Moc05g30620 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g30620
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	histone deacetylase HDT1
Location	chr5: 22910162 .. 22914584 (+)
RNA-Seq Expression	Moc05g30620
Synteny	Moc05g30620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTTTGGGGTGATTTTCTCTCTTCCCTTTCCTCCTCTGCTTGTTTTGTTTACTTACTGCTTCTTCTTTATCGGCTTCTGTCACATCTTCCGTATCTTTTTGTTACTCCCTGTTTTCCACTCTCCGTTGGGTGAAGAAGATATGAGACTGGCAGAGAAAGGGATGTTTGATAAGTGGTTTACGTGTTCCTACTGTAGAAATGGTTTAGGGAATTGACTTTTGCTATCTGTTTATGCACTGGGATTTTGCTGTGTGTTGTTGCAAAGGAAATCATAGGAACAAGTTCAATTTGAACTGATATTTATGTTTTAAAGAATCCGTCCCAGTTTCGTTTTTATGTATATGTGATGTGAATTTGAACCTTACAATTCCGAAAGTAGAAGGTTATACTATAAATGAGTGAAGTCGTCATGTCCCGACTGCTCGAATGTTTGTAGACTCTCTTCTCTTTGTAGTGAGGTGATTATGGACGCTGTTGTTTGAACTTTAAAGTGCATTGTTAATTTACCTGTGTTCTGTTTGACAAGATAGGAACACTAAATCCGCAGCCTTATGTTTTTTCTTGTGCTGGTTATTTACTCCTGTTGTTCATGGACGGTTATTTTAGTAATGCCACTAGTTTCAACTATCTAAGGAATTCCTACTAAATCATAATGCGTAAAAGTTCTTTTAGTTTTAACGAATCATTTACGAAAAACTATATTGTTGGAGATGAGAGCTTGAAACAACAATTTCTGCTGGAAATGAAGAGGGGTTTGACTGCCATGTGTCCAGTATTTCTTGGTGAATATGCTGGTGTAATGGTGTTACTACATGTTCTCTTGCATGTCAATGTACCTAATCGAAGCACATTGTTATATGCATATAGAGTAATGTGCTGGCACTACGTTTCCTTATGACCTAGTGGTATCGACATGTTATGCAGGTGCTGAGGTTAAAGTTGGGGAACCTCTCTTGGTGAGTCCTGGGGAGGAGAAGATATTGCATCTGTCTCAGGTATCATCTGTGGGTTAGTTTGTTGGTCTGTTCATAAGAAACATGTAGGCAGTCATTGAGTTACATGTTTTCCACAGGCCTGCCTTGGAGAGTCCAGGGGCAAAGGAAGTGAACCCGTTTTCCTATATGTCAAGGTTGGCAATCAAAAGCTTGTTCTGGGGACACTCTCCTCAGAGAAATTCCCACAAGTGTCCTTCGATCTAGTGTTCGACAAAGAATTTGAGCTATCCCATAATTGGAAAAATGGAAGTGTCTACTTTACGGGATATACATCTCTTCTTCCAGAAGAATATCCTTTCTCCGAATTCTTTGTTGTCTAAGTTTTTATGTTATTTTTCTCTTAAATTCATCTTCATATTATTTAGTTTAATTGCTATATTTGCATTTTCTCGTGTTGTTTCCTTGACTAGTTTGAGTTTTTTTCATCGCCACGGAAGAATCTTCTTGTAAGTTATTGATCAAAACATTGTGAGATTGGTATTATCTTTTAATTTCATTAAAACCAATGAATTAGTTGACCGGTTTGATGCTATTTTTCAAATTCAGATACTGATTCTGAAGAGGATATTCCAGTAGCTGCCGTTGACAATGGTAATGTTTACTCTCTTGTGCATTTGCCATTTTAATTTAGCAACATTAACATAGGCTACAACTGTTTGGTGCAGGAAAGCCTGAGGCACAGCCTAAGAAGGATGCAAAGCCTGATGCTTCTGGAAGTAAGCGAAAGGTGCAGATTGTAGAACCAAACAAAAGTGGCTCTAATTCAATTATTGACAGTAAGAAAAATGATGATACTTCTGACGAAGATGATGATGAGGATGAAGATAGCTTGGACGATGAGGTACTCTTATATGTCATTATGCAGGCTACATACATCTACATGATCTTTTCTTTGCTGAAATATCCTTTTTCGCTGCATTAATTGGGTAAGTGCATTGATGTTTTCAAATTCAAAAAAAGAAAAAAAAAAGAAAAGAAAGAAAGAGAAGAAGAAGATGACACACAGCTCTTGTAAAATATGGAGCAAGAACTTAATTATATTAGCTTTTCTCATTTTCATTCCATGTGAAGCTAGATGCCTGTTCCGTGGTGATACACTTACGATTTCTGATTGAAAGAATTTTGGCTATTCTAATTCGTTTTCTTCTTTGGTTAATGTTAATCCACACCACTTCAATTTAGCCAGTGTTTGTCTGCCTAATCAAGTGTGGTAATTCAACATTTTTCAATCTTTGTTCTGAACAATGATCATAACTCCAGGAGCATAATTTCTTTCCGAGCTACTACTTGATATTTGCTCTGATGTAGGCCATATAAGGAAGTTAGTATCTTAGAATCTACTTTACTAATATGGCCATTGAGTTTTAACTTTTATTACCATCTGTCTTGGTTTTCTTTAGAATGCGAATGGAGGCGAAGAAGATGACACTGACGATGATGAAAATGAGTTTTCTGGGGATGACAGCGACAAAACTGATAATGAGGAATCGGATGACAGCTTGGCAGAGGATGAGCAAACACCGAAAAAGGTACTGGGCTGCCATCTTTCTCTCATCGTTAGAGAAACTTGATTGCATTGAGCTGGAAGTTCTTTTCTTTTATTTGCCATTTTTTAATGAAATAATTGTTGACACCATTGAAGGCTGAGGCAAGCAAGAAGAGACCTCTAGAGTCTGCTAATAAGACACCTGCAGCTGATAAGAAGGCGAAACTCGTTACTCCTCAAAAAACTGGTTGGTTTCTTCTGTCTTTTATGAGAACCTGATTTACTTTCAGATTTTTAGCCTTTATATTAGCCATCATGGTGTGGCCTAGTGGTCAATAAGGGCCAATGTAAATAGTAAAGGGCTTAAAGAGAATGGGTTCAAACCATGATAGTCACCTACCTAGGATTTAGTATCCTACGAGTTACCTTGACATCAAAACGTAGTAAAGTTAGGTTGTTGTCTCGTGAGATTAGTTGAGGTGCGTGAAAGTTGGCTTGGACACTCATGAATATCAAAAAAAAAATTAGCCCTTTATATTGCTGGGTGAAGTCACCAGGATTCTGACAGGTTTCTTCTTACTGATTAATTTGTTCAAGAAAACTACAACTATCAAATTACTGACCAATTCAAGAGGGTCATCTATCTCTCCATGCTACTTCTCAGTCTTTACACATAAAAACAACACTTTGAAATCACAACAAACAACATAAAAAAAAAAAAAGAAAAGGAAAGAAAGAAAGACAAACAGGGATAAACAAAACTAAGGAAGTTAGGGAACTAACTAAAACCCCCCAATATTTCCTAATTTTCCCTTTCTGAAATAAACCTTCAAGACTGGAGGATTAGAAGTTTTTGTTTAAATTAAGCAGTTTTAGTTAGTTTCATGGGTTTGAATGTTATTAAAGTAAGCTGTAAGCTGTAAGTTGGAACTTAGTCAGTTATGTTTATCTACTTTTTTATTTTTTTTTTATGTTGTGTTTTGAACATTTTTGGACTTGTCAAAAAGTCCAATGTTTACTAAAGTATAAATCATTTCATTATGAATGATCATATATCTAATAGAAAATCATGTTATATCGTAGCATGACCAACACTAAAAACTACTTTCAACATAGTATAATGACCACTTCAGAAGGTTTTTTTTTTTAATGTATGAAAGTGAAAAATAGTGTGGAGAGATAGATGCCCTCTCGAATGGGTCATTAGCTTATTGCAACCTAAGTAAAGAGATACCTATCTAATTGCAGTTCCATTAGTGTTTACTACCATCCACCCATAGAGGCAGACTTTGGGGTGAAATTCAAATCCTTGAACTGTTGAACAAATTACTAAGATGGCTTTTTTATTTTTGGTCACAGATGGCAAGAAAGTTGTAGGTCATGTAGCTACTCCTCATCCTTCAAAGCAGGCTGGGAAAACACCTGCTGCTAATGACCAAAATAAGCAGCAGACTCCCAAATCAGCTGGTGGCGCATTCCCTTGCAAATCCTGCAAGAGGTATGTATCTCTGTAATTGCCTTGGGAAATCAAATTGATCACAATTTCTTTACTATTTATGTGCGCCATGTTTTCACTTTCTTCAAAACATTTGAATTCTTAACTAATTTTTAAAAAGTAGATAGAAAAACAGAGAAAAAACCAAAATGGGTATGAAAAGGATCCTTAGTTTTTTATTTTCTATTTTAGAAAAATTATGCCTCCATTTGAATTCTTAATCAAATTTCAAATGCAAAATCACATTTTAAAATTTGGTTTAGATTTTGAGTGTGTTTTTAAAAAGTAGATAACAAAACAAAGAAACAAGTCAAAATAGTTATGATTCGGGATCTAAATTTTCTTTAATTTAATTGTGGGAACACACTTTCATTGAAGGGCATTCGGGTCAGAAGGTGCTTTACAATCCCACACAAAGGCTAAGCACAGTGCTGAGAAGTGA

mRNA sequence

ATGGAGTTTTGGGGTGCTGAGGTTAAAGTTGGGGAACCTCTCTTGGTGAGTCCTGGGGAGGAGAAGATATTGCATCTGTCTCAGGCCTGCCTTGGAGAGTCCAGGGGCAAAGGAAGTGAACCCGTTTTCCTATATGTCAAGGTTGGCAATCAAAAGCTTGTTCTGGGGACACTCTCCTCAGAGAAATTCCCACAAGTGTCCTTCGATCTAGTGTTCGACAAAGAATTTGAGCTATCCCATAATTGGAAAAATGGAAATACTGATTCTGAAGAGGATATTCCAGTAGCTGCCGTTGACAATGGAAAGCCTGAGGCACAGCCTAAGAAGGATGCAAAGCCTGATGCTTCTGGAAGTAAGCGAAAGGTGCAGATTGTAGAACCAAACAAAAGTGGCTCTAATTCAATTATTGACAGTAAGAAAAATGATGATACTTCTGACGAAGATGATGATGAGGATGAAGATAGCTTGGACGATGAGAATGCGAATGGAGGCGAAGAAGATGACACTGACGATGATGAAAATGAGTTTTCTGGGGATGACAGCGACAAAACTGATAATGAGGAATCGGATGACAGCTTGGCAGAGGATGAGCAAACACCGAAAAAGGCTGAGGCAAGCAAGAAGAGACCTCTAGAGTCTGCTAATAAGACACCTGCAGCTGATAAGAAGGCGAAACTCGTTACTCCTCAAAAAACTGATGGCAAGAAAGTTGTAGGTCATGTAGCTACTCCTCATCCTTCAAAGCAGGCTGGGAAAACACCTGCTGCTAATGACCAAAATAAGCAGCAGACTCCCAAATCAGCTGGTGGCGCATTCCCTTGCAAATCCTGCAAGAGGGCATTCGGGTCAGAAGGTGCTTTACAATCCCACACAAAGGCTAAGCACAGTGCTGAGAAGTGA

Coding sequence (CDS)

ATGGAGTTTTGGGGTGCTGAGGTTAAAGTTGGGGAACCTCTCTTGGTGAGTCCTGGGGAGGAGAAGATATTGCATCTGTCTCAGGCCTGCCTTGGAGAGTCCAGGGGCAAAGGAAGTGAACCCGTTTTCCTATATGTCAAGGTTGGCAATCAAAAGCTTGTTCTGGGGACACTCTCCTCAGAGAAATTCCCACAAGTGTCCTTCGATCTAGTGTTCGACAAAGAATTTGAGCTATCCCATAATTGGAAAAATGGAAATACTGATTCTGAAGAGGATATTCCAGTAGCTGCCGTTGACAATGGAAAGCCTGAGGCACAGCCTAAGAAGGATGCAAAGCCTGATGCTTCTGGAAGTAAGCGAAAGGTGCAGATTGTAGAACCAAACAAAAGTGGCTCTAATTCAATTATTGACAGTAAGAAAAATGATGATACTTCTGACGAAGATGATGATGAGGATGAAGATAGCTTGGACGATGAGAATGCGAATGGAGGCGAAGAAGATGACACTGACGATGATGAAAATGAGTTTTCTGGGGATGACAGCGACAAAACTGATAATGAGGAATCGGATGACAGCTTGGCAGAGGATGAGCAAACACCGAAAAAGGCTGAGGCAAGCAAGAAGAGACCTCTAGAGTCTGCTAATAAGACACCTGCAGCTGATAAGAAGGCGAAACTCGTTACTCCTCAAAAAACTGATGGCAAGAAAGTTGTAGGTCATGTAGCTACTCCTCATCCTTCAAAGCAGGCTGGGAAAACACCTGCTGCTAATGACCAAAATAAGCAGCAGACTCCCAAATCAGCTGGTGGCGCATTCCCTTGCAAATCCTGCAAGAGGGCATTCGGGTCAGAAGGTGCTTTACAATCCCACACAAAGGCTAAGCACAGTGCTGAGAAGTGA

Protein sequence

MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSSEKFPQVSFDLVFDKEFELSHNWKNGNTDSEEDIPVAAVDNGKPEAQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDENANGGEEDDTDDDENEFSGDDSDKTDNEESDDSLAEDEQTPKKAEASKKRPLESANKTPAADKKAKLVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKSCKRAFGSEGALQSHTKAKHSAEK

Homology

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BLAST of Moc05g30620 vs. NCBI nr
Match: XP_022144751.1 (histone deacetylase HDT1 [Momordica charantia])

HSP 1 Score: 536.6 bits (1381), Expect = 1.4e-148
Identity = 298/317 (94.01%), Postives = 299/317 (94.32%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60
           MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGN------------------TDSEEDIPVAAVDNGK 120
           EKFPQVSFDLVFDKEFELSHNWKNG+                  TDSEEDIPVAAVDNGK
Sbjct: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVYFTGYTSLLPEEEESSYTDSEEDIPVAAVDNGK 120

Query: 121 PEAQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDENAN 180
           PEAQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDENAN
Sbjct: 121 PEAQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDENAN 180

Query: 181 GGEEDDTDDDENEFSGDDSDKTDNEESDDSLAEDEQTPKKAEASKKRPLESANKTPAADK 240
           GGEEDDTDDDENEFSGDDSDKTDNEESDDSLAEDEQTPKKAEASKKRPLESANKTPAADK
Sbjct: 181 GGEEDDTDDDENEFSGDDSDKTDNEESDDSLAEDEQTPKKAEASKKRPLESANKTPAADK 240

Query: 241 KAKLVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKSCKRAFG 300
           KAKLVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKSCKRAFG
Sbjct: 241 KAKLVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKSCKRAFG 300

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BLAST of Moc05g30620 vs. NCBI nr
Match: XP_038905525.1 (histone deacetylase HDT1 [Benincasa hispida])

HSP 1 Score: 449.5 bits (1155), Expect = 2.2e-122
Identity = 255/317 (80.44%), Postives = 272/317 (85.80%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60
           MEFWGAEVK GEPLLVSPGEEK+LHLSQACLGES+ KGSE VFLYVKVGNQKLVLG LSS
Sbjct: 1   MEFWGAEVKAGEPLLVSPGEEKLLHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGILSS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGN------------------TDSEEDIPVAAVDNGK 120
           EKFPQVSFDLVFDKEFELSHNWKNG+                  TDSEE  P+AA+DNGK
Sbjct: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSFLPEEEESSYTDSEEGFPLAAIDNGK 120

Query: 121 PEAQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDENAN 180
            E + KKDAKPD SG+K+KVQIVEPNK GSNSIIDSKKN D+SDEDDDEDE+S DDENAN
Sbjct: 121 QELETKKDAKPDTSGTKKKVQIVEPNKGGSNSIIDSKKNKDSSDEDDDEDEESTDDENAN 180

Query: 181 GGEEDDTDDDENEFSGDDSDKTDNEESDDSLAEDEQTPKKAEASKKRPLESANKTPAADK 240
            GEEDDTDDDENEFSG DS+ +D EESDDSL EDEQTPKKAEASKKRPL+SANKT A DK
Sbjct: 181 EGEEDDTDDDENEFSGVDSEDSD-EESDDSLEEDEQTPKKAEASKKRPLDSANKTAAPDK 240

Query: 241 KAKLVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKSCKRAFG 300
           KAKLVTPQKTDGKK V HVATPHPSK+AGK PAAND+NKQQTPKSAGGAFPCK+C R FG
Sbjct: 241 KAKLVTPQKTDGKKGVAHVATPHPSKKAGKMPAANDKNKQQTPKSAGGAFPCKTCNRTFG 300

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BLAST of Moc05g30620 vs. NCBI nr
Match: XP_008442794.1 (PREDICTED: histone deacetylase HDT1 [Cucumis melo])

HSP 1 Score: 447.2 bits (1149), Expect = 1.1e-121
Identity = 253/317 (79.81%), Postives = 271/317 (85.49%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60
           MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGES+ KGSE VFLYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGN------------------TDSEEDIPVAAVDNGK 120
           EKFPQVSFDLVFDKEFELSHNWKNG+                  TDSEED P+A  DNGK
Sbjct: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120

Query: 121 PEAQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDENAN 180
           PE +PKKDAKPD SG+K+KVQIVEPNK  SNS IDSKKN+D+SDEDDDEDE+S DDEN N
Sbjct: 121 PEPEPKKDAKPDTSGTKKKVQIVEPNKVASNSNIDSKKNEDSSDEDDDEDEESTDDENEN 180

Query: 181 GGEEDDTDDDENEFSGDDSDKTDNEESDDSLAEDEQTPKKAEASKKRPLESANKTPAADK 240
           GGEEDDTDDDENE SG DS+ +D E+SDDSL EDEQTPKKAEASKKRPL+SANKTPA DK
Sbjct: 181 GGEEDDTDDDENESSGVDSEDSD-EDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPDK 240

Query: 241 KAKLVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKSCKRAFG 300
           KAKLVTPQKTDGKK V HV TPHPSK+AGK PAAND+ KQQTPKSA  AFPCK+C R FG
Sbjct: 241 KAKLVTPQKTDGKKGVAHVDTPHPSKKAGKMPAANDKTKQQTPKSANAAFPCKTCNRTFG 300

[Close]

BLAST of Moc05g30620 vs. NCBI nr
Match: XP_023540314.1 (histone deacetylase HDT1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 439.9 bits (1130), Expect = 1.8e-119
Identity = 256/321 (79.75%), Postives = 270/321 (84.11%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60
           MEFWGAEVK GEPLLVSPGEE ILHLSQACLGES+ KGSE VFLYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGN-----------------TDSEEDIPVAAVDNGKP 120
           EKFPQVSFDLVFDK+FELSHNWKNG+                 TDSEED+P A +DNGKP
Sbjct: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEEESYTDSEEDLPQAVIDNGKP 120

Query: 121 E----AQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDE 180
           E     QPKKD KP  SG+K+KVQIVEPNK GS   ID+KKN D+SDEDDDEDEDS DDE
Sbjct: 121 EPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGS---IDTKKNADSSDEDDDEDEDSSDDE 180

Query: 181 NANGGEEDDTDDDENEFSGDDSDKTD-NEESDDSLAEDEQTPKKAEASKKRPLESANKTP 240
           NANGGEEDD+ DDENEFSGDDSD  D NE+ DDS+ EDEQTPKKAEASKKRPLE+ANK P
Sbjct: 181 NANGGEEDDS-DDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKAP 240

Query: 241 AADKKAKLVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKSCK 300
           A DKK KLVTPQKTDGKK V HVATPHPSKQAGK PAA+DQNKQQTPKSA GAFPCKSCK
Sbjct: 241 APDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCKSCK 300

[Close]

BLAST of Moc05g30620 vs. NCBI nr
Match: XP_022946410.1 (histone deacetylase HDT1 [Cucurbita moschata])

HSP 1 Score: 438.7 bits (1127), Expect = 4.0e-119
Identity = 255/321 (79.44%), Postives = 271/321 (84.42%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60
           MEFWGAEVK GEPLLVSPGEE ILHLSQACLGES+ KGSE VFLYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGN-----------------TDSEEDIPVAAVDNGKP 120
           EKFPQVSFDLVFDK+FELSHNWKNG+                 TDSEED+P A +DNGKP
Sbjct: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEEESYTDSEEDLPQAVIDNGKP 120

Query: 121 E----AQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDE 180
           E     QPKKD KP  SG+K+KVQIVEPNK GS   ID+KKN D+SDEDDD++EDS DDE
Sbjct: 121 EPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGS---IDTKKNADSSDEDDDDNEDSSDDE 180

Query: 181 NANGGEEDDTDDDENEFSGDDSDKTD-NEESDDSLAEDEQTPKKAEASKKRPLESANKTP 240
           NANGGEEDD+ DDENEFSGDDSD  D NE+ DDS+ EDEQTPKKAEASKKRPLE+ANKTP
Sbjct: 181 NANGGEEDDS-DDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKTP 240

Query: 241 AADKKAKLVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKSCK 300
           A DKK KLVTPQKTDGKK V HVATPHPSKQAGK PAA+DQNKQQTPKSA GAFPCKSCK
Sbjct: 241 APDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCKSCK 300

[Close]

BLAST of Moc05g30620 vs. ExPASy Swiss-Prot
Match: Q6V9I6 (Histone deacetylase HDT1 OS=Solanum chacoense OX=4108 GN=HDT1 PE=2 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.3e-59
Identity = 159/323 (49.23%), Postives = 191/323 (59.13%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60
           MEFWGAEVK GEPL V PG+  +LHLSQA LGE +   SE V L V +  +KLVLGTL+S
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKSESVCLSVNIDGKKLVLGTLNS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGNT----------------------DSEEDIPVAAV 120
           EK PQ  FDLVFD++FELSHN K+G+                       +S+EDIP+   
Sbjct: 61  EKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEEEDDEDDYDESDEDIPLTLA 120

Query: 121 DNGKPEAQP--KKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSL 180
           ++GKPE +   K +A  D++  K+KV+IVEP K                   DDEDE S 
Sbjct: 121 NSGKPEPKEAGKSNAGKDSASGKQKVRIVEPTK-------------------DDEDESSD 180

Query: 181 DDENANGGEEDDTDDDENEFSGDDSDKTDNEESDDSLAEDEQTPKKAEASKKRPLESANK 240
           DD++  G +EDD+DD E                       E+TPKKAE +K+R  +SA K
Sbjct: 181 DDDSDMGEDEDDSDDSE-----------------------EETPKKAEPAKRRKADSATK 240

Query: 241 TPAADKKAKLVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKS 300
           TP  DKKAKL TPQKTDGKK  GHVATPHPSKQA K           TPKSA G+  CK 
Sbjct: 241 TPVTDKKAKLTTPQKTDGKKGGGHVATPHPSKQASK-----------TPKSA-GSHHCKP 269

[Close]

BLAST of Moc05g30620 vs. ExPASy Swiss-Prot
Match: Q9LZR5 (Histone deacetylase HDT3 OS=Arabidopsis thaliana OX=3702 GN=HDT3 PE=1 SV=2)

HSP 1 Score: 206.5 bits (524), Expect = 4.3e-52
Identity = 145/312 (46.47%), Postives = 192/312 (61.54%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60
           MEFWG EVK G+PL + PG ++++H+SQ  LGES+   +EP+ LYV VG+ KL++GTLS 
Sbjct: 1   MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGESKNNVTEPIQLYVTVGSDKLLIGTLSH 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGNTDSEEDIPVAAVDNGKPEAQPKKDAKPDASGSKR 120
           EKFPQ+S ++V ++ F LSH WKNG+           VD   PE +   D + +A+G K 
Sbjct: 61  EKFPQLSTEIVLERNFALSHTWKNGSV----FFSGYKVDASDPEPEDLIDDQLEAAGFK- 120

Query: 121 KVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDENANGGEEDDTDDDENEFSGD- 180
                   KS +  +     N+D   + DD+         A+G EED +DDD++E SGD 
Sbjct: 121 -----AAPKSAAKQVNFQLPNEDVKAKQDDD---------ADGSEEDSSDDDDSENSGDE 180

Query: 181 ---------DSDKTDNEESDDSLAEDEQTPKKAEASKKRPLE-SANKTPAADKKAKLVTP 240
                    DS++ D+ + ++  + +E+TPKK E  KKR  E +++K PA++KKAK VTP
Sbjct: 181 EEEKVTAESDSEEDDSSDDEEDDSSEEETPKKPEEPKKRSAEPNSSKNPASNKKAKFVTP 240

Query: 241 QKTDGKKVVGHVATPHPSKQAGKTPAAND----QNKQQTPKSAGGAFPCKSCKRAFGSEG 298
           QKTD KK   HVATPHPSKQAGK            +QQTPKSA GAF CKSC R F SE 
Sbjct: 241 QKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSA-GAFGCKSCTRTFTSEM 292

[Close]

BLAST of Moc05g30620 vs. ExPASy Swiss-Prot
Match: Q9M4U5 (Histone deacetylase HDT2 OS=Zea mays OX=4577 GN=HDT2 PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.1e-47
Identity = 143/322 (44.41%), Postives = 195/322 (60.56%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60
           MEFWG EVK G  +   PG   ILH+SQA LGES  K S+   +YVKV ++KL +GTLS 
Sbjct: 1   MEFWGLEVKPGSTVKCEPGHGFILHVSQAALGES--KKSDSALMYVKVDDKKLAIGTLSI 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKN---------------------GNTDSEEDIPVAAV- 120
           +K+PQ+ FDLVF+KEFELSH  K                       + D EE++ +  + 
Sbjct: 61  DKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQPIEGDEMDLDSEDEEEELNIPVIK 120

Query: 121 DNGKPEAQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDD 180
           +NGK + + ++         K + + V    S S+  ++ K  DD+ D D+DE +DS +D
Sbjct: 121 ENGKADGKEEQ---------KNQEKAVAATASKSSLGLEKKSKDDSDDSDEDESDDSDED 180

Query: 181 ENANGGEEDDTDDDENEFSGDDSDKTDNEESDDSLAEDEQTPKKAEASKKRPLESANKTP 240
           ++ +  E +    DE    GDD D +D +++ D   E+  TPKK EA KKR  E+A KTP
Sbjct: 181 DSDDSDEGEGLSPDE----GDD-DSSDEDDTSDDDEEETPTPKKPEAGKKRGAENALKTP 240

Query: 241 AADKKAKLVTP--QKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKS 299
            +DKKAK+ TP  QKT GKK   HVATPHP+K  GKTPA ND+  +++PKS GG+ PCKS
Sbjct: 241 LSDKKAKVATPPAQKTGGKKGATHVATPHPAK--GKTPANNDKLTEKSPKS-GGSVPCKS 300

[Close]

BLAST of Moc05g30620 vs. ExPASy Swiss-Prot
Match: Q8LJS2 (Histone deacetylase HDT1 OS=Glycine max OX=3847 GN=HDT1 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.6e-43
Identity = 142/323 (43.96%), Postives = 185/323 (57.28%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGE--EKILHLSQACLGES-RGKGSEPVFLYVKVGNQKLVLGT 60
           MEFWG EVKVG+ + V P +  +  +H+SQ  LGE+ + K +EPV LY+KVG QK+VLGT
Sbjct: 1   MEFWGVEVKVGQTVTVDPMDPVDSYIHISQVALGEAKKDKPNEPVVLYLKVGEQKIVLGT 60

Query: 61  LSSEKFPQVSFDLVFDKEFELSHNWKNG---------------------NTDSEEDIPVA 120
           LS +  P +S DLV D + ELSH  K+                      +++ +E++ + 
Sbjct: 61  LSRDGIPHLSLDLVLDSDSELSHTSKSASVFFCGYKVLTGNDNASDFSDSSEEDEELALE 120

Query: 121 AVDNGKPEAQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSL 180
             DNGKPE +        A G+K    + +P+KS       +K  D   DEDDD D++S 
Sbjct: 121 GQDNGKPELK--------AEGAK----VTKPSKSIPKIGAPAKAADPKKDEDDDSDDESD 180

Query: 181 DDENANGGEEDDTDDDENEFSGDDSDKTDNEESDDSLAEDEQTP-KKAEASKKRPLESAN 240
           DD     GE++    DE      D D    EESD    +DE+TP KK +  KKRP ESA 
Sbjct: 181 DD---LAGEDESGSSDEM-----DDDSNSEEESD---GDDEETPAKKVDQGKKRPNESAA 240

Query: 241 KTPAADKKAKLVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCK 299
           KTP + KKAK  TP+KTDGKK V HVATPHPSK+ GKTP   +  K QTP SA G   C 
Sbjct: 241 KTPISAKKAKTATPEKTDGKKSV-HVATPHPSKKGGKTP---NSTKGQTPNSA-GQLSCA 295

[Close]

BLAST of Moc05g30620 vs. ExPASy Swiss-Prot
Match: O24591 (Histone deacetylase HDT1 OS=Zea mays OX=4577 GN=HDT1 PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.0e-41
Identity = 143/328 (43.60%), Postives = 191/328 (58.23%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60
           MEFWG EVK G  +   PG   +LHLSQA LGES  K S+   +YVK+ +QKL +GTLS 
Sbjct: 1   MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGES--KKSDNALMYVKIDDQKLAIGTLSV 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKN---------------------GNTDSEEDIPVAAV- 120
           +K P + FDL+FDKEFELSH  K                       + D +E++ V  V 
Sbjct: 61  DKNPHIQFDLIFDKEFELSHTSKTTSVFFTGYKVEQPFEEDEMDLDSEDEDEELNVPVVK 120

Query: 121 DNGKPEAQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDD 180
           +NGK + + +K          ++  +  P+KS      DSKK+ D  D D+DE +DS +D
Sbjct: 121 ENGKADEKKQK---------SQEKAVAAPSKSSP----DSKKSKDDDDSDEDETDDSDED 180

Query: 181 ENANGGEEDDTDDDENEFSGDDSDKTDNEESDDSLAEDEQTPKKAEASKKRPLESA-NKT 240
           E       DD+D+  +   GDD D +D +++ D   ED  TPKK E  KKRP ES+  KT
Sbjct: 181 ET------DDSDEGLSSEEGDD-DSSDEDDTSDDEEEDTPTPKKPEVGKKRPAESSVLKT 240

Query: 241 PAADKKAKLVTP--QKTDGKK-VVGHVATPHPSKQAGKTPAANDQNKQQTPKSA---GGA 300
           P +DKKAK+ TP  QKT GKK    HVATPHP+K  GKT   ND++  ++PKSA   GG+
Sbjct: 241 PLSDKKAKVATPSSQKTGGKKGAAVHVATPHPAK--GKTIVNNDKS-VKSPKSAPKSGGS 300

[Close]

BLAST of Moc05g30620 vs. ExPASy TrEMBL
Match: A0A6J1CUC4 (histone deacetylase HDT1 OS=Momordica charantia OX=3673 GN=LOC111014365 PE=3 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 6.7e-149
Identity = 298/317 (94.01%), Postives = 299/317 (94.32%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60
           MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGN------------------TDSEEDIPVAAVDNGK 120
           EKFPQVSFDLVFDKEFELSHNWKNG+                  TDSEEDIPVAAVDNGK
Sbjct: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVYFTGYTSLLPEEEESSYTDSEEDIPVAAVDNGK 120

Query: 121 PEAQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDENAN 180
           PEAQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDENAN
Sbjct: 121 PEAQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDENAN 180

Query: 181 GGEEDDTDDDENEFSGDDSDKTDNEESDDSLAEDEQTPKKAEASKKRPLESANKTPAADK 240
           GGEEDDTDDDENEFSGDDSDKTDNEESDDSLAEDEQTPKKAEASKKRPLESANKTPAADK
Sbjct: 181 GGEEDDTDDDENEFSGDDSDKTDNEESDDSLAEDEQTPKKAEASKKRPLESANKTPAADK 240

Query: 241 KAKLVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKSCKRAFG 300
           KAKLVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKSCKRAFG
Sbjct: 241 KAKLVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKSCKRAFG 300

[Close]

BLAST of Moc05g30620 vs. ExPASy TrEMBL
Match: A0A1S3B626 (histone deacetylase HDT1 OS=Cucumis melo OX=3656 GN=LOC103486568 PE=3 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 5.4e-122
Identity = 253/317 (79.81%), Postives = 271/317 (85.49%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60
           MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGES+ KGSE VFLYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGN------------------TDSEEDIPVAAVDNGK 120
           EKFPQVSFDLVFDKEFELSHNWKNG+                  TDSEED P+A  DNGK
Sbjct: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120

Query: 121 PEAQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDENAN 180
           PE +PKKDAKPD SG+K+KVQIVEPNK  SNS IDSKKN+D+SDEDDDEDE+S DDEN N
Sbjct: 121 PEPEPKKDAKPDTSGTKKKVQIVEPNKVASNSNIDSKKNEDSSDEDDDEDEESTDDENEN 180

Query: 181 GGEEDDTDDDENEFSGDDSDKTDNEESDDSLAEDEQTPKKAEASKKRPLESANKTPAADK 240
           GGEEDDTDDDENE SG DS+ +D E+SDDSL EDEQTPKKAEASKKRPL+SANKTPA DK
Sbjct: 181 GGEEDDTDDDENESSGVDSEDSD-EDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPDK 240

Query: 241 KAKLVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKSCKRAFG 300
           KAKLVTPQKTDGKK V HV TPHPSK+AGK PAAND+ KQQTPKSA  AFPCK+C R FG
Sbjct: 241 KAKLVTPQKTDGKKGVAHVDTPHPSKKAGKMPAANDKTKQQTPKSANAAFPCKTCNRTFG 300

[Close]

BLAST of Moc05g30620 vs. ExPASy TrEMBL
Match: A0A6J1G3S8 (histone deacetylase HDT1 OS=Cucurbita moschata OX=3662 GN=LOC111450473 PE=3 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.9e-119
Identity = 255/321 (79.44%), Postives = 271/321 (84.42%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60
           MEFWGAEVK GEPLLVSPGEE ILHLSQACLGES+ KGSE VFLYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGN-----------------TDSEEDIPVAAVDNGKP 120
           EKFPQVSFDLVFDK+FELSHNWKNG+                 TDSEED+P A +DNGKP
Sbjct: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEEESYTDSEEDLPQAVIDNGKP 120

Query: 121 E----AQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDE 180
           E     QPKKD KP  SG+K+KVQIVEPNK GS   ID+KKN D+SDEDDD++EDS DDE
Sbjct: 121 EPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGS---IDTKKNADSSDEDDDDNEDSSDDE 180

Query: 181 NANGGEEDDTDDDENEFSGDDSDKTD-NEESDDSLAEDEQTPKKAEASKKRPLESANKTP 240
           NANGGEEDD+ DDENEFSGDDSD  D NE+ DDS+ EDEQTPKKAEASKKRPLE+ANKTP
Sbjct: 181 NANGGEEDDS-DDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKTP 240

Query: 241 AADKKAKLVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKSCK 300
           A DKK KLVTPQKTDGKK V HVATPHPSKQAGK PAA+DQNKQQTPKSA GAFPCKSCK
Sbjct: 241 APDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCKSCK 300

[Close]

BLAST of Moc05g30620 vs. ExPASy TrEMBL
Match: A0A6J1KU46 (histone deacetylase HDT1-like OS=Cucurbita maxima OX=3661 GN=LOC111498681 PE=3 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 7.3e-119
Identity = 254/321 (79.13%), Postives = 268/321 (83.49%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60
           MEFWGAEVK GEPLLVSPGEE ILHLSQACLGES+ KGSE VFLYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGN-----------------TDSEEDIPVAAVDNGKP 120
           EKFPQVSFDLVFDK+FELSHNWKNG+                 TDSEED+P A +DNGKP
Sbjct: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEEESYTDSEEDLPQAVIDNGKP 120

Query: 121 E----AQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDE 180
           E     QPKKD KP  SG+K+KVQIVEPNK GS   ID+KKN+D SDEDDDEDEDS DDE
Sbjct: 121 EPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGS---IDTKKNEDISDEDDDEDEDSSDDE 180

Query: 181 NANGGEEDDTDDDENEFSGDDSDKTD-NEESDDSLAEDEQTPKKAEASKKRPLESANKTP 240
           NANGGEEDD+ DDENEFSGDDSD  D NE+ DDS+ EDEQTPKKAEASKKRPLE+ANKTP
Sbjct: 181 NANGGEEDDS-DDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKTP 240

Query: 241 AADKKAKLVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKSCK 300
           A DKK KLVTPQKTDGKK V HVATPHPSKQAGK P A+DQNKQQ PKSA GAFPCKSCK
Sbjct: 241 APDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQQIPKSASGAFPCKSCK 300

[Close]

BLAST of Moc05g30620 vs. ExPASy TrEMBL
Match: A0A0A0LEE5 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G748810 PE=3 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 3.6e-118
Identity = 250/319 (78.37%), Postives = 270/319 (84.64%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60
           MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGES+ KGSEPV LYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGN------------------TDSEEDIPVAAVDNGK 120
           EKFPQVSFDLVFDKEFELSHNWKNG+                  TDSEED P+A  DNGK
Sbjct: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120

Query: 121 --PEAQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDEN 180
             PE +PKKDAKPD SG+K+KVQIVEP+K  SNS IDSKKN D+SDEDDDEDE+S D+EN
Sbjct: 121 PEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNEN 180

Query: 181 ANGGEEDDTDDDENEFSGDDSDKTDNEESDDSLAEDEQTPKKAEASKKRPLESANKTPAA 240
            NGGEEDD+DDDENE SG DS+ +D E+SDDSL EDEQTPKKAEASKKRPL+SANKTPA 
Sbjct: 181 ENGGEEDDSDDDENESSGVDSEDSD-EDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAP 240

Query: 241 DKKAKLVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKSCKRA 300
           DKKAKLVTPQKTDGKK V HVATPHPSK+AGK  AAND+NKQQTPKSA  AF CK+C R 
Sbjct: 241 DKKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTCNRT 300

[Close]

BLAST of Moc05g30620 vs. TAIR 10
Match: AT5G03740.1 (histone deacetylase 2C )

HSP 1 Score: 206.5 bits (524), Expect = 3.1e-53
Identity = 145/312 (46.47%), Postives = 192/312 (61.54%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60
           MEFWG EVK G+PL + PG ++++H+SQ  LGES+   +EP+ LYV VG+ KL++GTLS 
Sbjct: 1   MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGESKNNVTEPIQLYVTVGSDKLLIGTLSH 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGNTDSEEDIPVAAVDNGKPEAQPKKDAKPDASGSKR 120
           EKFPQ+S ++V ++ F LSH WKNG+           VD   PE +   D + +A+G K 
Sbjct: 61  EKFPQLSTEIVLERNFALSHTWKNGSV----FFSGYKVDASDPEPEDLIDDQLEAAGFK- 120

Query: 121 KVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDENANGGEEDDTDDDENEFSGD- 180
                   KS +  +     N+D   + DD+         A+G EED +DDD++E SGD 
Sbjct: 121 -----AAPKSAAKQVNFQLPNEDVKAKQDDD---------ADGSEEDSSDDDDSENSGDE 180

Query: 181 ---------DSDKTDNEESDDSLAEDEQTPKKAEASKKRPLE-SANKTPAADKKAKLVTP 240
                    DS++ D+ + ++  + +E+TPKK E  KKR  E +++K PA++KKAK VTP
Sbjct: 181 EEEKVTAESDSEEDDSSDDEEDDSSEEETPKKPEEPKKRSAEPNSSKNPASNKKAKFVTP 240

Query: 241 QKTDGKKVVGHVATPHPSKQAGKTPAAND----QNKQQTPKSAGGAFPCKSCKRAFGSEG 298
           QKTD KK   HVATPHPSKQAGK            +QQTPKSA GAF CKSC R F SE 
Sbjct: 241 QKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSA-GAFGCKSCTRTFTSEM 292

[Close]

BLAST of Moc05g30620 vs. TAIR 10
Match: AT3G44750.1 (histone deacetylase 3 )

HSP 1 Score: 146.7 bits (369), Expect = 2.9e-35
Identity = 124/307 (40.39%), Postives = 156/307 (50.81%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60
           MEFWG EVK G+P+ V+P E  ++H+SQA LGE + K  E V L+VKVGNQ LVLGTLS+
Sbjct: 1   MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGN-------TDSEEDIPVAAVDNGKPEAQPKKDAKP 120
           E  PQ+  DLVFDKEFELSH W  G+       T + E    +  +  + E  P  +A  
Sbjct: 61  ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNIEPQGYSEEEEEEEEEVPAGNAAK 120

Query: 121 DASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDENANGGEEDDTDDDE 180
             +  K K   V+P                  DE+D+ D D +D+               
Sbjct: 121 AVAKPKAKPAEVKP---------------AVDDEEDESDSDGMDE--------------- 180

Query: 181 NEFSGDDSDKTDNEESDDSLAEDEQTPKKAEASKKRPLESANKTPAADKKAKL-VTPQKT 240
                DDSD  D+E       E+E TPKK  +SKKR  E+  K P + KKAK+ VTPQKT
Sbjct: 181 -----DDSDGEDSE-------EEEPTPKKPASSKKRANETTPKAPVSAKKAKVAVTPQKT 240

Query: 241 DGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKSCKRAFGSEGALQSHTK 300
           D KK  G  A                    Q+PKSA     C SCK+ F S  AL+SH K
Sbjct: 241 DEKKKGGKAA-------------------NQSPKSA-SQVSCGSCKKTFNSGNALESHNK 245

[Close]

BLAST of Moc05g30620 vs. TAIR 10
Match: AT5G22650.1 (histone deacetylase 2B )

HSP 1 Score: 146.4 bits (368), Expect = 3.8e-35
Identity = 127/304 (41.78%), Postives = 162/304 (53.29%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60
           MEFWG  V       V+P E+ ++H+SQA L +   K  E V L V VG  KLV+GTLS 
Sbjct: 1   MEFWGVAVTPKNATKVTPEEDSLVHISQASL-DCTVKSGESVVLSVTVGGAKLVIGTLSQ 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGNT--------DSEEDIPVAAVDNGKPEAQPKK--- 120
           +KFPQ+SFDLVFDKEFELSH+    N         + E+D   ++ D   PEA P     
Sbjct: 61  DKFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQDDFTSSDDEDVPEAVPAPAPT 120

Query: 121 --DAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDENANG--GE 180
              A  +A  +  K       K       + K   D  DE DDEDE   DD++  G   +
Sbjct: 121 AVTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDSEKGMDVD 180

Query: 181 EDDTDDDENEFSGDDSDKTDNEESDDSLAEDEQTPKKAE-ASKKRPLESANKTPAADKKA 240
           EDD+DDDE E S D+              E+E+TPKK E  +KKRP ES +KTP + KKA
Sbjct: 181 EDDSDDDEEEDSEDE--------------EEEETPKKPEPINKKRPNESVSKTPVSGKKA 240

Query: 241 K-----LVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKSCKR 284
           K       TPQKT+ KK  GH ATPHP+K+ GK+P     N  Q+PKS G +    + K+
Sbjct: 241 KPAAAPASTPQKTEEKKKGGHTATPHPAKKGGKSPV----NANQSPKSGGQSSGGNNNKK 285

[Close]

BLAST of Moc05g30620 vs. TAIR 10
Match: AT5G22650.2 (histone deacetylase 2B )

HSP 1 Score: 142.5 bits (358), Expect = 5.5e-34
Identity = 127/304 (41.78%), Postives = 162/304 (53.29%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60
           MEFWG  V       V+P E+ ++H+SQA L +   K  E V L V VG  KLV+GTLS 
Sbjct: 1   MEFWGVAVTPKNATKVTPEEDSLVHISQASL-DCTVKSGESVVLSVTVGGAKLVIGTLSQ 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGNT--------DSEEDIPVAAVDNGKPEAQPKK--- 120
           +KFPQ+SFDLVFDKEFELSH+    N         + E+D   ++ D   PEA P     
Sbjct: 61  DKFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQDDFTSSDDEDVPEAVPAPAPT 120

Query: 121 --DAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDENANG--GE 180
              A  +A  +  K       K       + K   D  DE DDEDE   DD++  G   +
Sbjct: 121 AVTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDSEKGMDVD 180

Query: 181 EDDTDDDENEFSGDDSDKTDNEESDDSLAEDEQTPKKAE-ASKKRPLESANKTPAADKKA 240
           EDD+DDDE E S D+              E+E+TPKK E  +KKRP ES +KTP + KKA
Sbjct: 181 EDDSDDDEEEDSEDE--------------EEEETPKKPEPINKKRPNESVSKTPVSGKKA 240

Query: 241 K-----LVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKSCKR 284
           K       TPQKT+ KK  GH ATPHP+K+ GK+P     N  Q+PKS G +    + K+
Sbjct: 241 KPAAAPASTPQKTE-KKKGGHTATPHPAKKGGKSPV----NANQSPKSGGQSSGGNNNKK 284

[Close]

BLAST of Moc05g30620 vs. TAIR 10
Match: AT3G44750.2 (histone deacetylase 3 )

HSP 1 Score: 139.4 bits (350), Expect = 4.6e-33
Identity = 124/300 (41.33%), Postives = 160/300 (53.33%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60
           MEFWG EVK G+P+ V+P E  ++H+SQA LGE + K  E V L+VKVGNQ LVLGTLS+
Sbjct: 1   MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGNTDSEEDIPVAAVDNGKPEAQPKKDAKPDASGSKR 120
           E  PQ+  DLVFDKEFELSH W  G+        V  V    P  +P+        G   
Sbjct: 61  ENIPQLFCDLVFDKEFELSHTWGKGS--------VYFVGYKTPNIEPQ--------GYSE 120

Query: 121 KVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDENANGGEEDDTDDDENEFSGDD 180
           + +   P  + + ++   K           E + ++DD      EED++D D     G D
Sbjct: 121 EEEEEVPAGNAAKAVAKPKAK-------PAEVKPAVDD------EEDESDSD-----GMD 180

Query: 181 SDKTDNEESDDSLAEDEQTPKKAEASKKRPLESANKTPAADKKAKL-VTPQKTDGKKVVG 240
            D +D E+S+    E+E TPKK  +SKKR  E+  K P + KKAK+ VTPQKTD KK  G
Sbjct: 181 EDDSDGEDSE----EEEPTPKKPASSKKRANETTPKAPVSAKKAKVAVTPQKTDEKKKGG 240

Query: 241 HVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKSCKRAFGSEGALQSHTKAKHSAEK 300
             A                    Q+PKSA     C SCK+ F S  AL+SH KAKH+A K
Sbjct: 241 KAA-------------------NQSPKSA-SQVSCGSCKKTFNSGNALESHNKAKHAAAK 242

The following BLAST results are available for this feature:

BLAST of Moc05g30620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144751.1	1.4e-148	94.01	histone deacetylase HDT1 [Momordica charantia]	[more]
XP_038905525.1	2.2e-122	80.44	histone deacetylase HDT1 [Benincasa hispida]	[more]
XP_008442794.1	1.1e-121	79.81	PREDICTED: histone deacetylase HDT1 [Cucumis melo]	[more]
XP_023540314.1	1.8e-119	79.75	histone deacetylase HDT1 [Cucurbita pepo subsp. pepo]	[more]
XP_022946410.1	4.0e-119	79.44	histone deacetylase HDT1 [Cucurbita moschata]	[more]

BLAST of Moc05g30620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6V9I6	1.3e-59	49.23	Histone deacetylase HDT1 OS=Solanum chacoense OX=4108 GN=HDT1 PE=2 SV=1	[more]
Q9LZR5	4.3e-52	46.47	Histone deacetylase HDT3 OS=Arabidopsis thaliana OX=3702 GN=HDT3 PE=1 SV=2	[more]
Q9M4U5	1.1e-47	44.41	Histone deacetylase HDT2 OS=Zea mays OX=4577 GN=HDT2 PE=1 SV=1	[more]
Q8LJS2	1.6e-43	43.96	Histone deacetylase HDT1 OS=Glycine max OX=3847 GN=HDT1 PE=2 SV=1	[more]
O24591	2.0e-41	43.60	Histone deacetylase HDT1 OS=Zea mays OX=4577 GN=HDT1 PE=1 SV=1	[more]

BLAST of Moc05g30620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CUC4	6.7e-149	94.01	histone deacetylase HDT1 OS=Momordica charantia OX=3673 GN=LOC111014365 PE=3 SV=...	[more]
A0A1S3B626	5.4e-122	79.81	histone deacetylase HDT1 OS=Cucumis melo OX=3656 GN=LOC103486568 PE=3 SV=1	[more]
A0A6J1G3S8	1.9e-119	79.44	histone deacetylase HDT1 OS=Cucurbita moschata OX=3662 GN=LOC111450473 PE=3 SV=1	[more]
A0A6J1KU46	7.3e-119	79.13	histone deacetylase HDT1-like OS=Cucurbita maxima OX=3661 GN=LOC111498681 PE=3 S...	[more]
A0A0A0LEE5	3.6e-118	78.37	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G748810 P...	[more]

BLAST of Moc05g30620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03740.1	3.1e-53	46.47	histone deacetylase 2C	[more]
AT3G44750.1	2.9e-35	40.39	histone deacetylase 3	[more]
AT5G22650.1	3.8e-35	41.78	histone deacetylase 2B	[more]
AT5G22650.2	5.5e-34	41.78	histone deacetylase 2B	[more]
AT3G44750.2	4.6e-33	41.33	histone deacetylase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 271..298 e-value: 2.0E-5 score: 26.7
None	No IPR available	GENE3D	2.60.120.340	Nucleoplasmin core domain	coord: 1..88 e-value: 1.4E-13 score: 53.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..138
None	No IPR available	PANTHER	PTHR31802	32 KDA HEAT SHOCK PROTEIN-RELATED	coord: 1..293
None	No IPR available	PANTHER	PTHR31802:SF27	DEACETYLASE 2A, PUTATIVE-RELATED	coord: 1..293
IPR041232	Nucleoplasmin-like domain	PFAM	PF17800	NPL	coord: 3..83 e-value: 3.0E-10 score: 40.7
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 274..295
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 272..299 score: 12.507586

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g30620.1	Moc05g30620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:0010162	seed dormancy process
cellular_component	GO:0005730	nucleolus