Moc04g09470 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc04g09470
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotransposable element Tf2
Locationchr4: 6974055 .. 6975486 (+)
RNA-Seq ExpressionMoc04g09470
SyntenyMoc04g09470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACCTCCTCCCAGTCGGAGACGCCCAAACACTCAGCGGCCTCCGCCGCAAAACAATCAGCGACCCCCGTCGCCGAGAAATGAATCAACCATTTCTCTTCAAAGAGTAGCATCCTCCTCAAGAGCTGCTATCTCAAAGGGCAAAAGGCCCATTACTCAATCATCTGTACCATCTCCGATGAGTGCAGAAAATTATGTAATGGATATCCAGTTTGAAACGGTATCCAGACGCCAGCAAGGTTCTGCACAAAGAACCTTGACTATCCAAACAGGCCCTTCAAGCCTTCCCACTCCCTCAAGCACGTTGTTACGCCCCTTCGGTAATACAACGAGAAACAGGCGCCCTGCTAGCAGCCGCCACTTCAAAACCGACGGTTCCGAGGAATCCTTCCTCGTTCTCTCAAATCGTCAGGCCAAAGGTTTTCCAGCTAAGGCCTCCAATTTCTGGTTATTTCACCAAAACAACCCTGGTGGACTCAATCATTGAACCAGAGTTCGACGGACCTTCGGTCCAAGAAGTCTGCAAACAAATATTTCCTCATGGCTTTAACTTCCTGCCAGAGGATCTTCTAAAAGCTCGCACCTTTTATGAGTTTATTCTGGTAGATTCAAAGTCTGCAGAAATGACTCATATTCCAGACAGAAATGATCCTTCCAGGACAATTTACTCAAAACTCAGGATCTTCCGCATCCTTACCCCTTCCTCCTAGAAACAGGGAATGTTTGTAGGGAAGAAACTGACGGCGACCTTTCAGCCTCAGACTTACAACTATCGCGACTACATGAAGGCATGGTATGTTGTCTTCTGGTTGCAAGGTTACAACCATTCTTGGTTTGTGACTTTTTGTAAGCAAGCTTACAAATCGCACTTTCCGAATTGGTTTCAAAGTTGGTGGACATATTTTGGACTCTCCGAAGAAATTTTTCCGGTTGAAGTTCAAAGATCGTACCATCTGTTCCAACAAAGTATCTATTCGTCTCCCCTTTCTAAGACGGTTAGATTTGCTTTGTATTTTCAAATACCATGGATCTTTTGCTGGAATTTCCAGCTAGGACCCAGTGGCAACTTCAAAGCATTGAGCAAAGCTTTACGCATCAAGTGGTGGGAAAAATTCGATTATTCCTATCTAGATTCCTAGAAGATGAAGAACTGGTTGAAAACCAACATTCATCTCCAGGACGTGACAAGGCAAGAAGACGAGAGTTTCCTTCTAGCCAAAAATGCTGTCATGAGCTCGCTAGCTGGAGCCGGATCCCAAGCCGACTTCAACTCAGTTCTCAATACGGTCGCGGTTCAAATCTCTGACCCAGACGACCCCCAGACAGATGTAGACTTCTCCACCTCTATCAACAATGATGTCGAAGAAGACTTCGATCCCTTCGAAGGATACGACATCAACGACCCATATCTAGATTCACAGCCTAGCTGA

mRNA sequence

ATGGAACCTCCTCCCAGTCGGAGACGCCCAAACACTCAGCGGCCTCCGCCGCAAAACAATCAGCGACCCCCGTCGCCGAGAAATGAATCAACCATTTCTCTTCAAAGAGTAGCATCCTCCTCAAGAGCTGCTATCTCAAAGGGCAAAAGGCCCATTACTCAATCATCTGTACCATCTCCGATGAGTGCAGAAAATTATGTAATGGATATCCAGTTTGAAACGGTATCCAGACGCCAGCAAGGTTCTGCACAAAGAACCTTGACTATCCAAACAGGCCCTTCAAGCCTTCCCACTCCCTCAAGCACGTTGTTACGCCCCTTCGGTAATACAACGAGAAACAGGCGCCCTGCTAGCAGCCGCCACTTCAAAACCGACGGTTCCGAGGAATCCTTCCTCGTTCTCTCAAATCGTCAGGCCAAAGGGAAGAAACTGACGGCGACCTTTCAGCCTCAGACTTACAACTATCGCGACTACATGAAGGCATGGTATGTTGTCTTCTGGTTGCAAGCTAGGACCCAGTGGCAACTTCAAAGCATTGAGCAAAGCTTTACGCATCAAGTGGACGTGACAAGGCAAGAAGACGAGAGTTTCCTTCTAGCCAAAAATGCTGTCATGAGCTCGCTAGCTGGAGCCGGATCCCAAGCCGACTTCAACTCAGTTCTCAATACGGTCGCGGTTCAAATCTCTGACCCAGACGACCCCCAGACAGATGTAGACTTCTCCACCTCTATCAACAATGATGTCGAAGAAGACTTCGATCCCTTCGAAGGATACGACATCAACGACCCATATCTAGATTCACAGCCTAGCTGA

Coding sequence (CDS)

ATGGAACCTCCTCCCAGTCGGAGACGCCCAAACACTCAGCGGCCTCCGCCGCAAAACAATCAGCGACCCCCGTCGCCGAGAAATGAATCAACCATTTCTCTTCAAAGAGTAGCATCCTCCTCAAGAGCTGCTATCTCAAAGGGCAAAAGGCCCATTACTCAATCATCTGTACCATCTCCGATGAGTGCAGAAAATTATGTAATGGATATCCAGTTTGAAACGGTATCCAGACGCCAGCAAGGTTCTGCACAAAGAACCTTGACTATCCAAACAGGCCCTTCAAGCCTTCCCACTCCCTCAAGCACGTTGTTACGCCCCTTCGGTAATACAACGAGAAACAGGCGCCCTGCTAGCAGCCGCCACTTCAAAACCGACGGTTCCGAGGAATCCTTCCTCGTTCTCTCAAATCGTCAGGCCAAAGGGAAGAAACTGACGGCGACCTTTCAGCCTCAGACTTACAACTATCGCGACTACATGAAGGCATGGTATGTTGTCTTCTGGTTGCAAGCTAGGACCCAGTGGCAACTTCAAAGCATTGAGCAAAGCTTTACGCATCAAGTGGACGTGACAAGGCAAGAAGACGAGAGTTTCCTTCTAGCCAAAAATGCTGTCATGAGCTCGCTAGCTGGAGCCGGATCCCAAGCCGACTTCAACTCAGTTCTCAATACGGTCGCGGTTCAAATCTCTGACCCAGACGACCCCCAGACAGATGTAGACTTCTCCACCTCTATCAACAATGATGTCGAAGAAGACTTCGATCCCTTCGAAGGATACGACATCAACGACCCATATCTAGATTCACAGCCTAGCTGA

Protein sequence

MEPPPSRRRPNTQRPPPQNNQRPPSPRNESTISLQRVASSSRAAISKGKRPITQSSVPSPMSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSLPTPSSTLLRPFGNTTRNRRPASSRHFKTDGSEESFLVLSNRQAKGKKLTATFQPQTYNYRDYMKAWYVVFWLQARTQWQLQSIEQSFTHQVDVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQISDPDDPQTDVDFSTSINNDVEEDFDPFEGYDINDPYLDSQPS
Homology
BLAST of Moc04g09470 vs. NCBI nr
Match: KAA0050447.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-31
Identity = 139/385 (36.10%), Postives = 179/385 (46.49%), Query Frame = 0

Query: 1   MEPPPSRRRPNTQRPPPQNNQRPPSPRNESTISLQRVASSSRAAISKGKRPITQSSVPSP 60
           MEPPP R+R   QR  PQ+NQ      N S    Q VASSS    S+GK P  QSS  SP
Sbjct: 1   MEPPPGRQRSPNQRQSPQSNQ------NNSPQRPQTVASSSETTPSRGK-PSAQSSAHSP 60

Query: 61  MSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSL-PTPSSTLLRPFGNTTRNRRPAS- 120
           MSAENY MD+QFE VSRR+QGSAQRTLTIQ+  SSL P PS+ LL P G TT N+R AS 
Sbjct: 61  MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLCPSGPTTPNKRVASP 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 AASSSRSAISRNPSSYSQIVRLKVFQPRPPINGYFTKTTMVDLTIEPEFDGPFVHEVCNQ 180

Query: 181 ---------------SRHF------------------KTDGSE------ESFLVLSNRQA 240
                          +R F                  K D S+        F VL+    
Sbjct: 181 IFPHEFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKFRIFRVLTPSYW 240

Query: 241 K-----GKKLTATFQPQTYNYRD------YMKAWYVVFWLQAR-TQWQLQSIEQSF---T 270
           K     G+K +  F+P +YNYR         K+  + +W +   +  ++  I+  F    
Sbjct: 241 KQGMFVGRKFSHPFKPPSYNYRPSGNFKALSKSLIIKWWEKFNYSHLEVNKIKDWFKANI 300

BLAST of Moc04g09470 vs. NCBI nr
Match: KAA0050443.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 142.9 bits (359), Expect = 4.0e-30
Identity = 152/478 (31.80%), Postives = 186/478 (38.91%), Query Frame = 0

Query: 1   MEPPPSRRRPNTQRPPPQNNQRPPSPRNESTISLQRVASSSRAAISKGKRPITQSSVPSP 60
           MEPPP R+ P  QR  PQ+NQ     R   TI      SSS    SKGK P TQSS PS 
Sbjct: 1   MEPPPGRQLPLNQRQSPQSNQNNSPQRPPQTI-----VSSSETTPSKGK-PSTQSSAPSL 60

Query: 61  MSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSL-PTPSSTLLRPFGNTTRNRRPAS- 120
           MSAENY MD+QFE VSRR QGSAQRTLTIQ+  SSL P PS+ LLRP G TT N+R AS 
Sbjct: 61  MSAENYAMDLQFEQVSRRHQGSAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 120

Query: 121 -------------------------------SRHF------------------------- 180
                                          + +F                         
Sbjct: 121 TASSSRSAIPRNPSSYSQIVRPKVFQPRPSINGYFTKTTMVDLTIEPEFDGPSVHEVCNQ 180

Query: 181 -------------------------------------KTDGSE------ESFLVLSNRQA 240
                                                K D S+        F VL+    
Sbjct: 181 IFPHEFNFLPEDLTKTMTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 240

Query: 241 K-----GKKLTATFQPQTYNYRDYMKAWYVVFWLQA------------------------ 270
           K     G+K +  F+P +YNYRDY KAWY+VFWLQA                        
Sbjct: 241 KQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFMTFCKQAYKMHFPNWFQN 300

BLAST of Moc04g09470 vs. NCBI nr
Match: KAA0040832.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa])

HSP 1 Score: 141.7 bits (356), Expect = 9.0e-30
Identity = 148/483 (30.64%), Postives = 193/483 (39.96%), Query Frame = 0

Query: 1   MEPPPSRRRPNTQRPPPQNN-----QRPPSPRNESTISLQRVASSSRAAISKGKRPITQS 60
           MEPPP R+RP  QR P QN+     QRPP          Q VA+SS    S+ K P  QS
Sbjct: 1   MEPPPGRQRPRNQRQPLQNSQNSNPQRPP----------QSVATSSGTTPSRKKSP-AQS 60

Query: 61  SVPSPMSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSL-PTPSSTLLRPFGNTTRNR 120
           S PSPMSAENY MD+QFE VSRR+QGSAQRTLTIQ+  SSL P P + LL P G T  N+
Sbjct: 61  SAPSPMSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPKTALLCPSGPTAPNK 120

Query: 121 RPAS--------------------------------SRHF------------KTDG---- 180
           R AS                                + +F            + DG    
Sbjct: 121 RAASPAASSSRSAIPRNPSSYSQIVRPNIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQ 180

Query: 181 --------------SEE--------SFLVLSNRQAK------------------------ 240
                         SE+         ++++ ++ AK                        
Sbjct: 181 EVCNQIFPHGFNFLSEDLSKTRTFYEYILVDSKSAKITHVPDKIDPSKIIYSKLRIFRVL 240

Query: 241 -----------GKKLTATFQPQTYNYRDYMKAWYVVFWLQA------------------- 270
                      G+K +  F+P +YNYRDY KAWY+VFWLQA                   
Sbjct: 241 TPSYWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFP 300

BLAST of Moc04g09470 vs. NCBI nr
Match: KAA0032918.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa])

HSP 1 Score: 141.7 bits (356), Expect = 9.0e-30
Identity = 151/479 (31.52%), Postives = 191/479 (39.87%), Query Frame = 0

Query: 1   MEPPPSRRRPNTQRPPPQNNQRPPSPRNESTISLQRVASSSRAAISKGKRPITQSSVPSP 60
           MEPPP R+RP  +R PP NNQ      N S    Q VASSS    S+ + P +QSS PSP
Sbjct: 1   MEPPPDRQRPPNERQPPPNNQ-----NNSSLKPPQSVASSSGTTPSRKEFP-SQSSAPSP 60

Query: 61  MSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSL-PTPSSTLLRPFGNTTRNRRPAS- 120
           MSAENY MD+QFE VSRR+QGSA+RTLTIQ+  SSL P PS+ LLRP G TT N+R AS 
Sbjct: 61  MSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 GASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQ 180

Query: 181 ---------------SRHF------------------KTDGSE------ESFLVLSNRQA 240
                          +R F                  K D S+        F VL+    
Sbjct: 181 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 240

Query: 241 K-----GKKLTATFQPQTYNYRDYMKAWYVVFWLQA------------------------ 270
           K     G+K + +F+  +YNYRDY KAWY+VFWL A                        
Sbjct: 241 KQGMFVGRKFSHSFKQPSYNYRDYTKAWYIVFWLHAYNHFWFVTFCKQAYKMHFPNWFQN 300

BLAST of Moc04g09470 vs. NCBI nr
Match: KAA0038028.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-29
Identity = 120/335 (35.82%), Postives = 153/335 (45.67%), Query Frame = 0

Query: 61  MSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSL-PTPSSTLLRPFGNTTRNRRPAS- 120
           MSAENY MD+QFE VSRR+QGSAQRTLTIQ+  SSL P PS+ LLRP G TT N+R AS 
Sbjct: 1   MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 60

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 61  AASSSRSVIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQ 120

Query: 181 ---------------SRHF------------------KTDGSE------ESFLVLSNRQA 240
                          +R F                  K D S+        F VL+    
Sbjct: 121 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 180

Query: 241 K-----GKKLTATFQPQTYNYRDYMKAWYVVFWL--------QARTQW---------QLQ 270
           K     G+K +  F+P +YNYRDY KAWY++  L          R +W         ++ 
Sbjct: 181 KQGMFVGRKFSHPFKPPSYNYRDYTKAWYILGPLGNFKALSKSLRIKWWEKFNYSHLEVN 240

BLAST of Moc04g09470 vs. ExPASy TrEMBL
Match: A0A5A7U7T9 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00530 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.0e-31
Identity = 139/385 (36.10%), Postives = 179/385 (46.49%), Query Frame = 0

Query: 1   MEPPPSRRRPNTQRPPPQNNQRPPSPRNESTISLQRVASSSRAAISKGKRPITQSSVPSP 60
           MEPPP R+R   QR  PQ+NQ      N S    Q VASSS    S+GK P  QSS  SP
Sbjct: 1   MEPPPGRQRSPNQRQSPQSNQ------NNSPQRPQTVASSSETTPSRGK-PSAQSSAHSP 60

Query: 61  MSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSL-PTPSSTLLRPFGNTTRNRRPAS- 120
           MSAENY MD+QFE VSRR+QGSAQRTLTIQ+  SSL P PS+ LL P G TT N+R AS 
Sbjct: 61  MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLCPSGPTTPNKRVASP 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 AASSSRSAISRNPSSYSQIVRLKVFQPRPPINGYFTKTTMVDLTIEPEFDGPFVHEVCNQ 180

Query: 181 ---------------SRHF------------------KTDGSE------ESFLVLSNRQA 240
                          +R F                  K D S+        F VL+    
Sbjct: 181 IFPHEFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKFRIFRVLTPSYW 240

Query: 241 K-----GKKLTATFQPQTYNYRD------YMKAWYVVFWLQAR-TQWQLQSIEQSF---T 270
           K     G+K +  F+P +YNYR         K+  + +W +   +  ++  I+  F    
Sbjct: 241 KQGMFVGRKFSHPFKPPSYNYRPSGNFKALSKSLIIKWWEKFNYSHLEVNKIKDWFKANI 300

BLAST of Moc04g09470 vs. ExPASy TrEMBL
Match: A0A5A7U3G5 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00490 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.0e-30
Identity = 152/478 (31.80%), Postives = 186/478 (38.91%), Query Frame = 0

Query: 1   MEPPPSRRRPNTQRPPPQNNQRPPSPRNESTISLQRVASSSRAAISKGKRPITQSSVPSP 60
           MEPPP R+ P  QR  PQ+NQ     R   TI      SSS    SKGK P TQSS PS 
Sbjct: 1   MEPPPGRQLPLNQRQSPQSNQNNSPQRPPQTI-----VSSSETTPSKGK-PSTQSSAPSL 60

Query: 61  MSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSL-PTPSSTLLRPFGNTTRNRRPAS- 120
           MSAENY MD+QFE VSRR QGSAQRTLTIQ+  SSL P PS+ LLRP G TT N+R AS 
Sbjct: 61  MSAENYAMDLQFEQVSRRHQGSAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 120

Query: 121 -------------------------------SRHF------------------------- 180
                                          + +F                         
Sbjct: 121 TASSSRSAIPRNPSSYSQIVRPKVFQPRPSINGYFTKTTMVDLTIEPEFDGPSVHEVCNQ 180

Query: 181 -------------------------------------KTDGSE------ESFLVLSNRQA 240
                                                K D S+        F VL+    
Sbjct: 181 IFPHEFNFLPEDLTKTMTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 240

Query: 241 K-----GKKLTATFQPQTYNYRDYMKAWYVVFWLQA------------------------ 270
           K     G+K +  F+P +YNYRDY KAWY+VFWLQA                        
Sbjct: 241 KQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFMTFCKQAYKMHFPNWFQN 300

BLAST of Moc04g09470 vs. ExPASy TrEMBL
Match: A0A5A7TBK1 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold333G00520 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 4.4e-30
Identity = 148/483 (30.64%), Postives = 193/483 (39.96%), Query Frame = 0

Query: 1   MEPPPSRRRPNTQRPPPQNN-----QRPPSPRNESTISLQRVASSSRAAISKGKRPITQS 60
           MEPPP R+RP  QR P QN+     QRPP          Q VA+SS    S+ K P  QS
Sbjct: 1   MEPPPGRQRPRNQRQPLQNSQNSNPQRPP----------QSVATSSGTTPSRKKSP-AQS 60

Query: 61  SVPSPMSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSL-PTPSSTLLRPFGNTTRNR 120
           S PSPMSAENY MD+QFE VSRR+QGSAQRTLTIQ+  SSL P P + LL P G T  N+
Sbjct: 61  SAPSPMSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPKTALLCPSGPTAPNK 120

Query: 121 RPAS--------------------------------SRHF------------KTDG---- 180
           R AS                                + +F            + DG    
Sbjct: 121 RAASPAASSSRSAIPRNPSSYSQIVRPNIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQ 180

Query: 181 --------------SEE--------SFLVLSNRQAK------------------------ 240
                         SE+         ++++ ++ AK                        
Sbjct: 181 EVCNQIFPHGFNFLSEDLSKTRTFYEYILVDSKSAKITHVPDKIDPSKIIYSKLRIFRVL 240

Query: 241 -----------GKKLTATFQPQTYNYRDYMKAWYVVFWLQA------------------- 270
                      G+K +  F+P +YNYRDY KAWY+VFWLQA                   
Sbjct: 241 TPSYWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFP 300

BLAST of Moc04g09470 vs. ExPASy TrEMBL
Match: A0A5A7SQU5 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G001670 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 4.4e-30
Identity = 151/479 (31.52%), Postives = 191/479 (39.87%), Query Frame = 0

Query: 1   MEPPPSRRRPNTQRPPPQNNQRPPSPRNESTISLQRVASSSRAAISKGKRPITQSSVPSP 60
           MEPPP R+RP  +R PP NNQ      N S    Q VASSS    S+ + P +QSS PSP
Sbjct: 1   MEPPPDRQRPPNERQPPPNNQ-----NNSSLKPPQSVASSSGTTPSRKEFP-SQSSAPSP 60

Query: 61  MSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSL-PTPSSTLLRPFGNTTRNRRPAS- 120
           MSAENY MD+QFE VSRR+QGSA+RTLTIQ+  SSL P PS+ LLRP G TT N+R AS 
Sbjct: 61  MSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 GASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQ 180

Query: 181 ---------------SRHF------------------KTDGSE------ESFLVLSNRQA 240
                          +R F                  K D S+        F VL+    
Sbjct: 181 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 240

Query: 241 K-----GKKLTATFQPQTYNYRDYMKAWYVVFWLQA------------------------ 270
           K     G+K + +F+  +YNYRDY KAWY+VFWL A                        
Sbjct: 241 KQGMFVGRKFSHSFKQPSYNYRDYTKAWYIVFWLHAYNHFWFVTFCKQAYKMHFPNWFQN 300

BLAST of Moc04g09470 vs. ExPASy TrEMBL
Match: A0A5D3DX32 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003460 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 5.7e-30
Identity = 151/479 (31.52%), Postives = 191/479 (39.87%), Query Frame = 0

Query: 1   MEPPPSRRRPNTQRPPPQNNQRPPSPRNESTISLQRVASSSRAAISKGKRPITQSSVPSP 60
           MEPPP R+RP  +R PP NNQ      N S    Q VASSS    S+ + P +QSS PSP
Sbjct: 1   MEPPPDRQRPPNERQPPPNNQ-----NNSSLKPPQSVASSSGTTPSRKEFP-SQSSAPSP 60

Query: 61  MSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSL-PTPSSTLLRPFGNTTRNRRPAS- 120
           MSAENY MD+QFE VSRR+QGSA+RTLTIQ+  SSL P PS+ LLRP G TT N+R AS 
Sbjct: 61  MSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTELLRPSGPTTPNKRAASP 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 GASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQ 180

Query: 181 ---------------SRHF------------------KTDGSE------ESFLVLSNRQA 240
                          +R F                  K D S+        F VL+    
Sbjct: 181 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 240

Query: 241 K-----GKKLTATFQPQTYNYRDYMKAWYVVFWLQA------------------------ 270
           K     G+K + +F+  +YNYRDY KAWY+VFWL A                        
Sbjct: 241 KQGMFVGRKFSHSFKQPSYNYRDYTKAWYIVFWLHAYNHFWFVTFCKQAYKMHFPNWFQN 300

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0050447.12.1e-3136.10polyprotein [Cucumis melo var. makuwa][more]
KAA0050443.14.0e-3031.80polyprotein [Cucumis melo var. makuwa][more]
KAA0040832.19.0e-3030.64Retrotransposable element Tf2 [Cucumis melo var. makuwa][more]
KAA0032918.19.0e-3031.52Retrotransposable element Tf2 [Cucumis melo var. makuwa][more]
KAA0038028.11.2e-2935.82polyprotein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U7T91.0e-3136.10Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00530 PE... [more]
A0A5A7U3G52.0e-3031.80Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00490 PE... [more]
A0A5A7TBK14.4e-3030.64Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5A7SQU54.4e-3031.52Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5D3DX325.7e-3031.52Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..60

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc04g09470.1Moc04g09470.1mRNA