Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCTATTTCCTCACAGGCCTGGCCGACGAGATTTTGACAGTTAAGCTGGGAGAAGAAGCTCTATCAACCTTTGTCGAGGTCTTGCAGAAGGCCAAAAAAGTAATCGATGGGCAAGAACTGCTCAAAACAAAAACAGGTAGGACAGAAAAGAAAGTCTATACAGAAAAAGTCCAACAACCTGGACAATGGGAAGTCAGATTCCAAGTCTAAGGACAAGGTATCGTCTTCTCAACCCTCCCAGGGCCGATCCGATTACAGAAGGTCAGATTCGGGTTCCAGTCGAAGAAGACCTTATGAACGATACACTCCTGCAACCATCCCTATCTCTGAGATCCTTACTAACGACAGCTATTACCGTTTCCACCGCCACCACAACCACGATACCTCGAGTTGTTGGGAACTGAACACCAGATTGAAGACCTGATTCAAGACCTGATTCAAGATGGCTATTTCAAAAAGTATGTTAGCAAGCCGAGATCGAACTTGGTAGAAAAGAAAGATGAGAGGAAGCATTCAAGGACACCACCTCGGAGAGATGACCGACCTGCGATCATCAACACCATACTCGGAGGCCCAAGTGGGGGCCAATTCGGAAACAAAAGGAAGGAGCTTGCTAGGGAAGCTAGGCACGAAGTTTGCGCCATATAG
mRNA sequence
ATGTGCTATTTCCTCACAGGCCTGGCCGACGAGATTTTGACAGTTAAGCTGGGAGAAGAAGCTCTATCAACCTTTGTCGAGGTCTTGCAGAAGGCCAAAAAAGTAATCGATGGGCAAGAACTGCTCAAAACAAAAACAGGGCCGATCCGATTACAGAAGCTATTACCGTTTCCACCGCCACCACAACCACGATACCTCGAGTTGTTGGGAACTGAACACCAGATTGAAGACCTGATTCAAGACCTGATTCAAGATGGCTATTTCAAAAAGTATGTTAGCAAGCCGAGATCGAACTTGGTAGAAAAGAAAGATGAGAGGAAGCATTCAAGGACACCACCTCGGAGAGATGACCGACCTGCGATCATCAACACCATACTCGGAGGCCCAAGTGGGGGCCAATTCGGAAACAAAAGGAAGGAGCTTGCTAGGGAAGCTAGGCACGAAGTTTGCGCCATATAG
Coding sequence (CDS)
ATGTGCTATTTCCTCACAGGCCTGGCCGACGAGATTTTGACAGTTAAGCTGGGAGAAGAAGCTCTATCAACCTTTGTCGAGGTCTTGCAGAAGGCCAAAAAAGTAATCGATGGGCAAGAACTGCTCAAAACAAAAACAGGGCCGATCCGATTACAGAAGCTATTACCGTTTCCACCGCCACCACAACCACGATACCTCGAGTTGTTGGGAACTGAACACCAGATTGAAGACCTGATTCAAGACCTGATTCAAGATGGCTATTTCAAAAAGTATGTTAGCAAGCCGAGATCGAACTTGGTAGAAAAGAAAGATGAGAGGAAGCATTCAAGGACACCACCTCGGAGAGATGACCGACCTGCGATCATCAACACCATACTCGGAGGCCCAAGTGGGGGCCAATTCGGAAACAAAAGGAAGGAGCTTGCTAGGGAAGCTAGGCACGAAGTTTGCGCCATATAG
Protein sequence
MCYFLTGLADEILTVKLGEEALSTFVEVLQKAKKVIDGQELLKTKTGPIRLQKLLPFPPPPQPRYLELLGTEHQIEDLIQDLIQDGYFKKYVSKPRSNLVEKKDERKHSRTPPRRDDRPAIINTILGGPSGGQFGNKRKELAREARHEVCAI
Homology
BLAST of Moc04g10610 vs. NCBI nr
Match:
XP_022150385.1 (uncharacterized protein LOC111018561 [Momordica charantia])
HSP 1 Score: 186.4 bits (472), Expect = 1.8e-43
Identity = 104/163 (63.80%), Postives = 118/163 (72.39%), Query Frame = 0
Query: 1 MCYFLTGLADEILTVKLGEEALSTFVEVLQKAKKVIDGQELLKTKTGPIRLQ-------- 60
MCYFLTGLADE LTVKLGEEA +TF EVLQKAKKVIDGQELL+TKTG Q
Sbjct: 124 MCYFLTGLADETLTVKLGEEAPATFAEVLQKAKKVIDGQELLRTKTGRPEKQIDQKKLNQ 183
Query: 61 --KLLPFPPPPQPRYLELLGTE-HQIEDLIQDLIQDGYFKKYVSKPRSNLVEKKDERKHS 120
+ + P + + + +++ I+DLIQDGYFKK+V KPR N VEKK+ERK S
Sbjct: 184 EKRKVDSKPKDKGSSSSVSRIDCWELKRQIEDLIQDGYFKKFVGKPRFNSVEKKEERKRS 243
Query: 121 RTPPRRDDRPAIINTILGGPSGGQFGNKRKELAREARHEVCAI 153
RTPPRRDDRPA+INTI GGPSGGQ GNKRKEL REAR EV I
Sbjct: 244 RTPPRRDDRPAVINTIFGGPSGGQSGNKRKELVREARREVFII 286
BLAST of Moc04g10610 vs. NCBI nr
Match:
XP_022156638.1 (uncharacterized protein LOC111023488 [Momordica charantia])
HSP 1 Score: 181.4 bits (459), Expect = 5.8e-42
Identity = 112/206 (54.37%), Postives = 122/206 (59.22%), Query Frame = 0
Query: 1 MCYFLTGLADEILTVKLGEEALSTFVEVLQKAKKVIDGQELLKTKTGPI----------- 60
MCYFLTGLADE LTVKLGEEA STF EVLQKAKKV+DGQELLKTK G
Sbjct: 153 MCYFLTGLADETLTVKLGEEAPSTFAEVLQKAKKVLDGQELLKTKLGQTDKRRSNSDSNR 212
Query: 61 ------------------------RLQKLLPFPPP--------PQPRY-----------L 120
L+KLL P + RY L
Sbjct: 213 RGPYERYTPTTILIFEILTNIEENGLEKLLKRPDKLRGHPEKCSKDRYCRFHRDDGHDTL 272
Query: 121 ELLGTEHQIEDLIQDLIQDGYFKKYVSKPRSNLVEKKDERKHSRTPPRRDDRPAIINTIL 153
+HQIE DL+QDGYFKKYVSKP ++ +KK+ERKHS+TPPRRDDRPAIINTI
Sbjct: 273 SCWELKHQIE----DLVQDGYFKKYVSKPGASSAQKKEERKHSKTPPRRDDRPAIINTIF 332
BLAST of Moc04g10610 vs. NCBI nr
Match:
XP_022149377.1 (uncharacterized protein LOC111017807 [Momordica charantia])
HSP 1 Score: 177.6 bits (449), Expect = 8.4e-41
Identity = 115/234 (49.15%), Postives = 127/234 (54.27%), Query Frame = 0
Query: 1 MCYFLTGLADEILTVKLGEEALSTFVEVLQKAKKVIDGQELLKTKTG----PIRLQKLL- 60
MCYFLTGLADE LTVKLGEEA +TF EVLQKAKKVIDGQELL+TKTG I +KL+
Sbjct: 142 MCYFLTGLADETLTVKLGEEAPATFAEVLQKAKKVIDGQELLRTKTGRPEKQIDQKKLIQ 201
Query: 61 -----------------------------PFPPPPQPRY-------------LELLGTEH 120
P P RY +E G E
Sbjct: 202 EKRKTDSKSRDKGSSSSASRAEHRRLESGPSRSRPYERYTPTTILISEILTNIEESGMEK 261
Query: 121 -----------------------------------QIEDLIQDLIQDGYFKKYVSKPRSN 153
+++ I+DLIQDGYFKK+V KPRSN
Sbjct: 262 LLKSPEKLRGDPEKRSKDKNCRFHRDHDHNTTSCWELKRQIEDLIQDGYFKKFVGKPRSN 321
BLAST of Moc04g10610 vs. NCBI nr
Match:
XP_022158414.1 (uncharacterized protein LOC111024904 [Momordica charantia])
HSP 1 Score: 172.6 bits (436), Expect = 2.7e-39
Identity = 113/234 (48.29%), Postives = 126/234 (53.85%), Query Frame = 0
Query: 1 MCYFLTGLADEILTVKLGEEALSTFVEVLQKAKKVIDGQELLKTKTG----PIRLQKLL- 60
MCYFLT LADE LTVKLGEEA +TFVEVLQKAKKVIDGQELL+TKTG I +KL
Sbjct: 96 MCYFLTSLADETLTVKLGEEAPTTFVEVLQKAKKVIDGQELLRTKTGRPEKQIDQKKLSQ 155
Query: 61 -----------------------------PFPPPPQPRY-------------LELLGTEH 120
P P RY +E G E
Sbjct: 156 EKRKADSKSRDKGSSSSASRTEYRRLESGPSRSRPYERYTSSTIPISEILTNIEESGMEK 215
Query: 121 -----------------------------------QIEDLIQDLIQDGYFKKYVSKPRSN 153
+++ I+DLIQDGYFKK+V KPRSN
Sbjct: 216 LLKRPEKLRGDLEKRNKEKYCRFHRDHGHNTTSCWELKRQIEDLIQDGYFKKFVGKPRSN 275
BLAST of Moc04g10610 vs. NCBI nr
Match:
XP_022157193.1 (uncharacterized protein LOC111023967 [Momordica charantia])
HSP 1 Score: 170.6 bits (431), Expect = 1.0e-38
Identity = 101/182 (55.49%), Postives = 116/182 (63.74%), Query Frame = 0
Query: 1 MCYFLTGLADEILTVKLGEEALSTFVEVLQKAKKVIDGQELLKTKTG------------- 60
MCYFLT LA+E LTV+L EEA STF +VLQKAKKVIDGQELLK K G
Sbjct: 83 MCYFLTSLANETLTVQLSEEAPSTFADVLQKAKKVIDGQELLKPKLGRTDKRSDQKKSGN 142
Query: 61 ------PIRLQKLLPFPPP--------PQPRYLELLGTEHQIEDL---IQDLIQDGYFKK 120
+L+KLL P + Y +H + +L I+DLIQDGYFKK
Sbjct: 143 QEKGKSDSKLEKLLKRPNKLRGDSERCNKDMYCH-FHLDHGLLELKRQIEDLIQDGYFKK 202
Query: 121 YVSKPRSNLVEKKDERKHSRTPPRRDDRPAIINTILGGPSGGQFGNKRKELAREARHEVC 153
YV KP S+ EKK+E+KHSRTPPRRDDRPAIIN I GGPS G FGNKRK+L RE R EVC
Sbjct: 203 YVGKPGSSSTEKKEEKKHSRTPPRRDDRPAIINIIFGGPSEGTFGNKRKKLVREGRREVC 262
BLAST of Moc04g10610 vs. ExPASy TrEMBL
Match:
A0A6J1D8C0 (uncharacterized protein LOC111018561 OS=Momordica charantia OX=3673 GN=LOC111018561 PE=4 SV=1)
HSP 1 Score: 186.4 bits (472), Expect = 8.7e-44
Identity = 104/163 (63.80%), Postives = 118/163 (72.39%), Query Frame = 0
Query: 1 MCYFLTGLADEILTVKLGEEALSTFVEVLQKAKKVIDGQELLKTKTGPIRLQ-------- 60
MCYFLTGLADE LTVKLGEEA +TF EVLQKAKKVIDGQELL+TKTG Q
Sbjct: 124 MCYFLTGLADETLTVKLGEEAPATFAEVLQKAKKVIDGQELLRTKTGRPEKQIDQKKLNQ 183
Query: 61 --KLLPFPPPPQPRYLELLGTE-HQIEDLIQDLIQDGYFKKYVSKPRSNLVEKKDERKHS 120
+ + P + + + +++ I+DLIQDGYFKK+V KPR N VEKK+ERK S
Sbjct: 184 EKRKVDSKPKDKGSSSSVSRIDCWELKRQIEDLIQDGYFKKFVGKPRFNSVEKKEERKRS 243
Query: 121 RTPPRRDDRPAIINTILGGPSGGQFGNKRKELAREARHEVCAI 153
RTPPRRDDRPA+INTI GGPSGGQ GNKRKEL REAR EV I
Sbjct: 244 RTPPRRDDRPAVINTIFGGPSGGQSGNKRKELVREARREVFII 286
BLAST of Moc04g10610 vs. ExPASy TrEMBL
Match:
A0A6J1DR60 (uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023488 PE=4 SV=1)
HSP 1 Score: 181.4 bits (459), Expect = 2.8e-42
Identity = 112/206 (54.37%), Postives = 122/206 (59.22%), Query Frame = 0
Query: 1 MCYFLTGLADEILTVKLGEEALSTFVEVLQKAKKVIDGQELLKTKTGPI----------- 60
MCYFLTGLADE LTVKLGEEA STF EVLQKAKKV+DGQELLKTK G
Sbjct: 153 MCYFLTGLADETLTVKLGEEAPSTFAEVLQKAKKVLDGQELLKTKLGQTDKRRSNSDSNR 212
Query: 61 ------------------------RLQKLLPFPPP--------PQPRY-----------L 120
L+KLL P + RY L
Sbjct: 213 RGPYERYTPTTILIFEILTNIEENGLEKLLKRPDKLRGHPEKCSKDRYCRFHRDDGHDTL 272
Query: 121 ELLGTEHQIEDLIQDLIQDGYFKKYVSKPRSNLVEKKDERKHSRTPPRRDDRPAIINTIL 153
+HQIE DL+QDGYFKKYVSKP ++ +KK+ERKHS+TPPRRDDRPAIINTI
Sbjct: 273 SCWELKHQIE----DLVQDGYFKKYVSKPGASSAQKKEERKHSKTPPRRDDRPAIINTIF 332
BLAST of Moc04g10610 vs. ExPASy TrEMBL
Match:
A0A6J1D7S8 (uncharacterized protein LOC111017807 OS=Momordica charantia OX=3673 GN=LOC111017807 PE=4 SV=1)
HSP 1 Score: 177.6 bits (449), Expect = 4.0e-41
Identity = 115/234 (49.15%), Postives = 127/234 (54.27%), Query Frame = 0
Query: 1 MCYFLTGLADEILTVKLGEEALSTFVEVLQKAKKVIDGQELLKTKTG----PIRLQKLL- 60
MCYFLTGLADE LTVKLGEEA +TF EVLQKAKKVIDGQELL+TKTG I +KL+
Sbjct: 142 MCYFLTGLADETLTVKLGEEAPATFAEVLQKAKKVIDGQELLRTKTGRPEKQIDQKKLIQ 201
Query: 61 -----------------------------PFPPPPQPRY-------------LELLGTEH 120
P P RY +E G E
Sbjct: 202 EKRKTDSKSRDKGSSSSASRAEHRRLESGPSRSRPYERYTPTTILISEILTNIEESGMEK 261
Query: 121 -----------------------------------QIEDLIQDLIQDGYFKKYVSKPRSN 153
+++ I+DLIQDGYFKK+V KPRSN
Sbjct: 262 LLKSPEKLRGDPEKRSKDKNCRFHRDHDHNTTSCWELKRQIEDLIQDGYFKKFVGKPRSN 321
BLAST of Moc04g10610 vs. ExPASy TrEMBL
Match:
A0A6J1DZB9 (uncharacterized protein LOC111024904 OS=Momordica charantia OX=3673 GN=LOC111024904 PE=4 SV=1)
HSP 1 Score: 172.6 bits (436), Expect = 1.3e-39
Identity = 113/234 (48.29%), Postives = 126/234 (53.85%), Query Frame = 0
Query: 1 MCYFLTGLADEILTVKLGEEALSTFVEVLQKAKKVIDGQELLKTKTG----PIRLQKLL- 60
MCYFLT LADE LTVKLGEEA +TFVEVLQKAKKVIDGQELL+TKTG I +KL
Sbjct: 96 MCYFLTSLADETLTVKLGEEAPTTFVEVLQKAKKVIDGQELLRTKTGRPEKQIDQKKLSQ 155
Query: 61 -----------------------------PFPPPPQPRY-------------LELLGTEH 120
P P RY +E G E
Sbjct: 156 EKRKADSKSRDKGSSSSASRTEYRRLESGPSRSRPYERYTSSTIPISEILTNIEESGMEK 215
Query: 121 -----------------------------------QIEDLIQDLIQDGYFKKYVSKPRSN 153
+++ I+DLIQDGYFKK+V KPRSN
Sbjct: 216 LLKRPEKLRGDLEKRNKEKYCRFHRDHGHNTTSCWELKRQIEDLIQDGYFKKFVGKPRSN 275
BLAST of Moc04g10610 vs. ExPASy TrEMBL
Match:
A0A6J1DSR0 (uncharacterized protein LOC111023967 OS=Momordica charantia OX=3673 GN=LOC111023967 PE=4 SV=1)
HSP 1 Score: 170.6 bits (431), Expect = 4.9e-39
Identity = 101/182 (55.49%), Postives = 116/182 (63.74%), Query Frame = 0
Query: 1 MCYFLTGLADEILTVKLGEEALSTFVEVLQKAKKVIDGQELLKTKTG------------- 60
MCYFLT LA+E LTV+L EEA STF +VLQKAKKVIDGQELLK K G
Sbjct: 83 MCYFLTSLANETLTVQLSEEAPSTFADVLQKAKKVIDGQELLKPKLGRTDKRSDQKKSGN 142
Query: 61 ------PIRLQKLLPFPPP--------PQPRYLELLGTEHQIEDL---IQDLIQDGYFKK 120
+L+KLL P + Y +H + +L I+DLIQDGYFKK
Sbjct: 143 QEKGKSDSKLEKLLKRPNKLRGDSERCNKDMYCH-FHLDHGLLELKRQIEDLIQDGYFKK 202
Query: 121 YVSKPRSNLVEKKDERKHSRTPPRRDDRPAIINTILGGPSGGQFGNKRKELAREARHEVC 153
YV KP S+ EKK+E+KHSRTPPRRDDRPAIIN I GGPS G FGNKRK+L RE R EVC
Sbjct: 203 YVGKPGSSSTEKKEEKKHSRTPPRRDDRPAIINIIFGGPSEGTFGNKRKKLVREGRREVC 262
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1D8C0 | 8.7e-44 | 63.80 | uncharacterized protein LOC111018561 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
| A0A6J1DR60 | 2.8e-42 | 54.37 | uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
| A0A6J1D7S8 | 4.0e-41 | 49.15 | uncharacterized protein LOC111017807 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
| A0A6J1DZB9 | 1.3e-39 | 48.29 | uncharacterized protein LOC111024904 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
| A0A6J1DSR0 | 4.9e-39 | 55.49 | uncharacterized protein LOC111023967 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
