Moc05g22070 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g22070
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	CCHC-type domain-containing protein
Location	chr5: 15791936 .. 15792796 (-)
RNA-Seq Expression	Moc05g22070
Synteny	Moc05g22070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATTCTTTATGAGTCCAGTGAAGATTGACGTGGAGAAATTTGACGGAAGGATCAACTTTGACTTGTGGCAAGTGGAAGTCAAGGATGTGCTGATACAATCTGGGTTACACAAGGCGTTGAAGGGAAGACCGAGTGAAGGTGCTTCGGAAAAGCAAAGCGGTGATGGTGGTCCAATGGAGTCCAGTGGTGGTTCCAGCAGAGGTTCTAAGAAGTCTAGCATGAGTGATGAAGATTGGGAGGAAATGGATTTAAGAGCTGCAAGCGCGATACGAACAAGTTTGGCTAAGAATATTCTTGCGAATGTGCATGGAATTTCGACAGCCAAAGAACTTTGGGAGAAGCTCGAGGCGTTGTATCAGGCAAAGGGCATCTCAAATCGGCTGTACCTGAAGGAGCAGTTTCACACGCTGCAAATGGAGGAAGGTATGAAAATTTCAGATCATCTGAGTAATCTCAATAGCATCATCTTTGACCTGGAGGCGATCGAAGTGAAGATAGATGACGAAGATAAAGCACTCAGGCTCATTTTATCACTTCCACCTTCTTATGAACACATGAAGCCGATCTTGATGTATGGGAAGGATACTTTGAATTTTGCTGAGGTTACTAGTAAACTCTTGTCAGAGGAAAGAAGGCTGAAGAGTGAAGGGCGTACTTCACATGAAGATTCGGCACTGGTAGCTAGCAATTGGAAGAAGAAGAAAGACTCCGTACAAAAGAAAGCTTGTTGCTGGGGATGCGGACAGTCTGGACACATGAAGAAAGATTGTCCCAACAGAGCCGGTTCGTCAAAGGGTTTTGGGCGGGATGCTGACAATGTTTCTCTCATTAGGGGAGACGATGATCATATCCTTTGA

mRNA sequence

ATGTCATTCTTTATGAGTCCAGTGAAGATTGACGTGGAGAAATTTGACGGAAGGATCAACTTTGACTTGTGGCAAGTGGAAGTCAAGGATGTGCTGATACAATCTGGGTTACACAAGGCGTTGAAGGGAAGACCGAGTGAAGGTGCTTCGGAAAAGCAAAGCGGTGATGGTGGTCCAATGGAGTCCAGTGGTGGTTCCAGCAGAGGTTCTAAGAAGTCTAGCATGAGTGATGAAGATTGGGAGGAAATGGATTTAAGAGCTGCAAGCGCGATACGAACAAGTTTGGCTAAGAATATTCTTGCGAATGTGCATGGAATTTCGACAGCCAAAGAACTTTGGGAGAAGCTCGAGGCGTTGTATCAGGCAAAGGGCATCTCAAATCGGCTGTACCTGAAGGAGCAGTTTCACACGCTGCAAATGGAGGAAGGTATGAAAATTTCAGATCATCTGAGTAATCTCAATAGCATCATCTTTGACCTGGAGGCGATCGAAGTGAAGATAGATGACGAAGATAAAGCACTCAGGCTCATTTTATCACTTCCACCTTCTTATGAACACATGAAGCCGATCTTGATGTATGGGAAGGATACTTTGAATTTTGCTGAGGTTACTAGTAAACTCTTGTCAGAGGAAAGAAGGCTGAAGAGTGAAGGGCGTACTTCACATGAAGATTCGGCACTGGTAGCTAGCAATTGGAAGAAGAAGAAAGACTCCGTACAAAAGAAAGCTTGTTGCTGGGGATGCGGACAGTCTGGACACATGAAGAAAGATTGTCCCAACAGAGCCGGTTCGTCAAAGGGTTTTGGGCGGGATGCTGACAATGTTTCTCTCATTAGGGGAGACGATGATCATATCCTTTGA

Coding sequence (CDS)

ATGTCATTCTTTATGAGTCCAGTGAAGATTGACGTGGAGAAATTTGACGGAAGGATCAACTTTGACTTGTGGCAAGTGGAAGTCAAGGATGTGCTGATACAATCTGGGTTACACAAGGCGTTGAAGGGAAGACCGAGTGAAGGTGCTTCGGAAAAGCAAAGCGGTGATGGTGGTCCAATGGAGTCCAGTGGTGGTTCCAGCAGAGGTTCTAAGAAGTCTAGCATGAGTGATGAAGATTGGGAGGAAATGGATTTAAGAGCTGCAAGCGCGATACGAACAAGTTTGGCTAAGAATATTCTTGCGAATGTGCATGGAATTTCGACAGCCAAAGAACTTTGGGAGAAGCTCGAGGCGTTGTATCAGGCAAAGGGCATCTCAAATCGGCTGTACCTGAAGGAGCAGTTTCACACGCTGCAAATGGAGGAAGGTATGAAAATTTCAGATCATCTGAGTAATCTCAATAGCATCATCTTTGACCTGGAGGCGATCGAAGTGAAGATAGATGACGAAGATAAAGCACTCAGGCTCATTTTATCACTTCCACCTTCTTATGAACACATGAAGCCGATCTTGATGTATGGGAAGGATACTTTGAATTTTGCTGAGGTTACTAGTAAACTCTTGTCAGAGGAAAGAAGGCTGAAGAGTGAAGGGCGTACTTCACATGAAGATTCGGCACTGGTAGCTAGCAATTGGAAGAAGAAGAAAGACTCCGTACAAAAGAAAGCTTGTTGCTGGGGATGCGGACAGTCTGGACACATGAAGAAAGATTGTCCCAACAGAGCCGGTTCGTCAAAGGGTTTTGGGCGGGATGCTGACAATGTTTCTCTCATTAGGGGAGACGATGATCATATCCTTTGA

Protein sequence

MSFFMSPVKIDVEKFDGRINFDLWQVEVKDVLIQSGLHKALKGRPSEGASEKQSGDGGPMESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRTSLAKNILANVHGISTAKELWEKLEALYQAKGISNRLYLKEQFHTLQMEEGMKISDHLSNLNSIIFDLEAIEVKIDDEDKALRLILSLPPSYEHMKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALVASNWKKKKDSVQKKACCWGCGQSGHMKKDCPNRAGSSKGFGRDADNVSLIRGDDDHIL

Homology

[Close]

BLAST of Moc05g22070 vs. NCBI nr
Match: XP_022139673.1 (uncharacterized protein LOC111010521 [Momordica charantia])

HSP 1 Score: 481.5 bits (1238), Expect = 5.1e-132
Identity = 250/261 (95.79%), Postives = 252/261 (96.55%), Query Frame = 0


Query: 1   MSFFMSPVKIDVEKFDGRINFDLWQVEVKDVLIQSGLHKALKGRPSEGASEKQSGDGGPM 60
           MSFFMSPVKIDVEKFDG INF LWQV+VKDVLIQS LHKALKGRPSEGASEK S DGGPM
Sbjct: 295 MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPM 354

Query: 61  ESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRTSLAKNILANVHGISTAKELWEKLEALY 120
           ESSGGSSRGSKKSSMS EDWEEMDLRAASAIRTSLAKNILANVH ISTAKELWEKLEALY
Sbjct: 355 ESSGGSSRGSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALY 414

Query: 121 QAKGISNRLYLKEQFHTLQMEEGMKISDHLSNLNSIIFDLEAIEVKIDDEDKALRLILSL 180
           QAKGISNRLYLKEQFHTLQMEEGMKISDHLSNLNSIIF+LEAIEVKIDDEDKALRLILSL
Sbjct: 415 QAKGISNRLYLKEQFHTLQMEEGMKISDHLSNLNSIIFELEAIEVKIDDEDKALRLILSL 474

Query: 181 PPSYEHMKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALVASNWKKKKDSVQ 240
           P SYEHMKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALV SNWKKKKDSVQ
Sbjct: 475 PXSYEHMKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALVVSNWKKKKDSVQ 534

Query: 241 KKACCWGCGQSGHMKKDCPNR 262
           KKACCWGCGQSGHMKKDCPNR
Sbjct: 535 KKACCWGCGQSGHMKKDCPNR 555

[Close]

BLAST of Moc05g22070 vs. NCBI nr
Match: KAF5765959.1 (putative RNA-directed DNA polymerase [Helianthus annuus])

HSP 1 Score: 326.2 bits (835), Expect = 2.7e-85
Identity = 174/277 (62.82%), Postives = 210/277 (75.81%), Query Frame = 0


Query: 6   SPVKIDVEKFDGRINFDLWQVEVKDVLIQSGLHKALKGRPSEGASEKQSGDGGPMESSGG 65
           SP++ DVEK+DGRINF LWQV+VKDVLIQSGLHKAL+G+P+  +S+  SG          
Sbjct: 5   SPMRFDVEKYDGRINFGLWQVQVKDVLIQSGLHKALRGKPTPVSSKDSSG---------- 64

Query: 66  SSRGSKKSSMSDEDWEEMDLRAASAIRTSLAKNILANVHGISTAKELWEKLEALYQAKGI 125
                  S   DE+WE++DLRAASAIR  LAKN+LANVHGISTAK+LWEKLE LYQ KGI
Sbjct: 65  ------TSKDDDEEWEDLDLRAASAIRLCLAKNVLANVHGISTAKDLWEKLEQLYQGKGI 124

Query: 126 SNRLYLKEQFHTLQMEEGMKISDHLSNLNSIIFDLEAIEVKIDDEDKALRLILSLPPSYE 185
            NRLYLKEQFHTL+M+   KISDHLS LN+I+ +LEAI VK++DEDKALRLILSL  SYE
Sbjct: 125 PNRLYLKEQFHTLRMDGDTKISDHLSVLNNIVSELEAIGVKVEDEDKALRLILSLTSSYE 184

Query: 186 HMKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALVASNWKKKKDSVQKKACC 245
           HMKPILMYGK+TL +A+VT KLLSEE+RL S G TS E + L+  N KKK    QK   C
Sbjct: 185 HMKPILMYGKETLKYADVTEKLLSEEKRLGSSGHTSSEGTVLICGNGKKKHP--QKIPVC 244

Query: 246 WGCGQSGHMKKDCPNRAGSSKGFGRDADNVSLIRGDD 283
           W CGQSGH+K++CP  A S+    + A+NV+++ GDD
Sbjct: 245 WKCGQSGHVKRNCPGGADSASS-SKTANNVAVVDGDD 262

[Close]

BLAST of Moc05g22070 vs. NCBI nr
Match: KAF5758504.1 (putative RNA-directed DNA polymerase [Helianthus annuus])

HSP 1 Score: 324.7 bits (831), Expect = 8.0e-85
Identity = 174/277 (62.82%), Postives = 210/277 (75.81%), Query Frame = 0


Query: 6   SPVKIDVEKFDGRINFDLWQVEVKDVLIQSGLHKALKGRPSEGASEKQSGDGGPMESSGG 65
           SP++  VEK+DGRINF LWQV+VKDVLIQSGLHKAL+G+P+  +S+  SG          
Sbjct: 5   SPMRFVVEKYDGRINFGLWQVQVKDVLIQSGLHKALRGKPTPVSSKDSSG---------- 64

Query: 66  SSRGSKKSSMSDEDWEEMDLRAASAIRTSLAKNILANVHGISTAKELWEKLEALYQAKGI 125
                  S   DE+WE++DLRAASAIR  LAKN+LANVHGISTAK+LWEKLE LYQ KGI
Sbjct: 65  ------TSKDDDEEWEDLDLRAASAIRLCLAKNVLANVHGISTAKDLWEKLEQLYQGKGI 124

Query: 126 SNRLYLKEQFHTLQMEEGMKISDHLSNLNSIIFDLEAIEVKIDDEDKALRLILSLPPSYE 185
           SNRLYLKEQFHTL+M+   KISDHLS LN+I+ +LEAI VK++DEDKALRLILSL  SYE
Sbjct: 125 SNRLYLKEQFHTLRMDGDTKISDHLSVLNNIVSELEAIGVKVEDEDKALRLILSLTSSYE 184

Query: 186 HMKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALVASNWKKKKDSVQKKACC 245
           HMKPILMYGK+TL +A+VT KLLSEE+RL S G TS E + L+  N KKK    QK   C
Sbjct: 185 HMKPILMYGKETLKYADVTEKLLSEEKRLGSSGHTSSEGTVLICGNGKKKHP--QKIPVC 244

Query: 246 WGCGQSGHMKKDCPNRAGSSKGFGRDADNVSLIRGDD 283
           W CGQSGH+K++CP  A S+    + A+NV+++ GDD
Sbjct: 245 WKCGQSGHVKRNCPGGADSASN-SKTANNVAVVDGDD 262

[Close]

BLAST of Moc05g22070 vs. NCBI nr
Match: KAE8717380.1 (hypothetical protein F3Y22_tig00110050pilonHSYRG00143 [Hibiscus syriacus])

HSP 1 Score: 313.9 bits (803), Expect = 1.4e-81
Identity = 169/279 (60.57%), Postives = 206/279 (73.84%), Query Frame = 0


Query: 9   KIDVEKFDGRINFDLWQVEVKDVLIQSGLHKALKGRPSEGASEKQSGDGGPMESSGGSSR 68
           + D+EKFDGRINF LWQV+VKD+LIQSGL+KALKG+P+  +  K+     P +SSG    
Sbjct: 4   RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPASLSEGKEPDK--PSDSSGDKG- 63

Query: 69  GSKKSSMSDEDWEEMDLRAASAIRTSLAKNILANVHGISTAKELWEKLEALYQAKGISNR 128
              KS MS+E+WEE+D+RAAS IR  LAKN+LANV   S+ KELWEKLE +YQAK +SNR
Sbjct: 64  ---KSKMSEEEWEELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNR 123

Query: 129 LYLKEQFHTLQMEEGMKISDHLSNLNSIIFDLEAIEVKIDDEDKALRLILSLPPSYEHMK 188
           LYLKE+FH LQMEEG KISDHLS LN I+ +LE+I V+IDDEDKALRLI SLP SYEHM+
Sbjct: 124 LYLKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIWSLPSSYEHMQ 183

Query: 189 PILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALVASNWKKKKDSVQKKACCWGC 248
            +LMYGK+ +NF+EVTSKL+SEERRLK+    S E  AL     +KK    +KK  CWGC
Sbjct: 184 TVLMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKGSKKKIICWGC 243

Query: 249 GQSGHMKKDCPN-RAGSSKGFGRDADNVSLIRGDDDHIL 287
           GQ GH+KKDC N  A S+ G   DA NV +   +DD  +
Sbjct: 244 GQPGHLKKDCKNGGANSANGSKSDATNVVVFENEDDEFV 276

[Close]

BLAST of Moc05g22070 vs. NCBI nr
Match: KAF5463231.1 (hypothetical protein F2P56_019161 [Juglans regia])

HSP 1 Score: 313.5 bits (802), Expect = 1.8e-81
Identity = 173/283 (61.13%), Postives = 205/283 (72.44%), Query Frame = 0


Query: 8   VKIDVEKFDGRINFDLWQVEVKDVLIQSGLHKALKGRPSEGASEKQSGDGGPMESSGGSS 67
           ++ +VEKFDGRINF LWQV+VKDVLIQSGLHKALKGRP+   S   S           + 
Sbjct: 10  IRYEVEKFDGRINFGLWQVQVKDVLIQSGLHKALKGRPTPEVSSDTS----------VTD 69

Query: 68  RGSKKSSMSDEDWEEMDLRAASAIRTSLAKNILANVHGISTAKELWEKLEALYQAKGISN 127
           +   +S MSDEDWE++DLRAASAIR  LAKN+LAN+HGISTAK+LWEKLE LYQ KG+SN
Sbjct: 70  QTKSRSVMSDEDWEDLDLRAASAIRLCLAKNVLANIHGISTAKKLWEKLEELYQTKGVSN 129

Query: 128 RLYLKEQFHTLQMEEGMKISDHLSNLNSIIFDLEAIEVKIDDEDKALRLILSLPPSYEHM 187
           R+YLKEQFHTL M EG  ISDHLS LN I+ +LE+I VKIDDED+ALRLI SLP SYEHM
Sbjct: 130 RVYLKEQFHTLHMSEGTTISDHLSVLNGIVSELESIGVKIDDEDQALRLIWSLPSSYEHM 189

Query: 188 KPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALVASNWKKKKDSVQKKACCWG 247
           KPIL++GK+ + F+EVTSKL SEERRL         + A+V +   KKK+S++ K  CWG
Sbjct: 190 KPILIHGKEKIIFSEVTSKLFSEERRLGGGRNGPPVNLAMVVAGNGKKKNSMKMKVVCWG 249

Query: 248 CGQSGHMKKDCP----NRAGSSKGFGRDADN----VSLIRGDD 283
           CGQSGH+KK+CP      A  SK    D DN    VSL   DD
Sbjct: 250 CGQSGHVKKNCPRTGAGSASGSKSVNGDTDNETNVVSLSMEDD 282

[Close]

BLAST of Moc05g22070 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.6e-40
Identity = 103/300 (34.33%), Postives = 157/300 (52.33%), Query Frame = 0


Query: 5   MSPVKIDVEKFDGRINFDLWQVEVKDVLIQSGLHKALKGRPSEGASEKQSGDGGPMESSG 64
           MS VK +V KF+G   F  WQ  ++D+LIQ GLHK L                       
Sbjct: 1   MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVL----------------------- 60

Query: 65  GSSRGSKKSSMSDEDWEEMDLRAASAIRTSLAKNILANVHGISTAKELWEKLEALYQAKG 124
                 K  +M  EDW ++D RAASAIR  L+ +++ N+    TA+ +W +LE+LY +K 
Sbjct: 61  -DVDSKKPDTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKT 120

Query: 125 ISNRLYLKEQFHTLQMEEGMKISDHLSNLNSIIFDLEAIEVKIDDEDKALRLILSLPPSY 184
           ++N+LYLK+Q + L M EG     HL+  N +I  L  + VKI++EDKA+ L+ SLP SY
Sbjct: 121 LTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSY 180

Query: 185 EHMKPILMYGKDTLNFAEVTSKLLSEERRLK----------SEGR-----TSHEDSALVA 244
           +++   +++GK T+   +VTS LL  E+  K          +EGR      S  +     
Sbjct: 181 DNLATTILHGKTTIELKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSG 240

Query: 245 SNWKKKKDSVQKKACCWGCGQSGHMKKDCPN---RAGSSKGFGRDADNVSLIRGDDDHIL 287
           +  K K  S  +   C+ C Q GH K+DCPN     G + G   D +  ++++ +D+ +L
Sbjct: 241 ARGKSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVL 276

[Close]

BLAST of Moc05g22070 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 79.0 bits (193), Expect = 1.0e-13
Identity = 64/274 (23.36%), Postives = 129/274 (47.08%), Query Frame = 0


Query: 5   MSPVKIDVEKFDGRINFDLWQVEVKDVLIQSGLHKALKG-RPSEGASEKQSGDGGPMESS 64
           M   K +++ FDG   + +W+  ++ +L +  + K + G  P+E                
Sbjct: 1   MDKAKRNIKPFDGE-KYAIWKFRIRALLAEQDVLKVVDGLMPNE---------------- 60

Query: 65  GGSSRGSKKSSMSDEDWEEMDLRAASAIRTSLAKNILANVHGISTAKELWEKLEALYQAK 124
                        D+ W++ +  A S I   L+ + L       TA+++ E L+A+Y+ K
Sbjct: 61  ------------VDDSWKKAERCAKSTIIEYLSDSFLNFATSDITARQILENLDAVYERK 120

Query: 125 GISNRLYLKEQFHTLQMEEGMKISDHLSNLNSIIFDLEAIEVKIDDEDKALRLILSLPPS 184
            ++++L L+++  +L++   M +  H    + +I +L A   KI++ DK   L+++LP  
Sbjct: 121 SLASQLALRKRLLSLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSC 180

Query: 185 YEH-MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHED--SALVASNWKKKKDSVQ 244
           Y+  +  I    ++ L  A V ++LL +E ++K++   + +   +A+V +N    K+++ 
Sbjct: 181 YDGIITAIETLSEENLTLAFVKNRLLDQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLF 240

Query: 245 K----------------KACCWGCGQSGHMKKDC 259
           K                K  C  CG+ GH+KKDC
Sbjct: 241 KNRVTKPKKIFKGNSKYKVKCHHCGREGHIKKDC 245

[Close]

BLAST of Moc05g22070 vs. ExPASy TrEMBL
Match: A0A6J1CG82 (uncharacterized protein LOC111010521 OS=Momordica charantia OX=3673 GN=LOC111010521 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.5e-132
Identity = 250/261 (95.79%), Postives = 252/261 (96.55%), Query Frame = 0


Query: 1   MSFFMSPVKIDVEKFDGRINFDLWQVEVKDVLIQSGLHKALKGRPSEGASEKQSGDGGPM 60
           MSFFMSPVKIDVEKFDG INF LWQV+VKDVLIQS LHKALKGRPSEGASEK S DGGPM
Sbjct: 295 MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPM 354

Query: 61  ESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRTSLAKNILANVHGISTAKELWEKLEALY 120
           ESSGGSSRGSKKSSMS EDWEEMDLRAASAIRTSLAKNILANVH ISTAKELWEKLEALY
Sbjct: 355 ESSGGSSRGSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALY 414

Query: 121 QAKGISNRLYLKEQFHTLQMEEGMKISDHLSNLNSIIFDLEAIEVKIDDEDKALRLILSL 180
           QAKGISNRLYLKEQFHTLQMEEGMKISDHLSNLNSIIF+LEAIEVKIDDEDKALRLILSL
Sbjct: 415 QAKGISNRLYLKEQFHTLQMEEGMKISDHLSNLNSIIFELEAIEVKIDDEDKALRLILSL 474

Query: 181 PPSYEHMKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALVASNWKKKKDSVQ 240
           P SYEHMKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALV SNWKKKKDSVQ
Sbjct: 475 PXSYEHMKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALVVSNWKKKKDSVQ 534

Query: 241 KKACCWGCGQSGHMKKDCPNR 262
           KKACCWGCGQSGHMKKDCPNR
Sbjct: 535 KKACCWGCGQSGHMKKDCPNR 555

[Close]

BLAST of Moc05g22070 vs. ExPASy TrEMBL
Match: A0A6A3BK59 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110050pilonHSYRG00143 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 6.8e-82
Identity = 169/279 (60.57%), Postives = 206/279 (73.84%), Query Frame = 0


Query: 9   KIDVEKFDGRINFDLWQVEVKDVLIQSGLHKALKGRPSEGASEKQSGDGGPMESSGGSSR 68
           + D+EKFDGRINF LWQV+VKD+LIQSGL+KALKG+P+  +  K+     P +SSG    
Sbjct: 4   RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPASLSEGKEPDK--PSDSSGDKG- 63

Query: 69  GSKKSSMSDEDWEEMDLRAASAIRTSLAKNILANVHGISTAKELWEKLEALYQAKGISNR 128
              KS MS+E+WEE+D+RAAS IR  LAKN+LANV   S+ KELWEKLE +YQAK +SNR
Sbjct: 64  ---KSKMSEEEWEELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNR 123

Query: 129 LYLKEQFHTLQMEEGMKISDHLSNLNSIIFDLEAIEVKIDDEDKALRLILSLPPSYEHMK 188
           LYLKE+FH LQMEEG KISDHLS LN I+ +LE+I V+IDDEDKALRLI SLP SYEHM+
Sbjct: 124 LYLKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIWSLPSSYEHMQ 183

Query: 189 PILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALVASNWKKKKDSVQKKACCWGC 248
            +LMYGK+ +NF+EVTSKL+SEERRLK+    S E  AL     +KK    +KK  CWGC
Sbjct: 184 TVLMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKGSKKKIICWGC 243

Query: 249 GQSGHMKKDCPN-RAGSSKGFGRDADNVSLIRGDDDHIL 287
           GQ GH+KKDC N  A S+ G   DA NV +   +DD  +
Sbjct: 244 GQPGHLKKDCKNGGANSANGSKSDATNVVVFENEDDEFV 276

[Close]

BLAST of Moc05g22070 vs. ExPASy TrEMBL
Match: A0A6A3CWI3 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00001713pilonHSYRG00162 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 5.8e-81
Identity = 168/279 (60.22%), Postives = 204/279 (73.12%), Query Frame = 0


Query: 9   KIDVEKFDGRINFDLWQVEVKDVLIQSGLHKALKGRPSEGASEKQSGDGGPMESSGGSSR 68
           + D+EKFDGRINF LWQV+VKD+LIQSGL+KALKG+P+  +  K+     P +SSG    
Sbjct: 4   RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPASLSEGKEPDK--PSDSSGDKG- 63

Query: 69  GSKKSSMSDEDWEEMDLRAASAIRTSLAKNILANVHGISTAKELWEKLEALYQAKGISNR 128
              KS MS+E+WEE+D+RAAS IR  LAKN+LANV   S+ KELWEKLE +YQAK +SNR
Sbjct: 64  ---KSKMSEEEWEELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNR 123

Query: 129 LYLKEQFHTLQMEEGMKISDHLSNLNSIIFDLEAIEVKIDDEDKALRLILSLPPSYEHMK 188
           LYLKE+FH LQMEEG KISDHLS LN I+ +LE+I V IDDEDKALRLI SLP SYEHM+
Sbjct: 124 LYLKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVDIDDEDKALRLIWSLPSSYEHMQ 183

Query: 189 PILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALVASNWKKKKDSVQKKACCWGC 248
            +LMYGK+ +NF+EVTSKL+SEERRLK+    S E  AL     +KK    +KK  CWGC
Sbjct: 184 TVLMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKGSKKKIICWGC 243

Query: 249 GQSGHMKKDCPN-RAGSSKGFGRDADNVSLIRGDDDHIL 287
           GQ GH+KKDC N  A  + G   DA NV +   +DD  +
Sbjct: 244 GQPGHLKKDCKNGGANLANGSKSDATNVVVFENEDDEFV 276

[Close]

BLAST of Moc05g22070 vs. ExPASy TrEMBL
Match: A0A6A2YS90 (Transcription initiation factor IIA subunit 2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111273pilonHSYRG00172 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 5.8e-81
Identity = 168/279 (60.22%), Postives = 205/279 (73.48%), Query Frame = 0


Query: 9   KIDVEKFDGRINFDLWQVEVKDVLIQSGLHKALKGRPSEGASEKQSGDGGPMESSGGSSR 68
           + D+EKFDGRINF LWQV+VKD+LIQSGL+KALKG+P+  +  K+     P +SSG    
Sbjct: 90  RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPASLSEGKEPDK--PSDSSGDKG- 149

Query: 69  GSKKSSMSDEDWEEMDLRAASAIRTSLAKNILANVHGISTAKELWEKLEALYQAKGISNR 128
              KS MS+E+WEE+D+RAAS IR  LAKN+LANV   S+ KELWEKLE +YQAK +SNR
Sbjct: 150 ---KSKMSEEEWEELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNR 209

Query: 129 LYLKEQFHTLQMEEGMKISDHLSNLNSIIFDLEAIEVKIDDEDKALRLILSLPPSYEHMK 188
           LYLKE+FH LQMEEG KISDHLS LN I+ +LE+I V+IDDEDKALRLI SL  SYEHM+
Sbjct: 210 LYLKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIWSLSSSYEHMQ 269

Query: 189 PILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALVASNWKKKKDSVQKKACCWGC 248
            +LMYGK+ +NF+EVTSKL+SEERRLK+    S E  AL     +KK    +KK  CWGC
Sbjct: 270 TVLMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKGSKKKIICWGC 329

Query: 249 GQSGHMKKDCPN-RAGSSKGFGRDADNVSLIRGDDDHIL 287
           GQ GH+KKDC N  A S+ G   DA NV +   +DD  +
Sbjct: 330 GQPGHLKKDCKNGGANSANGSKSDATNVVVFENEDDEFV 362

[Close]

BLAST of Moc05g22070 vs. ExPASy TrEMBL
Match: A0A6A3DA47 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00000132pilonHSYRG00093 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 9.8e-81
Identity = 168/276 (60.87%), Postives = 204/276 (73.91%), Query Frame = 0


Query: 9   KIDVEKFDGRINFDLWQVEVKDVLIQSGLHKALKGRPSEGASEKQSGDGGPMESSGGSSR 68
           + D+EKFDGRINF LWQV+VKD+LIQSGL+KALKG+P+     K+     P +SSG    
Sbjct: 4   RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPASLFEGKEPDK--PSDSSGDKG- 63

Query: 69  GSKKSSMSDEDWEEMDLRAASAIRTSLAKNILANVHGISTAKELWEKLEALYQAKGISNR 128
              KS MS+E+WEE+D+RAAS IR  LAKN+LANV   S+ KELWEKLE +YQAK +SNR
Sbjct: 64  ---KSKMSEEEWEELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNR 123

Query: 129 LYLKEQFHTLQMEEGMKISDHLSNLNSIIFDLEAIEVKIDDEDKALRLILSLPPSYEHMK 188
           LYLKE+FH LQMEEG KISDHLS LN I+ +LE+I V+IDDEDKALRLI SLP SYEHM+
Sbjct: 124 LYLKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIWSLPSSYEHMQ 183

Query: 189 PILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALVASNWKKKKDSVQKKACCWGC 248
            +LMYGK+ +NF+EVTSKL+SEERRLK+    S E  AL     +KK    ++K  CWGC
Sbjct: 184 TVLMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVFGNRKKYKGSKRKIICWGC 243

Query: 249 GQSGHMKKDCPN-RAGSSKGFGRDADNVSLIRGDDD 284
           GQ GH+KKDC N  A S+ G   DA NV +   +DD
Sbjct: 244 GQPGHLKKDCKNGGANSANGSKSDATNVVVFENEDD 273

The following BLAST results are available for this feature:

BLAST of Moc05g22070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139673.1	5.1e-132	95.79	uncharacterized protein LOC111010521 [Momordica charantia]	[more]
KAF5765959.1	2.7e-85	62.82	putative RNA-directed DNA polymerase [Helianthus annuus]	[more]
KAF5758504.1	8.0e-85	62.82	putative RNA-directed DNA polymerase [Helianthus annuus]	[more]
KAE8717380.1	1.4e-81	60.57	hypothetical protein F3Y22_tig00110050pilonHSYRG00143 [Hibiscus syriacus]	[more]
KAF5463231.1	1.8e-81	61.13	hypothetical protein F2P56_019161 [Juglans regia]	[more]

BLAST of Moc05g22070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.6e-40	34.33	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.0e-13	23.36	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Moc05g22070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CG82	2.5e-132	95.79	uncharacterized protein LOC111010521 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6A3BK59	6.8e-82	60.57	CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0...	[more]
A0A6A3CWI3	5.8e-81	60.22	CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0...	[more]
A0A6A2YS90	5.8e-81	60.22	Transcription initiation factor IIA subunit 2 OS=Hibiscus syriacus OX=106335 GN=...	[more]
A0A6A3DA47	9.8e-81	60.87	CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0...	[more]

BLAST of Moc05g22070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 244..260 e-value: 0.0033 score: 26.6
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 245..260 score: 10.855963
None	No IPR available	GENE3D	4.10.60.10		coord: 217..272 e-value: 1.4E-5 score: 26.8
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 80..216 e-value: 5.3E-36 score: 123.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..71
None	No IPR available	PANTHER	PTHR34676:SF6	SUBFAMILY NOT NAMED	coord: 5..248
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 5..248
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 235..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g22070.1	Moc05g22070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044271	cellular nitrogen compound biosynthetic process
biological_process	GO:0044267	cellular protein metabolic process
biological_process	GO:0010467	gene expression
biological_process	GO:0009059	macromolecule biosynthetic process
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0008270	zinc ion binding