Moc04g10150 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g10150
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ty3-gypsy retrotransposon protein
Location	chr4: 7519123 .. 7520364 (+)
RNA-Seq Expression	Moc04g10150
Synteny	Moc04g10150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCACGAACACGATCAAAGCGCAATACGGCGAACCTTCTCAAAGCTCCCTCTTGTATTCTAAACCATATACTAAGAGGATTAATGATTTGAGAATGCCTGCTGGATACCAACCTCCAAAGTTCCAGCATTTCGATGGAAAGGGCAATCCCAAGCAACATATTGCTCACTTCATTAAAACTTATGAGAATGCTGGCACAAGAGGCGATCAACTAGTCAAGCAGTTCGTCCGAATGTTGAAGGGAAACGCCTTTGACTGGTATACTGATCTCGAACCTTAAACAATTGAGAGTTGGGAATAGCTTGAAAGAGAATTCTTGAATCGCTTTTACAGCACAAGGAGAACCGTCAGTATGATGGAGCTCACCAGTTGCAAACAAAGAAAAGGTGAACCGGTTGTCGAATATATGAACTGGTGGAGAGCTCTAAGTCTTGATTGCAAGGACAAACTCACGAAAGTATTTGCTGTAGAAATATGCACCCAAGGCATGAACTGGGGACTTCTTTATATCCTTCAAAGGATAAAACCCCGCACATTCGAAGAACTAGCAACTCGCGCTCAGAACATGGAAAGAAGTATTGCTAGTAAAGGTAATAAAGAGTCTCTAGTCTCAGATGTGAAGAAAAAGAAGAAGGAAATGAAGAGCATAGAGAAGATCTCCAAGGGTTCTACGAAGGAATCTATGGTCATTAACACGACCCCTCTCAAATTTTCCTCGAAAGGAAAAGAAAAAGAAAAGAAGATAAAAAAGCGACAAGATGGAAACGTAAGACGCCGCCTTTCTCTAGAAGGAAGACAAGAAAATGTTTATCCTTTTCCAAATTCTAACTTTGCAGATATGTTAGAGCAACTACTGGAAAAGGGACTCATAGAACTCCCTGAATGCAAACGACCGGAACAGATGGGGAAAACAAATGATCCCAACTATTGTGTATATCATCGAGTCGTTAGTCATCGAATAGAAAAATGCTTCATTTTGAAAGAACGAATCTTGAAGCTCGCTCGAGAAAAGAAGATTGAGCTGGATCTTGATAAAGTTGCCCAAACAAATCATGCTGCGATAATCCGAAGTTCTGGCAGCAGTCGTCCACAATCTCATTTCATGACGACGAAGTGGTTTGGCTCCAATTTAGGACCCTCGAACCTATGGCCATTTCATCCCAACATACGACTCATAGGAAGAACTCCCAAGAAAAAGACGAATTTACAGAAGACGGAGAAGGAGAATGGACTCTTGTAA

mRNA sequence

ATGATCACGAACACGATCAAAGCGCAATACGGCGAACCTTCTCAAAGCTCCCTCTTGTATTCTAAACCATATACTAAGAGGATTAATGATTTGAGAATGCCTGCTGGATACCAACCTCCAAAGTTCCAGCATTTCGATGGAAAGGGCAATCCCAAGCAACATATTGCTCACTTCATTAAAACTTATGAGAATGCTGGCACAAGAGGCGATCAACTAGTCAAGCAGTTCGTCCGAATGTTGAAGGGAAACGCCTTTGACTGCACAAGGAGAACCGTCAGTATGATGGAGCTCACCAGTTGCAAACAAAGAAAAGGTGAACCGGTTGTCGAATATATGAACTGGTGGAGAGCTCTAAGTCTTGATTGCAAGGACAAACTCACGAAAGTATTTGCTGTAGAAATATGCACCCAAGGCATGAACTGGGGACTTCTTTATATCCTTCAAAGGATAAAACCCCGCACATTCGAAGAACTAGCAACTCGCGCTCAGAACATGGAAAGAAGTATTGCTAGTAAAGGTAATAAAGAGTCTCTAGTCTCAGATGTGAAGAAAAAGAAGAAGGAAATGAAGAGCATAGAGAAGATCTCCAAGGGTTCTACGAAGGAATCTATGGTCATTAACACGACCCCTCTCAAATTTTCCTCGAAAGGAAAAGAAAAAGAAAAGAAGATAAAAAAGCGACAAGATGGAAACGTAAGACGCCGCCTTTCTCTAGAAGGAAGACAAGAAAATGTTTATCCTTTTCCAAATTCTAACTTTGCAGATATGTTAGAGCAACTACTGGAAAAGGGACTCATAGAACTCCCTGAATGCAAACGACCGGAACAGATGGGGAAAACAAATGATCCCAACTATTGTGTATATCATCGAGTCGTTAGTCATCGAATAGAAAAATGCTTCATTTTGAAAGAACGAATCTTGAAGCTCGCTCGAGAAAAGAAGATTGAGCTGGATCTTGATAAAGTTGCCCAAACAAATCATGCTGCGATAATCCGAAGTTCTGGCAGCAGTCGTCCACAATCTCATTTCATGACGACGAAGTGGTTTGGCTCCAATTTAGGACCCTCGAACCTATGGCCATTTCATCCCAACATACGACTCATAGGAAGAACTCCCAAGAAAAAGACGAATTTACAGAAGACGGAGAAGGAGAATGGACTCTTGTAA

Coding sequence (CDS)

ATGATCACGAACACGATCAAAGCGCAATACGGCGAACCTTCTCAAAGCTCCCTCTTGTATTCTAAACCATATACTAAGAGGATTAATGATTTGAGAATGCCTGCTGGATACCAACCTCCAAAGTTCCAGCATTTCGATGGAAAGGGCAATCCCAAGCAACATATTGCTCACTTCATTAAAACTTATGAGAATGCTGGCACAAGAGGCGATCAACTAGTCAAGCAGTTCGTCCGAATGTTGAAGGGAAACGCCTTTGACTGCACAAGGAGAACCGTCAGTATGATGGAGCTCACCAGTTGCAAACAAAGAAAAGGTGAACCGGTTGTCGAATATATGAACTGGTGGAGAGCTCTAAGTCTTGATTGCAAGGACAAACTCACGAAAGTATTTGCTGTAGAAATATGCACCCAAGGCATGAACTGGGGACTTCTTTATATCCTTCAAAGGATAAAACCCCGCACATTCGAAGAACTAGCAACTCGCGCTCAGAACATGGAAAGAAGTATTGCTAGTAAAGGTAATAAAGAGTCTCTAGTCTCAGATGTGAAGAAAAAGAAGAAGGAAATGAAGAGCATAGAGAAGATCTCCAAGGGTTCTACGAAGGAATCTATGGTCATTAACACGACCCCTCTCAAATTTTCCTCGAAAGGAAAAGAAAAAGAAAAGAAGATAAAAAAGCGACAAGATGGAAACGTAAGACGCCGCCTTTCTCTAGAAGGAAGACAAGAAAATGTTTATCCTTTTCCAAATTCTAACTTTGCAGATATGTTAGAGCAACTACTGGAAAAGGGACTCATAGAACTCCCTGAATGCAAACGACCGGAACAGATGGGGAAAACAAATGATCCCAACTATTGTGTATATCATCGAGTCGTTAGTCATCGAATAGAAAAATGCTTCATTTTGAAAGAACGAATCTTGAAGCTCGCTCGAGAAAAGAAGATTGAGCTGGATCTTGATAAAGTTGCCCAAACAAATCATGCTGCGATAATCCGAAGTTCTGGCAGCAGTCGTCCACAATCTCATTTCATGACGACGAAGTGGTTTGGCTCCAATTTAGGACCCTCGAACCTATGGCCATTTCATCCCAACATACGACTCATAGGAAGAACTCCCAAGAAAAAGACGAATTTACAGAAGACGGAGAAGGAGAATGGACTCTTGTAA

Protein sequence

MITNTIKAQYGEPSQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHFIKTYENAGTRGDQLVKQFVRMLKGNAFDCTRRTVSMMELTSCKQRKGEPVVEYMNWWRALSLDCKDKLTKVFAVEICTQGMNWGLLYILQRIKPRTFEELATRAQNMERSIASKGNKESLVSDVKKKKKEMKSIEKISKGSTKESMVINTTPLKFSSKGKEKEKKIKKRQDGNVRRRLSLEGRQENVYPFPNSNFADMLEQLLEKGLIELPECKRPEQMGKTNDPNYCVYHRVVSHRIEKCFILKERILKLAREKKIELDLDKVAQTNHAAIIRSSGSSRPQSHFMTTKWFGSNLGPSNLWPFHPNIRLIGRTPKKKTNLQKTEKENGLL

Homology

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BLAST of Moc04g10150 vs. NCBI nr
Match: XP_031742199.1 (uncharacterized protein LOC105435721 [Cucumis sativus])

HSP 1 Score: 487.3 bits (1253), Expect = 1.3e-133
Identity = 249/363 (68.60%), Postives = 296/363 (81.54%), Query Frame = 0


Query: 1   MITNTIKAQYGEPSQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHFIK 60
           MITN+I+AQYG PSQ+S +YSKPYTKRI++LRMP GYQPPKFQ FDGKGNPKQH+AHF++
Sbjct: 170 MITNSIRAQYGGPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHVAHFVE 229

Query: 61  TYENAGTRGDQLVKQFVRMLKGNAFD-------------------------CTRRTVSMM 120
           T ENAG+RGDQLV+QFVR LKGNAF+                          TRRTVSMM
Sbjct: 230 TCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTRRTVSMM 289

Query: 121 ELTSCKQRKGEPVVEYMNWWRALSLDCKDKLTKVFAVEICTQGMNWGLLYILQRIKPRTF 180
           ELT+ KQRKGEPV++Y+N WRALSLDCKD+LT++ AVE+CTQGM+WGLLYILQ IKPRTF
Sbjct: 290 ELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTF 349

Query: 181 EELATRAQNMERSIASKGNKESLVSDVKKKKKEMKSIEKISKGSTKESMVINTTPLKFSS 240
           EELATRA +ME SIAS+G K+ LV +VKK KKEMK  EKI K ++KESMV+NTTPLKFS 
Sbjct: 350 EELATRAHDMELSIASRGTKDFLVPEVKKDKKEMKGAEKIVKSTSKESMVVNTTPLKFS- 409

Query: 241 KGKEKEKKIKKRQDGNVRRRLSLEGRQENVYPFPNSNFADMLEQLLEKGLIELPECKRPE 300
             K KE +++K+ DG+ RRRL+L+ RQE VYPFP+S+ ADMLEQLLEK LI+LPECKRPE
Sbjct: 410 --KGKEARVEKKDDGSERRRLTLKERQEKVYPFPDSDIADMLEQLLEKQLIQLPECKRPE 469

Query: 301 QMGKTNDPNYCVYHRVVSHRIEKCFILKERILKLAREKKIELDLDKVAQTNHAAI-IRSS 338
           Q GK +DPNYC YHRV+SH +EKCF+LKE IL+LAREK+IELDL++VAQTNHA + I S 
Sbjct: 470 QAGKVDDPNYCKYHRVISHPVEKCFVLKELILRLAREKRIELDLEEVAQTNHAEVTIMSE 529

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BLAST of Moc04g10150 vs. NCBI nr
Match: XP_031735972.1 (uncharacterized protein LOC116401693 [Cucumis sativus])

HSP 1 Score: 487.3 bits (1253), Expect = 1.3e-133
Identity = 249/363 (68.60%), Postives = 296/363 (81.54%), Query Frame = 0


Query: 1   MITNTIKAQYGEPSQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHFIK 60
           MITN+I+AQYG PSQ+S +YSKPYTKRI++LRMP GYQPPKFQ FDGKGNPKQH+AHF++
Sbjct: 170 MITNSIRAQYGGPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHVAHFVE 229

Query: 61  TYENAGTRGDQLVKQFVRMLKGNAFD-------------------------CTRRTVSMM 120
           T ENAG+RGDQLV+QFVR LKGNAF+                          TRRTVSMM
Sbjct: 230 TCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTRRTVSMM 289

Query: 121 ELTSCKQRKGEPVVEYMNWWRALSLDCKDKLTKVFAVEICTQGMNWGLLYILQRIKPRTF 180
           ELT+ KQRKGEPV++Y+N WRALSLDCKD+LT++ AVE+CTQGM+WGLLYILQ IKPRTF
Sbjct: 290 ELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTF 349

Query: 181 EELATRAQNMERSIASKGNKESLVSDVKKKKKEMKSIEKISKGSTKESMVINTTPLKFSS 240
           EELATRA +ME SIAS+G K+ LV +VKK KKEMK  EKI K ++KESMV+NTTPLKFS 
Sbjct: 350 EELATRAHDMELSIASRGTKDFLVPEVKKDKKEMKGAEKIVKSTSKESMVVNTTPLKFS- 409

Query: 241 KGKEKEKKIKKRQDGNVRRRLSLEGRQENVYPFPNSNFADMLEQLLEKGLIELPECKRPE 300
             K KE +++K+ DG+ RRRL+L+ RQE VYPFP+S+ ADMLEQLLEK LI+LPECKRPE
Sbjct: 410 --KGKEARVEKKDDGSERRRLTLKERQEKVYPFPDSDIADMLEQLLEKQLIQLPECKRPE 469

Query: 301 QMGKTNDPNYCVYHRVVSHRIEKCFILKERILKLAREKKIELDLDKVAQTNHAAI-IRSS 338
           Q GK +DPNYC YHRV+SH +EKCF+LKE IL+LAREK+IELDL++VAQTNHA + I S 
Sbjct: 470 QAGKVDDPNYCKYHRVISHPVEKCFVLKELILRLAREKRIELDLEEVAQTNHAEVTIMSE 529

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BLAST of Moc04g10150 vs. NCBI nr
Match: XP_031740568.1 (uncharacterized protein LOC116403508 [Cucumis sativus])

HSP 1 Score: 485.3 bits (1248), Expect = 4.8e-133
Identity = 248/363 (68.32%), Postives = 296/363 (81.54%), Query Frame = 0


Query: 1   MITNTIKAQYGEPSQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHFIK 60
           MIT++I+AQYG PSQ+S +YSKPYTKRI++LRMP GYQPPKFQ FDGKGNPKQH+AHF++
Sbjct: 170 MITSSIRAQYGGPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHVAHFVE 229

Query: 61  TYENAGTRGDQLVKQFVRMLKGNAFD-------------------------CTRRTVSMM 120
           T ENAG+RGDQLV+QFVR LKGNAF+                          TRRTVSMM
Sbjct: 230 TCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTRRTVSMM 289

Query: 121 ELTSCKQRKGEPVVEYMNWWRALSLDCKDKLTKVFAVEICTQGMNWGLLYILQRIKPRTF 180
           ELT+ KQRKGEPV++Y+N WRALSLDCKD+LT++ AVE+CTQGM+WGLLYILQ IKPRTF
Sbjct: 290 ELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTF 349

Query: 181 EELATRAQNMERSIASKGNKESLVSDVKKKKKEMKSIEKISKGSTKESMVINTTPLKFSS 240
           EELATRA +ME SIAS+G K+ LV +VKK KKEMK  EKI K ++KESMV+NTTPLKFS 
Sbjct: 350 EELATRAHDMELSIASRGTKDFLVPEVKKDKKEMKGAEKIVKSTSKESMVVNTTPLKFS- 409

Query: 241 KGKEKEKKIKKRQDGNVRRRLSLEGRQENVYPFPNSNFADMLEQLLEKGLIELPECKRPE 300
             K KE +++K+ DG+ RRRL+L+ RQE VYPFP+S+ ADMLEQLLEK LI+LPECKRPE
Sbjct: 410 --KGKEARVEKKDDGSERRRLTLKERQEKVYPFPDSDIADMLEQLLEKQLIQLPECKRPE 469

Query: 301 QMGKTNDPNYCVYHRVVSHRIEKCFILKERILKLAREKKIELDLDKVAQTNHAAI-IRSS 338
           Q GK +DPNYC YHRV+SH +EKCF+LKE IL+LAREK+IELDL++VAQTNHA + I S 
Sbjct: 470 QAGKVDDPNYCKYHRVISHPVEKCFVLKELILRLAREKRIELDLEEVAQTNHAEVTIMSE 529

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BLAST of Moc04g10150 vs. NCBI nr
Match: XP_031739134.1 (uncharacterized protein LOC116402863 [Cucumis sativus])

HSP 1 Score: 485.0 bits (1247), Expect = 6.2e-133
Identity = 248/363 (68.32%), Postives = 295/363 (81.27%), Query Frame = 0


Query: 1   MITNTIKAQYGEPSQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHFIK 60
           MIT++I+AQYG PSQ+S +YSKPYTKRI++LRMP GYQPPKFQ FDGKGNPKQH+AHF++
Sbjct: 170 MITSSIRAQYGGPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHVAHFVE 229

Query: 61  TYENAGTRGDQLVKQFVRMLKGNAFD-------------------------CTRRTVSMM 120
           T ENAG+RGDQLV+QFVR LKGNAF+                          TRRTVSMM
Sbjct: 230 TCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTRRTVSMM 289

Query: 121 ELTSCKQRKGEPVVEYMNWWRALSLDCKDKLTKVFAVEICTQGMNWGLLYILQRIKPRTF 180
           ELT+ KQRKGEPV++Y+N WRALSLDCKD+LT++ AVE+CTQGM+WGLLYILQ IKPRTF
Sbjct: 290 ELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTF 349

Query: 181 EELATRAQNMERSIASKGNKESLVSDVKKKKKEMKSIEKISKGSTKESMVINTTPLKFSS 240
           EELATRA +ME SIAS+G K+ LV +VKK KKEMK  EKI K + KESMV+NTTPLKFS 
Sbjct: 350 EELATRAHDMELSIASRGTKDFLVPEVKKDKKEMKGAEKIVKSTAKESMVVNTTPLKFS- 409

Query: 241 KGKEKEKKIKKRQDGNVRRRLSLEGRQENVYPFPNSNFADMLEQLLEKGLIELPECKRPE 300
             K KE +++K+ DG+ RRRL+L+ RQE VYPFP+S+ ADMLEQLLEK LI+LPECKRPE
Sbjct: 410 --KGKEARVEKKDDGSERRRLTLKERQEKVYPFPDSDIADMLEQLLEKQLIQLPECKRPE 469

Query: 301 QMGKTNDPNYCVYHRVVSHRIEKCFILKERILKLAREKKIELDLDKVAQTNHAAI-IRSS 338
           Q GK +DPNYC YHRV+SH +EKCF+LKE IL+LAREK+IELDL++VAQTNHA + I S 
Sbjct: 470 QAGKVDDPNYCKYHRVISHPVEKCFVLKELILRLAREKRIELDLEEVAQTNHAEVTIMSE 529

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BLAST of Moc04g10150 vs. NCBI nr
Match: XP_031742032.1 (uncharacterized protein LOC116404025 [Cucumis sativus])

HSP 1 Score: 484.6 bits (1246), Expect = 8.2e-133
Identity = 248/363 (68.32%), Postives = 295/363 (81.27%), Query Frame = 0


Query: 1   MITNTIKAQYGEPSQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHFIK 60
           MIT++I+AQYG PSQ+S +YSKPYTKRI++LRMP GYQPPKFQ FDGKGNPKQH+AHF++
Sbjct: 170 MITSSIRAQYGGPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHVAHFVE 229

Query: 61  TYENAGTRGDQLVKQFVRMLKGNAFD-------------------------CTRRTVSMM 120
           T ENAG+RGDQLV+QFVR LKGNAF+                          TRRTVSMM
Sbjct: 230 TCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTRRTVSMM 289

Query: 121 ELTSCKQRKGEPVVEYMNWWRALSLDCKDKLTKVFAVEICTQGMNWGLLYILQRIKPRTF 180
           ELT+ KQRKGEPV++Y+N WRALSLDCKD+LT++ AVE+CTQGM+WGLLYILQ IKPRTF
Sbjct: 290 ELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTF 349

Query: 181 EELATRAQNMERSIASKGNKESLVSDVKKKKKEMKSIEKISKGSTKESMVINTTPLKFSS 240
           EELATRA +ME SIAS+G K+ LV +VKK KKEMK  EKI K + KESMV+NTTPLKFS 
Sbjct: 350 EELATRAHDMELSIASRGTKDFLVPEVKKDKKEMKGAEKIVKSTLKESMVVNTTPLKFS- 409

Query: 241 KGKEKEKKIKKRQDGNVRRRLSLEGRQENVYPFPNSNFADMLEQLLEKGLIELPECKRPE 300
             K KE +++K+ DG+ RRRL+L+ RQE VYPFP+S+ ADMLEQLLEK LI+LPECKRPE
Sbjct: 410 --KGKEARVEKKDDGSERRRLTLKERQEKVYPFPDSDIADMLEQLLEKQLIQLPECKRPE 469

Query: 301 QMGKTNDPNYCVYHRVVSHRIEKCFILKERILKLAREKKIELDLDKVAQTNHAAI-IRSS 338
           Q GK +DPNYC YHRV+SH +EKCF+LKE IL+LAREK+IELDL++VAQTNHA + I S 
Sbjct: 470 QAGKVDDPNYCKYHRVISHPVEKCFVLKELILRLAREKRIELDLEEVAQTNHAEVTIMSE 529

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BLAST of Moc04g10150 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 5.5e-127
Identity = 238/361 (65.93%), Postives = 285/361 (78.95%), Query Frame = 0


Query: 1   MITNTIKAQYGEPSQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHFIK 60
           MI N+IK QYG P+Q+  LYSKPYTKRI+++RMP GYQPPKFQ FDGKGNPKQH+AHFI+
Sbjct: 170 MIANSIKTQYGGPAQTFSLYSKPYTKRIDNMRMPHGYQPPKFQQFDGKGNPKQHVAHFIE 229

Query: 61  TYENAGTRGDQLVKQFVRMLKGNAFD-------------------------CTRRTVSMM 120
           T E AGTRGD LVKQFVR LKGNAFD                          TRR VSM+
Sbjct: 230 TCETAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEQLERDFLNRFYSTRRIVSMI 289

Query: 121 ELTSCKQRKGEPVVEYMNWWRALSLDCKDKLTKVFAVEICTQGMNWGLLYILQRIKPRTF 180
           ELT+ KQRKGEPV++Y+N WRALSLDCKD+LT++ AVE+CTQGM+WGLLYILQ IKPRTF
Sbjct: 290 ELTATKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTF 349

Query: 181 EELATRAQNMERSIASKGNKESLVSDVKKKKKEMKSIEKISKGSTKESMVINTTPLKFSS 240
           EELATRA +ME SIA++GN + LV +V+K+KKE+KS +K  KG TKE+MV++TTPLK  S
Sbjct: 350 EELATRAHDMELSIANRGNNDLLVPEVRKEKKEVKSTQKALKGVTKEAMVVSTTPLKLVS 409

Query: 241 KGKEKEKKIKKRQDGNVRRRLSLEGRQENVYPFPNSNFADMLEQLLEKGLIELPECKRPE 300
               KEKK++KRQD   +RR +L+ RQE VYPFP+S+  DML+QLLEK LI+LPECKRP 
Sbjct: 410 ----KEKKMEKRQDEGEKRRPTLKERQEKVYPFPDSDLPDMLDQLLEKQLIQLPECKRPA 469

Query: 301 QMGKTNDPNYCVYHRVVSHRIEKCFILKERILKLAREKKIELDLDKVAQTNHAAIIRSSG 337
           +MG+ NDPNYC YHRV+SH +EKCF+LKE ILKLA +KKIEL+LD VAQTNHAA+I  S 
Sbjct: 470 EMGRVNDPNYCKYHRVISHPVEKCFVLKELILKLALDKKIELELDDVAQTNHAAVIIQSD 526

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BLAST of Moc04g10150 vs. ExPASy TrEMBL
Match: A0A5A7VE63 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00390 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 5.2e-125
Identity = 233/361 (64.54%), Postives = 284/361 (78.67%), Query Frame = 0


Query: 1   MITNTIKAQYGEPSQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHFIK 60
           MI N+IK QYG P+Q+  LYSKPYTKRI+++RMP GYQ PKFQ FDGKGNPKQH+AHFI+
Sbjct: 23  MIANSIKTQYGGPAQTFSLYSKPYTKRIDNMRMPHGYQTPKFQQFDGKGNPKQHVAHFIE 82

Query: 61  TYENAGTRGDQLVKQFVRMLKGNAFD-------------------------CTRRTVSMM 120
           T E AGTRGD LVKQFV+ LKGNAFD                          TRR VSM+
Sbjct: 83  TCETAGTRGDLLVKQFVQTLKGNAFDWYTDLEPESIDSWEQLERDFLNRFYSTRRIVSMI 142

Query: 121 ELTSCKQRKGEPVVEYMNWWRALSLDCKDKLTKVFAVEICTQGMNWGLLYILQRIKPRTF 180
           ELT+ KQRKGEPV++Y+N WRALSLDCKD+LT++ AVE+CTQGM+WGLLYILQ IKPRTF
Sbjct: 143 ELTATKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTF 202

Query: 181 EELATRAQNMERSIASKGNKESLVSDVKKKKKEMKSIEKISKGSTKESMVINTTPLKFSS 240
           EELATRA +ME SIA++GN + LV +V+K+KKE+KS +K+ KG+TKE+MV++TTPLK  S
Sbjct: 203 EELATRAHDMELSIANRGNNDLLVPEVRKEKKEVKSTQKVLKGATKEAMVVSTTPLKLVS 262

Query: 241 KGKEKEKKIKKRQDGNVRRRLSLEGRQENVYPFPNSNFADMLEQLLEKGLIELPECKRPE 300
               KEKK++K QD   +RR +L+ RQE VYPFP+S+  DML+QLLEK LI+LPECKRP 
Sbjct: 263 ----KEKKMEKHQDEGEKRRPTLKERQEKVYPFPDSDLPDMLDQLLEKQLIQLPECKRPA 322

Query: 301 QMGKTNDPNYCVYHRVVSHRIEKCFILKERILKLAREKKIELDLDKVAQTNHAAIIRSSG 337
           +MG+ NDPNYC YHRV+SH +EKCF+LKE ILKLA +KKIEL++D VAQ NHAA+I  S 
Sbjct: 323 EMGRVNDPNYCKYHRVISHPVEKCFVLKELILKLALDKKIELEIDDVAQANHAAVIIQSD 379

[Close]

BLAST of Moc04g10150 vs. ExPASy TrEMBL
Match: A0A5A7TJ44 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G002330 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 1.5e-124
Identity = 233/361 (64.54%), Postives = 282/361 (78.12%), Query Frame = 0


Query: 1   MITNTIKAQYGEPSQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHFIK 60
           MI N+IK QYG P+Q+  LYSKPYTKRI+++RMP GYQPPKFQ FDGKGNPKQH+AHFI+
Sbjct: 23  MIANSIKTQYGGPAQTFSLYSKPYTKRIDNMRMPHGYQPPKFQQFDGKGNPKQHVAHFIE 82

Query: 61  TYENAGTRGDQLVKQFVRMLKGNAFD-------------------------CTRRTVSMM 120
           T E AGTRGD LVKQFVR LKGNAFD                           RR VSM+
Sbjct: 83  TCETAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEQLERDFLNRFYSIRRIVSMI 142

Query: 121 ELTSCKQRKGEPVVEYMNWWRALSLDCKDKLTKVFAVEICTQGMNWGLLYILQRIKPRTF 180
           ELT+ KQRKGEPV++Y+N WRALSLDCKD+LT++ AVE+ TQGM+WGL+YILQ IKP TF
Sbjct: 143 ELTATKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMYTQGMHWGLMYILQGIKPCTF 202

Query: 181 EELATRAQNMERSIASKGNKESLVSDVKKKKKEMKSIEKISKGSTKESMVINTTPLKFSS 240
           EEL TRA +ME SIA++GN + LVS+V+K+KKE+KS +K+ KG+TKE+MV++TTPLK  S
Sbjct: 203 EELETRAHDMELSIANRGNNDLLVSEVRKEKKEVKSTQKVLKGATKEAMVVSTTPLKLVS 262

Query: 241 KGKEKEKKIKKRQDGNVRRRLSLEGRQENVYPFPNSNFADMLEQLLEKGLIELPECKRPE 300
               KEKKI+KRQD   +R  +L  RQE +YPFPNS+  DML+QLLEK L++LPECKRP 
Sbjct: 263 ----KEKKIEKRQDEGEKRHPTLNERQEKIYPFPNSDLPDMLDQLLEKQLVQLPECKRPV 322

Query: 301 QMGKTNDPNYCVYHRVVSHRIEKCFILKERILKLAREKKIELDLDKVAQTNHAAIIRSSG 337
           +MG+ NDPNYC YHRV+SH +EKCF+LKE ILKLA +KKIEL+LD VAQTNHAA+I  S 
Sbjct: 323 EMGRVNDPNYCKYHRVISHPVEKCFVLKELILKLALDKKIELELDDVAQTNHAAVIIQSD 379

[Close]

BLAST of Moc04g10150 vs. ExPASy TrEMBL
Match: A0A6J1DYQ8 (uncharacterized protein LOC111025834 OS=Momordica charantia OX=3673 GN=LOC111025834 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 8.2e-123
Identity = 244/368 (66.30%), Postives = 281/368 (76.36%), Query Frame = 0


Query: 1   MITNTIKAQYGEPSQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHFIK 60
           MITNTI+AQYG  SQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHF++
Sbjct: 1   MITNTIRAQYGGSSQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHFVE 60

Query: 61  TYENAGTRGDQLVKQFVRMLKGNAFD-------------------------CTRRTVSMM 120
           T ENAGTRGDQLVKQFVR LKGNAFD                          T+RTVSMM
Sbjct: 61  TCENAGTRGDQLVKQFVRTLKGNAFDWYTDLEPETIESWEQLEKEFLNRFYSTKRTVSMM 120

Query: 121 ELTSCKQRKGEPVVEYMNWWRALSLDCKDKLTKVFAVEICTQGMNWGLLYILQRIKPRTF 180
           ELT+ +QRKGEPVVEY+N WRALSLDCKD+LT++ AVE+CTQGM+W LLYILQRIKPRTF
Sbjct: 121 ELTNSEQRKGEPVVEYINRWRALSLDCKDRLTELSAVELCTQGMHWELLYILQRIKPRTF 180

Query: 181 EELATRAQNMERSIASKGNKESLVSDVKKKKKEMKSIEKISKGSTKESMVINTTPLKFSS 240
           EELATRA +ME SIA++G+K+SLV D+   +KE KS+EK S     E   +NT   K  S
Sbjct: 181 EELATRAHDMELSIANRGSKDSLVLDL---EKESKSVEKTS----NEFFGVNTISPKLFS 240

Query: 241 KGKEKEKKIKKRQDGNVRRRLSLEGRQENVYPFPNSNFADMLEQLLEKGLIELPECKRPE 300
             K K K+I+K Q GN +  LSL+ RQE VYPFPNS+   MLEQLLE  LI LPEC RPE
Sbjct: 241 --KIKGKRIEK-QKGNRKIWLSLKERQEKVYPFPNSDIPYMLEQLLETRLIVLPECIRPE 300

Query: 301 QMGKTNDPNYCVYHRVVSHRIEKCFILKERILKLAREKKIELDLDKVAQTNHAAIIRSSG 344
           +M K +DP YC YHRV+SH +EKCF+LKERIL LARE KIELD +++AQ+NHAA+  + G
Sbjct: 301 EMSKVDDPKYCKYHRVISHPVEKCFVLKERILNLAREGKIELDFNEIAQSNHAAVTTNIG 358

[Close]

BLAST of Moc04g10150 vs. ExPASy TrEMBL
Match: A0A5A7SRE2 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G00210 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 9.1e-122
Identity = 224/334 (67.07%), Postives = 272/334 (81.44%), Query Frame = 0


Query: 1   MITNTIKAQYGEPSQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHFIK 60
           MI N+I+AQYG P Q+S +YSKPYTKRI++LRMP GYQP KFQ FDGKGNPKQHI HF++
Sbjct: 170 MIANSIRAQYGGPPQTSFMYSKPYTKRIDNLRMPLGYQPLKFQQFDGKGNPKQHIVHFVE 229

Query: 61  TYENAGTRGDQLVKQFVRMLKGNAFDCTRRTVSMMELTSCKQRKGEPVVEYMNWWRALSL 120
           T ENAG+RGDQLV+QFVR LKGNAF+CTRR VSMMELT+  QRKGEPV++Y+N WRALSL
Sbjct: 230 TCENAGSRGDQLVRQFVRSLKGNAFECTRRVVSMMELTN-TQRKGEPVIDYINRWRALSL 289

Query: 121 DCKDKLTKVFAVEICTQGMNWGLLYILQRIKPRTFEELATRAQNMERSIASKGNKESLVS 180
           DCKDKLT++ AVE+CTQGM+W LLYILQ IKPRTFEELATRA +M+ SIA++G K+ LV 
Sbjct: 290 DCKDKLTELSAVEMCTQGMHWELLYILQGIKPRTFEELATRAHDMKLSIANRGVKDFLVQ 349

Query: 181 DVKKKKKEMKSIEKISKGSTKESMVINTTPLKFSSKGKEKEKKIKKRQDGNVRRRLSLEG 240
             +  K E+   +KI+     ESM++  TPLK  S  K KE K K+  DG+ +RR +L  
Sbjct: 350 RTRSDKNEINDTKKIANNVLNESMLVQETPLK--SFSKRKETKHKRNHDGDEKRRPTLRE 409

Query: 241 RQENVYPFPNSNFADMLEQLLEKGLIELPECKRPEQMGKTNDPNYCVYHRVVSHRIEKCF 300
           RQ+ VYPFP+S+ ADMLEQL+EK LI+LPECKRPEQ+GK +DPNYC YHRV+SH +EKCF
Sbjct: 410 RQKKVYPFPDSDVADMLEQLIEKQLIQLPECKRPEQVGKVDDPNYCKYHRVISHLVEKCF 469

Query: 301 ILKERILKLAREKKIELDLDKVAQTNHAAIIRSS 335
           +LKE I KLARE KIELD+D+VAQTNH A+  +S
Sbjct: 470 VLKELIRKLARENKIELDIDEVAQTNHVAVNMTS 500

The following BLAST results are available for this feature:

BLAST of Moc04g10150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031742199.1	1.3e-133	68.60	uncharacterized protein LOC105435721 [Cucumis sativus]	[more]
XP_031735972.1	1.3e-133	68.60	uncharacterized protein LOC116401693 [Cucumis sativus]	[more]
XP_031740568.1	4.8e-133	68.32	uncharacterized protein LOC116403508 [Cucumis sativus]	[more]
XP_031739134.1	6.2e-133	68.32	uncharacterized protein LOC116402863 [Cucumis sativus]	[more]
XP_031742032.1	8.2e-133	68.32	uncharacterized protein LOC116404025 [Cucumis sativus]	[more]

BLAST of Moc04g10150 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc04g10150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZU9	5.5e-127	65.93	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940...	[more]
A0A5A7VE63	5.2e-125	64.54	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TJ44	1.5e-124	64.54	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G00233...	[more]
A0A6J1DYQ8	8.2e-123	66.30	uncharacterized protein LOC111025834 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A5A7SRE2	9.1e-122	67.07	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Moc04g10150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33437	OS06G0361200 PROTEIN	coord: 85..351

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g10150.1	Moc04g10150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity