Moc04g10090 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc04g10090
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr4: 7487759 .. 7490368 (+)
RNA-Seq ExpressionMoc04g10090
SyntenyMoc04g10090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCTTACTGTCGCTGCATCGACCACCACATCCTTTACAGATCATGTCGTTTCAGATGGAAATGATAGAGGAAGGGGGAGAAATGGAGAAGGGAAGAGGGTCGGTGTAGCAAGCGTCTAAGACAACAGGGAAGCGTGGCAGTGGAACCTATGGAGGAGGAGAAGGGAGGAGAGAGAAAGAAGAGAATAATAAAGAGAAAAAAAAACAATGTCATTAGATAAAACATCAAAAGTTGACATATCATTTTAAAATTTCAGGAACGAAAATAGACACCTAACTCACGTGTAGGGAGAAAAAATGTATTTTGCCATTATTTGAACTAAGAGGGGATTAAGGTTAATTGGATAAAAAAATAAGGGTTGACAAGTTAAGGAAAAAAGAAACCCCCTAATGGGAGGGAAATTTGAATGTGTGACCCCTCCAATAACTGAAACTGGATAAATGATCCCATTTTTAAAAAACCTAATTTGTGACCCCATATTCTATTAATTAGGACCCCTTTCAAAATATGACATAATGAAATTACCATTGTACCCCTATTTTAAAAAAATTCATCCCCCCCTCCCCATCCTTCGTCTCGGACGTTTCGTGGCACTCCCATCCCATCCCAAGTAAAACCCTAAACCCCCATCTCGGAGAATCCCCGTCTCGGAGAATCCATTTCGCACTCATCCATTTTTTCTGAAAATCATTCTTTCGCACTCATCTGTAAGCGTCTGATTCATCTCGGAGGCTGCAAGGTTAGTTTATATCTTTTACAATGTAAGAAAGGTGCTGTTCTTTGTTGTATTAGCATGACCGGCGCTATCTGAAGCGACCGTATAGATTTAGGTTTAGTTTGACGTTGTCATTGTAAGAGAAAAAAAAATCCCTCGAAGGCTTCAATCTCGGACTCTATCTCGTATTCAATCCCGGACCTCAGTGGTCCGGGATTGAATATTGCTCGCATCCAAGATTGAAGCCTTCGAGGTCCGGGACTGACTCTCATCTCGGACTTGTCCCGGTCCGGTTCGGTCCGGGATGAAGGTCGATCCCGGACACGTCGCGGTCCTGTTCGGATTCGAGATGAGATGCAGATTGAATCCAAGATTTAATCTGCCTCTCATCTCTGACCCGAACAGGACCAGGACGTGTTCGGGATCGACCTTCATCTCGGACCGAACAGGACCGGGACAAGTCCAAGATGAAAGGCAGAATGAGACAACTCAAATCTGACTCTCATCTCGGACTTGTCCCGGGAGGAGTCCGAGATGAGAGGCAGATTTGAGTTGTCCCATTCTGCCTTTCATCTCGGACTTGTCCCGGTCCGGTTCGGTCCGGGATGAAAGGCAGAATGCTGTTTTGTTTAGTTTTTTTTTTTAAGTTCCTTTGTCACTTTAGCTTAGTCTGTATCTAATATGTTTTATTTCAACTTTGTTATGAACCTAGAATGGATTTGAGACTCATCATAGATCGTAATGACTGGTTTCCGGCCACGTTGATGAACCTTGGCCATGTTGATAAAACCAGTACTAGGATTAAGGTCAGGCTAACCCCAACCTAGTTAGACATGTTTAGGCAAACATGTTTCGGTCCTATTTTGGACATGGACGTTGTTTTCAACGGTCCATTGATCCATCACCTGTTGTTGAGAGAGGTTGAAGAGCCTAGACAGGACGTCATTAGCTTGACGAACTCGGTCGGCGTAGGTTGAAGATCCATCACCAACTGGCCGGGGGCTACGCAAGCGCCATTATTCGTGGAAACTGAAGGGTATATACACACCAACCGGCCGACGTAGGATCACCGTGGATGCATATGACCCAGCATGTCCCATTCCTCCACAGCTGGACGGTCGGTTCCAGACATGGATGGATGACCCAGACACCGATGGACGAACTCGGTCTACTGCAGCTGGCTTACAAGGGAAGGAATGGTATCGCGATCTACTAGACCCTACTGTCCAATTGAAGGACGAGGTAAGTACCTCTTATTCCACTATCTAGTACTACATTTGTCAATAATATTCCAATATCAACTTGTATTTCTTAAATGCAATAGGTAGTCGATGCTCTCGTCCTATTTACGGCCAAAAAGTTGGAGAAGTGTGTACATCTGTGTTGCAAAAAGTTTGCGATAGGCGACGTGCTACTTTCGGTACAGACTTTTTACCAATTTGTACTAAAAAATACTATTTTAATTATCTGTGTAAGTAATATCATTTTGTACTTATTGTACAGACTCTGCTGAACCGAACAGACGGTCCGTATGTGGCCATGAAACCAGGGGTCCTGTCCACGAGAATCGAATACCCCTGGAGCCAAGAGAATACAATATTTCGGTATGTGTTCGGTAGGCAGTCGAACCAGAATGTGGCTTGGACTGAAGCAGACATTGTGCACCCCGATCAACATAGGTGGAAACCACTGGGTGATGCTCGGAATTGATCTTGTGGAAGGTGACTTAACCGTATGGGATTCACTCCACTAGATTCACTCGAGAAGGAGCTGAAGCCCATTTGTACGATCCTACCTGCGGTACTACATCATGGCGGGATATTTGCATCACGACCGGACCTGCCGGTGGTGCCATGGAGGGTGTGTCGGGTTCGCACACCCCAACAGAGTAA

mRNA sequence

ATGTCCTTACTGTCGCTGCATCGACCACCACATCCTTTACAGATCATGTCGTTTCAGATGGAAATGATAGAGGAAGGGGGAGAAATGGAGAAGGGAAGAGGAATGGATTTGAGACTCATCATAGATCGTAATGACTGGTTTCCGGCCACGTTGATGAACCTTGGCCATGTTGATAAAACCAGTACTAGGATTAAGGTTGAAGATCCATCACCAACTGGCCGGGGGCTACGCAAGCGCCATTATTCGTGGAAACTGAAGGGTATATACACACCAACCGGCCGACGTAGGATCACCGTGGATGCATATGACCCAGCATGTCCCATTCCTCCACAGCTGGACGGTCGGTTCCAGACATGGATGGATGACCCAGACACCGATGGACGAACTCGGTCTACTGCAGCTGGCTTACAAGGGAAGGAATGGTATCGCGATCTACTAGACCCTACTGTCCAATTGAAGGACGAGGTAGTCGATGCTCTCGTCCTATTTACGGCCAAAAAGTTGGAGAAGTGTGTACATCTGTGTTGCAAAAAGTTTGCGATAGGCGACGTGCTACTTTCGACTCTGCTGAACCGAACAGACGGTCCGTATGTGGCCATGAAACCAGGGGTCCTGTCCACGAGAATCGAATACCCCTGGAGCCAAGAGAATACAATATTTCGGTATGTGTTCGGTAGGCAGTCGAACCAGAATGTGGCTTGGACTGAAGCAGACATTGTGCACCCCGATCAACATAGATTCACTCGAGAAGGAGCTGAAGCCCATTTGTACGATCCTACCTGCGGTACTACATCATGGCGGGATATTTGCATCACGACCGGACCTGCCGGTGGTGCCATGGAGGGTGTGTCGGGTTCGCACACCCCAACAGAGTAA

Coding sequence (CDS)

ATGTCCTTACTGTCGCTGCATCGACCACCACATCCTTTACAGATCATGTCGTTTCAGATGGAAATGATAGAGGAAGGGGGAGAAATGGAGAAGGGAAGAGGAATGGATTTGAGACTCATCATAGATCGTAATGACTGGTTTCCGGCCACGTTGATGAACCTTGGCCATGTTGATAAAACCAGTACTAGGATTAAGGTTGAAGATCCATCACCAACTGGCCGGGGGCTACGCAAGCGCCATTATTCGTGGAAACTGAAGGGTATATACACACCAACCGGCCGACGTAGGATCACCGTGGATGCATATGACCCAGCATGTCCCATTCCTCCACAGCTGGACGGTCGGTTCCAGACATGGATGGATGACCCAGACACCGATGGACGAACTCGGTCTACTGCAGCTGGCTTACAAGGGAAGGAATGGTATCGCGATCTACTAGACCCTACTGTCCAATTGAAGGACGAGGTAGTCGATGCTCTCGTCCTATTTACGGCCAAAAAGTTGGAGAAGTGTGTACATCTGTGTTGCAAAAAGTTTGCGATAGGCGACGTGCTACTTTCGACTCTGCTGAACCGAACAGACGGTCCGTATGTGGCCATGAAACCAGGGGTCCTGTCCACGAGAATCGAATACCCCTGGAGCCAAGAGAATACAATATTTCGGTATGTGTTCGGTAGGCAGTCGAACCAGAATGTGGCTTGGACTGAAGCAGACATTGTGCACCCCGATCAACATAGATTCACTCGAGAAGGAGCTGAAGCCCATTTGTACGATCCTACCTGCGGTACTACATCATGGCGGGATATTTGCATCACGACCGGACCTGCCGGTGGTGCCATGGAGGGTGTGTCGGGTTCGCACACCCCAACAGAGTAA

Protein sequence

MSLLSLHRPPHPLQIMSFQMEMIEEGGEMEKGRGMDLRLIIDRNDWFPATLMNLGHVDKTSTRIKVEDPSPTGRGLRKRHYSWKLKGIYTPTGRRRITVDAYDPACPIPPQLDGRFQTWMDDPDTDGRTRSTAAGLQGKEWYRDLLDPTVQLKDEVVDALVLFTAKKLEKCVHLCCKKFAIGDVLLSTLLNRTDGPYVAMKPGVLSTRIEYPWSQENTIFRYVFGRQSNQNVAWTEADIVHPDQHRFTREGAEAHLYDPTCGTTSWRDICITTGPAGGAMEGVSGSHTPTE
Homology
[Close]
BLAST of Moc04g10090 vs. NCBI nr
Match: XP_022155476.1 (uncharacterized protein LOC111022607 [Momordica charantia])

HSP 1 Score: 342.4 bits (877), Expect = 3.8e-90
Identity = 164/198 (82.83%), Postives = 179/198 (90.40%), Query Frame = 0 

Query: 45  DWFPATLMNL-GHVDKTSTRIKVEDPSPTGRGLRKRHYSWKLKGIYTPTGRRRITVDAYD 104
           DW P  ++ +  ++D+  T ++    +PTGRGLRK HYSWKLKGIYTPTGRRRITVDAYD
Sbjct: 94  DWAPDAIVKVEPYLDQDETDLQ---HAPTGRGLRKHHYSWKLKGIYTPTGRRRITVDAYD 153

Query: 105 PACPIPPQLDGRFQTWMDDPDTDGRTRSTAAGLQGKEWYRDLLDPTVQLKDEVVDALVLF 164
           PACPIPPQLDG+FQTWMDD D DGRTRSTAAGLQGKEWYRDLLDPTVQLKDEVVDALVLF
Sbjct: 154 PACPIPPQLDGQFQTWMDDLDIDGRTRSTAAGLQGKEWYRDLLDPTVQLKDEVVDALVLF 213

Query: 165 TAKKLEKCVHLCCKKFAIGDVLLSTLLNRTDGPYVAMKPGVLSTRIEYPWSQENTIFRYV 224
           TAKKLEKC++LC KKFAIGDVLLSTLLNRTDGPY AMKPGVLSTRIEYP SQENTIFRYV
Sbjct: 214 TAKKLEKCIYLCRKKFAIGDVLLSTLLNRTDGPYAAMKPGVLSTRIEYPCSQENTIFRYV 273

Query: 225 FGRQSNQNVAWTEADIVH 242
           FGRQS+QNVAWT+ADIV+
Sbjct: 274 FGRQSDQNVAWTDADIVY 288

[Close]
BLAST of Moc04g10090 vs. NCBI nr
Match: XP_022158807.1 (uncharacterized protein LOC111025273 [Momordica charantia])

HSP 1 Score: 160.6 bits (405), Expect = 2.0e-35
Identity = 74/122 (60.66%), Postives = 92/122 (75.41%), Query Frame = 0 

Query: 120 MDDPDTDGRTRSTAAGLQGKEWYRDLLDPTVQLKDEVVDALVLFTAKKLEKCVHLCCKKF 179
           MDDP TD  +RST+ G++ K W+  LLDP  QL DE +D+L++ TA+K+EKC HL   +F
Sbjct: 1   MDDPSTDDNSRSTSVGIKYKSWFGLLLDPQFQLDDEYIDSLMMLTARKVEKCKHLLRVQF 60

Query: 180 AIGDVLLSTLLNRTDGPYVAMKPGVLSTRIEYPWSQENTIFRYVFGRQSNQNVAWTEADI 239
           AIGDVLLS LL RTDGPY AMKPGVL ++  Y W QE TIFRYV GRQS+ +  W+EADI
Sbjct: 61  AIGDVLLSNLLRRTDGPYAAMKPGVLPSKCTYDWRQERTIFRYVLGRQSDYDTLWSEADI 120

Query: 240 VH 242
           V+
Sbjct: 121 VY 122

[Close]
BLAST of Moc04g10090 vs. NCBI nr
Match: XP_022148308.1 (uncharacterized protein LOC111016993 [Momordica charantia])

HSP 1 Score: 73.9 bits (180), Expect = 2.5e-09
Identity = 40/119 (33.61%), Postives = 62/119 (52.10%), Query Frame = 0 

Query: 127 GRTRSTAAGLQGKEWYRDLLDPTVQLKDEVVDALVLFTAKKLEKCVHLCCKKFAIGDVLL 186
           G TR T   ++ K W+R+LL P      EVVD L +   KKLE+   LC +KF  GD++L
Sbjct: 108 GATRKTVYSIKNKAWFRNLLRPGNWCTAEVVDELFMLLRKKLEQRPDLCSRKFTTGDLVL 167

Query: 187 STLLNRTDGPYVAMK-PGVLSTRI--EYPW-SQENTIFRYVFGRQSNQNVAWTEADIVH 242
           +    R D  Y  M+    L +++  EY W  ++ +I  Y  G  ++  + W E D ++
Sbjct: 168 ANYFRRKDDJYACMQSDSSLPSKVAAEYDWDGRDESIMGYTDGTHTDYPLRWMEVDAIY 226

[Close]
BLAST of Moc04g10090 vs. NCBI nr
Match: XP_022148137.1 (uncharacterized protein LOC111016890 [Momordica charantia])

HSP 1 Score: 70.5 bits (171), Expect = 2.8e-08
Identity = 30/42 (71.43%), Postives = 36/42 (85.71%), Query Frame = 0 

Query: 200 MKPGVLSTRIEYPWSQENTIFRYVFGRQSNQNVAWTEADIVH 242
           MKP VLSTRI YPW +ENTI+RYV GRQS+ NV W++ADIV+
Sbjct: 1   MKPXVLSTRINYPWXEENTIWRYVHGRQSDHNVPWSDADIVY 42

[Close]
BLAST of Moc04g10090 vs. NCBI nr
Match: XP_022153201.1 (uncharacterized protein LOC111020757 [Momordica charantia])

HSP 1 Score: 63.9 bits (154), Expect = 2.6e-06
Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0 

Query: 35 MDLRLIIDRNDWFPATLMNLGHVDKTSTRIK 66
          MDLRLIIDRNDWFPATL NL H+DKTSTRIK
Sbjct: 1  MDLRLIIDRNDWFPATLTNLAHIDKTSTRIK 31

[Close]
BLAST of Moc04g10090 vs. ExPASy TrEMBL
Match: A0A6J1DRS0 (uncharacterized protein LOC111022607 OS=Momordica charantia OX=3673 GN=LOC111022607 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.8e-90
Identity = 164/198 (82.83%), Postives = 179/198 (90.40%), Query Frame = 0 

Query: 45  DWFPATLMNL-GHVDKTSTRIKVEDPSPTGRGLRKRHYSWKLKGIYTPTGRRRITVDAYD 104
           DW P  ++ +  ++D+  T ++    +PTGRGLRK HYSWKLKGIYTPTGRRRITVDAYD
Sbjct: 94  DWAPDAIVKVEPYLDQDETDLQ---HAPTGRGLRKHHYSWKLKGIYTPTGRRRITVDAYD 153

Query: 105 PACPIPPQLDGRFQTWMDDPDTDGRTRSTAAGLQGKEWYRDLLDPTVQLKDEVVDALVLF 164
           PACPIPPQLDG+FQTWMDD D DGRTRSTAAGLQGKEWYRDLLDPTVQLKDEVVDALVLF
Sbjct: 154 PACPIPPQLDGQFQTWMDDLDIDGRTRSTAAGLQGKEWYRDLLDPTVQLKDEVVDALVLF 213

Query: 165 TAKKLEKCVHLCCKKFAIGDVLLSTLLNRTDGPYVAMKPGVLSTRIEYPWSQENTIFRYV 224
           TAKKLEKC++LC KKFAIGDVLLSTLLNRTDGPY AMKPGVLSTRIEYP SQENTIFRYV
Sbjct: 214 TAKKLEKCIYLCRKKFAIGDVLLSTLLNRTDGPYAAMKPGVLSTRIEYPCSQENTIFRYV 273

Query: 225 FGRQSNQNVAWTEADIVH 242
           FGRQS+QNVAWT+ADIV+
Sbjct: 274 FGRQSDQNVAWTDADIVY 288

[Close]
BLAST of Moc04g10090 vs. ExPASy TrEMBL
Match: A0A6J1DY60 (uncharacterized protein LOC111025273 OS=Momordica charantia OX=3673 GN=LOC111025273 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 9.8e-36
Identity = 74/122 (60.66%), Postives = 92/122 (75.41%), Query Frame = 0 

Query: 120 MDDPDTDGRTRSTAAGLQGKEWYRDLLDPTVQLKDEVVDALVLFTAKKLEKCVHLCCKKF 179
           MDDP TD  +RST+ G++ K W+  LLDP  QL DE +D+L++ TA+K+EKC HL   +F
Sbjct: 1   MDDPSTDDNSRSTSVGIKYKSWFGLLLDPQFQLDDEYIDSLMMLTARKVEKCKHLLRVQF 60

Query: 180 AIGDVLLSTLLNRTDGPYVAMKPGVLSTRIEYPWSQENTIFRYVFGRQSNQNVAWTEADI 239
           AIGDVLLS LL RTDGPY AMKPGVL ++  Y W QE TIFRYV GRQS+ +  W+EADI
Sbjct: 61  AIGDVLLSNLLRRTDGPYAAMKPGVLPSKCTYDWRQERTIFRYVLGRQSDYDTLWSEADI 120

Query: 240 VH 242
           V+
Sbjct: 121 VY 122

[Close]
BLAST of Moc04g10090 vs. ExPASy TrEMBL
Match: A0A6J1D3R7 (uncharacterized protein LOC111016993 OS=Momordica charantia OX=3673 GN=LOC111016993 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-09
Identity = 40/119 (33.61%), Postives = 62/119 (52.10%), Query Frame = 0 

Query: 127 GRTRSTAAGLQGKEWYRDLLDPTVQLKDEVVDALVLFTAKKLEKCVHLCCKKFAIGDVLL 186
           G TR T   ++ K W+R+LL P      EVVD L +   KKLE+   LC +KF  GD++L
Sbjct: 108 GATRKTVYSIKNKAWFRNLLRPGNWCTAEVVDELFMLLRKKLEQRPDLCSRKFTTGDLVL 167

Query: 187 STLLNRTDGPYVAMK-PGVLSTRI--EYPW-SQENTIFRYVFGRQSNQNVAWTEADIVH 242
           +    R D  Y  M+    L +++  EY W  ++ +I  Y  G  ++  + W E D ++
Sbjct: 168 ANYFRRKDDLYACMQSDSSLPSKVAAEYDWDGRDESIMGYTDGTHTDYPLRWMEVDAIY 226

[Close]
BLAST of Moc04g10090 vs. ExPASy TrEMBL
Match: A0A6J1D492 (uncharacterized protein LOC111016890 OS=Momordica charantia OX=3673 GN=LOC111016890 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.3e-08
Identity = 30/42 (71.43%), Postives = 36/42 (85.71%), Query Frame = 0 

Query: 200 MKPGVLSTRIEYPWSQENTIFRYVFGRQSNQNVAWTEADIVH 242
           MKP VLSTRI YPW +ENTI+RYV GRQS+ NV W++ADIV+
Sbjct: 1   MKPXVLSTRINYPWXEENTIWRYVHGRQSDHNVPWSDADIVY 42

[Close]
BLAST of Moc04g10090 vs. ExPASy TrEMBL
Match: A0A6J1DJX9 (uncharacterized protein LOC111020757 OS=Momordica charantia OX=3673 GN=LOC111020757 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-06
Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0 

Query: 35 MDLRLIIDRNDWFPATLMNLGHVDKTSTRIK 66
          MDLRLIIDRNDWFPATL NL H+DKTSTRIK
Sbjct: 1  MDLRLIIDRNDWFPATLTNLAHIDKTSTRIK 31

The following BLAST results are available for this feature:
BLAST of Moc04g10090 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022155476.13.8e-9082.83uncharacterized protein LOC111022607 [Momordica charantia][more]
XP_022158807.12.0e-3560.66uncharacterized protein LOC111025273 [Momordica charantia][more]
XP_022148308.12.5e-0933.61uncharacterized protein LOC111016993 [Momordica charantia][more]
XP_022148137.12.8e-0871.43uncharacterized protein LOC111016890 [Momordica charantia][more]
XP_022153201.12.6e-0690.32uncharacterized protein LOC111020757 [Momordica charantia][more]
BLAST of Moc04g10090 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc04g10090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DRS01.8e-9082.83uncharacterized protein LOC111022607 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DY609.8e-3660.66uncharacterized protein LOC111025273 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1D3R71.2e-0933.61uncharacterized protein LOC111016993 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
A0A6J1D4921.3e-0871.43uncharacterized protein LOC111016890 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
A0A6J1DJX91.2e-0690.32uncharacterized protein LOC111020757 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
BLAST of Moc04g10090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc04g10090.1Moc04g10090.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0008234 cysteine-type peptidase activity