Moc05g13850 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g13850
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr5: 10618592 .. 10622860 (+)
RNA-Seq Expression	Moc05g13850
Synteny	Moc05g13850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCAACCCGCAAACTCGACCAATACGGCAGATCGAAGGACCCTAGCTGCCAGCGATGCCCACCAAAGGGAGGTCGGAGCAGCAGTGGTAGAGGGGCAAGGTCACGACGGCCTAGCAACAGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGTTTTACCACCTGCGCACCCCCCAAGGACATCCAAGGCCACCCGTGGCCGAGGTGGAACCTCTAAGAAGGGCGCCCGGGGTCCAGCCCCGGCCCTGACAAGTGAGAACTTGGACGCACTCCAGAGAGAAATGGAGGCAGTGCGCACGAAAATGGCTAAATTGCCTTTTCTTTTGTCACATACTCTCTCTTCAATGCCTTGATAAATGTTGTATTATGATGTTTGGGGTCCCTCCCCTGTGTCTTCATTTCAAGGATATTGCTATTATTTTAATTTTGTTGACGATTTTAGTAGATATACTTGGTTGTTCCCATTAGTTAATAAATCTGATGTGAGTAAAGTTCTTCAAAGTTTTGTTCCCTTTGCTGAGAATTTGCTTTCTTTTCGGCTCAAAGTTTATCGCACGGATAGTGGTGGAGAATTTATTAATTAACACCTCTATATCCAATTTTCTATCCTCCAATGGAGTCACCCATAAAAAATCTTGTCCCTGTACACCCGAACAAAATGGTGTCGCCGAACGTAAACACAAACGTATTGTCGAAACGACCCTTTCTTTACTTTGTACAGCCTTCATGCCTCTTGAATTTTGGGTTTATGCTTTCCAAACTGCTGTCTTTCTCATTAACTGCATGCCTATTTCGCCTTTAGATGGCCAATCTCCTTTCGAATGCCTATTTGGTTATTATCCTAACTTGCATCGTTTAAAGGTTTTTGGTTGTGTTTGCTTTCCTCTTCTTTGTCCTTACAATTCTCACAAATTTGAACCTCGTATAACTGAACATGTCTTTCTTGGCTATGCTTTAGAATACAAAGGCTGTCTTTGCTTCAATCCCTTAACTCAACACATCGTCGTAGCTCGACATGTTCTTTTTCATGAGCACATTTTTCCTTTTACTACCTTGCGAACTTCATCCCTTCTTCATCCAACATTTTTAATTTTGCCATTGATCCTTTCCCTTCTATTTTAGCCCATTCTTGGTCAGTTCCCACTTCTCCTTCTCCGTCTAGTACGCACATTCCCACCTTCGTTGGTTCTTCTCCTTCTTCTTCTACTTCTTCTTCTACGTCTTCTCCTGTTTTACCCAGCTCCAATACTTCTCCTTCTCCCATTGACTGTTCTCCTTCTATTTCTTCTCCAACTAATCCAACCACTTTAGCCAATATCATCCTAGCTATGTGTCCTTCGAGTAACGTCCATCCCATGCAAACAAGGGGTAAGTCGGGTATCTCTAAAAAGAAAGTCTTTCATATTGATGCTTCTTTGTCTGAACCCAAACCTTCCTGTTTCACTGAGGCTAACAAAAGTCCTAAATGGCGTCAAGTAATGGCTGACGAGTTTTCTGCTCTCGAACAACAAGGCACTTGGAGTCCAGTTTCTCCTACTCCAAACATGAATGTTATTGGCTGCAAATGGACGTTCCGTATTAATTATACTCCTGATGGTACTGTGTTGCGATATAAGGTTCGGTTGGTAGCTAAAGGTTATCCCCAAATTGAGGGTGTTGATTTTGAAGATACATTCAGCCTACTTATTAAGAAAACCACAATTCGAGATATAAGGCTCAGTTGGTAGCCAAAGGTTATCCTCAACTTCATGTGAAGAATGCCTTTCTTCATGGCTTCCTTAAAGAGGAGGTATATATGGTTCAACCGTCATGCTTTGTTGATTCTCTTCATCCTTTTCATGTGTGTCCTTTGCATAAGTCCTTGGTATGACCTTAAACAAGCTCCTCGGGAGTGGTTCGAGCGATTTACATCTCATTTATTGACTTTGGGATTTGTTGCTTCTTCAACTGATTGTTCTCTCTTTGTTCGTTCTGTTGGATCTTCCTTGACTTATCTCCTTCTCTACGTAGATGATATTATTGTTACAGGGCCGGATTCTTCTTACATATCTGCACTGAAAGATGAGCTTAATATTGAGTTTTATATTTCTGATATGGGGAATCTCACTTACTTCTTAGGGTTAAAAATCAAGCATTGTGGTTCTAATATCTTTGTTAATCAACACAAGTATTTGGCTGATTTATTGTTAAAAGCAGAGCTGGCTGGTGCTAAATCATATAGTACTCCTATGTCTATTGCTACTGACTTTTATGCCCATGTTCCTATGTTTGATAATCCCCAGCTTTATTGACAGCTTGTAGGCGCCTTGTAGTATCTCACTTCTACGCGGCTTGATATCTCGTTTGTTGTTAACAAGGTGAGTCAATTCATGAGTGAACCTTCCGTGATACATTACTTTGCTGTCAAGCGCATATTGAGGTATTTGTGTGGCACACCATCTCTTGGATTGTTATTCCGCCCTAGTTTTTGAGTTACAGGCTTATTGTGATGCGGATTGCACCAGTGATGCCTTGGATAAGAGGTCGGTTTCTAGCAATGTTCTATTTTTAGGTGGTAATCCTCTCTCTTGGTCTGCTAAGAAGCAAGCCACGGTGTCCCGATCTTCTACTGAAGCGGAGTATCGATCTCTTTCTTGCACTACAGCTGAATTATATTGGGTTCGTCAACTTTTTTGTGACTTATATTTTCTTGCCATCTACTCCTGTCCTGTTTTATGATTATGTTTCGGCTCTTGGCACTGTCCTATGCTCGCTTTCAATTGCTATGTTCCAAACTTTAACACTCTTTGGTTGCTAAAGTTTTGAGGGGGTGTATTAGTTGTTATGTATTCTACATTTAAATTAGTTAGCTAGATATATGTAAAATATGGTTATAGTATATTTGATTCAGTTAGAGTATAGTTACTTTGTATAAATAATGATGTATTTTCCTCTTGAATAGTGTGAAGAGAGATATTCAAAACAAGGGTTTGTTTCCCCTCACCCTTTATTTCCATTGTTGGGTGAGCTCCAACAATGCTATAACGCCCTGTCAAGAATGAAATAGAATCTGCACAAAGTTAAGGACACTAAATAGAATTAATCATACTATTTAATATAACTTAAGCTTTGAGTTTAACTTAAGTGATTCCACTAGAAAGTTTGAATTCTTCTCAATGTTTTCATCCATCAAACATTGGTGTGCCACTACTAGATCAAACACCTTGGAAAAGATGGACCGTGAGAGAAATATGCCTTGGAGAATTCTATCGCTTCAAGACCTAGTAGGAAAAGGAAAAAGATATGATGAAGAAAATATAAGGCAATGGAAGGGATGACAGTGTTAGTGGTACATCTATATATATCCAACATCACTCAGTACTTTTTAGCTATTCACATATCCTATTATTGTTAGATAACAAAATAATTACAAAGAAAATAACAAACTAAAACTAAATAAAAGAATAAGATGGCTAAGTATTTAACAAACTAAACCTAACCGCTCAAACTAATTATAGAATAAATAACAACAAAACAGAATTGTTAACCATGGTTATCTTAATAGAGTTAACTATAGTTTGTTAATTGTAGTTTAGTATTTACTTTTGTTTAGTTAGACAGTTTAGTTTGTAATCAACAAACTAAAATCTTGATGTTTAAATATCAACGTATCATAAGGAGGGTTCAACAATAAGGATCCTCTCCTCTCGCTAACAGAAAGCTTACATCTAATATGGAGCCCCCTCCAAGTGCCATGAAACTTTTCAATCACTCTTTTGCGATTTTTTTTATTACTTCTGTCATTAATCTAGCGATGAGGAATTTTACAGAGATTGATTTTTGTTTCAGAGAAACAAAAATACAAGCCAATCTTAATATTTTCTTCTCTCATATCAGTTTTATCGGCAGAAGAAGAAACAGAAACCGAAAAATAGGTAGATTTTATCGATTCATTCAAAAGCAAAAATGTAAATAAACCAATCTAAAACTACACTTTCACGTATAAAAATAAAAAAAAAAGAAGATTTACCTGAAGAACACCTCAAAGTAAAACTTGGAGGTCTTGAGCTTGAACCGAGCAAGCGGAACATAGTGTTCGAAAAGATGATGACTTCATCTTAAAGGCAAAGTCTCTTGTATGTGTACCGGAAGAGCTTTGTTGTGGATTTGTCCTTGCAAAATAGGTATCAGAAAAACAAAAGGTAGGAAGCATGAAGCTCAAAAATGGGTTTGTGAAGCGGTACGTTAAAGTAGAAACGAACCTGGTTTTGTGCGGTTTTTAG

mRNA sequence

ATGGTTCAACCCGCAAACTCGACCAATACGGCAGATCGAAGGACCCTAGCTGCCAGCGATGCCCACCAAAGGGAGGTCGGAGCAGCAGTGGTAGAGGGGCAAGGTCACGACGGCCTAGCAACAGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGTTTTACCACCTGCGCACCCCCCAAGGACATCCAAGGCCACCCGTGGCCGAGGTGGAACCTCTAAGAAGGGCGCCCGGGGTCCAGCCCCGGCCCTGACAAGTGAGAACTTGGACGCACTCCAGAGAGAAATGGAGGCAGTATCAGAAAAACAAAAGGTAGGAAGCATGAAGCTCAAAAATGGGTTTGTGAAGCGGTACGTTAAAGTAGAAACGAACCTGGTTTTGTGCGGTTTTTAG

Coding sequence (CDS)

ATGGTTCAACCCGCAAACTCGACCAATACGGCAGATCGAAGGACCCTAGCTGCCAGCGATGCCCACCAAAGGGAGGTCGGAGCAGCAGTGGTAGAGGGGCAAGGTCACGACGGCCTAGCAACAGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGTTTTACCACCTGCGCACCCCCCAAGGACATCCAAGGCCACCCGTGGCCGAGGTGGAACCTCTAAGAAGGGCGCCCGGGGTCCAGCCCCGGCCCTGACAAGTGAGAACTTGGACGCACTCCAGAGAGAAATGGAGGCAGTATCAGAAAAACAAAAGGTAGGAAGCATGAAGCTCAAAAATGGGTTTGTGAAGCGGTACGTTAAAGTAGAAACGAACCTGGTTTTGTGCGGTTTTTAG

Protein sequence

MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAPVLPPAHPPRTSKATRGRGGTSKKGARGPAPALTSENLDALQREMEAVSEKQKVGSMKLKNGFVKRYVKVETNLVLCGF

Homology

[Close]

BLAST of Moc05g13850 vs. NCBI nr
Match: XP_022159327.1 (uncharacterized protein LOC111025738 [Momordica charantia])

HSP 1 Score: 120.6 bits (301), Expect = 1.0e-23
Identity = 66/100 (66.00%), Postives = 75/100 (75.00%), Query Frame = 0


Query: 1   MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAPVLPPAHP 60
           MVQP +STNT DRR L A+D HQREVGA VVEGQ H+GL TEP  RSARIT P L PAH 
Sbjct: 1   MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAH- 60

Query: 61  PRTSKATRGRGGTSKKGARGPAPALTSENLDALQREMEAV 101
           P+  KA RGRGG S++   G APA + EN DALQ+EMEA+
Sbjct: 61  PKPFKANRGRGGASRRTTLGAAPAPSRENFDALQKEMEAM 99

[Close]

BLAST of Moc05g13850 vs. NCBI nr
Match: XP_022152854.1 (uncharacterized protein LOC111020479 [Momordica charantia])

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-17
Identity = 62/115 (53.91%), Postives = 72/115 (62.61%), Query Frame = 0


Query: 1   MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAPVLPPAHP 60
           MVQPANSTNTADRR LAA+  HQREVGA VVEGQGH+ L TEPL RSARIT PVLPPAH 
Sbjct: 1   MVQPANSTNTADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAH- 60

Query: 61  PRTSKATRGRGGTSKKGARGPAPALTSENLDALQREMEAVSEKQKVGSMKLKNGF 116
           P+ SKA       +          +T E  D L+ + +A  E  K    K ++ F
Sbjct: 61  PKPSKAESSYNPIT-------PGVITREEFDQLKSKFDAQVEALKARCEKKESSF 107

[Close]

BLAST of Moc05g13850 vs. NCBI nr
Match: XP_022156638.1 (uncharacterized protein LOC111023488 [Momordica charantia])

HSP 1 Score: 62.8 bits (151), Expect = 2.6e-06
Identity = 37/72 (51.39%), Postives = 44/72 (61.11%), Query Frame = 0


Query: 1  MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAPVLPPAHP 60
          MVQP  S NTA+RR L  ++  Q E+ A V E Q   G   +P RRS R    +LPPAH 
Sbjct: 1  MVQPIESANTAERRALNGNNDAQHELDAKVTEEQTKAGQEVDPPRRSTRNANTILPPAH- 60

Query: 61 PRTSKATRGRGG 73
          PR+ KA RGRGG
Sbjct: 61 PRSGKANRGRGG 71

[Close]

BLAST of Moc05g13850 vs. ExPASy TrEMBL
Match: A0A6J1DZJ1 (uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025738 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 5.1e-24
Identity = 66/100 (66.00%), Postives = 75/100 (75.00%), Query Frame = 0


Query: 1   MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAPVLPPAHP 60
           MVQP +STNT DRR L A+D HQREVGA VVEGQ H+GL TEP  RSARIT P L PAH 
Sbjct: 1   MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAH- 60

Query: 61  PRTSKATRGRGGTSKKGARGPAPALTSENLDALQREMEAV 101
           P+  KA RGRGG S++   G APA + EN DALQ+EMEA+
Sbjct: 61  PKPFKANRGRGGASRRTTLGAAPAPSRENFDALQKEMEAM 99

[Close]

BLAST of Moc05g13850 vs. ExPASy TrEMBL
Match: A0A6J1DHB3 (uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020479 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 7.1e-18
Identity = 62/115 (53.91%), Postives = 72/115 (62.61%), Query Frame = 0


Query: 1   MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAPVLPPAHP 60
           MVQPANSTNTADRR LAA+  HQREVGA VVEGQGH+ L TEPL RSARIT PVLPPAH 
Sbjct: 1   MVQPANSTNTADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAH- 60

Query: 61  PRTSKATRGRGGTSKKGARGPAPALTSENLDALQREMEAVSEKQKVGSMKLKNGF 116
           P+ SKA       +          +T E  D L+ + +A  E  K    K ++ F
Sbjct: 61  PKPSKAESSYNPIT-------PGVITREEFDQLKSKFDAQVEALKARCEKKESSF 107

[Close]

BLAST of Moc05g13850 vs. ExPASy TrEMBL
Match: A0A6J1DR60 (uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023488 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.3e-06
Identity = 37/72 (51.39%), Postives = 44/72 (61.11%), Query Frame = 0


Query: 1  MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAPVLPPAHP 60
          MVQP  S NTA+RR L  ++  Q E+ A V E Q   G   +P RRS R    +LPPAH 
Sbjct: 1  MVQPIESANTAERRALNGNNDAQHELDAKVTEEQTKAGQEVDPPRRSTRNANTILPPAH- 60

Query: 61 PRTSKATRGRGG 73
          PR+ KA RGRGG
Sbjct: 61 PRSGKANRGRGG 71

The following BLAST results are available for this feature:

BLAST of Moc05g13850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159327.1	1.0e-23	66.00	uncharacterized protein LOC111025738 [Momordica charantia]	[more]
XP_022152854.1	1.5e-17	53.91	uncharacterized protein LOC111020479 [Momordica charantia]	[more]
XP_022156638.1	2.6e-06	51.39	uncharacterized protein LOC111023488 [Momordica charantia]	[more]

BLAST of Moc05g13850 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g13850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZJ1	5.1e-24	66.00	uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DHB3	7.1e-18	53.91	uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1DR60	1.3e-06	51.39	uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of Moc05g13850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g13850.1	Moc05g13850.1	mRNA