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Moc05g00220 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGACCGCAGAAATCGCTTGCTCCTACGCTGCTATGATCCTCTACGACGATGGCATCTCGATTACAGTATGATTCTCTTCAATTCTGGCATCGTCCTTCAGTATTTCATTCCTTTCTTAGTTATTACTTTCTGGATCTCGTTTACCAGTTTCAAAGTAATTAGCGGGGATGTTACCATGTATTATTCAAAGTGGTTGGTGTGGATGTCAGGAAAGGAGTATTAATTTTTGTGTGACTGCCATTCTAAATTGATAAAATAAGAAACATGGAGTATCCAACTATCGTTCTCTTTTTTGTTACAAGTCTTGTTTTCTAGATCTTGTTCTTCTGCCATGATTCCTTTTCTAGCCTGTTTATATCATTGGTTCATATTTGCGATCATGGTTTTATTCTTAATTTTCTTAATAGCGATTGTTATCATGCGGTCGTATCTGTCTAGTTCACATAAATTGTATGGAAATAAGATTTCAAAATGTGTGTTTTCATCAGGCAGAGAAGATTGCCGCCCTTGTAAAAGCAGCTAATGTGAGTGGTGTGGATTCGTACTGGTATAGCCTTTTCGCTAAGCTGGCTGAGAAGCGCAACATTGGGGATTTGATTATGAATGTTGGGGCTGGTGGAGGTGCGGCAGTCGCTGCTGCTGTCCCAGCCGGTGGGGCTGCTGGCGGTGCTGCTGCTGCAGCCGCTCCTCCACCCGAAGAGAAAAAGGTAAGCGGATACCCATTTGGTTTCCAAGAAGGAAATTGTTGCATATGTTATCATGGATAAAGCTTGGTTTTGTGGTGGTAGTACATCATTGTGACATGGGATTGTTTTGTTATTTGCAGGAAGAGCCAAAGGAAGAGAGTGACGATGACATGGGATTCAGTTTGTTTGACTAG ATGTCGACCGCAGAAATCGCTTGCTCCTACGCTGCTATGATCCTCTACGACGATGGCATCTCGATTACAGCAGAGAAGATTGCCGCCCTTGTAAAAGCAGCTAATGTGAGTGGTGTGGATTCGTACTGGTATAGCCTTTTCGCTAAGCTGGCTGAGAAGCGCAACATTGGGGATTTGATTATGAATGTTGGGGCTGGTGGAGGTGCGGCAGTCGCTGCTGCTGTCCCAGCCGGTGGGGCTGCTGGCGGTGCTGCTGCTGCAGCCGCTCCTCCACCCGAAGAGAAAAAGGAAGAGCCAAAGGAAGAGAGTGACGATGACATGGGATTCAGTTTGTTTGACTAG ATGTCGACCGCAGAAATCGCTTGCTCCTACGCTGCTATGATCCTCTACGACGATGGCATCTCGATTACAGCAGAGAAGATTGCCGCCCTTGTAAAAGCAGCTAATGTGAGTGGTGTGGATTCGTACTGGTATAGCCTTTTCGCTAAGCTGGCTGAGAAGCGCAACATTGGGGATTTGATTATGAATGTTGGGGCTGGTGGAGGTGCGGCAGTCGCTGCTGCTGTCCCAGCCGGTGGGGCTGCTGGCGGTGCTGCTGCTGCAGCCGCTCCTCCACCCGAAGAGAAAAAGGAAGAGCCAAAGGAAGAGAGTGACGATGACATGGGATTCAGTTTGTTTGACTAG MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLIMNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD Homology
BLAST of Moc05g00220 vs. NCBI nr
Match: XP_022144008.1 (60S acidic ribosomal protein P1-like [Momordica charantia]) HSP 1 Score: 204.9 bits (520), Expect = 3.6e-49 Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0
BLAST of Moc05g00220 vs. NCBI nr
Match: XP_008437779.1 (PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo] >KAA0048820.1 60S acidic ribosomal protein P1-like [Cucumis melo var. makuwa] >TYK20773.1 60S acidic ribosomal protein P1-like [Cucumis melo var. makuwa]) HSP 1 Score: 187.2 bits (474), Expect = 7.8e-44 Identity = 103/113 (91.15%), Postives = 106/113 (93.81%), Query Frame = 0
BLAST of Moc05g00220 vs. NCBI nr
Match: XP_004133766.1 (60S acidic ribosomal protein P1 [Cucumis sativus] >KGN56349.1 hypothetical protein Csa_009966 [Cucumis sativus]) HSP 1 Score: 182.2 bits (461), Expect = 2.5e-42 Identity = 100/113 (88.50%), Postives = 104/113 (92.04%), Query Frame = 0
BLAST of Moc05g00220 vs. NCBI nr
Match: XP_038883955.1 (60S acidic ribosomal protein P1-like [Benincasa hispida]) HSP 1 Score: 181.4 bits (459), Expect = 4.3e-42 Identity = 99/113 (87.61%), Postives = 104/113 (92.04%), Query Frame = 0
BLAST of Moc05g00220 vs. NCBI nr
Match: KAG6597015.1 (60S acidic ribosomal protein P1-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 172.2 bits (435), Expect = 2.6e-39 Identity = 98/113 (86.73%), Postives = 103/113 (91.15%), Query Frame = 0
BLAST of Moc05g00220 vs. ExPASy Swiss-Prot
Match: P52855 (60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 7.1e-32 Identity = 83/114 (72.81%), Postives = 96/114 (84.21%), Query Frame = 0
BLAST of Moc05g00220 vs. ExPASy Swiss-Prot
Match: Q8LEQ0 (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 SV=2) HSP 1 Score: 125.9 bits (315), Expect = 2.8e-28 Identity = 80/116 (68.97%), Postives = 92/116 (79.31%), Query Frame = 0
BLAST of Moc05g00220 vs. ExPASy Swiss-Prot
Match: Q8LCW9 (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 SV=2) HSP 1 Score: 124.8 bits (312), Expect = 6.3e-28 Identity = 80/116 (68.97%), Postives = 91/116 (78.45%), Query Frame = 0
BLAST of Moc05g00220 vs. ExPASy Swiss-Prot
Match: O23095 (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 SV=2) HSP 1 Score: 124.8 bits (312), Expect = 6.3e-28 Identity = 76/114 (66.67%), Postives = 87/114 (76.32%), Query Frame = 0
BLAST of Moc05g00220 vs. ExPASy Swiss-Prot
Match: Q9HGV0 (60S acidic ribosomal protein P1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=AFUA_1G06830 PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 5.0e-25 Identity = 71/113 (62.83%), Postives = 83/113 (73.45%), Query Frame = 0
BLAST of Moc05g00220 vs. ExPASy TrEMBL
Match: A0A6J1CS45 (60S acidic ribosomal protein P1-like OS=Momordica charantia OX=3673 GN=LOC111013791 PE=3 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 1.8e-49 Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0
BLAST of Moc05g00220 vs. ExPASy TrEMBL
Match: A0A5D3DB57 (60S acidic ribosomal protein P1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00330 PE=3 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 3.8e-44 Identity = 103/113 (91.15%), Postives = 106/113 (93.81%), Query Frame = 0
BLAST of Moc05g00220 vs. ExPASy TrEMBL
Match: A0A1S3AUG9 (60S acidic ribosomal protein P1-like OS=Cucumis melo OX=3656 GN=LOC103483111 PE=3 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 3.8e-44 Identity = 103/113 (91.15%), Postives = 106/113 (93.81%), Query Frame = 0
BLAST of Moc05g00220 vs. ExPASy TrEMBL
Match: A0A0A0L5M7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116860 PE=3 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.2e-42 Identity = 100/113 (88.50%), Postives = 104/113 (92.04%), Query Frame = 0
BLAST of Moc05g00220 vs. ExPASy TrEMBL
Match: A0A6J1ICK4 (60S acidic ribosomal protein P1-like OS=Cucurbita maxima OX=3661 GN=LOC111474378 PE=3 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.3e-39 Identity = 98/113 (86.73%), Postives = 103/113 (91.15%), Query Frame = 0
BLAST of Moc05g00220 vs. TAIR 10
Match: AT5G47700.1 (60S acidic ribosomal protein family ) HSP 1 Score: 125.9 bits (315), Expect = 2.0e-29 Identity = 80/116 (68.97%), Postives = 92/116 (79.31%), Query Frame = 0
BLAST of Moc05g00220 vs. TAIR 10
Match: AT5G47700.2 (60S acidic ribosomal protein family ) HSP 1 Score: 125.9 bits (315), Expect = 2.0e-29 Identity = 80/116 (68.97%), Postives = 92/116 (79.31%), Query Frame = 0
BLAST of Moc05g00220 vs. TAIR 10
Match: AT1G01100.1 (60S acidic ribosomal protein family ) HSP 1 Score: 124.8 bits (312), Expect = 4.4e-29 Identity = 80/116 (68.97%), Postives = 91/116 (78.45%), Query Frame = 0
BLAST of Moc05g00220 vs. TAIR 10
Match: AT1G01100.2 (60S acidic ribosomal protein family ) HSP 1 Score: 124.8 bits (312), Expect = 4.4e-29 Identity = 80/116 (68.97%), Postives = 91/116 (78.45%), Query Frame = 0
BLAST of Moc05g00220 vs. TAIR 10
Match: AT1G01100.4 (60S acidic ribosomal protein family ) HSP 1 Score: 124.8 bits (312), Expect = 4.4e-29 Identity = 80/116 (68.97%), Postives = 91/116 (78.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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