Moc04g33840 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g33840
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Phenylalanine ammonia-lyase
Location	chr4: 25520287 .. 25522881 (-)
RNA-Seq Expression	Moc04g33840
Synteny	Moc04g33840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATGTTGGCATGGGGTTGCGGCTCGACCTCAAGTGGAGGCTAGTAGTAAATGGGTTGTCGATAGTCTGAATAAAGGGACCGATAGTTATGGCATAACGACTAGTTTTGGAGCCACATCCCATCGAAGGACCGATCGAGGAGAAACCCTTCAAAAAGAGCTTATTAGGTGAATTTTTTTCTCATTTTCGTCAGCAACGTCAAGTTTAAATTTTCACTCCATATTTAAGATTTTAGGGGATTCGAACTTGCAACCTTTAGAGGTATATGTCAATTACCCTTAAGCTATGGTCGCTTTGACCTATATAATATTTTTATTAAATAATTTACTAAAAATTAATAGCAGTGACTAAAATAGTTTTTTTTTAACCAATATTTATGAATTAAATTAGAACATTCGAAAATTTTGAAACTGAATTAAAAAATATTTAAAATTTCAAAAAGCAAAATAAGATTTAAGACAAAATTGGGCTTACGTTATTGGTAGGGTTTGTCATTGATGATGTGCAAATACTTAGCGAGTTTGGTCAATAAAATTGAACTATTTTACGGCAATTTTTGGTCTCTTTATTATTGCTTTTTTATTTATGGGCGAGTCGGTGACTTTATTTTATTATTATTATTCTTTTGAAAAAGTTGGTGACTTTAACTAATTGCCTATTTTTTTCTGTCATATAATTAATGAATAAGCCTACACGACGACATAAGTGGTTATAACGAACAAATTTATGGTATTCTTCTACTTATAAGTTAAATAGGAGAAATGGTACCTACGTCATTTTTAATACACTGTTGATGTGTCAAGTAATAAATAGAAGAAGTATGTTACTCTAGTAGTACCAGAAAATTTTCCAGCTATAATTATAGTGTAATTATTGTTATTTTTTTAACAAATTATAAAATATTCCGTTCCTAATTAAACAACCACTTATTTATATATTTTTATTTAAATTGTGATATATTTTTAAATAGTATAATATATCGTTTTTGGGATTTTTTTAATAATGTGAATTTTTAAAATATTTACCAAAATATGCCTCATCTCAAACTAATTACAAGAATAATGCTTTGAAATCAGAGGCGACCAACAAACGTGGCGCTTACTCAGCGCCACGGTAATTTTTTTTTTAAAATTAACCATGGTTGAAGAGACGACCATGTCTTTTTTTCTTTATTTTTTTAAAATACTAGGTTTTTTTTTACTTTGGTCGTCTCTGAAGAGACGACCAGAAGAGGTTGCGGCGGCTAGACGGTGGACTGATCGGCGGAGACGGCGGCGGAAAAATCGGCGGCGGCGGCGGCTGAATGTATTTTGGATATGGGGATAGGGGTGAGGGGTTAGGGTTTTTAAAACGAAACCTATTTTAAAAACCCAAGAGACGACCAAGGCGCCAGCTGACGCCCATAAGAGACGACCAAGCGGGATTTGAAAAAATCCCGCCTAAAATGTCGTCTCTTCAAGAGACGACATGTTACGTTATTTTAAAGAAAAAAAGAAAAAAAAGACATGGTCGTCTCTTCAACCATGGTTAATTTTAAAAAAAAAAAATTACAGTGGCGCTGAGTAAGCGCCACGTTTGTTGGTTGTCTCTTCAAGAGACAGACCAACTTATGCCAGCTCATAGGTCGTCTCTTCAAGAGACGACCTATGAATTTCAAAGCATTATTCTTGTAATTAGTTTGAGATGAGGTATATTTTGGTAAATATTTTAAAAATTCACATTATTAAAAAAAAACCCTCGTTTTTGCCCCTCGAAATGTCATAATAAGTTTATATTGTTGTTAAATTTTGAAATTTTAATAATCAATTTCTGAAAAGAAATTTCAAAACTAAATCAATTACTTATGATTTTAAGATTTTAGTTAATATTTAAAGATGTTTTCAAAAATTAAATTAGGAAACAAATATATCATTTTAAAAGAAATTCAATGTTCTTGAAAATACTAAAGAGACAACAACTAAAAATAATTTTGTAATAAGATGGAACTTAAAAAAAAATTATATATATATATAATATATATTTGACCTCTAAAATAAATTTCAACAATAAATGATTGATTGGTAGCATTACTTATTACTAGATAAAGAATTTTTAAGGTTTACTCAAACTTGCAGAGATTAATATGCTTTATTTTCCTAGAAAAAAAAGATAAATGGGTTAGAATTTTATTTTACTTTAATGAATTATTGATGGAGTAATTTGTGTGTGGACAGATTTTTAAACGCTGGAATTTTTGGGAATGATCCAAATTCTCTCAACACATTGCCACAGTCAGCAACACGAGCCGCTATGCTTGTGAGAATCAACACTCTTTTGCAAGGCTATTCGAGGATTAGGTTTGAAATTTTAGAAGCCATAACCAGATTGCTCAACCATTACATAACCCCATGTCTTCCTCTTAGAGGCACAATTACTGCTTCTGGTGACCTCGTCCCTCTCTCTTACATTGTTGCACTTTTGATTGGTAGGCCCAATTCTAGGGCCATTGGACCGAGTGACAAATGTCTCAACCCAAACCAGGCCTTCCATCTCGCAGAGATCAATGATGGATTCTTCCATTTGCAGCCGAAAAGAAGGTCTTGCTCTTGTTAA

mRNA sequence

ATGAAATGTTGGCATGGGGTTGCGGCTCGACCTCAAGTGGAGGCTAGTAGTAAATGGGTTGTCGATAGTCTGAATAAAGGGACCGATAGTTATGGCATAACGACTAGTTTTGGAGCCACATCCCATCGAAGGACCGATCGAGGAGAAACCCTTCAAAAAGAGCTTATTAGATTTTTAAACGCTGGAATTTTTGGGAATGATCCAAATTCTCTCAACACATTGCCACAGTCAGCAACACGAGCCGCTATGCTTGTGAGAATCAACACTCTTTTGCAAGGCTATTCGAGGATTAGGTTTGAAATTTTAGAAGCCATAACCAGATTGCTCAACCATTACATAACCCCATGTCTTCCTCTTAGAGGCACAATTACTGCTTCTGGTGACCTCGTCCCTCTCTCTTACATTGTTGCACTTTTGATTGGTAGGCCCAATTCTAGGGCCATTGGACCGAGTGACAAATGTCTCAACCCAAACCAGGCCTTCCATCTCGCAGAGATCAATGATGGATTCTTCCATTTGCAGCCGAAAAGAAGGTCTTGCTCTTGTTAA

Coding sequence (CDS)

ATGAAATGTTGGCATGGGGTTGCGGCTCGACCTCAAGTGGAGGCTAGTAGTAAATGGGTTGTCGATAGTCTGAATAAAGGGACCGATAGTTATGGCATAACGACTAGTTTTGGAGCCACATCCCATCGAAGGACCGATCGAGGAGAAACCCTTCAAAAAGAGCTTATTAGATTTTTAAACGCTGGAATTTTTGGGAATGATCCAAATTCTCTCAACACATTGCCACAGTCAGCAACACGAGCCGCTATGCTTGTGAGAATCAACACTCTTTTGCAAGGCTATTCGAGGATTAGGTTTGAAATTTTAGAAGCCATAACCAGATTGCTCAACCATTACATAACCCCATGTCTTCCTCTTAGAGGCACAATTACTGCTTCTGGTGACCTCGTCCCTCTCTCTTACATTGTTGCACTTTTGATTGGTAGGCCCAATTCTAGGGCCATTGGACCGAGTGACAAATGTCTCAACCCAAACCAGGCCTTCCATCTCGCAGAGATCAATGATGGATTCTTCCATTTGCAGCCGAAAAGAAGGTCTTGCTCTTGTTAA

Protein sequence

MKCWHGVAARPQVEASSKWVVDSLNKGTDSYGITTSFGATSHRRTDRGETLQKELIRFLNAGIFGNDPNSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITASGDLVPLSYIVALLIGRPNSRAIGPSDKCLNPNQAFHLAEINDGFFHLQPKRRSCSC

Homology

[Close]

BLAST of Moc04g33840 vs. NCBI nr
Match: XP_038883983.1 (phenylalanine ammonia-lyase G4-like [Benincasa hispida])

HSP 1 Score: 276.2 bits (705), Expect = 2.1e-70
Identity = 136/168 (80.95%), Postives = 148/168 (88.10%), Query Frame = 0


Query: 9   ARPQVEASSKWVVDSLNKGTDSYGITTSFGATSHRRTDRGETLQKELIRFLNAGIFGNDP 68
           ARP VEASS+WV  S+  GTDSYG+TT FG+TSHRRTD+GETLQKELIRFLNAGIFGND 
Sbjct: 83  ARPAVEASSRWVFKSITNGTDSYGVTTGFGSTSHRRTDQGETLQKELIRFLNAGIFGNDL 142

Query: 69  NSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITASGD 128
           NS +TLPQ ATRAAM+VRINTLLQGYS IRFEILEAI +LLNH ITPCLPLRGTITASGD
Sbjct: 143 NSCHTLPQQATRAAMVVRINTLLQGYSGIRFEILEAIAKLLNHNITPCLPLRGTITASGD 202

Query: 129 LVPLSYIVALLIGRPNSRAIGPSDKCLNPNQAFHLAEINDGFFHLQPK 177
           LVPLSYI  LLIGRPNS+AIGP+ + LNP +AFHLAEI  GFF LQPK
Sbjct: 203 LVPLSYIAGLLIGRPNSKAIGPNGESLNPIEAFHLAEIGGGFFSLQPK 250

[Close]

BLAST of Moc04g33840 vs. NCBI nr
Match: XP_004149916.1 (phenylalanine ammonia-lyase G4 [Cucumis sativus] >KGN47834.1 hypothetical protein Csa_002790 [Cucumis sativus])

HSP 1 Score: 266.5 bits (680), Expect = 1.6e-67
Identity = 131/168 (77.98%), Postives = 145/168 (86.31%), Query Frame = 0


Query: 9   ARPQVEASSKWVVDSLNKGTDSYGITTSFGATSHRRTDRGETLQKELIRFLNAGIFGNDP 68
           AR  VEASS+WVV+S+  GTDSYG+TT FG+TSHRRTD+GE LQKELIRFLNAGIFG D 
Sbjct: 83  ARSAVEASSRWVVESMTNGTDSYGVTTGFGSTSHRRTDQGEALQKELIRFLNAGIFGKDS 142

Query: 69  NSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITASGD 128
           NS +TL Q ATRAAM+VRINTLLQGYS IRFEILEAI +LLNH ITPCLPLRGTITASGD
Sbjct: 143 NSCHTLSQQATRAAMVVRINTLLQGYSGIRFEILEAIAKLLNHNITPCLPLRGTITASGD 202

Query: 129 LVPLSYIVALLIGRPNSRAIGPSDKCLNPNQAFHLAEINDGFFHLQPK 177
           LVPLSYI  LL GRPNS+AIGP+ + LN N+AFHLA I  GFF+LQPK
Sbjct: 203 LVPLSYIAGLLTGRPNSKAIGPNGESLNSNEAFHLAGITSGFFNLQPK 250

[Close]

BLAST of Moc04g33840 vs. NCBI nr
Match: AYK27181.1 (phenylalanine ammonia lyase [Juglans sigillata])

HSP 1 Score: 263.1 bits (671), Expect = 1.8e-66
Identity = 130/169 (76.92%), Postives = 146/169 (86.39%), Query Frame = 0


Query: 8   AARPQVEASSKWVVDSLNKGTDSYGITTSFGATSHRRTDRGETLQKELIRFLNAGIFGND 67
           AAR  V+ASS WV+DS+NKGTDSYG+TT FGATSHRRT +G  LQKELIRFLNAGIFGND
Sbjct: 86  AARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGND 145

Query: 68  PNSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITASG 127
             S +TLP SATRAAMLVRINTLLQGYS IRFEI+EAIT+LLNH ITPCLPLRGTI+ASG
Sbjct: 146 TESCHTLPHSATRAAMLVRINTLLQGYSGIRFEIMEAITKLLNHNITPCLPLRGTISASG 205

Query: 128 DLVPLSYIVALLIGRPNSRAIGPSDKCLNPNQAFHLAEINDGFFHLQPK 177
           DLVPLSYI  LLIGRPNS+A+GP+ + L+  +AF +A IN GFF LQPK
Sbjct: 206 DLVPLSYIAGLLIGRPNSKAVGPNGESLDATKAFQVAGINGGFFELQPK 254

[Close]

BLAST of Moc04g33840 vs. NCBI nr
Match: XP_035539291.1 (phenylalanine ammonia-lyase G4 [Juglans regia] >KAF5453424.1 hypothetical protein F2P56_028327 [Juglans regia])

HSP 1 Score: 263.1 bits (671), Expect = 1.8e-66
Identity = 130/169 (76.92%), Postives = 146/169 (86.39%), Query Frame = 0


Query: 8   AARPQVEASSKWVVDSLNKGTDSYGITTSFGATSHRRTDRGETLQKELIRFLNAGIFGND 67
           AAR  V+ASS WV+DS+NKGTDSYG+TT FGATSHRRT +G  LQKELIRFLNAGIFGND
Sbjct: 88  AARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGND 147

Query: 68  PNSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITASG 127
             S +TLP SATRAAMLVRINTLLQGYS IRFEI+EAIT+LLNH ITPCLPLRGTI+ASG
Sbjct: 148 TESCHTLPHSATRAAMLVRINTLLQGYSGIRFEIMEAITKLLNHNITPCLPLRGTISASG 207

Query: 128 DLVPLSYIVALLIGRPNSRAIGPSDKCLNPNQAFHLAEINDGFFHLQPK 177
           DLVPLSYI  LLIGRPNS+A+GP+ + L+  +AF +A IN GFF LQPK
Sbjct: 208 DLVPLSYIAGLLIGRPNSKAVGPNGESLDATKAFQVAGINGGFFELQPK 256

[Close]

BLAST of Moc04g33840 vs. NCBI nr
Match: XP_040999826.1 (phenylalanine ammonia-lyase G4 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 263.1 bits (671), Expect = 1.8e-66
Identity = 130/169 (76.92%), Postives = 146/169 (86.39%), Query Frame = 0


Query: 8   AARPQVEASSKWVVDSLNKGTDSYGITTSFGATSHRRTDRGETLQKELIRFLNAGIFGND 67
           AAR  V+ASS WV+DS+NKGTDSYG+TT FGATSHRRT +G  LQKELIRFLNAGIFGND
Sbjct: 86  AARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGND 145

Query: 68  PNSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITASG 127
             S +TLP SATRAAMLVRINTLLQGYS IRFEI+EAIT+LLNH ITPCLPLRGTI+ASG
Sbjct: 146 TESCHTLPHSATRAAMLVRINTLLQGYSGIRFEIMEAITKLLNHNITPCLPLRGTISASG 205

Query: 128 DLVPLSYIVALLIGRPNSRAIGPSDKCLNPNQAFHLAEINDGFFHLQPK 177
           DLVPLSYI  LLIGRPNS+A+GP+ + L+  +AF +A IN GFF LQPK
Sbjct: 206 DLVPLSYIAGLLIGRPNSKAVGPNGESLDATKAFQVAGINGGFFELQPK 254

[Close]

BLAST of Moc04g33840 vs. ExPASy Swiss-Prot
Match: P45733 (Phenylalanine ammonia-lyase OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 3.4e-68
Identity = 127/168 (75.60%), Postives = 142/168 (84.52%), Query Frame = 0


Query: 9   ARPQVEASSKWVVDSLNKGTDSYGITTSFGATSHRRTDRGETLQKELIRFLNAGIFGNDP 68
           AR  V+ASS WV+DS++KGTDSYG+TT FGATSHRRT  G  LQKELIRFLNAG+FGN  
Sbjct: 82  ARAGVKASSDWVMDSMSKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGVFGNGT 141

Query: 69  NSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITASGD 128
            S +TLPQS TRAAMLVRINTLLQGYS IRFEILEAIT+LLNH +TPCLPLRGTITASGD
Sbjct: 142 ESCHTLPQSGTRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNVTPCLPLRGTITASGD 201

Query: 129 LVPLSYIVALLIGRPNSRAIGPSDKCLNPNQAFHLAEINDGFFHLQPK 177
           LVPLSYI  LL GRPNS+AIGP+ + LN  +AF +A +N GFF LQPK
Sbjct: 202 LVPLSYIAGLLTGRPNSKAIGPNGETLNAEEAFRVAGVNSGFFELQPK 249

[Close]

BLAST of Moc04g33840 vs. ExPASy Swiss-Prot
Match: P35513 (Phenylalanine ammonia-lyase OS=Nicotiana tabacum OX=4097 GN=PALA PE=2 SV=2)

HSP 1 Score: 258.1 bits (658), Expect = 7.6e-68
Identity = 126/168 (75.00%), Postives = 141/168 (83.93%), Query Frame = 0


Query: 9   ARPQVEASSKWVVDSLNKGTDSYGITTSFGATSHRRTDRGETLQKELIRFLNAGIFGNDP 68
           AR  V+ASS WV+DS+ KGTDSYG+TT FGATSHRRT  G  LQKELIRFLNAG+FGN  
Sbjct: 82  ARAGVKASSDWVMDSMGKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGVFGNGT 141

Query: 69  NSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITASGD 128
            S +TLPQS TRAAMLVRINTLLQGYS IRFEILEAIT+LLNH +TPCLPLRGTITASGD
Sbjct: 142 ESCHTLPQSGTRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNVTPCLPLRGTITASGD 201

Query: 129 LVPLSYIVALLIGRPNSRAIGPSDKCLNPNQAFHLAEINDGFFHLQPK 177
           LVPLSYI  LL GRPNS+A+GP+ + LN  +AF +A +N GFF LQPK
Sbjct: 202 LVPLSYIAGLLTGRPNSKAVGPNGETLNAEEAFRVAGVNGGFFELQPK 249

[Close]

BLAST of Moc04g33840 vs. ExPASy Swiss-Prot
Match: P25872 (Phenylalanine ammonia-lyase OS=Nicotiana tabacum OX=4097 GN=TPA1 PE=2 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 8.4e-67
Identity = 125/168 (74.40%), Postives = 141/168 (83.93%), Query Frame = 0


Query: 9   ARPQVEASSKWVVDSLNKGTDSYGITTSFGATSHRRTDRGETLQKELIRFLNAGIFGNDP 68
           AR  V+ASS WV+DS+NKGTDSYG+TT FGATSHRRT  G  LQKELIRFLNAG+FGN  
Sbjct: 85  ARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGVFGNGT 144

Query: 69  NSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITASGD 128
            + +TLP SATRAAMLVRINTLLQGYS IRFEILEAIT+L+N  ITPCLPLRGTITASGD
Sbjct: 145 ETSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLINSNITPCLPLRGTITASGD 204

Query: 129 LVPLSYIVALLIGRPNSRAIGPSDKCLNPNQAFHLAEINDGFFHLQPK 177
           LVPLSYI  LL GRPNS+A+GP+ + LN  +AF +A +N GFF LQPK
Sbjct: 205 LVPLSYIAGLLTGRPNSKAVGPNGETLNAEEAFRVAGVNGGFFELQPK 252

[Close]

BLAST of Moc04g33840 vs. ExPASy Swiss-Prot
Match: Q42667 (Phenylalanine ammonia-lyase OS=Citrus limon OX=2708 GN=PAL6 PE=2 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.1e-66
Identity = 125/169 (73.96%), Postives = 141/169 (83.43%), Query Frame = 0


Query: 8   AARPQVEASSKWVVDSLNKGTDSYGITTSFGATSHRRTDRGETLQKELIRFLNAGIFGND 67
           AAR  V+ASS WV+DS+ KGTDSYG+TT FGATSHRRT +G  LQKELIRFLN+GIFGN 
Sbjct: 89  AARAGVKASSDWVMDSMMKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNSGIFGNG 148

Query: 68  PNSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITASG 127
             S +TLP SATRAAMLVR+NTLLQGYS IRFEILE IT+ LNH ITPCLPLRGTITASG
Sbjct: 149 TESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILETITKFLNHNITPCLPLRGTITASG 208

Query: 128 DLVPLSYIVALLIGRPNSRAIGPSDKCLNPNQAFHLAEINDGFFHLQPK 177
           DLVPLSYI  LL GRPNS+A+G + + LNP +AF+LA +  GFF LQPK
Sbjct: 209 DLVPLSYIAGLLTGRPNSKAVGSNGQVLNPTEAFNLAGVTSGFFELQPK 257

[Close]

BLAST of Moc04g33840 vs. ExPASy Swiss-Prot
Match: O49835 (Phenylalanine ammonia-lyase 1 OS=Lithospermum erythrorhizon OX=34254 PE=2 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.4e-66
Identity = 127/169 (75.15%), Postives = 142/169 (84.02%), Query Frame = 0


Query: 8   AARPQVEASSKWVVDSLNKGTDSYGITTSFGATSHRRTDRGETLQKELIRFLNAGIFGND 67
           AAR  V+ASS WV+DS+NKGTDSYG+TT FGATSHRRT +G  LQKELIRFLNAGIFGN 
Sbjct: 79  AAREGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNG 138

Query: 68  PNSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITASG 127
             + +TLP SATRAAMLVRINTLLQGYS IRFEILEAIT+ LN  ITPCLPLRGTITASG
Sbjct: 139 TETSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNTNITPCLPLRGTITASG 198

Query: 128 DLVPLSYIVALLIGRPNSRAIGPSDKCLNPNQAFHLAEINDGFFHLQPK 177
           DLVPLSYI  LL GRPNS+A+GP+ + +N  +AF LA I+ GFF LQPK
Sbjct: 199 DLVPLSYIAGLLTGRPNSKAVGPTGEKINAEEAFRLAGISTGFFELQPK 247

[Close]

BLAST of Moc04g33840 vs. ExPASy TrEMBL
Match: A0A0A0KG52 (Phenylalanine ammonia-lyase OS=Cucumis sativus OX=3659 GN=Csa_6G405960 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.9e-68
Identity = 131/168 (77.98%), Postives = 145/168 (86.31%), Query Frame = 0


Query: 9   ARPQVEASSKWVVDSLNKGTDSYGITTSFGATSHRRTDRGETLQKELIRFLNAGIFGNDP 68
           AR  VEASS+WVV+S+  GTDSYG+TT FG+TSHRRTD+GE LQKELIRFLNAGIFG D 
Sbjct: 83  ARSAVEASSRWVVESMTNGTDSYGVTTGFGSTSHRRTDQGEALQKELIRFLNAGIFGKDS 142

Query: 69  NSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITASGD 128
           NS +TL Q ATRAAM+VRINTLLQGYS IRFEILEAI +LLNH ITPCLPLRGTITASGD
Sbjct: 143 NSCHTLSQQATRAAMVVRINTLLQGYSGIRFEILEAIAKLLNHNITPCLPLRGTITASGD 202

Query: 129 LVPLSYIVALLIGRPNSRAIGPSDKCLNPNQAFHLAEINDGFFHLQPK 177
           LVPLSYI  LL GRPNS+AIGP+ + LN N+AFHLA I  GFF+LQPK
Sbjct: 203 LVPLSYIAGLLTGRPNSKAIGPNGESLNSNEAFHLAGITSGFFNLQPK 250

[Close]

BLAST of Moc04g33840 vs. ExPASy TrEMBL
Match: A0A0K8WMM3 (Phenylalanine ammonia-lyase OS=Acacia koa OX=468172 GN=pal1 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.4e-67
Identity = 130/169 (76.92%), Postives = 145/169 (85.80%), Query Frame = 0


Query: 8   AARPQVEASSKWVVDSLNKGTDSYGITTSFGATSHRRTDRGETLQKELIRFLNAGIFGND 67
           +AR  V+ASS WV+DS+NKGTDSYG+TT FGATSHRRT +G  LQKELIRFLNAGIFGN 
Sbjct: 84  SARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGAALQKELIRFLNAGIFGNG 143

Query: 68  PNSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITASG 127
             S +TLP SATRAAMLVRINTLLQGYS IRFEILEA+T+ LNH ITPCLPLRGTITASG
Sbjct: 144 TESCHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAMTKFLNHNITPCLPLRGTITASG 203

Query: 128 DLVPLSYIVALLIGRPNSRAIGPSDKCLNPNQAFHLAEINDGFFHLQPK 177
           DLVPLSY+  LLIGRPNS++IGP  + L+P +AFHLA IN GFF LQPK
Sbjct: 204 DLVPLSYVAGLLIGRPNSKSIGPDGRVLSPKEAFHLAGINGGFFELQPK 252

[Close]

BLAST of Moc04g33840 vs. ExPASy TrEMBL
Match: A0A3G1VTD0 (Phenylalanine ammonia-lyase OS=Juglans sigillata OX=224355 GN=PAL PE=2 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 8.8e-67
Identity = 130/169 (76.92%), Postives = 146/169 (86.39%), Query Frame = 0


Query: 8   AARPQVEASSKWVVDSLNKGTDSYGITTSFGATSHRRTDRGETLQKELIRFLNAGIFGND 67
           AAR  V+ASS WV+DS+NKGTDSYG+TT FGATSHRRT +G  LQKELIRFLNAGIFGND
Sbjct: 86  AARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGND 145

Query: 68  PNSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITASG 127
             S +TLP SATRAAMLVRINTLLQGYS IRFEI+EAIT+LLNH ITPCLPLRGTI+ASG
Sbjct: 146 TESCHTLPHSATRAAMLVRINTLLQGYSGIRFEIMEAITKLLNHNITPCLPLRGTISASG 205

Query: 128 DLVPLSYIVALLIGRPNSRAIGPSDKCLNPNQAFHLAEINDGFFHLQPK 177
           DLVPLSYI  LLIGRPNS+A+GP+ + L+  +AF +A IN GFF LQPK
Sbjct: 206 DLVPLSYIAGLLIGRPNSKAVGPNGESLDATKAFQVAGINGGFFELQPK 254

[Close]

BLAST of Moc04g33840 vs. ExPASy TrEMBL
Match: A0A6P9DVU6 (Phenylalanine ammonia-lyase OS=Juglans regia OX=51240 GN=LOC109008959 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 8.8e-67
Identity = 130/169 (76.92%), Postives = 146/169 (86.39%), Query Frame = 0


Query: 8   AARPQVEASSKWVVDSLNKGTDSYGITTSFGATSHRRTDRGETLQKELIRFLNAGIFGND 67
           AAR  V+ASS WV+DS+NKGTDSYG+TT FGATSHRRT +G  LQKELIRFLNAGIFGND
Sbjct: 88  AARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGND 147

Query: 68  PNSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITASG 127
             S +TLP SATRAAMLVRINTLLQGYS IRFEI+EAIT+LLNH ITPCLPLRGTI+ASG
Sbjct: 148 TESCHTLPHSATRAAMLVRINTLLQGYSGIRFEIMEAITKLLNHNITPCLPLRGTISASG 207

Query: 128 DLVPLSYIVALLIGRPNSRAIGPSDKCLNPNQAFHLAEINDGFFHLQPK 177
           DLVPLSYI  LLIGRPNS+A+GP+ + L+  +AF +A IN GFF LQPK
Sbjct: 208 DLVPLSYIAGLLIGRPNSKAVGPNGESLDATKAFQVAGINGGFFELQPK 256

[Close]

BLAST of Moc04g33840 vs. ExPASy TrEMBL
Match: A0A200R5P5 (Phenylalanine ammonia-lyase OS=Macleaya cordata OX=56857 GN=BVC80_1835g459 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.5e-66
Identity = 130/169 (76.92%), Postives = 145/169 (85.80%), Query Frame = 0


Query: 8   AARPQVEASSKWVVDSLNKGTDSYGITTSFGATSHRRTDRGETLQKELIRFLNAGIFGND 67
           +AR  V+ASS WV++S+NKGTDSYG+TT FGATSHRRT +G  LQKELIRFLNAGIFGN 
Sbjct: 83  SARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNG 142

Query: 68  PNSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITASG 127
             S +TLP SATRAAMLVRINTLLQGYS IRFEILEAIT+ LNH ITPCLPLRGTITASG
Sbjct: 143 TESSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNHNITPCLPLRGTITASG 202

Query: 128 DLVPLSYIVALLIGRPNSRAIGPSDKCLNPNQAFHLAEINDGFFHLQPK 177
           DLVPLSYI  LL GRPNS+A+GP+ + L+P QAF+LA IN GFF LQPK
Sbjct: 203 DLVPLSYIAGLLTGRPNSKAVGPNGESLDPTQAFNLAGINGGFFELQPK 251

[Close]

BLAST of Moc04g33840 vs. TAIR 10
Match: AT3G53260.1 (phenylalanine ammonia-lyase 2 )

HSP 1 Score: 242.7 bits (618), Expect = 2.4e-64
Identity = 122/168 (72.62%), Postives = 136/168 (80.95%), Query Frame = 0


Query: 9   ARPQVEASSKWVVDSLNKGTDSYGITTSFGATSHRRTDRGETLQKELIRFLNAGIFGNDP 68
           +R  V+ASS WV++S+NKGTDSYG+TT FGATSHRRT  G  LQ ELIRFLNAGIFGN  
Sbjct: 87  SRAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGTALQTELIRFLNAGIFGNTK 146

Query: 69  NSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITASGD 128
            + +TLPQSATRAAMLVR+NTLLQGYS IRFEILEAIT LLNH I+P LPLRGTITASGD
Sbjct: 147 ETCHTLPQSATRAAMLVRVNTLLQGYSGIRFEILEAITSLLNHNISPSLPLRGTITASGD 206

Query: 129 LVPLSYIVALLIGRPNSRAIGPSDKCLNPNQAFHLAEINDGFFHLQPK 177
           LVPLSYI  LL GRPNS+A GP  + L   +AF  A I+ GFF LQPK
Sbjct: 207 LVPLSYIAGLLTGRPNSKATGPDGESLTAKEAFEKAGISTGFFDLQPK 254

[Close]

BLAST of Moc04g33840 vs. TAIR 10
Match: AT2G37040.1 (PHE ammonia lyase 1 )

HSP 1 Score: 240.4 bits (612), Expect = 1.2e-63
Identity = 122/168 (72.62%), Postives = 136/168 (80.95%), Query Frame = 0


Query: 9   ARPQVEASSKWVVDSLNKGTDSYGITTSFGATSHRRTDRGETLQKELIRFLNAGIFGNDP 68
           AR  V ASS WV++S+NKGTDSYG+TT FGATSHRRT  G  LQKELIRFLNAGIFG+  
Sbjct: 95  ARAGVNASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGVALQKELIRFLNAGIFGSTK 154

Query: 69  NSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITASGD 128
            + +TLP SATRAAMLVRINTLLQG+S IRFEILEAIT  LN+ ITP LPLRGTITASGD
Sbjct: 155 ETSHTLPHSATRAAMLVRINTLLQGFSGIRFEILEAITSFLNNNITPSLPLRGTITASGD 214

Query: 129 LVPLSYIVALLIGRPNSRAIGPSDKCLNPNQAFHLAEINDGFFHLQPK 177
           LVPLSYI  LL GRPNS+A GP+ + L   +AF LA I+ GFF LQPK
Sbjct: 215 LVPLSYIAGLLTGRPNSKATGPNGEALTAEEAFKLAGISSGFFDLQPK 262

[Close]

BLAST of Moc04g33840 vs. TAIR 10
Match: AT3G10340.1 (phenylalanine ammonia-lyase 4 )

HSP 1 Score: 236.5 bits (602), Expect = 1.7e-62
Identity = 120/169 (71.01%), Postives = 141/169 (83.43%), Query Frame = 0


Query: 9   ARPQVEASSKWVVDSLNKGTDSYGITTSFGATSHRRTDRGETLQKELIRFLNAGIFG-ND 68
           AR  V+ASS+WV++S+N+GTDSYG+TT FGATSHRRT +G  LQ ELIRFLNAGIFG   
Sbjct: 77  ARAGVKASSEWVMESMNRGTDSYGVTTGFGATSHRRTKQGGALQNELIRFLNAGIFGPGA 136

Query: 69  PNSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITASG 128
            ++ +TLP+  TRAAMLVR+NTLLQGYS IRFEILEAIT+LLNH ITPCLPLRGTITASG
Sbjct: 137 GDTSHTLPKPTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHEITPCLPLRGTITASG 196

Query: 129 DLVPLSYIVALLIGRPNSRAIGPSDKCLNPNQAFHLAEINDGFFHLQPK 177
           DLVPLSYI  LL GRPNS+A+GPS + L  ++AF LA ++  FF LQPK
Sbjct: 197 DLVPLSYIAGLLTGRPNSKAVGPSGETLTASEAFKLAGVS-SFFELQPK 244

[Close]

BLAST of Moc04g33840 vs. TAIR 10
Match: AT5G04230.1 (phenyl alanine ammonia-lyase 3 )

HSP 1 Score: 221.1 bits (562), Expect = 7.3e-58
Identity = 117/171 (68.42%), Postives = 138/171 (80.70%), Query Frame = 0


Query: 9   ARPQVEASSKWVVDSLNKGTDSYGITTSFGATSHRRTDRGETLQKELIRFLNAGIF--GN 68
           AR  V+ASS WV++S+N+ TD+YGITT FG++S RRTD+G  LQKELIR+LNAGIF  GN
Sbjct: 72  ARGGVKASSDWVMESMNRDTDTYGITTGFGSSSRRRTDQGAALQKELIRYLNAGIFATGN 131

Query: 69  -DPNSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITA 128
            D +  NTLP+ ATRAAML+R+NTLLQGYS IRFEILEAIT LLN  ITP LPLRGTITA
Sbjct: 132 EDDDRSNTLPRPATRAAMLIRVNTLLQGYSGIRFEILEAITTLLNCKITPLLPLRGTITA 191

Query: 129 SGDLVPLSYIVALLIGRPNSRAIGPSDKCLNPNQAFHLAEINDGFFHLQPK 177
           SGDLVPLSYI   LIGRPNSR++GPS + L   +AF LA ++  FF L+PK
Sbjct: 192 SGDLVPLSYIAGFLIGRPNSRSVGPSGEILTALEAFKLAGVS-SFFELRPK 241

[Close]

BLAST of Moc04g33840 vs. TAIR 10
Match: AT5G04230.2 (phenyl alanine ammonia-lyase 3 )

HSP 1 Score: 221.1 bits (562), Expect = 7.3e-58
Identity = 117/171 (68.42%), Postives = 138/171 (80.70%), Query Frame = 0


Query: 9   ARPQVEASSKWVVDSLNKGTDSYGITTSFGATSHRRTDRGETLQKELIRFLNAGIF--GN 68
           AR  V+ASS WV++S+N+ TD+YGITT FG++S RRTD+G  LQKELIR+LNAGIF  GN
Sbjct: 72  ARGGVKASSDWVMESMNRDTDTYGITTGFGSSSRRRTDQGAALQKELIRYLNAGIFATGN 131

Query: 69  -DPNSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITA 128
            D +  NTLP+ ATRAAML+R+NTLLQGYS IRFEILEAIT LLN  ITP LPLRGTITA
Sbjct: 132 EDDDRSNTLPRPATRAAMLIRVNTLLQGYSGIRFEILEAITTLLNCKITPLLPLRGTITA 191

Query: 129 SGDLVPLSYIVALLIGRPNSRAIGPSDKCLNPNQAFHLAEINDGFFHLQPK 177
           SGDLVPLSYI   LIGRPNSR++GPS + L   +AF LA ++  FF L+PK
Sbjct: 192 SGDLVPLSYIAGFLIGRPNSRSVGPSGEILTALEAFKLAGVS-SFFELRPK 241

The following BLAST results are available for this feature:

BLAST of Moc04g33840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883983.1	2.1e-70	80.95	phenylalanine ammonia-lyase G4-like [Benincasa hispida]	[more]
XP_004149916.1	1.6e-67	77.98	phenylalanine ammonia-lyase G4 [Cucumis sativus] >KGN47834.1 hypothetical protei...	[more]
AYK27181.1	1.8e-66	76.92	phenylalanine ammonia lyase [Juglans sigillata]	[more]
XP_035539291.1	1.8e-66	76.92	phenylalanine ammonia-lyase G4 [Juglans regia] >KAF5453424.1 hypothetical protei...	[more]
XP_040999826.1	1.8e-66	76.92	phenylalanine ammonia-lyase G4 [Juglans microcarpa x Juglans regia]	[more]

BLAST of Moc04g33840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P45733	3.4e-68	75.60	Phenylalanine ammonia-lyase OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P35513	7.6e-68	75.00	Phenylalanine ammonia-lyase OS=Nicotiana tabacum OX=4097 GN=PALA PE=2 SV=2	[more]
P25872	8.4e-67	74.40	Phenylalanine ammonia-lyase OS=Nicotiana tabacum OX=4097 GN=TPA1 PE=2 SV=1	[more]
Q42667	1.1e-66	73.96	Phenylalanine ammonia-lyase OS=Citrus limon OX=2708 GN=PAL6 PE=2 SV=1	[more]
O49835	1.4e-66	75.15	Phenylalanine ammonia-lyase 1 OS=Lithospermum erythrorhizon OX=34254 PE=2 SV=1	[more]

BLAST of Moc04g33840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG52	7.9e-68	77.98	Phenylalanine ammonia-lyase OS=Cucumis sativus OX=3659 GN=Csa_6G405960 PE=3 SV=1	[more]
A0A0K8WMM3	1.4e-67	76.92	Phenylalanine ammonia-lyase OS=Acacia koa OX=468172 GN=pal1 PE=3 SV=1	[more]
A0A3G1VTD0	8.8e-67	76.92	Phenylalanine ammonia-lyase OS=Juglans sigillata OX=224355 GN=PAL PE=2 SV=1	[more]
A0A6P9DVU6	8.8e-67	76.92	Phenylalanine ammonia-lyase OS=Juglans regia OX=51240 GN=LOC109008959 PE=3 SV=1	[more]
A0A200R5P5	1.5e-66	76.92	Phenylalanine ammonia-lyase OS=Macleaya cordata OX=56857 GN=BVC80_1835g459 PE=3 ...	[more]

BLAST of Moc04g33840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53260.1	2.4e-64	72.62	phenylalanine ammonia-lyase 2	[more]
AT2G37040.1	1.2e-63	72.62	PHE ammonia lyase 1	[more]
AT3G10340.1	1.7e-62	71.01	phenylalanine ammonia-lyase 4	[more]
AT5G04230.1	7.3e-58	68.42	phenyl alanine ammonia-lyase 3	[more]
AT5G04230.2	7.3e-58	68.42	phenyl alanine ammonia-lyase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001106	Aromatic amino acid lyase	PFAM	PF00221	Lyase_aromatic	coord: 8..160 e-value: 3.1E-41 score: 141.5
IPR001106	Aromatic amino acid lyase	PANTHER	PTHR10362	HISTIDINE AMMONIA-LYASE	coord: 8..177
IPR024083	Fumarase/histidase, N-terminal	GENE3D	1.10.275.10		coord: 5..178 e-value: 1.6E-58 score: 200.0
None	No IPR available	PANTHER	PTHR10362:SF51	PHENYLALANINE AMMONIA-LYASE	coord: 8..177
IPR022313	Phenylalanine/histidine ammonia-lyases, active site	PROSITE	PS00488	PAL_HISTIDASE	coord: 121..137
IPR008948	L-Aspartase-like	SUPERFAMILY	48557	L-aspartase-like	coord: 7..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g33840.1	Moc04g33840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009800	cinnamic acid biosynthetic process
biological_process	GO:0006559	L-phenylalanine catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0045548	phenylalanine ammonia-lyase activity
molecular_function	GO:0016841	ammonia-lyase activity
molecular_function	GO:0003824	catalytic activity