Moc05g13710 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g13710
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr5: 10565873 .. 10566656 (-)
RNA-Seq Expression	Moc05g13710
Synteny	Moc05g13710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGCCACGGTACTGAATTCACTGGGAAACGCATGAAATTAGATGTATGTTTACTGTTTTTTCTTATGTTGTTATTTATCAAGCCAATGCAAATGGAAATGAGAACTTCAAGAAATTTCCACTTTCTCAGATGGAAGAGCAGGAAAAGGATACTGGCATGTCCAACATTATAGAAAACGAGCAGTGCGAGACGAGCATTAGGGGATCCGAGGAGATGGAATCAAATATAACTCGCCTACTTGAAAAGATTGAGAGCTTCACACAGCTGGTAGGTGGTGGCTACGCTCAATCCTTGTGGGCGGAAAATATGAGTTTGGCTGATAGGAATTAGCTAGCTATCTAACTTATCTTTCTGCGATTTTATATAATTGATTAAAAAGCTGGACCTCAGGTGATATTACAGCAATCTGTATTATTTTTTAGGGTTTATTTCTTTGCAAGTATTTTCTAGTCATCCACCATTAATTGTTTGTTGATGAAGGTGTCTGAACTCCTGGAGTCGGGAAAGACTGTTTTCAAAGATCTTAGTAATGAATTTGAAGAGAGAATCATAGCGTGAGTTGAAATTTGAATACATAGCCTCGAATATTTTTGTTGAGAACTATTTTCTTTTAACCTCATTTATTTTCTTTCTTTTTTCCCAGCATTCATAAGGATCATGTTGAAAAATGGCAACATGAGATCAAGGAACTGCGGTTGCTAGATTCATCAAATGAGGAAGCCAATACTATTTTATGCAATGCTCGAAATTTACTTCAGAATGGCCATACCGAGTTTTGA

mRNA sequence

ATGCAAAGCCACGGTACTGAATTCACTGGGAAACGCATGAAATTAGATATGGAAGAGCAGGAAAAGGATACTGGCATGTCCAACATTATAGAAAACGAGCAGTGCGAGACGAGCATTAGGGGATCCGAGGAGATGGAATCAAATATAACTCGCCTACTTGAAAAGATTGAGAGCTTCACACAGCTGGTGTCTGAACTCCTGGAGTCGGGAAAGACTGTTTTCAAAGATCTTAGTAATGAATTTGAAGAGAGAATCATAGCCATTCATAAGGATCATGTTGAAAAATGGCAACATGAGATCAAGGAACTGCGGTTGCTAGATTCATCAAATGAGGAAGCCAATACTATTTTATGCAATGCTCGAAATTTACTTCAGAATGGCCATACCGAGTTTTGA

Coding sequence (CDS)

ATGCAAAGCCACGGTACTGAATTCACTGGGAAACGCATGAAATTAGATATGGAAGAGCAGGAAAAGGATACTGGCATGTCCAACATTATAGAAAACGAGCAGTGCGAGACGAGCATTAGGGGATCCGAGGAGATGGAATCAAATATAACTCGCCTACTTGAAAAGATTGAGAGCTTCACACAGCTGGTGTCTGAACTCCTGGAGTCGGGAAAGACTGTTTTCAAAGATCTTAGTAATGAATTTGAAGAGAGAATCATAGCCATTCATAAGGATCATGTTGAAAAATGGCAACATGAGATCAAGGAACTGCGGTTGCTAGATTCATCAAATGAGGAAGCCAATACTATTTTATGCAATGCTCGAAATTTACTTCAGAATGGCCATACCGAGTTTTGA

Protein sequence

MQSHGTEFTGKRMKLDMEEQEKDTGMSNIIENEQCETSIRGSEEMESNITRLLEKIESFTQLVSELLESGKTVFKDLSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEANTILCNARNLLQNGHTEF

Homology

[Close]

BLAST of Moc05g13710 vs. NCBI nr
Match: XP_022152377.1 (uncharacterized protein LOC111020126 isoform X1 [Momordica charantia] >XP_022152378.1 uncharacterized protein LOC111020126 isoform X1 [Momordica charantia] >XP_022152379.1 uncharacterized protein LOC111020126 isoform X1 [Momordica charantia] >XP_022152380.1 uncharacterized protein LOC111020126 isoform X1 [Momordica charantia] >XP_022152381.1 uncharacterized protein LOC111020126 isoform X1 [Momordica charantia] >XP_022152382.1 uncharacterized protein LOC111020126 isoform X1 [Momordica charantia] >XP_022152383.1 uncharacterized protein LOC111020126 isoform X1 [Momordica charantia] >XP_022152384.1 uncharacterized protein LOC111020126 isoform X1 [Momordica charantia] >XP_022152385.1 uncharacterized protein LOC111020126 isoform X1 [Momordica charantia])

HSP 1 Score: 253.8 bits (647), Expect = 7.9e-64
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MQSHGTEFTGKRMKLDMEEQEKDTGMSNIIENEQCETSIRGSEEMESNITRLLEKIESFT 60
           MQSHGTEFTGKRMKLDMEEQEKDTGMSNIIENEQCETSIRGSEEMESNITRLLEKIESFT
Sbjct: 1   MQSHGTEFTGKRMKLDMEEQEKDTGMSNIIENEQCETSIRGSEEMESNITRLLEKIESFT 60

Query: 61  QLVSELLESGKTVFKDLSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEANTILCNA 120
           QLVSELLESGKTVFKDLSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEANTILCNA
Sbjct: 61  QLVSELLESGKTVFKDLSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEANTILCNA 120

Query: 121 RNLLQNGHTEF 132
           RNLLQNGHTEF
Sbjct: 121 RNLLQNGHTEF 131

[Close]

BLAST of Moc05g13710 vs. NCBI nr
Match: XP_038903068.1 (uncharacterized protein LOC120089754 isoform X2 [Benincasa hispida])

HSP 1 Score: 226.1 bits (575), Expect = 1.8e-55
Identity = 117/131 (89.31%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MQSHGTEFTGKRMKLDMEEQEKDTGMSNIIENEQCETSIRGSEEMESNITRLLEKIESFT 60
           M+S+GTEFTGKRMKL MEEQ KDTGMSN++ENEQ +TSIRGSEEMESNI  LLEKIESFT
Sbjct: 1   MESNGTEFTGKRMKLAMEEQGKDTGMSNVLENEQSDTSIRGSEEMESNIACLLEKIESFT 60

Query: 61  QLVSELLESGKTVFKDLSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEANTILCNA 120
           QLVSELLESGKT FKDLSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEA+TILCNA
Sbjct: 61  QLVSELLESGKTTFKDLSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEASTILCNA 120

Query: 121 RNLLQNGHTEF 132
           RNLLQNGH +F
Sbjct: 121 RNLLQNGHIQF 131

[Close]

BLAST of Moc05g13710 vs. NCBI nr
Match: XP_022152386.1 (uncharacterized protein LOC111020126 isoform X2 [Momordica charantia])

HSP 1 Score: 221.9 bits (564), Expect = 3.3e-54
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 17  MEEQEKDTGMSNIIENEQCETSIRGSEEMESNITRLLEKIESFTQLVSELLESGKTVFKD 76
           MEEQEKDTGMSNIIENEQCETSIRGSEEMESNITRLLEKIESFTQLVSELLESGKTVFKD
Sbjct: 1   MEEQEKDTGMSNIIENEQCETSIRGSEEMESNITRLLEKIESFTQLVSELLESGKTVFKD 60

Query: 77  LSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEANTILCNARNLLQNGHTEF 132
           LSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEANTILCNARNLLQNGHTEF
Sbjct: 61  LSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEANTILCNARNLLQNGHTEF 115

[Close]

BLAST of Moc05g13710 vs. NCBI nr
Match: XP_023540392.1 (uncharacterized protein LOC111800780 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023540393.1 uncharacterized protein LOC111800780 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 219.9 bits (559), Expect = 1.3e-53
Identity = 113/131 (86.26%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MQSHGTEFTGKRMKLDMEEQEKDTGMSNIIENEQCETSIRGSEEMESNITRLLEKIESFT 60
           M+S+GTEFTGKRMKL MEEQ KDT +SNI ENEQCET IRGSEEMESNI RLLEKIESFT
Sbjct: 1   MESNGTEFTGKRMKLAMEEQGKDTSISNISENEQCETDIRGSEEMESNIARLLEKIESFT 60

Query: 61  QLVSELLESGKTVFKDLSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEANTILCNA 120
           QLVSELLESGKT FKDLSNEFEE+IIAIHK++VE+WQHEIKELRLLDSSNEEA+T+LCNA
Sbjct: 61  QLVSELLESGKTAFKDLSNEFEEQIIAIHKNNVERWQHEIKELRLLDSSNEEASTVLCNA 120

Query: 121 RNLLQNGHTEF 132
           RNLLQNGH +F
Sbjct: 121 RNLLQNGHIQF 131

[Close]

BLAST of Moc05g13710 vs. NCBI nr
Match: XP_022972170.1 (uncharacterized protein LOC111470787 isoform X1 [Cucurbita maxima] >XP_022972172.1 uncharacterized protein LOC111470787 isoform X1 [Cucurbita maxima] >XP_022972173.1 uncharacterized protein LOC111470787 isoform X1 [Cucurbita maxima])

HSP 1 Score: 219.2 bits (557), Expect = 2.2e-53
Identity = 114/131 (87.02%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MQSHGTEFTGKRMKLDMEEQEKDTGMSNIIENEQCETSIRGSEEMESNITRLLEKIESFT 60
           M+S+GTEFTGKRMKL M EQ KDT MSNI ENEQCET IRGSEEMESNI RLLEKIESFT
Sbjct: 1   MESNGTEFTGKRMKLAMGEQGKDTSMSNISENEQCETDIRGSEEMESNIARLLEKIESFT 60

Query: 61  QLVSELLESGKTVFKDLSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEANTILCNA 120
           QLVSELLESGKT FKDLSNEFEE+IIAIHK++VE+WQHEIKELRLLDSSNEEA+TILCNA
Sbjct: 61  QLVSELLESGKTAFKDLSNEFEEQIIAIHKNNVERWQHEIKELRLLDSSNEEASTILCNA 120

Query: 121 RNLLQNGHTEF 132
           RNLLQNGH +F
Sbjct: 121 RNLLQNGHIQF 131

[Close]

BLAST of Moc05g13710 vs. ExPASy TrEMBL
Match: A0A6J1DG17 (uncharacterized protein LOC111020126 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020126 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 3.8e-64
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MQSHGTEFTGKRMKLDMEEQEKDTGMSNIIENEQCETSIRGSEEMESNITRLLEKIESFT 60
           MQSHGTEFTGKRMKLDMEEQEKDTGMSNIIENEQCETSIRGSEEMESNITRLLEKIESFT
Sbjct: 1   MQSHGTEFTGKRMKLDMEEQEKDTGMSNIIENEQCETSIRGSEEMESNITRLLEKIESFT 60

Query: 61  QLVSELLESGKTVFKDLSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEANTILCNA 120
           QLVSELLESGKTVFKDLSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEANTILCNA
Sbjct: 61  QLVSELLESGKTVFKDLSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEANTILCNA 120

Query: 121 RNLLQNGHTEF 132
           RNLLQNGHTEF
Sbjct: 121 RNLLQNGHTEF 131

[Close]

BLAST of Moc05g13710 vs. ExPASy TrEMBL
Match: A0A6J1DHK0 (uncharacterized protein LOC111020126 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111020126 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.6e-54
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 17  MEEQEKDTGMSNIIENEQCETSIRGSEEMESNITRLLEKIESFTQLVSELLESGKTVFKD 76
           MEEQEKDTGMSNIIENEQCETSIRGSEEMESNITRLLEKIESFTQLVSELLESGKTVFKD
Sbjct: 1   MEEQEKDTGMSNIIENEQCETSIRGSEEMESNITRLLEKIESFTQLVSELLESGKTVFKD 60

Query: 77  LSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEANTILCNARNLLQNGHTEF 132
           LSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEANTILCNARNLLQNGHTEF
Sbjct: 61  LSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEANTILCNARNLLQNGHTEF 115

[Close]

BLAST of Moc05g13710 vs. ExPASy TrEMBL
Match: A0A6J1I7S6 (uncharacterized protein LOC111470787 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470787 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.0e-53
Identity = 114/131 (87.02%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MQSHGTEFTGKRMKLDMEEQEKDTGMSNIIENEQCETSIRGSEEMESNITRLLEKIESFT 60
           M+S+GTEFTGKRMKL M EQ KDT MSNI ENEQCET IRGSEEMESNI RLLEKIESFT
Sbjct: 1   MESNGTEFTGKRMKLAMGEQGKDTSMSNISENEQCETDIRGSEEMESNIARLLEKIESFT 60

Query: 61  QLVSELLESGKTVFKDLSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEANTILCNA 120
           QLVSELLESGKT FKDLSNEFEE+IIAIHK++VE+WQHEIKELRLLDSSNEEA+TILCNA
Sbjct: 61  QLVSELLESGKTAFKDLSNEFEEQIIAIHKNNVERWQHEIKELRLLDSSNEEASTILCNA 120

Query: 121 RNLLQNGHTEF 132
           RNLLQNGH +F
Sbjct: 121 RNLLQNGHIQF 131

[Close]

BLAST of Moc05g13710 vs. ExPASy TrEMBL
Match: A0A6J1EXU6 (uncharacterized protein LOC111439190 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439190 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.8e-53
Identity = 113/131 (86.26%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MQSHGTEFTGKRMKLDMEEQEKDTGMSNIIENEQCETSIRGSEEMESNITRLLEKIESFT 60
           M+S+G +FTGKRMKL MEEQ KDT MSNI ENEQCET IRGSEEMESNI RLLEKIESFT
Sbjct: 1   MESNGIDFTGKRMKLAMEEQGKDTSMSNISENEQCETDIRGSEEMESNIARLLEKIESFT 60

Query: 61  QLVSELLESGKTVFKDLSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEANTILCNA 120
           QLVSELLESGKT FKDLSNEFEE+IIAIHK++VE+WQHEIKELRLLDSSNEEA+TILCNA
Sbjct: 61  QLVSELLESGKTAFKDLSNEFEEQIIAIHKNNVERWQHEIKELRLLDSSNEEASTILCNA 120

Query: 121 RNLLQNGHTEF 132
           RNLLQNGH +F
Sbjct: 121 RNLLQNGHIQF 131

[Close]

BLAST of Moc05g13710 vs. ExPASy TrEMBL
Match: A0A5D3E1L2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold734G00270 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.4e-52
Identity = 109/131 (83.21%), Postives = 120/131 (91.60%), Query Frame = 0


Query: 1   MQSHGTEFTGKRMKLDMEEQEKDTGMSNIIENEQCETSIRGSEEMESNITRLLEKIESFT 60
           M+S+GTEFTGKR KL +EEQ +DT MSN++ENEQCET I+GSEEMESNI  LLEKIESFT
Sbjct: 14  MESNGTEFTGKRQKLAVEEQGRDTDMSNVLENEQCETIIKGSEEMESNIACLLEKIESFT 73

Query: 61  QLVSELLESGKTVFKDLSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEANTILCNA 120
           QLVSELLESGKT FK+L NEFEERIIAIHKDHVEKWQHEIKELRL+DSSNEE +TILCNA
Sbjct: 74  QLVSELLESGKTAFKELINEFEERIIAIHKDHVEKWQHEIKELRLIDSSNEEVSTILCNA 133

Query: 121 RNLLQNGHTEF 132
           RNLLQNGH +F
Sbjct: 134 RNLLQNGHIQF 144

[Close]

BLAST of Moc05g13710 vs. TAIR 10
Match: AT5G03050.1 (unknown protein; Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-31
Identity = 73/124 (58.87%), Postives = 94/124 (75.81%), Query Frame = 0


Query: 11  KRMKLDMEEQEKDT----GMSNIIENEQCETSIRGSEEMESNITRLLEKIESFTQLVSEL 70
           KRM+   EE + D+     + + IENE+ ET +  S+EME +I ++L+KIESFTQ VS L
Sbjct: 16  KRMRASDEEGKGDSRDGISLDHTIENEEAETKLVASDEMELSIAQILDKIESFTQTVSNL 75

Query: 71  LESGKTVFKDLSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEANTILCNARNLLQN 130
           LE+GKT+ K+LSNEFEER+I IHK+HVEKWQ EIKELRLLD+SNEE  ++L NAR L+QN
Sbjct: 76  LETGKTMLKELSNEFEERLIMIHKEHVEKWQDEIKELRLLDASNEETTSLLHNARYLIQN 135

The following BLAST results are available for this feature:

BLAST of Moc05g13710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152377.1	7.9e-64	100.00	uncharacterized protein LOC111020126 isoform X1 [Momordica charantia] >XP_022152...	[more]
XP_038903068.1	1.8e-55	89.31	uncharacterized protein LOC120089754 isoform X2 [Benincasa hispida]	[more]
XP_022152386.1	3.3e-54	100.00	uncharacterized protein LOC111020126 isoform X2 [Momordica charantia]	[more]
XP_023540392.1	1.3e-53	86.26	uncharacterized protein LOC111800780 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022972170.1	2.2e-53	87.02	uncharacterized protein LOC111470787 isoform X1 [Cucurbita maxima] >XP_022972172...	[more]

BLAST of Moc05g13710 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g13710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DG17	3.8e-64	100.00	uncharacterized protein LOC111020126 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DHK0	1.6e-54	100.00	uncharacterized protein LOC111020126 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1I7S6	1.0e-53	87.02	uncharacterized protein LOC111470787 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EXU6	1.8e-53	86.26	uncharacterized protein LOC111439190 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5D3E1L2	3.4e-52	83.21	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Moc05g13710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03050.1	1.5e-31	58.87	unknown protein; Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 42..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..43
None	No IPR available	PANTHER	PTHR35500	OS03G0108700 PROTEIN	coord: 1..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g13710.1	Moc05g13710.1	mRNA