Moc05g13440 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g13440
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
Location	chr5: 10296695 .. 10302113 (-)
RNA-Seq Expression	Moc05g13440
Synteny	Moc05g13440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATGGAGAGGACACCTATCCAAGAATTTGAAGGAGCTTCGGATCTTGCTCTGCCAGACCTCTCCTTCAAGCGCCCCCGCTAGGTATTCATTTTCTGTTGACGATCCCTTCTCTCTGCTCTGTCATTCAAAACTACAATTCCTGCTCCATCCCGGAGCTTATTTCGTAGATTTTTGTTTAATGGGGTTTCGTCTTTGACAGGGCATTTGTTGAAAAGAATTACAAGGACCTCAAGAGTTTGAATCCCAAATTTCCTATATTGATCCGCGAATGCAGTGGAGTCGAGCCGCAATTATGGGCTAGATATGGTACTTTAATGCCCCCTCCCCCCAAATCATTTCATTTCGTTTTAGTTCCTTCCCTCAAGGTTTCGAGATTCTTTCGGGCTTTGCTTAATTGATTCATAAGGGTGATTGGTAATATCAAATAATCTGCGTGGTAGTTCTTCTTTGACATTATATCATTACTTTCGTCGATATTAGGCGAGGGAAAATACTTTTGTCATGGTAGACAGTCAGGTTGGTCTCTTGAAGGCTCCATTTCACGAAATCTGCAAATGTCCATCTACCCGAATCCGTTGTGTGAGATTTGTAATTTGACTGGTCCTGTGGTTTCTTATCAAAAACTAAAATGGACCTGTCCTCACATAGAATCTGCCCCTTCACTTCTCTACTTCTGTTGACGAGTGTTAGAATTCAGATATCAAGAAACCAATTATTTATTTGCAATGGCTTGAACGAATCCAACGAAGAATCCCTCTGCCCCTTCACTGCCATCTTCATTTTACCTTCTAAATCAAGGAGAAATTAGTAGCCATTGGAGTTTCACCGTGACCCATTTTTTAACTTTTGTTTATAGCCAGTGGCTGAATTTCAAGAGGAACACTAATATTGTTTAGCCTCTTACAAATGCAAGGATGCATTTGCTTAATGATTTTTTTTATTTATTTTCTTTTTAGTTTAACTTATGATTTTCAAAAGTTTTAATTGTATATGCGTTAATTGGTAACCTTGTATTGCATAACACATTTTCATATTAATGCATATTTTTTATTTAGTTCTTCACGTCAATGTTATCTATACTTATCAATACATGTGATAAGGAATCATGAAATTATTAAGATTCAAAATTAGACTGCTGCTTGTGTAGGCTGTAGTGTATTTATACTCAACAAAATTTATCAATGATGAATAGTGAATATAATGATTTTTTTGTGCCAATGGTGAATTGACCATAAATCTTATTTTAAAATATCATTATAATTCCTTATTCAAATTGATATTGTCCATTCCTATATTTGATTGATGGGAAAATAAGGTATAGAAGTTGTTATATTGACTGAGACTAATTATGGGAAAATTTTCTCTGTACTTCGATTGAGATCATTAATTGAAACGTAGCGTTTACATTCCAATTGTTTGTTACAATGAAAATCATTGTCTGCTACTCTGCTTTTGTTGAGGAACCAGAATCACATTGTTTCATGATAATGATATAAGTTTTTTTTTTTTTTATGAGAAATACATATTTCATTGATGGTATGAAATATACAAAATGAAGGAAAGGAGTTACAAAAGAGCCCTCCAATTCCTCAAAAGGTCATTTAGACTATAGCTAGAGAAAGATGGAAAGTAGCTTTTACACTAGCTAAGAGCTGTAACCAAAACCCCATTATAAAAGTTGTCAAACGGCTGGGACTTGTTGTTGAAGATTCTGCTATTCCTTTCTCTCCATAGATTCCATAGAAATGCTCTGATAAAGAGGGACCACATAATCTTCTTGTTCTTTTTGAAAGGATGTCCCCCCAAGGTTGCTTGTAACAGGGTGTTTATATTCGCATGTAGAAGGATTTGCCAATCAAAAGCTTCAATAATGGAGCTCCAAAAGCTGTGTGCAAATTTGCAAGTGACAAAGAGATGGTTTTGGATTTCTGCTTCCTTGAGACACATTATGCACCCATTTGGAGATAAAGCCATCATTGGAAGACACCTCTCTAATCTATCTTGGGTGTTGATAGGTTTGTGACTAAGCTCCCAACAAAAGAATTTTACTTTTTTGGGTACCTTCCTGCCCAAATAATGTCAAAAGACGAGGGGGGAGGAGTGTGTTGCACAGCTGTGAGGTGCTTTAGGAGGGATTTAACTGTATAGATTTGAGTATAGGCCAAATCCATTTGTCTTCCCTGTGAGAGAGATGAATAGCTGAGATTCTGTGCTCAAGGTCAATCCATTCTGTCAGTTCCTCATCTTTGAGCGGTCTACGGAAATGGTGATTCCATGCAGCTGTGGATTGTTCCCACATCTCACTAACCTTGGCGTCTTTCTTTGTAGAGAGCAAGTGGAGTTGGGGGAAATCCTCAACCAAAGGGTTATTTGAAGTCCGTCTGTTGTTCCAGAAACTAGCCAATCTACCATTGCCAATTTTACAGTGCACCCTGTTTTTCATATTGTTAATGAACTTAGATATGCTGGCCCAAGGACCTTTGTAGATTTTGGATGGTTGATTTGGCTAAGGCTGATTTGGAGAAATCCCATATTTCGCCCCAATCAATTGTGTCTAGAGGCTGGCCTTTTCTGTTAAAAATCTCCAGACCCACTTTGATAACAGAGCTTGGTTTCGATTCAATATGTTGCCAATCCCCAAGCCTCCTTGATCAGTAGGGAGCTGTACTTTTCTCCAGTTAACCAGGATAATGATATAAGTTTTTCATTTATAATCTCAGGTTTTTTTACTGCTAGGTTTGCTCACTGTCTCCATTAAATTCCTTTGAGTATTTCACTTTCATTCCCTGCCCTCATTATTTCAAATGATTAATTTATTTGACTTAACGTTTCTAAAAATTTGAATGATTTTGAACCATCAACTGAAGTTGATCTTGTAGTAGTAATTAGTAAATAAAGTTGCGCTACTGTCCTCTAGGATTGAGTTTATTCAGTGAGAGTTAGTGTATAATAACTTCTTGTTTTTGTTTCAACTGTTGTTAGTCAATTGGCTTGTAAATTAGTTAGTTTTAACTTTTATTTGGTAGTTTAGTCGACTAAGTGGCAAGTGCTGTAGTAAATACTACCTTCATCATATTGAATAAGGATTTCTCAAGCATTTTTTGAGACGTTGCCTGAGTTGACCATTGCCACCCATAGAGTTTGAGAAAACTTGTTAATGGAGATTATAGGAAGGACCTTGTTGATGTTGTACTTGGTAGCAAAAAGTGCAGGCAACTTCATGAGGCTGCTAGAAAGGTTAACTGCTGTACAAAAAGAGATTGAAGACATTCATCAATCTGTAATTACAATCCATAAAAGTTTGAAGAGATTCTCTCAACGTATGGAATGTATCCAATAGCGAGACCATAATCTTCACTATGAAATTATCATTAGCCATTATCTTTTTTCTGACATGGTGGACTTGAAAGGATTCATGTCTTATGTTATTTGCAAGAAATGAATAGCATGGGCTCAAGAATGAGAGTTTAAAGGTTATGAAACTTGTATATCATACTTTGCCAAAAAATAAAAAGTAAAAATTGTGTGTCACTCCATGTGTGATCATTGATCAATATTCTACTTGTTGGAATTTAGGTTTGTTTTTCTCACCTTCCACATTAAAAAAGCCTAGTGTTCTTTCTTCTCTCACCAAGAACCACAAGTATTATCAAAGGATCAAGAGCTACCATTCCTTTTTTTTTTTTTTTTGATAATAAACAATGAGAATTCATTCTTCAAGACGTGGAGCCCAAAAAAAAGGCATACAACCTAGAGGCAGAGGGTCGAGGAGACCCCCTCCAAAGAACCTATACAATCAAAGTATTCCAACTCTGGAGAGTCAAAAGAAAACCGTAGTTACAAAAAACCTTCTTGTGGATCGAAGCCCACCAAGAAGAAGAGGGAAGGATGATGTTAATGTTCGTCTTGAAAGTTGACTCACTTCAAGTATCACAAACAACCTTGACACTGAGTTGAAGTTCATTTGCCACAGTTTTTGTAACCCTATTGAATTTGATTTTATAGATTTTGTAACCCTTTGATAGTGATACCCAAATTCCCCCCCTCCCACATAGTTGAGTTTTTGATGCGTTCCAAAGGTGGTGTTTAGGATTCAATGCCAATTCATGAGTTCTCAAACACCAATAATCATTCTTTGAGAGCTTTGAGATCTCAAGAAATTGTGATTAATGGAAAAAAAAAATGCAGGCTAGACCAGTTAAAGAATGCATGAAGTATGGGCTTCGAAGGAGTTGTGAACAAAACTCTAAAAAACCTGACATACTTTGTCAAACATTTGTTAACAATTTGTTTACAATTATTTTAGTGAGGAAAATGATTTTCAGGAGGAATAGATAGATGATGAAGGAAAAGTTCGTCTGAACTTGGATATCTGTAGATATGCTAAAAGCCTAAAGCTAATAGATAAAAAAATACCAATACTGAAAAGCCATGGGGCAGCAAAGATAAAAGTAAAACTGAAGACCCATGGGGTAGGAGGAATTGATAGATAACAGAAAAGGTTCCTGTGAACTTGGGGGAAATGTAGATGCTGGGATTTTACCTTCTGATTTTATAGCGAGTGTTAATGTTTCCTATCAGTAGCTCCCGAATAAAAATATTAACCTTCCTTTGTTATCTACGTTCCATGTGCATTTGCATTAGTTTTGATCCTTTGTGATGTCGTTCAGAAGAGACTTGCAGCCAAAGGAGCTAAGGAGTCATAATGCCACAACCACTTGTCTTCCACAGGCCTAAGCATGAATTTGACAAGGATGTCATACGAGGAGATCATTCTTGAACTTCCAAATCGTTTAGGTTTCTAACAAATTTAGGTCCCAGAAGGTTTGGTGGCGTTCCAAACTTTACCAATAGTAAAGCGTTTGAAACAACATTATTTCAATGGAAAAGGGCAGAGAGATCTATAGCTTGCAATAATGTAAATTGAAATTACCTTGATGCCATTTTGAGAACGAAACCTTTTGGTTTGAGATTGAGGTCATGGATTGACGCTTCCAACGAACAATCACGGAGATGATTCTCTGAAAAGTGGAAGTGCAGGACATTCTTTCTTTGCTCTTTTAACCATCTGGTCTGGCCCAGTGATCACAGGACAATTGGCAGAACAATAATAGATGTTTCTTATGAATGTTAAAATCGCACAAGTTCTTGACGTTAAATGTTATTAGATTAGATTCTTTTTTTCTTTTCTTTTTTCTTTTTGGAAAATTAATCATGTGCTGAAATTTTGAGGATATGTGACCACAACATGCGCTTTATACATTCGTTCTTGGTTAATGCAGCTGATTGTTTTTCTTCATTTTTCTTTGATAAAAACAGACATGGGTGTTGAGAGGGTTGCTCGTCTGGAGGGTTTGAGCGAGGCACAGATCTCAAAGGCACTCGAAGATCTAGTTAAAGTTGGGGCATCCTGA

mRNA sequence

ATGGCATGGAGAGGACACCTATCCAAGAATTTGAAGGAGCTTCGGATCTTGCTCTGCCAGACCTCTCCTTCAAGCGCCCCCGCTAGGGCATTTGTTGAAAAGAATTACAAGGACCTCAAGAGTTTGAATCCCAAATTTCCTATATTGATCCGCGAATGCAGTGGAGTCGAGCCGCAATTATGGGCTAGATATGGTACTTTAATGCCCCCTCCCCCCAAATCATTTCATTTCGTTTTAGTTCCTTCCCTCAAGAGTTTGAGAAAACTTGTTAATGGAGATTATAGGAAGGACCTTGTTGATGTTGTACTTGGTAGCAAAAAGTGCAGGCAACTTCATGAGGCTGCTAGAAAGCTGATTGTTTTTCTTCATTTTTCTTTGATAAAAACAGACATGGGTGTTGAGAGGGTTGCTCGTCTGGAGGGTTTGAGCGAGGCACAGATCTCAAAGGCACTCGAAGATCTAGTTAAAGTTGGGGCATCCTGA

Coding sequence (CDS)

ATGGCATGGAGAGGACACCTATCCAAGAATTTGAAGGAGCTTCGGATCTTGCTCTGCCAGACCTCTCCTTCAAGCGCCCCCGCTAGGGCATTTGTTGAAAAGAATTACAAGGACCTCAAGAGTTTGAATCCCAAATTTCCTATATTGATCCGCGAATGCAGTGGAGTCGAGCCGCAATTATGGGCTAGATATGGTACTTTAATGCCCCCTCCCCCCAAATCATTTCATTTCGTTTTAGTTCCTTCCCTCAAGAGTTTGAGAAAACTTGTTAATGGAGATTATAGGAAGGACCTTGTTGATGTTGTACTTGGTAGCAAAAAGTGCAGGCAACTTCATGAGGCTGCTAGAAAGCTGATTGTTTTTCTTCATTTTTCTTTGATAAAAACAGACATGGGTGTTGAGAGGGTTGCTCGTCTGGAGGGTTTGAGCGAGGCACAGATCTCAAAGGCACTCGAAGATCTAGTTAAAGTTGGGGCATCCTGA

Protein sequence

MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQLWARYGTLMPPPPKSFHFVLVPSLKSLRKLVNGDYRKDLVDVVLGSKKCRQLHEAARKLIVFLHFSLIKTDMGVERVARLEGLSEAQISKALEDLVKVGAS

Homology

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BLAST of Moc05g13440 vs. NCBI nr
Match: XP_022152373.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Momordica charantia])

HSP 1 Score: 163.7 bits (413), Expect = 1.3e-36
Identity = 95/160 (59.38%), Postives = 95/160 (59.38%), Query Frame = 0


Query: 1   MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQL 60
           MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQL
Sbjct: 1   MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQL 60

Query: 61  WARYGTLMPPPPKSFHFVLVPSLKSLRKLVNGDYRKDLVDVVLGSKKCRQLHEAARKLIV 120
           WARY                                                        
Sbjct: 61  WARY-------------------------------------------------------- 95

Query: 121 FLHFSLIKTDMGVERVARLEGLSEAQISKALEDLVKVGAS 161
                    DMGVERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 121 ---------DMGVERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Moc05g13440 vs. NCBI nr
Match: XP_022935669.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita moschata] >KAG6581644.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018138.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 157.5 bits (397), Expect = 9.4e-35
Identity = 91/160 (56.88%), Postives = 94/160 (58.75%), Query Frame = 0


Query: 1   MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQL 60
           MAWRG LSKNLKELRILLCQTSPSSAPARAFVEKNYK+LK+LNPKFPILIRECSGVEPQL
Sbjct: 1   MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQL 60

Query: 61  WARYGTLMPPPPKSFHFVLVPSLKSLRKLVNGDYRKDLVDVVLGSKKCRQLHEAARKLIV 120
           WARY                                                        
Sbjct: 61  WARY-------------------------------------------------------- 95

Query: 121 FLHFSLIKTDMGVERVARLEGLSEAQISKALEDLVKVGAS 161
                    DMG+ERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 121 ---------DMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Moc05g13440 vs. NCBI nr
Match: XP_008465169.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis melo] >KAA0037682.1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2 [Cucumis melo var. makuwa])

HSP 1 Score: 157.1 bits (396), Expect = 1.2e-34
Identity = 90/160 (56.25%), Postives = 94/160 (58.75%), Query Frame = 0


Query: 1   MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQL 60
           MAWRG LSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLK+LNPKFPILIRECSG+EPQL
Sbjct: 1   MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61  WARYGTLMPPPPKSFHFVLVPSLKSLRKLVNGDYRKDLVDVVLGSKKCRQLHEAARKLIV 120
           WARY                                                        
Sbjct: 61  WARY-------------------------------------------------------- 95

Query: 121 FLHFSLIKTDMGVERVARLEGLSEAQISKALEDLVKVGAS 161
                    DMG+ERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 121 ---------DMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Moc05g13440 vs. NCBI nr
Match: XP_004141152.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 1.6e-34
Identity = 90/160 (56.25%), Postives = 94/160 (58.75%), Query Frame = 0


Query: 1   MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQL 60
           MAWRG LSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLK+LNPKFPILIRECSG+EPQL
Sbjct: 1   MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61  WARYGTLMPPPPKSFHFVLVPSLKSLRKLVNGDYRKDLVDVVLGSKKCRQLHEAARKLIV 120
           WARY                                                        
Sbjct: 61  WARY-------------------------------------------------------- 95

Query: 121 FLHFSLIKTDMGVERVARLEGLSEAQISKALEDLVKVGAS 161
                    DMG+ERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 121 ---------DMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Moc05g13440 vs. NCBI nr
Match: XP_038906356.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida])

HSP 1 Score: 156.4 bits (394), Expect = 2.1e-34
Identity = 91/160 (56.88%), Postives = 93/160 (58.13%), Query Frame = 0


Query: 1   MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQL 60
           MAWRG LSKNLKELRILLCQ+SPSSAPAR FVEKNYKDLK+LNPKFPILIRECSGVEPQL
Sbjct: 1   MAWRGQLSKNLKELRILLCQSSPSSAPARGFVEKNYKDLKTLNPKFPILIRECSGVEPQL 60

Query: 61  WARYGTLMPPPPKSFHFVLVPSLKSLRKLVNGDYRKDLVDVVLGSKKCRQLHEAARKLIV 120
           WARY                                                        
Sbjct: 61  WARY-------------------------------------------------------- 95

Query: 121 FLHFSLIKTDMGVERVARLEGLSEAQISKALEDLVKVGAS 161
                    DMGVERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 121 ---------DMGVERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Moc05g13440 vs. ExPASy Swiss-Prot
Match: Q9FIJ2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At5g47890 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.6e-29
Identity = 74/160 (46.25%), Postives = 85/160 (53.12%), Query Frame = 0


Query: 1   MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQL 60
           MAWRG +SK++KELRILLCQ+SP+SAP R FVEKNYKDLKSLNPK PILIRECSGV+PQ+
Sbjct: 1   MAWRGSISKSMKELRILLCQSSPASAPTRTFVEKNYKDLKSLNPKLPILIRECSGVQPQM 60

Query: 61  WARYGTLMPPPPKSFHFVLVPSLKSLRKLVNGDYRKDLVDVVLGSKKCRQLHEAARKLIV 120
           WARY                                                        
Sbjct: 61  WARY-------------------------------------------------------- 95

Query: 121 FLHFSLIKTDMGVERVARLEGLSEAQISKALEDLVKVGAS 161
                    DMGVER   L+GL+E QI KALE+LVK GA+
Sbjct: 121 ---------DMGVERCVNLDGLTEPQILKALENLVKSGAT 95

[Close]

BLAST of Moc05g13440 vs. ExPASy Swiss-Prot
Match: Q02370 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Bos taurus OX=9913 GN=NDUFA2 PE=1 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-13
Identity = 37/61 (60.66%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 4  RGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQLWAR 63
          RG L   L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS V+P+LWAR
Sbjct: 11 RGKL--GLREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWAR 69

Query: 64 Y 65
          Y
Sbjct: 71 Y 69

[Close]

BLAST of Moc05g13440 vs. ExPASy Swiss-Prot
Match: O43678 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Homo sapiens OX=9606 GN=NDUFA2 PE=1 SV=3)

HSP 1 Score: 77.0 bits (188), Expect = 2.1e-13
Identity = 34/54 (62.96%), Postives = 40/54 (74.07%), Query Frame = 0


Query: 11 LKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQLWARY 65
          L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS V+P+LWARY
Sbjct: 16 LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARY 69

[Close]

BLAST of Moc05g13440 vs. ExPASy Swiss-Prot
Match: Q4R5E2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Macaca fascicularis OX=9541 GN=NDUFA2 PE=3 SV=3)

HSP 1 Score: 77.0 bits (188), Expect = 2.1e-13
Identity = 34/54 (62.96%), Postives = 40/54 (74.07%), Query Frame = 0


Query: 11 LKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQLWARY 65
          L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS V+P+LWARY
Sbjct: 16 LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARY 69

[Close]

BLAST of Moc05g13440 vs. ExPASy Swiss-Prot
Match: P0CB79 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo abelii OX=9601 GN=NDUFA2 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.1e-13
Identity = 34/54 (62.96%), Postives = 40/54 (74.07%), Query Frame = 0


Query: 11 LKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQLWARY 65
          L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS V+P+LWARY
Sbjct: 16 LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARY 69

[Close]

BLAST of Moc05g13440 vs. ExPASy TrEMBL
Match: A0A6J1DEP8 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Momordica charantia OX=3673 GN=LOC111020121 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 6.4e-37
Identity = 95/160 (59.38%), Postives = 95/160 (59.38%), Query Frame = 0


Query: 1   MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQL 60
           MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQL
Sbjct: 1   MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQL 60

Query: 61  WARYGTLMPPPPKSFHFVLVPSLKSLRKLVNGDYRKDLVDVVLGSKKCRQLHEAARKLIV 120
           WARY                                                        
Sbjct: 61  WARY-------------------------------------------------------- 95

Query: 121 FLHFSLIKTDMGVERVARLEGLSEAQISKALEDLVKVGAS 161
                    DMGVERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 121 ---------DMGVERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Moc05g13440 vs. ExPASy TrEMBL
Match: A0A6J1F628 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111442457 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 4.6e-35
Identity = 91/160 (56.88%), Postives = 94/160 (58.75%), Query Frame = 0


Query: 1   MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQL 60
           MAWRG LSKNLKELRILLCQTSPSSAPARAFVEKNYK+LK+LNPKFPILIRECSGVEPQL
Sbjct: 1   MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQL 60

Query: 61  WARYGTLMPPPPKSFHFVLVPSLKSLRKLVNGDYRKDLVDVVLGSKKCRQLHEAARKLIV 120
           WARY                                                        
Sbjct: 61  WARY-------------------------------------------------------- 95

Query: 121 FLHFSLIKTDMGVERVARLEGLSEAQISKALEDLVKVGAS 161
                    DMG+ERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 121 ---------DMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Moc05g13440 vs. ExPASy TrEMBL
Match: A0A5A7T2I6 (NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1593G00030 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 6.0e-35
Identity = 90/160 (56.25%), Postives = 94/160 (58.75%), Query Frame = 0


Query: 1   MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQL 60
           MAWRG LSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLK+LNPKFPILIRECSG+EPQL
Sbjct: 1   MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61  WARYGTLMPPPPKSFHFVLVPSLKSLRKLVNGDYRKDLVDVVLGSKKCRQLHEAARKLIV 120
           WARY                                                        
Sbjct: 61  WARY-------------------------------------------------------- 95

Query: 121 FLHFSLIKTDMGVERVARLEGLSEAQISKALEDLVKVGAS 161
                    DMG+ERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 121 ---------DMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Moc05g13440 vs. ExPASy TrEMBL
Match: A0A1S3CN67 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Cucumis melo OX=3656 GN=LOC103502835 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 6.0e-35
Identity = 90/160 (56.25%), Postives = 94/160 (58.75%), Query Frame = 0


Query: 1   MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQL 60
           MAWRG LSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLK+LNPKFPILIRECSG+EPQL
Sbjct: 1   MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61  WARYGTLMPPPPKSFHFVLVPSLKSLRKLVNGDYRKDLVDVVLGSKKCRQLHEAARKLIV 120
           WARY                                                        
Sbjct: 61  WARY-------------------------------------------------------- 95

Query: 121 FLHFSLIKTDMGVERVARLEGLSEAQISKALEDLVKVGAS 161
                    DMG+ERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 121 ---------DMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Moc05g13440 vs. ExPASy TrEMBL
Match: A0A0A0LDA2 (L51_S25_CI-B8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G845450 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 7.8e-35
Identity = 90/160 (56.25%), Postives = 94/160 (58.75%), Query Frame = 0


Query: 1   MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQL 60
           MAWRG LSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLK+LNPKFPILIRECSG+EPQL
Sbjct: 1   MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61  WARYGTLMPPPPKSFHFVLVPSLKSLRKLVNGDYRKDLVDVVLGSKKCRQLHEAARKLIV 120
           WARY                                                        
Sbjct: 61  WARY-------------------------------------------------------- 95

Query: 121 FLHFSLIKTDMGVERVARLEGLSEAQISKALEDLVKVGAS 161
                    DMG+ERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 121 ---------DMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Moc05g13440 vs. TAIR 10
Match: AT5G47890.1 (NADH-ubiquinone oxidoreductase B8 subunit, putative )

HSP 1 Score: 129.4 bits (324), Expect = 2.6e-30
Identity = 74/160 (46.25%), Postives = 85/160 (53.12%), Query Frame = 0


Query: 1   MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQL 60
           MAWRG +SK++KELRILLCQ+SP+SAP R FVEKNYKDLKSLNPK PILIRECSGV+PQ+
Sbjct: 1   MAWRGSISKSMKELRILLCQSSPASAPTRTFVEKNYKDLKSLNPKLPILIRECSGVQPQM 60

Query: 61  WARYGTLMPPPPKSFHFVLVPSLKSLRKLVNGDYRKDLVDVVLGSKKCRQLHEAARKLIV 120
           WARY                                                        
Sbjct: 61  WARY-------------------------------------------------------- 95

Query: 121 FLHFSLIKTDMGVERVARLEGLSEAQISKALEDLVKVGAS 161
                    DMGVER   L+GL+E QI KALE+LVK GA+
Sbjct: 121 ---------DMGVERCVNLDGLTEPQILKALENLVKSGAT 95

The following BLAST results are available for this feature:

BLAST of Moc05g13440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152373.1	1.3e-36	59.38	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Momordica charanti...	[more]
XP_022935669.1	9.4e-35	56.88	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita mos...	[more]
XP_008465169.1	1.2e-34	56.25	PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis...	[more]
XP_004141152.1	1.6e-34	56.25	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis sativus]	[more]
XP_038906356.1	2.1e-34	56.88	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida]	[more]

BLAST of Moc05g13440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIJ2	3.6e-29	46.25	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thal...	[more]
Q02370	1.2e-13	60.66	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Bos taurus OX=99...	[more]
O43678	2.1e-13	62.96	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Homo sapiens OX=...	[more]
Q4R5E2	2.1e-13	62.96	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Macaca fascicula...	[more]
P0CB79	2.1e-13	62.96	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo abelii OX=...	[more]

BLAST of Moc05g13440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DEP8	6.4e-37	59.38	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Momordica charan...	[more]
A0A6J1F628	4.6e-35	56.88	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita m...	[more]
A0A5A7T2I6	6.0e-35	56.25	NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 2 OS=Cucumis melo var...	[more]
A0A1S3CN67	6.0e-35	56.25	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Cucumis melo OX=...	[more]
A0A0A0LDA2	7.8e-35	56.25	L51_S25_CI-B8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G8454...	[more]

BLAST of Moc05g13440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47890.1	2.6e-30	46.25	NADH-ubiquinone oxidoreductase B8 subunit, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007741	Ribosomal protein/NADH dehydrogenase domain	SMART	SM00916	L51_S25_CI_B8_2	coord: 20..93 e-value: 1.1E-9 score: 48.2
IPR007741	Ribosomal protein/NADH dehydrogenase domain	PFAM	PF05047	L51_S25_CI-B8	coord: 28..65 e-value: 3.1E-11 score: 43.0
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 2..158 e-value: 2.5E-28 score: 100.2
None	No IPR available	PIRSR	PIRSR005822-1	PIRSR005822-1	coord: 1..64 e-value: 1.3E-28 score: 97.3
None	No IPR available	PANTHER	PTHR12878:SF5	BNAANNG07980D PROTEIN	coord: 1..65
None	No IPR available	PANTHER	PTHR12878:SF5	BNAANNG07980D PROTEIN	coord: 127..159
IPR016464	NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2	PANTHER	PTHR12878	NADH-UBIQUINONE OXIDOREDUCTASE B8 SUBUNIT	coord: 127..159
IPR016464	NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2	PANTHER	PTHR12878	NADH-UBIQUINONE OXIDOREDUCTASE B8 SUBUNIT	coord: 1..65
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 10..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g13440.1	Moc05g13440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
cellular_component	GO:0005739	mitochondrion