Moc05g13950 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g13950
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Plus3 domain-containing protein
Location	chr5: 10682557 .. 10683656 (-)
RNA-Seq Expression	Moc05g13950
Synteny	Moc05g13950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGACACTCTATTTATAGGTGGGAATCTGACAGCACTCACGACCGGTGGTTACATGTTCTTTCCCATATCGGACCTGTCAGGTTCCGAGTAGGTCGGTCCTCCCTCAGATCGGACTTCGGCATGTACACAGCCTTTTCCCCATGGGCGAACCCGACCTCTTCGGCAGGTTCGAGGGGACCTTGGATATTTAATCCTTATAACACCAGTAACCGTCCTCCACGTGTCTCAGGTAGTTTTACCCCCAAACATTGGCCCCCTCTCTATCAGGTTCGATCTCGACCTGACAGAGAAGTTCATCCGACTTGATTTTGGACACGTGGCGACTTCCAATTCGTAGAGAGGATATGACCGTTGCGGAAGACGTTTCGATCTGCCAGGCTGTCGGAGTACTCAAGTATTCCGTCGTTACGGATCTCGAGATGATCCTAGCTGCTCGTTCATTACACGTGTACAGTGCAGAGGTTTTTCCGATTAGCTATAAATAGTTCCGAGACTTCAGGTCAAACCTTACGTTCCCTGAATTTCTGGAGTTCGATCTGAAACCAGCTCGAACTCTTTCGTAGGTCAGTCACTTTTCCTTGTTTTTACTCTTGCTTTCAAATATGGTGGTTTTCTTATCTTCCCCTTCCAGTAGCGATAGCCTAGGTAGCGCAGGTCGGACTATAAGTAGTTCACCCCCCAAACCAAGTGATTCTGGGGAGGACTTAGCTCTTAGGTTAGAGTCCGAGCTGGAGGAGATAGCGAACTTTAGGTTTTCGGACGATGGGGAGGATAGCGATACTTCCACCTCGGGCTAGGGTTTGGAATACCCTTCAAAAATGCCTGAACACTACCTCGGACCCCTCCGTAGGGGGTTTAAAATCCCAAATGACATCCTCCTTAGGATTCTGGAGGAAGGGGAAAGAGCTGACAATCCTCCAGAGGGGTGTGTCACTCTTTACTTAAAAATGTTTGAGTACGGCCTCAGACTTCCCCTTCACCCTTTTGCCCAGGAGTTCCTCAACCGAACCGGACTGGCTCCTACTCAAGTGGCCCCAATGGATGGGGTGTCACTTTTGCGCTGGCCGTCCTTTTCTGGTTGCGAGCTTGAGATGTAG

mRNA sequence

ATGAGACACTCTATTTATAGGTGGGAATCTGACAGCACTCACGACCGGTGGTTACATGTTCTTTCCCATATCGGACCTGTCAGGTTCCGAGTAGGTCGGTCCTCCCTCAGATCGGACTTCGGCATGTACACAGCCTTTTCCCCATGGGCGAACCCGACCTCTTCGGCAGGTTCGAGGGGACCTTGGATATTTAATCCTTATAACACCAGTAACCGTCCTCCACGTGTCTCAGAGGATATGACCGTTGCGGAAGACGTTTCGATCTGCCAGGCTGTCGGAGTACTCAAGTATTCCGTCGTTACGGATCTCGAGATGATCCTAGCTGCTCGTTCATTACACGTGTACAGTGCAGAGGTCAGTCACTTTTCCTTGTTTTTACTCTTGCTTTCAAATATGGTGGTTTTCTTATCTTCCCCTTCCAGTAGCGATAGCCTAGGTAGCGCAGGTCGGACTATAAGTAGTTCACCCCCCAAACCAAGTGATTCTGGGGAGGACTTAGCTCTTAGGTTAGAGTCCGAGCTGGAGGAGATAGCGAACTTTAGGGGGTTTAAAATCCCAAATGACATCCTCCTTAGGATTCTGGAGGAAGGGGAAAGAGCTGACAATCCTCCAGAGGGGTGTGTCACTCTTTACTTAAAAATGTTTGAGTACGGCCTCAGACTTCCCCTTCACCCTTTTGCCCAGGAGTTCCTCAACCGAACCGGACTGGCTCCTACTCAAGTGGCCCCAATGGATGGGGTGTCACTTTTGCGCTGGCCGTCCTTTTCTGGTTGCGAGCTTGAGATGTAG

Coding sequence (CDS)

ATGAGACACTCTATTTATAGGTGGGAATCTGACAGCACTCACGACCGGTGGTTACATGTTCTTTCCCATATCGGACCTGTCAGGTTCCGAGTAGGTCGGTCCTCCCTCAGATCGGACTTCGGCATGTACACAGCCTTTTCCCCATGGGCGAACCCGACCTCTTCGGCAGGTTCGAGGGGACCTTGGATATTTAATCCTTATAACACCAGTAACCGTCCTCCACGTGTCTCAGAGGATATGACCGTTGCGGAAGACGTTTCGATCTGCCAGGCTGTCGGAGTACTCAAGTATTCCGTCGTTACGGATCTCGAGATGATCCTAGCTGCTCGTTCATTACACGTGTACAGTGCAGAGGTCAGTCACTTTTCCTTGTTTTTACTCTTGCTTTCAAATATGGTGGTTTTCTTATCTTCCCCTTCCAGTAGCGATAGCCTAGGTAGCGCAGGTCGGACTATAAGTAGTTCACCCCCCAAACCAAGTGATTCTGGGGAGGACTTAGCTCTTAGGTTAGAGTCCGAGCTGGAGGAGATAGCGAACTTTAGGGGGTTTAAAATCCCAAATGACATCCTCCTTAGGATTCTGGAGGAAGGGGAAAGAGCTGACAATCCTCCAGAGGGGTGTGTCACTCTTTACTTAAAAATGTTTGAGTACGGCCTCAGACTTCCCCTTCACCCTTTTGCCCAGGAGTTCCTCAACCGAACCGGACTGGCTCCTACTCAAGTGGCCCCAATGGATGGGGTGTCACTTTTGCGCTGGCCGTCCTTTTCTGGTTGCGAGCTTGAGATGTAG

Protein sequence

MRHSIYRWESDSTHDRWLHVLSHIGPVRFRVGRSSLRSDFGMYTAFSPWANPTSSAGSRGPWIFNPYNTSNRPPRVSEDMTVAEDVSICQAVGVLKYSVVTDLEMILAARSLHVYSAEVSHFSLFLLLLSNMVVFLSSPSSSDSLGSAGRTISSSPPKPSDSGEDLALRLESELEEIANFRGFKIPNDILLRILEEGERADNPPEGCVTLYLKMFEYGLRLPLHPFAQEFLNRTGLAPTQVAPMDGVSLLRWPSFSGCELEM

Homology

[Close]

BLAST of Moc05g13950 vs. NCBI nr
Match: XP_022159063.1 (uncharacterized protein LOC111025502, partial [Momordica charantia])

HSP 1 Score: 117.5 bits (293), Expect = 1.8e-22
Identity = 66/117 (56.41%), Postives = 70/117 (59.83%), Query Frame = 0


Query: 160 SDSGEDLALRLESELEEIANF---------------------------------RGFKIP 219
           S+   DLA RLES+LEEI N                                  RGF IP
Sbjct: 7   SNLESDLARRLESKLEEIENXRISDDGEDSDASTSGQGLEYPSRIPEHYLGSLRRGFAIP 66

Query: 220 NDILLRILEEGERADNPPEGCVTLYLKMFEYGLRLPLHPFAQEFLNRTGLAPTQVAP 244
            +ILLR+ EEGERADNPPEG VTLY KMFEYGLRLPLHPF QEFL RTGLAP QVAP
Sbjct: 67  ENILLRLPEEGERADNPPEGWVTLYFKMFEYGLRLPLHPFVQEFLFRTGLAPAQVAP 123

[Close]

BLAST of Moc05g13950 vs. NCBI nr
Match: XP_034205351.1 (uncharacterized protein LOC117619489 [Prunus dulcis])

HSP 1 Score: 68.6 bits (166), Expect = 9.4e-08
Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 171 ESELEEIANFRGFKIPNDILLRILEEGERADNPPEGCVTLYLKMFEYGLRLPLHPFAQEF 230
           E ELE +    G  IP+ I LR+L + E+A  PP+G V ++   F+ G RLPLHP+  +F
Sbjct: 24  EGELEHLRLEYG--IPDTIKLRLLRKDEKASQPPDGSVLIHPGFFKCGFRLPLHPYVHKF 83

Query: 231 LNRTGLAPTQVAP 244
           L   GLAP Q+ P
Sbjct: 84  LRTLGLAPMQINP 94

[Close]

BLAST of Moc05g13950 vs. NCBI nr
Match: VVA34561.1 (PREDICTED: L484_008711 [Prunus dulcis])

HSP 1 Score: 68.6 bits (166), Expect = 9.4e-08
Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 171 ESELEEIANFRGFKIPNDILLRILEEGERADNPPEGCVTLYLKMFEYGLRLPLHPFAQEF 230
           E ELE +    G  IP+ I LR+L + E+A  PP+G V ++   F+ G RLPLHP+  +F
Sbjct: 69  EGELEHLRLEYG--IPDTIKLRLLRKDEKASQPPDGSVLIHPGFFKCGFRLPLHPYVHKF 128

Query: 231 LNRTGLAPTQVAP 244
           L   GLAP Q+ P
Sbjct: 129 LRTLGLAPMQINP 139

[Close]

BLAST of Moc05g13950 vs. NCBI nr
Match: BBG96910.1 (hypothetical protein Prudu_005868, partial [Prunus dulcis])

HSP 1 Score: 68.6 bits (166), Expect = 9.4e-08
Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 171 ESELEEIANFRGFKIPNDILLRILEEGERADNPPEGCVTLYLKMFEYGLRLPLHPFAQEF 230
           E ELE +    G  IP+ I LR+L + E+A  PP+G V ++   F+ G RLPLHP+  +F
Sbjct: 58  EGELEHLRLEYG--IPDTIKLRLLRKDEKASQPPDGSVLIHPGFFKCGFRLPLHPYVHKF 117

Query: 231 LNRTGLAPTQVAP 244
           L   GLAP Q+ P
Sbjct: 118 LRTLGLAPMQINP 128

[Close]

BLAST of Moc05g13950 vs. NCBI nr
Match: TXG53679.1 (hypothetical protein EZV62_018935 [Acer yangbiense])

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-07
Identity = 36/103 (34.95%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 141 SSDSLGSAGRTISSSPPKPSDSGEDLALRLESELEEIANFRGFKIPNDILLRILEEGERA 200
           S+D  G +   ISS            +   ++ LE +   R + IPN+I+LR+ ++   A
Sbjct: 334 SNDDCGKSSEAISSEGEADWSIDAIRSTMTQTSLETLE--RSYGIPNNIVLRLPKKEHLA 393

Query: 201 DNPPEGCVTLYLKMFEYGLRLPLHPFAQEFLNRTGLAPTQVAP 244
            +PP+G VTL+   FE+GL+LP HPF +  L+    AP Q++P
Sbjct: 394 SSPPQGAVTLHSTFFEFGLKLPFHPFLRYMLSHLQCAPAQLSP 434

[Close]

BLAST of Moc05g13950 vs. ExPASy TrEMBL
Match: A0A6J1DXS5 (uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025502 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 8.6e-23
Identity = 66/117 (56.41%), Postives = 70/117 (59.83%), Query Frame = 0


Query: 160 SDSGEDLALRLESELEEIANF---------------------------------RGFKIP 219
           S+   DLA RLES+LEEI N                                  RGF IP
Sbjct: 7   SNLESDLARRLESKLEEIENXRISDDGEDSDASTSGQGLEYPSRIPEHYLGSLRRGFAIP 66

Query: 220 NDILLRILEEGERADNPPEGCVTLYLKMFEYGLRLPLHPFAQEFLNRTGLAPTQVAP 244
            +ILLR+ EEGERADNPPEG VTLY KMFEYGLRLPLHPF QEFL RTGLAP QVAP
Sbjct: 67  ENILLRLPEEGERADNPPEGWVTLYFKMFEYGLRLPLHPFVQEFLFRTGLAPAQVAP 123

[Close]

BLAST of Moc05g13950 vs. ExPASy TrEMBL
Match: A0A4Y1QYG5 (Uncharacterized protein (Fragment) OS=Prunus dulcis OX=3755 GN=Prudu_005868 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.6e-08
Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 171 ESELEEIANFRGFKIPNDILLRILEEGERADNPPEGCVTLYLKMFEYGLRLPLHPFAQEF 230
           E ELE +    G  IP+ I LR+L + E+A  PP+G V ++   F+ G RLPLHP+  +F
Sbjct: 58  EGELEHLRLEYG--IPDTIKLRLLRKDEKASQPPDGSVLIHPGFFKCGFRLPLHPYVHKF 117

Query: 231 LNRTGLAPTQVAP 244
           L   GLAP Q+ P
Sbjct: 118 LRTLGLAPMQINP 128

[Close]

BLAST of Moc05g13950 vs. ExPASy TrEMBL
Match: A0A5E4G454 (PREDICTED: L484_008711 OS=Prunus dulcis OX=3755 GN=ALMOND_2B008687 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.6e-08
Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 171 ESELEEIANFRGFKIPNDILLRILEEGERADNPPEGCVTLYLKMFEYGLRLPLHPFAQEF 230
           E ELE +    G  IP+ I LR+L + E+A  PP+G V ++   F+ G RLPLHP+  +F
Sbjct: 69  EGELEHLRLEYG--IPDTIKLRLLRKDEKASQPPDGSVLIHPGFFKCGFRLPLHPYVHKF 128

Query: 231 LNRTGLAPTQVAP 244
           L   GLAP Q+ P
Sbjct: 129 LRTLGLAPMQINP 139

[Close]

BLAST of Moc05g13950 vs. ExPASy TrEMBL
Match: A0A5C7HA73 (Plus3 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018935 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 6.0e-08
Identity = 36/103 (34.95%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 141 SSDSLGSAGRTISSSPPKPSDSGEDLALRLESELEEIANFRGFKIPNDILLRILEEGERA 200
           S+D  G +   ISS            +   ++ LE +   R + IPN+I+LR+ ++   A
Sbjct: 334 SNDDCGKSSEAISSEGEADWSIDAIRSTMTQTSLETLE--RSYGIPNNIVLRLPKKEHLA 393

Query: 201 DNPPEGCVTLYLKMFEYGLRLPLHPFAQEFLNRTGLAPTQVAP 244
            +PP+G VTL+   FE+GL+LP HPF +  L+    AP Q++P
Sbjct: 394 SSPPQGAVTLHSTFFEFGLKLPFHPFLRYMLSHLQCAPAQLSP 434

[Close]

BLAST of Moc05g13950 vs. ExPASy TrEMBL
Match: A0A2P6S9Y3 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0325301 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.3e-07
Identity = 26/74 (35.14%), Postives = 48/74 (64.86%), Query Frame = 0


Query: 171 ESELEEIANFR-GFKIPNDILLRILEEGERADNPPEGCVTLYLKMFEYGLRLPLHPFAQE 230
           E+ ++ +   R  ++IP+ + LR++++GE   +PP+G +TLY  M E G+R+P  PF   
Sbjct: 27  ETSVDALRELRWNYQIPDSVELRLIKDGELPSSPPDGFITLYPAMLELGIRIPFQPFVHG 86

Query: 231 FLNRTGLAPTQVAP 244
           +++  G+AP Q+ P
Sbjct: 87  WVSELGIAPAQINP 100

The following BLAST results are available for this feature:

BLAST of Moc05g13950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159063.1	1.8e-22	56.41	uncharacterized protein LOC111025502, partial [Momordica charantia]	[more]
XP_034205351.1	9.4e-08	45.21	uncharacterized protein LOC117619489 [Prunus dulcis]	[more]
VVA34561.1	9.4e-08	45.21	PREDICTED: L484_008711 [Prunus dulcis]	[more]
BBG96910.1	9.4e-08	45.21	hypothetical protein Prudu_005868, partial [Prunus dulcis]	[more]
TXG53679.1	1.2e-07	34.95	hypothetical protein EZV62_018935 [Acer yangbiense]	[more]

BLAST of Moc05g13950 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g13950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DXS5	8.6e-23	56.41	uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A4Y1QYG5	4.6e-08	45.21	Uncharacterized protein (Fragment) OS=Prunus dulcis OX=3755 GN=Prudu_005868 PE=4...	[more]
A0A5E4G454	4.6e-08	45.21	PREDICTED: L484_008711 OS=Prunus dulcis OX=3755 GN=ALMOND_2B008687 PE=4 SV=1	[more]
A0A5C7HA73	6.0e-08	34.95	Plus3 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018935 PE...	[more]
A0A2P6S9Y3	1.3e-07	35.14	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0325301 PE=4...	[more]

BLAST of Moc05g13950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g13950.1	Moc05g13950.1	mRNA