vs. NCBI nr
Match: KAG6580521.1 (hypothetical protein SDJN03_20523, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 148.7 bits (374), Expect = 2.5e-32
Identity = 78/92 (84.78%), Postives = 82/92 (89.13%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKTEKQVPALRSWLGDSPSASYIRLPSGDSGRFQLQSDGSYSASSP 60
          MEG+IPFVYKAIVQYK EKQVPA+RSWL DSPS SYIRLPSGDSGRFQ   DGSYSA+SP
Sbjct: 1  MEGIIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQ---DGSYSAASP 60

Query: 61 SSKPASSTAAQILVSTGVQSPLRHLTPRRVAA 93
          SSK ASST  QIL+STGVQSPLRHLTPRRV A
Sbjct: 61 SSKSASSTTTQILISTGVQSPLRHLTPRRVVA 89

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BLAST of Moc05g32480 vs. NCBI nr
Match: KAA0044116.1 (legume-specific protein [Cucumis melo var. makuwa] >TYK25022.1 legume-specific protein [Cucumis melo var. makuwa])

HSP 1 Score: 140.2 bits (352), Expect = 8.9e-30
Identity = 76/92 (82.61%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKTEKQVPALRSWLGDSPSASYIRLPSGDSGRFQLQSDGSYSASSP 60
          MEGLIPFVYKAIVQYK EKQVPA+RSWL DSPS SYIRLPSGDSGRFQ QSD S S+ SP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60

Query: 61 SSKPASSTAAQILVSTGVQSPLRHLTPRRVAA 93
          +S   S+TA QILVSTGVQSPLRHLT RRVAA
Sbjct: 61 TS---STTATQILVSTGVQSPLRHLTTRRVAA 89

[Close]

BLAST of Moc05g32480 vs. NCBI nr
Match: KAG6596392.1 (hypothetical protein SDJN03_09572, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 137.9 bits (346), Expect = 4.4e-29
Identity = 73/92 (79.35%), Postives = 79/92 (85.87%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKTEKQVPALRSWLGDSPSASYIRLPSGDSGRFQLQSDGSYSASSP 60
          MEGLIPFVY+AIV YK +KQVP +RSWL DSPSASYIRLPSGDSGRF  QSDGSY+A+SP
Sbjct: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSDGSYTATSP 60

Query: 61 SSKPASSTAAQILVSTGVQSPLRHLTPRRVAA 93
           SK  SSTA QILV+TGVQSPLR L P RVAA
Sbjct: 61 -SKSVSSTATQILVATGVQSPLRQLAPSRVAA 91

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BLAST of Moc05g32480 vs. NCBI nr
Match: KAE8650999.1 (hypothetical protein Csa_002313 [Cucumis sativus])

HSP 1 Score: 135.2 bits (339), Expect = 2.9e-28
Identity = 75/91 (82.42%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 3   GLIPFVYKAIVQYKTEKQVPALRSWLGDSPSASYIRLPSGDSGRFQLQSDGSYSASSPSS 62
           GLIPFVYKAIVQYK EKQVPA+RSWL DSPS SYIRLPSGDSGRFQ QSD     +SPSS
Sbjct: 109 GLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSD-----ASPSS 168

Query: 63  K-PASSTAAQILVSTGVQSPLRHLTPRRVAA 93
           K P SST  QILVSTGVQSPLRHLT RRVAA
Sbjct: 169 KSPTSSTTTQILVSTGVQSPLRHLTTRRVAA 194

[Close]

BLAST of Moc05g32480 vs. ExPASy TrEMBL
Match: A0A5D3DNC7 (Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001410 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.3e-30
Identity = 76/92 (82.61%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKTEKQVPALRSWLGDSPSASYIRLPSGDSGRFQLQSDGSYSASSP 60
          MEGLIPFVYKAIVQYK EKQVPA+RSWL DSPS SYIRLPSGDSGRFQ QSD S S+ SP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60

Query: 61 SSKPASSTAAQILVSTGVQSPLRHLTPRRVAA 93
          +S   S+TA QILVSTGVQSPLRHLT RRVAA
Sbjct: 61 TS---STTATQILVSTGVQSPLRHLTTRRVAA 89

[Close]

BLAST of Moc05g32480 vs. ExPASy TrEMBL
Match: A0A0A0LD26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 9.6e-30
Identity = 77/93 (82.80%), Postives = 79/93 (84.95%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKTEKQVPALRSWLGDSPSASYIRLPSGDSGRFQLQSDGSYSASSP 60
          MEGLIPFVYKAIVQYK EKQVPA+RSWL DSPS SYIRLPSGDSGRFQ QSD     +SP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSD-----ASP 60

Query: 61 SSK-PASSTAAQILVSTGVQSPLRHLTPRRVAA 93
          SSK P SST  QILVSTGVQSPLRHLT RRVAA
Sbjct: 61 SSKSPTSSTTTQILVSTGVQSPLRHLTTRRVAA 88

[Close]

BLAST of Moc05g32480 vs. ExPASy TrEMBL
Match: K7MT87 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G187300 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.4e-20
Identity = 61/94 (64.89%), Postives = 76/94 (80.85%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKTEKQVPALRSWLGDSPSASYIRLPSGDSGRFQLQSD-GSYSASS 60
          MEGLIPFVYKAI+QYK +K    + SWL +SPS SY+RLP+GDSGRFQ+Q+   S+SA+S
Sbjct: 1  MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60

Query: 61 PSS-KPASSTAAQILVSTGVQSPLRHLTPRRVAA 93
          PSS  P SS+A QI+VS+GVQSP + LT RR+AA
Sbjct: 61 PSSTNPNSSSATQIIVSSGVQSPHQCLTHRRIAA 94

[Close]

BLAST of Moc05g32480 vs. ExPASy TrEMBL
Match: A0A0B2P904 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_048924 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.5e-19
Identity = 60/94 (63.83%), Postives = 75/94 (79.79%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKTEKQVPALRSWLGDSPSASYIRLPSGDSGRFQLQSD-GSYSASS 60
          MEGLIPFVYKAI+QYK +K    + SWL +SPS SY+RLP+GDSGRFQ+Q+   S+SA+S
Sbjct: 1  MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60

Query: 61 PSS-KPASSTAAQILVSTGVQSPLRHLTPRRVAA 93
          PSS  P SS+A QI+VS+GVQSP + LT R +AA
Sbjct: 61 PSSTNPNSSSATQIIVSSGVQSPHQCLTHRPIAA 94

[Close]

BLAST of Moc05g32480 vs. ExPASy TrEMBL
Match: A0A2K3M0C8 (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g040293 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.0e-19
Identity = 59/92 (64.13%), Postives = 74/92 (80.43%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKTEKQVPALRSWLGDSPSASYIRLPSGDSGRFQLQSDGSYSASSP 60
          MEGLIP VYK I+QYK EK+  A+ SW+ +SPS SY+RLP+GDSGRFQ+QS  S S+S  
Sbjct: 1  MEGLIPLVYKTIMQYKGEKE-GAIGSWICESPSYSYMRLPTGDSGRFQIQSTSSLSSS-- 60

Query: 61 SSKPASSTAAQILVSTGVQSPLRHLTPRRVAA 93
          SSKP SS+A++I+VS+GVQSP   LT RR+AA
Sbjct: 61 SSKPVSSSASKIIVSSGVQSPHHCLTHRRIAA 89

[Close]

BLAST of Moc05g32480 vs. TAIR 10
Match: AT5G02090.1 (unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 40.8 bits (94), Expect = 6.9e-04
Identity = 31/85 (36.47%), Postives = 42/85 (49.41%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKTEKQVPALRSWLGDSPSAS--YIRLPSGDSGRFQLQSDGSYSA- 60
          MEGLIPF+YKAIV YK E    ++      SPS +  Y+RLP   S RF+      +   
Sbjct: 1  MEGLIPFLYKAIVMYKREGSFSSVLLSDHHSPSNAGYYMRLPGDSSSRFRTSDLRRFGTD 60

Query: 61 ------SSPSSKPASSTAAQILVST 77
                ++PSS P+  +   I   T
Sbjct: 61 RFGMLETTPSSSPSRVSTRNITKRT 85

The following BLAST results are available for this feature:

BLAST of Moc05g32480 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7017269.1	8.6e-33	85.87	hypothetical protein SDJN02_19132, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6580521.1	2.5e-32	84.78	hypothetical protein SDJN03_20523, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0044116.1	8.9e-30	82.61	legume-specific protein [Cucumis melo var. makuwa] >TYK25022.1 legume-specific p...	[more]
KAG6596392.1	4.4e-29	79.35	hypothetical protein SDJN03_09572, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAE8650999.1	2.9e-28	82.42	hypothetical protein Csa_002313 [Cucumis sativus]	[more]

BLAST of Moc05g32480 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g32480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DNC7	4.3e-30	82.61	Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LD26	9.6e-30	82.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1	[more]
K7MT87	2.4e-20	64.89	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G187300 PE=4 SV=1	[more]
A0A0B2P904	1.5e-19	63.83	Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_048924 PE=4 SV=1	[more]
A0A2K3M0C8	2.0e-19	64.13	Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g040293 PE=4 SV=1	[more]

BLAST of Moc05g32480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02090.1	6.9e-04	36.47	unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..70
None	No IPR available	PANTHER	PTHR34670:SF10	LEGUME-SPECIFIC PROTEIN	coord: 1..92
None	No IPR available	PANTHER	PTHR34670	EXPRESSED PROTEIN	coord: 1..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g32480.1	Moc05g32480.1	mRNA