Moc05g04340 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g04340
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein CURVATURE THYLAKOID 1A, chloroplastic
Location	chr5: 2990405 .. 2993024 (-)
RNA-Seq Expression	Moc05g04340
Synteny	Moc05g04340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCCACGGCCTCCACCGCAGCGGCCACCGCCGCCCTGAGACCTTGCCTGGCTGCTCCCCAACCCACTCGCCGCCCCGCCATGCCGCTCCTCCCTCCTCGCCTCGCCTCCCCGTCTTTCCCCACTTCCCTCAATTTGTCTTTAGGTAAATTCTCTCGCAGAATCCCTTTATTTTTCTCTGGGCATTTCGTCGAACACCTTAGGGTCGGTCCCTTTTAACTTATGGCTTGCTTTGTTTCTCCGATAGCTGCGTCGTTGGGGTCTTAACTTGTTGAGTTTAGTTGTATGTGTATCATTCAAATCACCTTTATATTGGTTCTGAAGAAAATTTTCCGTCGAACTGAAGTTTAACTATCGAGATAAGGGTCTTTATAATACATTATCTTACAAGCTTGGTAGTCTATAGTCTATACATTCAACCATTCGGACCCGCAGAGGTTGAAGTTTCTTTAAAGATTTGGATTAGAAGACATTTCATTTTGTTCAAGTTCTGTAGTCTGTGACTTAATTTGGAGAGAGTTTCGTTAGTTACTTTAACAGTAGCATATAATATTCCATCATTAGTTTGGTGCCTGATGAAAATGGGCAATTTCTGTTCTTGTTATTGAGCCAGAAATTTATTTATTTTTATTGTCCATTCAATTATAGGAACTTAAATGATACTAGACCGGGTGCATTAAGGGTGTGTTTGAGAGTGATGGTAGCATTAGTGATTTTGAAAAAAGAAATTTAAGTATAATTGATTTTTCAAAATCATCTAGGTAGTACTTTAACCATTAATTTAAAGTGATTTTAAGCTTTACTAAAATCAAATTTTGATTTGCTAAACATGATCCATGAAAAGGGAAGTGACCAAAATCACTCCCAAACAGACACCTTGGTCACCATGCATTATGCACCCAGGTAATTGATAACAACCCATTTTAAAGTCCATTTAAAAATTCTGAAGAAGCTAACAGTCCACTTTAAAGTTTCAATACATGCTTATGCACCATCGGCTAGAACTCCATCCGCTTCCAATGGATGATTGTGTTGTGATATAGCATTGAGAAGGTATAAATATGCTGATTTTTCTGGAGAAACCTTGCGATCTGTGAATATAAAATAAGAGTGTTATGTGCAGATGCATATCTATATATATATACACGCACATATATATCCATTGAACGTCTTATTAGATTTGCGAGAGGGGATATATTCTATTTATGAGAATATTTCAGAGAATTCAAAGCCAATTTATTTATTGGCAGCCAGCCCCATTTCAATAAAAAGATGTTTGGAAATGAGGTCTGGAGTCCAACAAAATGGTTCCCTTGTCCCTTTGATAGTTCATGAATTTCGGTTTAGATAACTTCTCAGTTCTCACTGGGCACGTCAGTTTCTTGATTGAAACTCTTTATAAACTTTATTGGAATTTTCTAACCAACCATTTGGTGACAGAGTTTCGTAGATCTTCTCTGCTTCAAACCCGGGCCTCGTCTTCGGAAGAATCATCTGCTGCTGATGCGTCTGAGCTCTTTACAGACTTGAAAGAAAAGGTAACCACAGGAAGCATAATAATGCCCATTATTGTCATAGTTCTGAGAAAGCTGTTGAGTTTTTTTTCCTGAAAATTATTTTTTTCTGTTAATTATATTGATTCTGAGATGACTAAGAAATAATGTTATCCTACTGTTTATTAGTGGGATGCCCTTGAGAACAAATCCACAGTACTTCTCTATGGAGGCGGGGCGATAGTTGCTGTTTGGCTATCCTCAATTCTTGTTGGTGCAATCAACTCAGTGCCATTGGTATGTGATTCCTTCAGACTCATGCTTCTGTAATCTTATTGCTGTATGAATGGGTTTTTGATGCAATTATGGCTGAATTAGTTCAACAGGTGAGTTTTGGGGTGCCATTTGAAAAAATGGAAGCATTCCTTTTGAAAGCACGTCGAGTGATTTTTATGTGCTTTTAGAATTCCTCAAGCTATTTTTGGTTATAAAAATTTTCAAAAAGTGGTTTTGATCGGTTAAGAGCAATTTTATAATAAGCACTTGTAGTTCTCCATAAGTACTTTAAAAAACATGACAAATTCACGCTTCTCACAAACTGGAATCGTTGTTGCTAGTTAACAATTTCTCGTATTATCAATTTGATTCTTCCCCTAATAAAGCCGTTTTGACACTTTTCATCCATCTTATCAGCTGCCAAAGATCCTGGAGTTGGTAGGACTTGGATATACAGGGTGGTTTGTGTACCGATATCTACTCTTCAAGGTTAGTCGAAAACTAAGATTGGTTTCAAACAAGGTCTGAAACTTGTGATGCATACTCTGAGAAGTTAAAAGGATTAGACCCTCTTTTCTTTATGGATTATCTGTTTAGTTTCTTAGATTCATTCGGGATCCGAAAAATTCAAATTTTAGGTACATGTTTCTAACATTATGATCCGAAACATAATCAAATGAAAATGGTGAATAGAATCTCGAGTTCTAAAAACCAAATATATCATAATTACAGGATGGATCTGAAACAAGATATTAACTTGAAGAATGTTTTTTTGTATGCAGTCAAGCAGAAAGGAACTAGCTGATGACATTGAAGCATTGAAGAAGAAGATTGCTGGGACCGAATAA

mRNA sequence

ATGGCAGCCACGGCCTCCACCGCAGCGGCCACCGCCGCCCTGAGACCTTGCCTGGCTGCTCCCCAACCCACTCGCCGCCCCGCCATGCCGCTCCTCCCTCCTCGCCTCGCCTCCCCGTCTTTCCCCACTTCCCTCAATTTGTCTTTAGAGTTTCGTAGATCTTCTCTGCTTCAAACCCGGGCCTCGTCTTCGGAAGAATCATCTGCTGCTGATGCGTCTGAGCTCTTTACAGACTTGAAAGAAAAGTGGGATGCCCTTGAGAACAAATCCACAGTACTTCTCTATGGAGGCGGGGCGATAGTTGCTGTTTGGCTATCCTCAATTCTTGTTGGTGCAATCAACTCAGTGCCATTGCTGCCAAAGATCCTGGAGTTGGTAGGACTTGGATATACAGGGTGGTTTGTGTACCGATATCTACTCTTCAAGTCAAGCAGAAAGGAACTAGCTGATGACATTGAAGCATTGAAGAAGAAGATTGCTGGGACCGAATAA

Coding sequence (CDS)

ATGGCAGCCACGGCCTCCACCGCAGCGGCCACCGCCGCCCTGAGACCTTGCCTGGCTGCTCCCCAACCCACTCGCCGCCCCGCCATGCCGCTCCTCCCTCCTCGCCTCGCCTCCCCGTCTTTCCCCACTTCCCTCAATTTGTCTTTAGAGTTTCGTAGATCTTCTCTGCTTCAAACCCGGGCCTCGTCTTCGGAAGAATCATCTGCTGCTGATGCGTCTGAGCTCTTTACAGACTTGAAAGAAAAGTGGGATGCCCTTGAGAACAAATCCACAGTACTTCTCTATGGAGGCGGGGCGATAGTTGCTGTTTGGCTATCCTCAATTCTTGTTGGTGCAATCAACTCAGTGCCATTGCTGCCAAAGATCCTGGAGTTGGTAGGACTTGGATATACAGGGTGGTTTGTGTACCGATATCTACTCTTCAAGTCAAGCAGAAAGGAACTAGCTGATGACATTGAAGCATTGAAGAAGAAGATTGCTGGGACCGAATAA

Protein sequence

MAATASTAAATAALRPCLAAPQPTRRPAMPLLPPRLASPSFPTSLNLSLEFRRSSLLQTRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE

Homology

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BLAST of Moc05g04340 vs. NCBI nr
Match: XP_022147267.1 (protein CURVATURE THYLAKOID 1A, chloroplastic [Momordica charantia])

HSP 1 Score: 297.0 bits (759), Expect = 1.0e-76
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MAATASTAAATAALRPCLAAPQPTRRPAMPLLPPRLASPSFPTSLNLSLEFRRSSLLQTR 60
           MAATASTAAATAALRPCLAAPQPTRRPAMPLLPPRLASPSFPTSLNLSLEFRRSSLLQTR
Sbjct: 1   MAATASTAAATAALRPCLAAPQPTRRPAMPLLPPRLASPSFPTSLNLSLEFRRSSLLQTR 60

Query: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 163

[Close]

BLAST of Moc05g04340 vs. NCBI nr
Match: XP_023539167.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274.6 bits (701), Expect = 5.4e-70
Identity = 152/163 (93.25%), Postives = 154/163 (94.48%), Query Frame = 0


Query: 1   MAATASTAAATAALRPCLAAPQPTRRPAMPLLPPRLASPSFPTSLNLSLEFRRSSLLQTR 60
           MAATAS  AATA LRP LAAPQPTRR AMPLLPPRL SPSFPTSL +SLE RRSSLLQTR
Sbjct: 1   MAATASPTAATAVLRPSLAAPQPTRRSAMPLLPPRLGSPSFPTSLKISLESRRSSLLQTR 60

Query: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGA+NSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAG E
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 163

[Close]

BLAST of Moc05g04340 vs. NCBI nr
Match: XP_022933676.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita moschata] >KAG6597102.1 Protein CURVATURE THYLAKOID 1A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 272.3 bits (695), Expect = 2.7e-69
Identity = 151/163 (92.64%), Postives = 153/163 (93.87%), Query Frame = 0


Query: 1   MAATASTAAATAALRPCLAAPQPTRRPAMPLLPPRLASPSFPTSLNLSLEFRRSSLLQTR 60
           MAATAS  AA A LRP LAAPQPTRR AMPLLPPRL SPSFPTSL +SLE RRSSLLQTR
Sbjct: 1   MAATASPTAAIAVLRPSLAAPQPTRRSAMPLLPPRLGSPSFPTSLKISLESRRSSLLQTR 60

Query: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGA+NSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAG E
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 163

[Close]

BLAST of Moc05g04340 vs. NCBI nr
Match: XP_022974634.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 271.9 bits (694), Expect = 3.5e-69
Identity = 150/163 (92.02%), Postives = 153/163 (93.87%), Query Frame = 0


Query: 1   MAATASTAAATAALRPCLAAPQPTRRPAMPLLPPRLASPSFPTSLNLSLEFRRSSLLQTR 60
           MAATAS  AATA LRP LAAPQPTRR AMPLLPPR  SP+FPTSL +SLE RRSSLLQTR
Sbjct: 1   MAATASPTAATAVLRPSLAAPQPTRRSAMPLLPPRFGSPAFPTSLKISLESRRSSLLQTR 60

Query: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGA+NSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAG E
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 163

[Close]

BLAST of Moc05g04340 vs. NCBI nr
Match: XP_023529055.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 267.7 bits (683), Expect = 6.6e-68
Identity = 150/163 (92.02%), Postives = 151/163 (92.64%), Query Frame = 0


Query: 1   MAATASTAAATAALRPCLAAPQPTRRPAMPLLPPRLASPSFPTSLNLSLEFRRSSLLQTR 60
           MAATAS  AATA LRP L A QPTRR A+PLLPPRL SPSFPTSL  SLE RRSSLLQTR
Sbjct: 1   MAATASPTAATAVLRPSLTAFQPTRRSALPLLPPRLGSPSFPTSLKFSLESRRSSLLQTR 60

Query: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIE LKKKIAGTE
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEVLKKKIAGTE 163

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BLAST of Moc05g04340 vs. ExPASy Swiss-Prot
Match: O04616 (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1A PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.4e-44
Identity = 108/166 (65.06%), Postives = 131/166 (78.92%), Query Frame = 0


Query: 1   MAATASTAAATAALRPCLAAPQPTRRPAMPLLPPR---LASPSFPTSLNLSLEFRRSSLL 60
           MA + + +++ A + P + A   TR  A+P LPPR    +S + P  L      ++  LL
Sbjct: 1   MAISVAASSSMAVMVPRVPAVS-TRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELL 60

Query: 61  QTRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVP 120
           +TRA SSEE+S+ D +EL TDLKEKWD LENKSTVL+YGGGAIVAVWLSSI+VGAINSVP
Sbjct: 61  KTRA-SSEETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVP 120

Query: 121 LLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           LLPK++ELVGLGYTGWFVYRYLLFKSSRKELA+DIE+LKKKIAG+E
Sbjct: 121 LLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164

[Close]

BLAST of Moc05g04340 vs. ExPASy Swiss-Prot
Match: Q8LDD3 (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1D PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.6e-16
Identity = 47/110 (42.73%), Postives = 72/110 (65.45%), Query Frame = 0


Query: 58  QTRASSSEESSAAD----ASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAI 117
           + + S+SE   A D    A E   D+K   D      ++LLYG GAIVA++L+S +V ++
Sbjct: 85  EEKNSNSEAPQAEDEETQALEFLNDIKLDSD---KTYSILLYGSGAIVALYLTSAIVSSL 144

Query: 118 NSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
            ++PL PK++E+VGLGYT WF  RYLLFK +R+EL   +  +KK++ G++
Sbjct: 145 EAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLGSD 191

[Close]

BLAST of Moc05g04340 vs. ExPASy Swiss-Prot
Match: Q8LCA1 (Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1B PE=1 SV=2)

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-12
Identity = 34/101 (33.66%), Postives = 64/101 (63.37%), Query Frame = 0


Query: 62  SSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLPK 121
           +++ E+   +  E+    +E W+ +++K  +       +VA+W S+ ++ AI+ +PL+P 
Sbjct: 73  ATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPG 132

Query: 122 ILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGT 163
           +LELVG+GYTGWF Y+ L+FK  R+ L + +++  K I G+
Sbjct: 133 VLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGS 173

[Close]

BLAST of Moc05g04340 vs. ExPASy Swiss-Prot
Match: Q9M812 (Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1C PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.5e-10
Identity = 40/114 (35.09%), Postives = 67/114 (58.77%), Query Frame = 0


Query: 47  LSLEFRRSSLLQTRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLS 106
           LSL    SS+     +S E S ++   ++ + ++  WD  E++  ++  G   IVA+W S
Sbjct: 41  LSLTRNPSSISLMVKASGESSDSSTDLDVVSTIQNVWDKSEDRLGLIGLGFAGIVALWAS 100

Query: 107 SILVGAINSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIA 161
             L+ AI+ +P++    ELVG+ ++ WF YRYLLFK  R+EL+   + +KK +A
Sbjct: 101 LNLITAIDKLPVISSGFELVGILFSTWFTYRYLLFKPDRQELS---KIVKKSVA 151

[Close]

BLAST of Moc05g04340 vs. ExPASy Swiss-Prot
Match: Q119Z5 (Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=gltX PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.1e-08
Identity = 30/70 (42.86%), Postives = 50/70 (71.43%), Query Frame = 0


Query: 94  LYGGGAIVAVWLS--SILVGAINSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELADD 153
           L+G  A+V +  +  ++++ A++ +P+L  I EL+G+ Y  WFVYRYLL +S+R+EL D 
Sbjct: 809 LFGWLALVILTFTFMAVVIEALDGIPILSIIFELIGVIYLVWFVYRYLLKRSNRQELLDK 868

Query: 154 IEALKKKIAG 162
           IE +K++I G
Sbjct: 869 IENIKREIFG 878

[Close]

BLAST of Moc05g04340 vs. ExPASy TrEMBL
Match: A0A6J1D1X0 (protein CURVATURE THYLAKOID 1A, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111016262 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.9e-77
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MAATASTAAATAALRPCLAAPQPTRRPAMPLLPPRLASPSFPTSLNLSLEFRRSSLLQTR 60
           MAATASTAAATAALRPCLAAPQPTRRPAMPLLPPRLASPSFPTSLNLSLEFRRSSLLQTR
Sbjct: 1   MAATASTAAATAALRPCLAAPQPTRRPAMPLLPPRLASPSFPTSLNLSLEFRRSSLLQTR 60

Query: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 163

[Close]

BLAST of Moc05g04340 vs. ExPASy TrEMBL
Match: A0A6J1EZQ9 (protein CURVATURE THYLAKOID 1A, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111441016 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.3e-69
Identity = 151/163 (92.64%), Postives = 153/163 (93.87%), Query Frame = 0


Query: 1   MAATASTAAATAALRPCLAAPQPTRRPAMPLLPPRLASPSFPTSLNLSLEFRRSSLLQTR 60
           MAATAS  AA A LRP LAAPQPTRR AMPLLPPRL SPSFPTSL +SLE RRSSLLQTR
Sbjct: 1   MAATASPTAAIAVLRPSLAAPQPTRRSAMPLLPPRLGSPSFPTSLKISLESRRSSLLQTR 60

Query: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGA+NSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAG E
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 163

[Close]

BLAST of Moc05g04340 vs. ExPASy TrEMBL
Match: A0A6J1II67 (protein CURVATURE THYLAKOID 1A, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111473314 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.7e-69
Identity = 150/163 (92.02%), Postives = 153/163 (93.87%), Query Frame = 0


Query: 1   MAATASTAAATAALRPCLAAPQPTRRPAMPLLPPRLASPSFPTSLNLSLEFRRSSLLQTR 60
           MAATAS  AATA LRP LAAPQPTRR AMPLLPPR  SP+FPTSL +SLE RRSSLLQTR
Sbjct: 1   MAATASPTAATAVLRPSLAAPQPTRRSAMPLLPPRFGSPAFPTSLKISLESRRSSLLQTR 60

Query: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGA+NSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAG E
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 163

[Close]

BLAST of Moc05g04340 vs. ExPASy TrEMBL
Match: A0A6J1IYH5 (protein CURVATURE THYLAKOID 1A, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111479625 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 5.4e-68
Identity = 149/163 (91.41%), Postives = 151/163 (92.64%), Query Frame = 0


Query: 1   MAATASTAAATAALRPCLAAPQPTRRPAMPLLPPRLASPSFPTSLNLSLEFRRSSLLQTR 60
           MAATAS  AATA LRP L A QPTRR A+PLLPPR+ SPSFPTSL  SLE RRSSLLQTR
Sbjct: 1   MAATASPTAATAVLRPSLTAFQPTRRSALPLLPPRIGSPSFPTSLKFSLESRRSSLLQTR 60

Query: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIE LKKKIAGTE
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEVLKKKIAGTE 163

[Close]

BLAST of Moc05g04340 vs. ExPASy TrEMBL
Match: A0A6J1E9V5 (protein CURVATURE THYLAKOID 1A, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111432156 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.7e-67
Identity = 149/163 (91.41%), Postives = 150/163 (92.02%), Query Frame = 0


Query: 1   MAATASTAAATAALRPCLAAPQPTRRPAMPLLPPRLASPSFPTSLNLSLEFRRSSLLQTR 60
           MAATAS  AATA LRP L A QPTRR A+PLLPPRL SPSF TSL  SLE RRSSLLQTR
Sbjct: 1   MAATASPTAATAVLRPSLTAFQPTRRSALPLLPPRLGSPSFTTSLKFSLESRRSSLLQTR 60

Query: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIE LKKKIAGTE
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEVLKKKIAGTE 163

[Close]

BLAST of Moc05g04340 vs. TAIR 10
Match: AT4G01150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 180.6 bits (457), Expect = 9.9e-46
Identity = 108/166 (65.06%), Postives = 131/166 (78.92%), Query Frame = 0


Query: 1   MAATASTAAATAALRPCLAAPQPTRRPAMPLLPPR---LASPSFPTSLNLSLEFRRSSLL 60
           MA + + +++ A + P + A   TR  A+P LPPR    +S + P  L      ++  LL
Sbjct: 1   MAISVAASSSMAVMVPRVPAVS-TRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELL 60

Query: 61  QTRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVP 120
           +TRA SSEE+S+ D +EL TDLKEKWD LENKSTVL+YGGGAIVAVWLSSI+VGAINSVP
Sbjct: 61  KTRA-SSEETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVP 120

Query: 121 LLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           LLPK++ELVGLGYTGWFVYRYLLFKSSRKELA+DIE+LKKKIAG+E
Sbjct: 121 LLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164

[Close]

BLAST of Moc05g04340 vs. TAIR 10
Match: AT4G01150.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 98.2 bits (243), Expect = 6.4e-21
Identity = 68/122 (55.74%), Postives = 87/122 (71.31%), Query Frame = 0


Query: 1   MAATASTAAATAALRPCLAAPQPTRRPAMPLLPPR---LASPSFPTSLNLSLEFRRSSLL 60
           MA + + +++ A + P + A   TR  A+P LPPR    +S + P  L      ++  LL
Sbjct: 1   MAISVAASSSMAVMVPRVPAVS-TRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELL 60

Query: 61  QTRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVP 120
           +TRA SSEE+S+ D +EL TDLKEKWD LENKSTVL+YGGGAIVAVWLSSI+VGAINSVP
Sbjct: 61  KTRA-SSEETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVP 120

[Close]

BLAST of Moc05g04340 vs. TAIR 10
Match: AT4G38100.1 (unknown protein; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 86.3 bits (212), Expect = 2.5e-17
Identity = 47/110 (42.73%), Postives = 72/110 (65.45%), Query Frame = 0


Query: 58  QTRASSSEESSAAD----ASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAI 117
           + + S+SE   A D    A E   D+K   D      ++LLYG GAIVA++L+S +V ++
Sbjct: 85  EEKNSNSEAPQAEDEETQALEFLNDIKLDSD---KTYSILLYGSGAIVALYLTSAIVSSL 144

Query: 118 NSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
            ++PL PK++E+VGLGYT WF  RYLLFK +R+EL   +  +KK++ G++
Sbjct: 145 EAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLGSD 191

[Close]

BLAST of Moc05g04340 vs. TAIR 10
Match: AT2G46820.1 (photosystem I P subunit )

HSP 1 Score: 74.7 bits (182), Expect = 7.6e-14
Identity = 34/101 (33.66%), Postives = 64/101 (63.37%), Query Frame = 0


Query: 62  SSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLPK 121
           +++ E+   +  E+    +E W+ +++K  +       +VA+W S+ ++ AI+ +PL+P 
Sbjct: 73  ATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPG 132

Query: 122 ILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGT 163
           +LELVG+GYTGWF Y+ L+FK  R+ L + +++  K I G+
Sbjct: 133 VLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGS 173

[Close]

BLAST of Moc05g04340 vs. TAIR 10
Match: AT2G46820.2 (photosystem I P subunit )

HSP 1 Score: 74.7 bits (182), Expect = 7.6e-14
Identity = 34/101 (33.66%), Postives = 64/101 (63.37%), Query Frame = 0


Query: 62  SSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLPK 121
           +++ E+   +  E+    +E W+ +++K  +       +VA+W S+ ++ AI+ +PL+P 
Sbjct: 73  ATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPG 132

Query: 122 ILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGT 163
           +LELVG+GYTGWF Y+ L+FK  R+ L + +++  K I G+
Sbjct: 133 VLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGS 173

The following BLAST results are available for this feature:

BLAST of Moc05g04340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147267.1	1.0e-76	100.00	protein CURVATURE THYLAKOID 1A, chloroplastic [Momordica charantia]	[more]
XP_023539167.1	5.4e-70	93.25	protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022933676.1	2.7e-69	92.64	protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita moschata] >KAG6597...	[more]
XP_022974634.1	3.5e-69	92.02	protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita maxima]	[more]
XP_023529055.1	6.6e-68	92.02	protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Moc05g04340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04616	1.4e-44	65.06	Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q8LDD3	3.6e-16	42.73	Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q8LCA1	1.1e-12	33.66	Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9M812	6.5e-10	35.09	Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q119Z5	6.1e-08	42.86	Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=...	[more]

BLAST of Moc05g04340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D1X0	4.9e-77	100.00	protein CURVATURE THYLAKOID 1A, chloroplastic OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1EZQ9	1.3e-69	92.64	protein CURVATURE THYLAKOID 1A, chloroplastic-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1II67	1.7e-69	92.02	protein CURVATURE THYLAKOID 1A, chloroplastic-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1IYH5	5.4e-68	91.41	protein CURVATURE THYLAKOID 1A, chloroplastic-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1E9V5	2.7e-67	91.41	protein CURVATURE THYLAKOID 1A, chloroplastic-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of Moc05g04340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01150.1	9.9e-46	65.06	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G01150.2	6.4e-21	55.74	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G38100.1	2.5e-17	42.73	unknown protein; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 pl...	[more]
AT2G46820.1	7.6e-14	33.66	photosystem I P subunit	[more]
AT2G46820.2	7.6e-14	33.66	photosystem I P subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025564	Cyanobacterial aminoacyl-tRNA synthetase, CAAD domain	PFAM	PF14159	CAAD	coord: 78..161 e-value: 1.7E-30 score: 104.7
IPR033344	Protein CURVATURE THYLAKOID 1	PANTHER	PTHR33222	FAMILY NOT NAMED	coord: 2..163
None	No IPR available	PANTHER	PTHR33222:SF31	MEMBRANE PHOSPHOPROTEIN 14 KDA, CHLOROPLAST, PUTATIVE-RELATED	coord: 2..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g04340.1	Moc05g04340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090391	granum assembly
biological_process	GO:0097753	membrane bending
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009515	granal stacked thylakoid
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009579	thylakoid