Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGACGGATATCAAGCACACCATTATTATGATGGGGTCCTGAAGTTCAATGGAGAGAATTTCAGTTTTTGGAAAATGCAGGTAAAGGATCTTCTTACATGCAAGAAGATACACAAGACTTTAGGGGAGAGACCAGCAGGGATGCTGGACAAGGATTGGAATGAGATGGATGAGCAGGCCGGTGCCAACATCATAATGACATTATCAATGAATGTTTGTAGTCTGGTGGCGAAAGAGACTACATCGAAAGATTTGTTGAAGGCCTTGCAAGACAGGTATGAAAAACCTTCTGTCAATACAAAGATACTTCTATGGACGAAGTATTTTAATATCCACATGGAGGAGAGAATCTCGGTGAATTCCCACATCAATGAACTCACTGATATCTTGAATAAGTTAGAAGGGATGAGCGTCAAGATTGACGAGGAGGTGAAAGTTATGAGGTTGTTAACGTCTTTGCCTGACAGTTGGGAGAAGATGAAGACCGCGGTGTCGAATTCGCTAGGGGAAAATAGCTTGAAATTTACAGCTATTTGTTATGCCGCCATATCTGAGGAAGCCCGGAGAAAATTAGGGAAAATTTCTGCATCTACTTCAGGGGCAGAAACCGGGGTTGAATCAGCTTTGGTAGCTCAGAACAAAGGGAAGGCAAATATGAGTTATAATGGGAAACAGCAGCAGAGATATAGCAGGGGTAGTGGGAGTTCCAATGGAGAAGTAGAGTATTATTACTGCCACAAAAAGGGATACATTAAACACTTTTGTAGGAAGTTTAAAGAAGATCTTGAGAAGGGGAATACTACTGCAAACGTTGTAACAGAAGAAGAACGGATTGAAGAGTTTCTGGCTTGTGTTCAGAGGAACATATCTGTAGACCAATGGGTGGTTGACACTGGACGTTGGTTCTCATCTCTTAGTGTAGGTGATTATGGCTCAGTGAAGATGGGGAATGAGAGTATCTCCAAGGTGAGAGGAATTGAAGATGTTTGTTTGAAGACAGGCAAAGGGGACGAGTTGGTGCTACGAGGTGTTAGGTATATTCCTAGCTTCAGATTTAATTTGTTATCCGCAGGAAAGCTAGGTGACGATGGCTACAGCAGTGAGTTTAATGGGGGTTGCTGGAAGCTCGGAGGGAATCCAGGGTGGTGGCAATAGGCCACAAAAGATCTTCTGTTTATGTATCAGAATTTGGGGTTGCCAAGGGTTCACTGAGACAGACGATGCACATAGTAGCAGCAGATGGTTCAGGGCGAGACCTTAGAGGATCAGCAGCAATGATGGCCAGAACAGATCAGAAGAATCTGCCATCAGCTCAAGTAAAACAGTTGAGAAGTACAGAAAAGCGAAACAAGAATTTGATAGGCTATCGAGTTCATACCTCAGTTGTCAGACGTTCAGGCGAGCTGATGAAGTTGCATAGGCGAATTAGTGCATTGAAGGGTACGAGTTATGTTTCTAGTGTGGCGACTGACTTGGGTGGAAGCGTCAAGTCATCAGAGGAATCTTCCTTCAGAGGTCGTTGGGTTCGATCGAGAAAGGAAGTGACGGGGACCACTTAA
mRNA sequence
ATGTGTGACGGATATCAAGCACACCATTATTATGATGGGGTCCTGAAGTTCAATGGAGAGAATTTCAGTTTTTGGAAAATGCAGGTAAAGGATCTTCTTACATGCAAGAAGATACACAAGACTTTAGGGGAGAGACCAGCAGGGATGCTGGACAAGGATTGGAATGAGATGGATGAGCAGGCCGGTGCCAACATCATAATGACATTATCAATGAATGTTTGTAGTCTGGTGGCGAAAGAGACTACATCGAAAGATTTGTTGAAGGCCTTGCAAGACAGGTATGAAAAACCTTCTGTCAATACAAAGATACTTCTATGGACGAAGTATTTTAATATCCACATGGAGGAGAGAATCTCGGTGAATTCCCACATCAATGAACTCACTGATATCTTGAATAAGTTAGAAGGGATGAGCGTCAAGATTGACGAGGAGGTGAAAGTTATGAGGTTGTTAACGTCTTTGCCTGACAGTTGGGAGAAGATGAAGACCGCGGTGTCGAATTCGCTAGGGGAAAATAGCTTGAAATTTACAGCTATTTGTTATGCCGCCATATCTGAGGAAGCCCGGAGAAAATTAGGGAAAATTTCTGCATCTACTTCAGGGGCAGAAACCGGGGTTGAATCAGCTTTGGTAGCTCAGAACAAAGGGAAGGCAAATATGAGTTATAATGGGAAACAGCAGCAGAGATATAGCAGGGGTAGTGGGAGTTCCAATGGAGAAGTAGAGTATTATTACTGCCACAAAAAGGGATACATTAAACACTTTTGTAGGAAGTTTAAAGAAGATCTTGAGAAGGGGAATACTACTGCAAACGTTGTAACAGAAGAAGAACGGATTGAAGAGTTTCTGGCTTGTGTTCAGAGGAACATATCTGTAGACCAATGGGTGGTTGACACTGGACGTTGGGTGGTGGCAATAGGCCACAAAAGATCTTCTGTTTATGTATCAGAATTTGGGGTTGCCAAGGGTTCACTGAGACAGACGATGCACATAGTAGCAGCAGATGGTTCAGGGCGAGACCTTAGAGGATCAGCAGCAATGATGGCCAGAACAGATCAGAAGAATCTGCCATCAGCTCAAGTAAAACAGTTGAGAAGTACAGAAAAGCGAAACAAGAATTTGATAGGCTATCGAGTTCATACCTCAGTTGTCAGACGTTCAGGCGAGCTGATGAAGTTGCATAGGCGAATTAGTGCATTGAAGGGTACGAGTTATGTTTCTAGTGTGGCGACTGACTTGGGTGGAAGCGTCAAGTCATCAGAGGAATCTTCCTTCAGAGGTCGTTGGGTTCGATCGAGAAAGGAAGTGACGGGGACCACTTAA
Coding sequence (CDS)
ATGTGTGACGGATATCAAGCACACCATTATTATGATGGGGTCCTGAAGTTCAATGGAGAGAATTTCAGTTTTTGGAAAATGCAGGTAAAGGATCTTCTTACATGCAAGAAGATACACAAGACTTTAGGGGAGAGACCAGCAGGGATGCTGGACAAGGATTGGAATGAGATGGATGAGCAGGCCGGTGCCAACATCATAATGACATTATCAATGAATGTTTGTAGTCTGGTGGCGAAAGAGACTACATCGAAAGATTTGTTGAAGGCCTTGCAAGACAGGTATGAAAAACCTTCTGTCAATACAAAGATACTTCTATGGACGAAGTATTTTAATATCCACATGGAGGAGAGAATCTCGGTGAATTCCCACATCAATGAACTCACTGATATCTTGAATAAGTTAGAAGGGATGAGCGTCAAGATTGACGAGGAGGTGAAAGTTATGAGGTTGTTAACGTCTTTGCCTGACAGTTGGGAGAAGATGAAGACCGCGGTGTCGAATTCGCTAGGGGAAAATAGCTTGAAATTTACAGCTATTTGTTATGCCGCCATATCTGAGGAAGCCCGGAGAAAATTAGGGAAAATTTCTGCATCTACTTCAGGGGCAGAAACCGGGGTTGAATCAGCTTTGGTAGCTCAGAACAAAGGGAAGGCAAATATGAGTTATAATGGGAAACAGCAGCAGAGATATAGCAGGGGTAGTGGGAGTTCCAATGGAGAAGTAGAGTATTATTACTGCCACAAAAAGGGATACATTAAACACTTTTGTAGGAAGTTTAAAGAAGATCTTGAGAAGGGGAATACTACTGCAAACGTTGTAACAGAAGAAGAACGGATTGAAGAGTTTCTGGCTTGTGTTCAGAGGAACATATCTGTAGACCAATGGGTGGTTGACACTGGACGTTGGGTGGTGGCAATAGGCCACAAAAGATCTTCTGTTTATGTATCAGAATTTGGGGTTGCCAAGGGTTCACTGAGACAGACGATGCACATAGTAGCAGCAGATGGTTCAGGGCGAGACCTTAGAGGATCAGCAGCAATGATGGCCAGAACAGATCAGAAGAATCTGCCATCAGCTCAAGTAAAACAGTTGAGAAGTACAGAAAAGCGAAACAAGAATTTGATAGGCTATCGAGTTCATACCTCAGTTGTCAGACGTTCAGGCGAGCTGATGAAGTTGCATAGGCGAATTAGTGCATTGAAGGGTACGAGTTATGTTTCTAGTGTGGCGACTGACTTGGGTGGAAGCGTCAAGTCATCAGAGGAATCTTCCTTCAGAGGTCGTTGGGTTCGATCGAGAAAGGAAGTGACGGGGACCACTTAA
Protein sequence
MCDGYQAHHYYDGVLKFNGENFSFWKMQVKDLLTCKKIHKTLGERPAGMLDKDWNEMDEQAGANIIMTLSMNVCSLVAKETTSKDLLKALQDRYEKPSVNTKILLWTKYFNIHMEERISVNSHINELTDILNKLEGMSVKIDEEVKVMRLLTSLPDSWEKMKTAVSNSLGENSLKFTAICYAAISEEARRKLGKISASTSGAETGVESALVAQNKGKANMSYNGKQQQRYSRGSGSSNGEVEYYYCHKKGYIKHFCRKFKEDLEKGNTTANVVTEEERIEEFLACVQRNISVDQWVVDTGRWVVAIGHKRSSVYVSEFGVAKGSLRQTMHIVAADGSGRDLRGSAAMMARTDQKNLPSAQVKQLRSTEKRNKNLIGYRVHTSVVRRSGELMKLHRRISALKGTSYVSSVATDLGGSVKSSEESSFRGRWVRSRKEVTGTT
Homology
BLAST of Moc05g22820 vs. NCBI nr
Match:
RVW65849.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 181.0 bits (458), Expect = 2.2e-41
Identity = 121/339 (35.69%), Postives = 183/339 (53.98%), Query Frame = 0
Query: 13 GVLKFNGENFSFWKMQVKDLLTCKKIH-KTLGERPAGMLDKDWNEMDEQAGANIIMTLSM 72
G+ KF+G +F++W+MQ+KD L +K+H LG +P M ++W +D Q I +TLS
Sbjct: 10 GIEKFDGTDFAYWRMQIKDYLYGRKLHLPLLGTKPKSMKAEEWALLDRQVLGVIRLTLSR 69
Query: 73 NVCSLVAKETTSKDLLKALQDRYEKPSVNTKILLWTKYFNIHMEERISVNSHINELTDIL 132
+V V KE T+ DL+KAL YEKPS N K+ L K FN+ M E SV H+NE I
Sbjct: 70 SVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 129
Query: 133 NKLEGMSVKIDEEVKVMRLLTSLPDSWEKMKTAVSNSLGENSLKFTAICYAAISEEARRK 192
N+L + + D+E++ + +L SLP+SWE M+ AVSNS G+ LK+ I +++E RR+
Sbjct: 130 NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAKEIRRR 189
Query: 193 LGKISASTSGAETGVESALVAQNKGKAN--MSYNGKQQQRYS---RGSGSSNGEVEYYYC 252
+G +G SAL + +G+ N S G+ R S R S +V+ + C
Sbjct: 190 -------DAGETSGSGSALNLETRGRGNNRNSNQGRSNSRNSNRNRSKSRSGQQVQSWNC 249
Query: 253 HKKGYIKHFCRKFKEDLEKGNTTANVVTEEERIEEFLACVQRNISVDQWVVDTGRWVVAI 312
K G+ K C+ K+ E + +ANVVTEE +++ L V + +D WV+D+G
Sbjct: 250 GKTGHFKRQCKSLKKKNE--DDSANVVTEE--VQDALLLVV-DSPLDDWVLDSGASFHTT 309
Query: 313 GHKR--SSVYVSEFGVAKGSLRQTMHIVAADGSGRDLRG 344
H+ + +FG + ADGS D+ G
Sbjct: 310 PHREIIQNYVAGDFG----------KVYLADGSALDVVG 326
BLAST of Moc05g22820 vs. NCBI nr
Match:
CAN81130.1 (hypothetical protein VITISV_003944 [Vitis vinifera])
HSP 1 Score: 180.6 bits (457), Expect = 2.9e-41
Identity = 121/339 (35.69%), Postives = 181/339 (53.39%), Query Frame = 0
Query: 13 GVLKFNGENFSFWKMQVKDLLTCKKIH-KTLGERPAGMLDKDWNEMDEQAGANIIMTLSM 72
G+ KF+G +F++W+MQ++D L +K+H LG +P M ++W +D Q I +TLS
Sbjct: 10 GIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSR 69
Query: 73 NVCSLVAKETTSKDLLKALQDRYEKPSVNTKILLWTKYFNIHMEERISVNSHINELTDIL 132
+V V KE T+ DL+KAL YEKPS N K+ L TK FN+ M E SV H+NE I
Sbjct: 70 SVAHNVVKEKTTXDLMKALSGMYEKPSANNKVHLMTKLFNLKMAENASVAQHLNEFNTIT 129
Query: 133 NKLEGMSVKIDEEVKVMRLLTSLPDSWEKMKTAVSNSLGENSLKFTAICYAAISEEARRK 192
N+L + + D+E++ + +L SLP+SWE M+ AVSNS G+ LK+ I ++EE RR+
Sbjct: 130 NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRR 189
Query: 193 LGKISASTSGAETGVESALVAQNKGKAN--MSYNGKQQQRYS---RGSGSSNGEVEYYYC 252
+G +G SAL + +G+ N S G+ R S R S +V+ + C
Sbjct: 190 -------DAGETSGSGSALNLETRGRGNNRNSNQGRSNSRNSNRNRSKSRSGQQVQCWNC 249
Query: 253 HKKGYIKHFCRKFKEDLEKGNTTANVVTEEERIEEFLACVQRNISVDQWVVDTGRWVVAI 312
K G+ K C+ K+ E + +AN VTEE + LA + +D WV+D+G
Sbjct: 250 GKTGHFKRQCKSPKKKNE--DDSANAVTEEVQDALLLAV---DSPLDDWVLDSGASFHTT 309
Query: 313 GHKR--SSVYVSEFGVAKGSLRQTMHIVAADGSGRDLRG 344
H+ + +FG + ADGS D+ G
Sbjct: 310 PHREIIQNYVAGDFG----------KVYLADGSALDVVG 326
BLAST of Moc05g22820 vs. NCBI nr
Match:
KAG7584790.1 (Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa])
HSP 1 Score: 180.6 bits (457), Expect = 2.9e-41
Identity = 114/312 (36.54%), Postives = 169/312 (54.17%), Query Frame = 0
Query: 13 GVLKFNGENFSFWKMQVKDLLTCKKIHKTLGERPAGMLDKDWNEMDEQAGANIIMTLSMN 72
G+ KF+G +F+FW+MQ++D L KK+H+ L +P M ++W+ +D Q I +TLS N
Sbjct: 10 GIGKFDGTDFAFWRMQIEDYLYGKKLHQPLSMKPEKMAQEEWDLLDRQVLGVIRLTLSKN 69
Query: 73 VCSLVAKETTSKDLLKALQDRYEKPSVNTKILLWTKYFNIHMEERISVNSHINELTDILN 132
V VAKE T++ L+K L D YEKPS N K+ L K F++ MEE V +H+NE I+N
Sbjct: 70 VAHNVAKEKTTEGLMKVLSDMYEKPSANNKVFLMKKLFHLKMEEGGPVATHVNEFNTIVN 129
Query: 133 KLEGMSVKIDEEVKVMRLLTSLPDSWEKMKTAVSNSLGENSLKFTAICYAAISEEARRKL 192
+L + ++ D+EV+ + LL SLP+SWE M+ AVSNS+G LKF + + EE RR
Sbjct: 130 QLSSVEIEFDDEVRALILLASLPNSWEPMRAAVSNSVGNQKLKFVDVRDRILGEEVRR-- 189
Query: 193 GKISASTSGAETGVESALVAQNKGKANMSYN---GKQQQRYSRGSGSSNGEVEYYYCHKK 252
ET + SA +N+G+ N G+ + R +G S VE + C K
Sbjct: 190 ------IDTGETSMSSAFNVENRGRDQNRRNQNRGRSKSRNGKGQSKSRKPVECWNCGKT 249
Query: 253 GYIKHFC-RKFKEDLEKGNTTANVVTEE---------------ERIEEFLACVQRNIS-- 301
G+ K C K++ KG AN VT+E E + + + +IS
Sbjct: 250 GHFKSNCWAPPKKENNKGG-GANAVTDEIADALLVFVDSPRKGETHDTAVNTTKASISYV 309
BLAST of Moc05g22820 vs. NCBI nr
Match:
CAN60106.1 (hypothetical protein VITISV_028182 [Vitis vinifera])
HSP 1 Score: 179.9 bits (455), Expect = 4.9e-41
Identity = 121/339 (35.69%), Postives = 181/339 (53.39%), Query Frame = 0
Query: 13 GVLKFNGENFSFWKMQVKDLLTCKKIH-KTLGERPAGMLDKDWNEMDEQAGANIIMTLSM 72
G+ KF+G +F++W+MQ++D L +K+H LG +P M ++W +D Q I +TLS
Sbjct: 10 GIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSR 69
Query: 73 NVCSLVAKETTSKDLLKALQDRYEKPSVNTKILLWTKYFNIHMEERISVNSHINELTDIL 132
+V V KE T+ DL+KAL YEKPS N K+ L K FN+ M E SV H+NE I
Sbjct: 70 SVAHNVVKEKTTTDLMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 129
Query: 133 NKLEGMSVKIDEEVKVMRLLTSLPDSWEKMKTAVSNSLGENSLKFTAICYAAISEEARRK 192
N+L + + D+E++ + +L SLP+SWE M+ AVSNS G+ LK+ I ++EE RR+
Sbjct: 130 NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRR 189
Query: 193 LGKISASTSGAETGVESALVAQNKGKAN--MSYNGKQQQRYS---RGSGSSNGEVEYYYC 252
+G +G SAL + +G+ N S G+ R S R S +V+ + C
Sbjct: 190 -------DAGETSGSGSALNLETRGRGNNRNSNQGRSNSRNSNRNRSKSRSGQQVQCWNC 249
Query: 253 HKKGYIKHFCRKFKEDLEKGNTTANVVTEEERIEEFLACVQRNISVDQWVVDTGRWVVAI 312
K G+ K C+ K+ E + +ANVVTEE + LA + +D WV+D+G
Sbjct: 250 GKTGHFKRQCKSPKKKNE--DDSANVVTEEVQDALLLAV---DSPLDDWVLDSGASFHTT 309
Query: 313 GHKR--SSVYVSEFGVAKGSLRQTMHIVAADGSGRDLRG 344
H+ + +FG + ADGS D+ G
Sbjct: 310 PHREIIQNYVAGDFG----------KVYLADGSALDVVG 326
BLAST of Moc05g22820 vs. NCBI nr
Match:
RVW80345.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 179.9 bits (455), Expect = 4.9e-41
Identity = 120/339 (35.40%), Postives = 180/339 (53.10%), Query Frame = 0
Query: 13 GVLKFNGENFSFWKMQVKDLLTCKKIH-KTLGERPAGMLDKDWNEMDEQAGANIIMTLSM 72
G+ KF+G +F++W+MQ++D L +K+H LG +P M ++W +D Q I +TLS
Sbjct: 10 GIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSR 69
Query: 73 NVCSLVAKETTSKDLLKALQDRYEKPSVNTKILLWTKYFNIHMEERISVNSHINELTDIL 132
+V V KE T+ DL+KAL YEKPS N K+ L K FN+ M E SV H+NE I
Sbjct: 70 SVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKKLFNLKMTENASVTQHLNEFNTIT 129
Query: 133 NKLEGMSVKIDEEVKVMRLLTSLPDSWEKMKTAVSNSLGENSLKFTAICYAAISEEARRK 192
N+L + + D+E++ + +L SLP+SWE M+ AVSNS G+ LK+ I ++EE RR+
Sbjct: 130 NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRR 189
Query: 193 LGKISASTSGAETGVESALVAQNKGKAN--MSYNGKQQQRYS---RGSGSSNGEVEYYYC 252
+G +G SAL + +G+ N S G+ R S R S +V+ + C
Sbjct: 190 -------DAGETSGSGSALNLETRGRGNNRNSNQGRSNSRNSNRNRSKSRSGQQVQCWNC 249
Query: 253 HKKGYIKHFCRKFKEDLEKGNTTANVVTEEERIEEFLACVQRNISVDQWVVDTGRWVVAI 312
K G+ K C+ K+ E + +AN VTEE + LA + +D WV+D+G
Sbjct: 250 GKTGHFKRQCKSPKKKNE--DDSANAVTEEVQDALLLAV---DSPLDDWVLDSGASFHTT 309
Query: 313 GHKR--SSVYVSEFGVAKGSLRQTMHIVAADGSGRDLRG 344
H+ + +FG + ADGS D+ G
Sbjct: 310 SHREIIQNYVAGDFG----------KVYLADGSALDVVG 326
BLAST of Moc05g22820 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 106.7 bits (265), Expect = 6.9e-22
Identity = 81/303 (26.73%), Postives = 151/303 (49.83%), Query Frame = 0
Query: 14 VLKFNGEN-FSFWKMQVKDLLTCKKIHKTL---GERPAGMLDKDWNEMDEQAGANIIMTL 73
V KFNG+N FS W+ +++DLL + +HK L ++P M +DW ++DE+A + I + L
Sbjct: 8 VAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIRLHL 67
Query: 74 SMNVCSLVAKETTSKDLLKALQDRYEKPSVNTKILLWTKYFNIHMEERISVNSHINELTD 133
S +V + + E T++ + L+ Y ++ K+ L + + +HM E + SH+N
Sbjct: 68 SDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNG 127
Query: 134 ILNKLEGMSVKIDEEVKVMRLLTSLPDSWEKMKTAVSNSLGENSLKFTAICYAAISEEAR 193
++ +L + VKI+EE K + LL SLP S++ + T + + G+ +++ + A + E
Sbjct: 128 LITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILH--GKTTIELKDVTSALLLNEKM 187
Query: 194 RKLGKISASTSGAETGVESALVAQNKGKANMSYNGKQQQRYSRGSGSSNGEVEY---YYC 253
RK G AL+ + +G++ + + +RG + + Y C
Sbjct: 188 RK----KPENQG------QALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNC 247
Query: 254 HKKGYIKHFC---RKFKEDL---EKGNTTANVVTEEERIEEFL----ACVQRNISVDQWV 300
++ G+ K C RK K + + + TA +V + + F+ C+ + +WV
Sbjct: 248 NQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWV 298
BLAST of Moc05g22820 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 78.2 bits (191), Expect = 2.6e-13
Identity = 58/252 (23.02%), Postives = 122/252 (48.41%), Query Frame = 0
Query: 17 FNGENFSFWKMQVKDLLTCKKIHKTLGERPAGMLDKDWNEMDEQAGANIIMTLSMNVCSL 76
F+GE ++ WK +++ LL + + K + +D W + + A + II LS + +
Sbjct: 11 FDGEKYAIWKFRIRALLAEQDVLKVVDGLMPNEVDDSWKKAERCAKSTIIEYLSDSFLNF 70
Query: 77 VAKETTSKDLLKALQDRYEKPSVNTKILLWTKYFNIHMEERISVNSHINELTDILNKLEG 136
+ T++ +L+ L YE+ S+ +++ L + ++ + +S+ SH + +++++L
Sbjct: 71 ATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHIFDELISELLA 130
Query: 137 MSVKIDEEVKVMRLLTSLPDSWEKMKTAVSNSLGENSLKFTAICYAAISEEARRKLGKIS 196
KI+E K+ LL +LP ++ + TA+ +L E +L + + +E KI
Sbjct: 131 AGAKIEEMDKISHLLITLPSCYDGIITAI-ETLSEENLTLAFVKNRLLDQEI-----KIK 190
Query: 197 ASTSGAETGVESALVAQNKGK-ANMSYNGKQQQRYSRGSGSSNGEVEYYYCHKKGYIKHF 256
+ V +A+V N N + + + G+S +V+ ++C ++G+IK
Sbjct: 191 NDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIFKGNSKYKVKCHHCGREGHIKKD 250
Query: 257 CRKFKEDLEKGN 268
C +K L N
Sbjct: 251 CFHYKRILNNKN 256
BLAST of Moc05g22820 vs. ExPASy TrEMBL
Match:
A0A7N2R8N6 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 182.2 bits (461), Expect = 4.8e-42
Identity = 120/339 (35.40%), Postives = 184/339 (54.28%), Query Frame = 0
Query: 13 GVLKFNGENFSFWKMQVKDLLTCKKIH-KTLGERPAGMLDKDWNEMDEQAGANIIMTLSM 72
G+ KF+G +F FW+MQ++D L +K+H LGE+P M ++W +D Q I +TLS
Sbjct: 10 GIEKFDGTDFGFWRMQIEDYLYGRKLHLPLLGEKPEAMKAEEWALLDRQVLGVIRLTLSR 69
Query: 73 NVCSLVAKETTSKDLLKALQDRYEKPSVNTKILLWTKYFNIHMEERISVNSHINELTDIL 132
+V V KE T+ DL+KAL YEKPS N K+ L K FN+ M E SV H+NE I
Sbjct: 70 SVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 129
Query: 133 NKLEGMSVKIDEEVKVMRLLTSLPDSWEKMKTAVSNSLGENSLKFTAICYAAISEEARRK 192
N+L + + D+E++ + +L SLP+SWE M+ AVSNS G+ LK+ I ++EE RR+
Sbjct: 130 NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRR 189
Query: 193 LGKISASTSGAETGVESALVAQNKGKAN--MSYNGKQQQR---YSRGSGSSNGEVEYYYC 252
+G +G SAL + +G+ N S G+ + R ++R S +++ + C
Sbjct: 190 -------DAGETSGSGSALTLETRGRGNNRNSNWGRSKSRNSNWNRSKSRSGQQIQCWNC 249
Query: 253 HKKGYIKHFCRKFKEDLEKGNTTANVVTEEERIEEFLACVQRNISVDQWVVDTGRWVVAI 312
K G+ ++ C+ K+ E + +ANVVTEE + LA + +D WV+D+G
Sbjct: 250 GKTGHFRNQCKSPKKKNE--DDSANVVTEEVQDALLLAV---DSPLDDWVLDSGASFHTT 309
Query: 313 GHKR--SSVYVSEFGVAKGSLRQTMHIVAADGSGRDLRG 344
H+ + +FG + ADGS D+ G
Sbjct: 310 PHREIIQNYVAGDFG----------KVYLADGSALDVVG 326
BLAST of Moc05g22820 vs. ExPASy TrEMBL
Match:
A0A438G0V1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_4008 PE=4 SV=1)
HSP 1 Score: 181.0 bits (458), Expect = 1.1e-41
Identity = 121/339 (35.69%), Postives = 183/339 (53.98%), Query Frame = 0
Query: 13 GVLKFNGENFSFWKMQVKDLLTCKKIH-KTLGERPAGMLDKDWNEMDEQAGANIIMTLSM 72
G+ KF+G +F++W+MQ+KD L +K+H LG +P M ++W +D Q I +TLS
Sbjct: 10 GIEKFDGTDFAYWRMQIKDYLYGRKLHLPLLGTKPKSMKAEEWALLDRQVLGVIRLTLSR 69
Query: 73 NVCSLVAKETTSKDLLKALQDRYEKPSVNTKILLWTKYFNIHMEERISVNSHINELTDIL 132
+V V KE T+ DL+KAL YEKPS N K+ L K FN+ M E SV H+NE I
Sbjct: 70 SVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 129
Query: 133 NKLEGMSVKIDEEVKVMRLLTSLPDSWEKMKTAVSNSLGENSLKFTAICYAAISEEARRK 192
N+L + + D+E++ + +L SLP+SWE M+ AVSNS G+ LK+ I +++E RR+
Sbjct: 130 NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAKEIRRR 189
Query: 193 LGKISASTSGAETGVESALVAQNKGKAN--MSYNGKQQQRYS---RGSGSSNGEVEYYYC 252
+G +G SAL + +G+ N S G+ R S R S +V+ + C
Sbjct: 190 -------DAGETSGSGSALNLETRGRGNNRNSNQGRSNSRNSNRNRSKSRSGQQVQSWNC 249
Query: 253 HKKGYIKHFCRKFKEDLEKGNTTANVVTEEERIEEFLACVQRNISVDQWVVDTGRWVVAI 312
K G+ K C+ K+ E + +ANVVTEE +++ L V + +D WV+D+G
Sbjct: 250 GKTGHFKRQCKSLKKKNE--DDSANVVTEE--VQDALLLVV-DSPLDDWVLDSGASFHTT 309
Query: 313 GHKR--SSVYVSEFGVAKGSLRQTMHIVAADGSGRDLRG 344
H+ + +FG + ADGS D+ G
Sbjct: 310 PHREIIQNYVAGDFG----------KVYLADGSALDVVG 326
BLAST of Moc05g22820 vs. ExPASy TrEMBL
Match:
A5BGX3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_003944 PE=4 SV=1)
HSP 1 Score: 180.6 bits (457), Expect = 1.4e-41
Identity = 121/339 (35.69%), Postives = 181/339 (53.39%), Query Frame = 0
Query: 13 GVLKFNGENFSFWKMQVKDLLTCKKIH-KTLGERPAGMLDKDWNEMDEQAGANIIMTLSM 72
G+ KF+G +F++W+MQ++D L +K+H LG +P M ++W +D Q I +TLS
Sbjct: 10 GIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSR 69
Query: 73 NVCSLVAKETTSKDLLKALQDRYEKPSVNTKILLWTKYFNIHMEERISVNSHINELTDIL 132
+V V KE T+ DL+KAL YEKPS N K+ L TK FN+ M E SV H+NE I
Sbjct: 70 SVAHNVVKEKTTXDLMKALSGMYEKPSANNKVHLMTKLFNLKMAENASVAQHLNEFNTIT 129
Query: 133 NKLEGMSVKIDEEVKVMRLLTSLPDSWEKMKTAVSNSLGENSLKFTAICYAAISEEARRK 192
N+L + + D+E++ + +L SLP+SWE M+ AVSNS G+ LK+ I ++EE RR+
Sbjct: 130 NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRR 189
Query: 193 LGKISASTSGAETGVESALVAQNKGKAN--MSYNGKQQQRYS---RGSGSSNGEVEYYYC 252
+G +G SAL + +G+ N S G+ R S R S +V+ + C
Sbjct: 190 -------DAGETSGSGSALNLETRGRGNNRNSNQGRSNSRNSNRNRSKSRSGQQVQCWNC 249
Query: 253 HKKGYIKHFCRKFKEDLEKGNTTANVVTEEERIEEFLACVQRNISVDQWVVDTGRWVVAI 312
K G+ K C+ K+ E + +AN VTEE + LA + +D WV+D+G
Sbjct: 250 GKTGHFKRQCKSPKKKNE--DDSANAVTEEVQDALLLAV---DSPLDDWVLDSGASFHTT 309
Query: 313 GHKR--SSVYVSEFGVAKGSLRQTMHIVAADGSGRDLRG 344
H+ + +FG + ADGS D+ G
Sbjct: 310 PHREIIQNYVAGDFG----------KVYLADGSALDVVG 326
BLAST of Moc05g22820 vs. ExPASy TrEMBL
Match:
A5ADV4 (CCHC-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_028182 PE=4 SV=1)
HSP 1 Score: 179.9 bits (455), Expect = 2.4e-41
Identity = 121/339 (35.69%), Postives = 181/339 (53.39%), Query Frame = 0
Query: 13 GVLKFNGENFSFWKMQVKDLLTCKKIH-KTLGERPAGMLDKDWNEMDEQAGANIIMTLSM 72
G+ KF+G +F++W+MQ++D L +K+H LG +P M ++W +D Q I +TLS
Sbjct: 10 GIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSR 69
Query: 73 NVCSLVAKETTSKDLLKALQDRYEKPSVNTKILLWTKYFNIHMEERISVNSHINELTDIL 132
+V V KE T+ DL+KAL YEKPS N K+ L K FN+ M E SV H+NE I
Sbjct: 70 SVAHNVVKEKTTTDLMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 129
Query: 133 NKLEGMSVKIDEEVKVMRLLTSLPDSWEKMKTAVSNSLGENSLKFTAICYAAISEEARRK 192
N+L + + D+E++ + +L SLP+SWE M+ AVSNS G+ LK+ I ++EE RR+
Sbjct: 130 NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRR 189
Query: 193 LGKISASTSGAETGVESALVAQNKGKAN--MSYNGKQQQRYS---RGSGSSNGEVEYYYC 252
+G +G SAL + +G+ N S G+ R S R S +V+ + C
Sbjct: 190 -------DAGETSGSGSALNLETRGRGNNRNSNQGRSNSRNSNRNRSKSRSGQQVQCWNC 249
Query: 253 HKKGYIKHFCRKFKEDLEKGNTTANVVTEEERIEEFLACVQRNISVDQWVVDTGRWVVAI 312
K G+ K C+ K+ E + +ANVVTEE + LA + +D WV+D+G
Sbjct: 250 GKTGHFKRQCKSPKKKNE--DDSANVVTEEVQDALLLAV---DSPLDDWVLDSGASFHTT 309
Query: 313 GHKR--SSVYVSEFGVAKGSLRQTMHIVAADGSGRDLRG 344
H+ + +FG + ADGS D+ G
Sbjct: 310 PHREIIQNYVAGDFG----------KVYLADGSALDVVG 326
BLAST of Moc05g22820 vs. ExPASy TrEMBL
Match:
A0A438H787 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2629 PE=4 SV=1)
HSP 1 Score: 179.9 bits (455), Expect = 2.4e-41
Identity = 120/339 (35.40%), Postives = 180/339 (53.10%), Query Frame = 0
Query: 13 GVLKFNGENFSFWKMQVKDLLTCKKIH-KTLGERPAGMLDKDWNEMDEQAGANIIMTLSM 72
G+ KF+G +F++W+MQ++D L +K+H LG +P M ++W +D Q I +TLS
Sbjct: 10 GIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSR 69
Query: 73 NVCSLVAKETTSKDLLKALQDRYEKPSVNTKILLWTKYFNIHMEERISVNSHINELTDIL 132
+V V KE T+ DL+KAL YEKPS N K+ L K FN+ M E SV H+NE I
Sbjct: 70 SVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKKLFNLKMTENASVTQHLNEFNTIT 129
Query: 133 NKLEGMSVKIDEEVKVMRLLTSLPDSWEKMKTAVSNSLGENSLKFTAICYAAISEEARRK 192
N+L + + D+E++ + +L SLP+SWE M+ AVSNS G+ LK+ I ++EE RR+
Sbjct: 130 NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRR 189
Query: 193 LGKISASTSGAETGVESALVAQNKGKAN--MSYNGKQQQRYS---RGSGSSNGEVEYYYC 252
+G +G SAL + +G+ N S G+ R S R S +V+ + C
Sbjct: 190 -------DAGETSGSGSALNLETRGRGNNRNSNQGRSNSRNSNRNRSKSRSGQQVQCWNC 249
Query: 253 HKKGYIKHFCRKFKEDLEKGNTTANVVTEEERIEEFLACVQRNISVDQWVVDTGRWVVAI 312
K G+ K C+ K+ E + +AN VTEE + LA + +D WV+D+G
Sbjct: 250 GKTGHFKRQCKSPKKKNE--DDSANAVTEEVQDALLLAV---DSPLDDWVLDSGASFHTT 309
Query: 313 GHKR--SSVYVSEFGVAKGSLRQTMHIVAADGSGRDLRG 344
H+ + +FG + ADGS D+ G
Sbjct: 310 SHREIIQNYVAGDFG----------KVYLADGSALDVVG 326
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
RVW65849.1 | 2.2e-41 | 35.69 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
CAN81130.1 | 2.9e-41 | 35.69 | hypothetical protein VITISV_003944 [Vitis vinifera] | [more] |
KAG7584790.1 | 2.9e-41 | 36.54 | Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa] | [more] |
CAN60106.1 | 4.9e-41 | 35.69 | hypothetical protein VITISV_028182 [Vitis vinifera] | [more] |
RVW80345.1 | 4.9e-41 | 35.40 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 6.9e-22 | 26.73 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 2.6e-13 | 23.02 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Match Name | E-value | Identity | Description | |
A0A7N2R8N6 | 4.8e-42 | 35.40 | Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
A0A438G0V1 | 1.1e-41 | 35.69 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
A5BGX3 | 1.4e-41 | 35.69 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_003944 PE=4 SV=1 | [more] |
A5ADV4 | 2.4e-41 | 35.69 | CCHC-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_028182 ... | [more] |
A0A438H787 | 2.4e-41 | 35.40 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
Match Name | E-value | Identity | Description | |