Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACCTCCTCCCAGTCGGAGACGCCCAAACACTCAGCGGCCTCCGCCGCAAAACAATCAGCGACCCCCGTCGCCGAGAAATGAATCAACCATTTCTCTTCAAAGAGTAGCATCCTCCTCAAGAGCTGCTATCTCAAAGGGCAAAAGGCCCATTACTCAATCATCTGTACCATCTCCGATGAGTGCAGAAAATTATGTAATGGATATCCAGTTTGAAACGGTATCCAGACGCCAGCAAGGTTCTGCACAAAGAACCTTGACTATCCAAACAGGCCCTTCAAGCCTTCCCACTCCCTCAAGCACGTTGTTACGCCCCTTCGGTAATACAACGAGAAACAGGCGCCCTGCTAGCAGCCGCCACTTCAAAACCGACGGTTCCGAGGAATCCTTCCTCGTTCTCTCAAATCGTCAGGCCAAAGGTTTTCCAGCTAAGGCCTCCAATTTCTGGTTATTTCACCAAAACAACCCTGGTGGACTCAATCATTGAACCAGAGTTCGACGGACCTTCGGTCCAAGAAGTCTGCAAACAAATATTTCCTCATGGCTTTAACTTCCTGCCAGAGGATCTTCTAAAAGCTCGCACCTTTTATGAGTTTATTCTGGTAGATTCAAAGTCTGCAGAAATGACTCATATTCCAGACAGAAATGATCCTTCCAGGACAATTTACTCAAAACTCAGGATCTTCCGCATCCTTACCCCTTCCTCCTAGAAACAGGGAATGTTTGTAGGGAAGAAACTGACGGCGACCTTTCAGCCTCAGACTTACAACTATCGCGACTACATGAAGGCATGGTATGTTGTCTTCTGGTTGCAAGGTTACAACCATTCTTGGTTTGTGACTTTTTGTAAGCAAGCTTACAAATCGCACTTTCCGAATTGGTTTCAAAGTTGGTGGACATATTTTGGACTCTCCGAAGAAATTTTTCCGGTTGAAGTTCAAAGATCGTACCATCTGTTCCAACAAAGTATCTATTCGTCTCCCCTTTCTAAGACGGTTAGATTTGCTTTGTATTTTCAAATACCATGGATCTTTTGCTGGAATTTCCAGCTAGGACCCAGTGGCAACTTCAAAGCATTGAGCAAAGCTTTACGCATCAAGTGGTGGGAAAAATTCGATTATTCCTATCTAGATTCCTAGAAGATGAAGAACTGGTTGAAAACCAACATTCATCTCCAGGACGTGACAAGGCAAGAAGACGAGAGTTTCCTTCTAGCCAAAAATGCTGTCATGAGCTCGCTAGCTGGAGCCGGATCCCAAGCCGACTTCAACTCAGTTCTCAATACGGTCGCGGTTCAAATCTCTGACCCAGACGACCCCCAGACAGATGTAGACTTCTCCACCTCTATCAACAATGATGTCGAAGAAGACTTCGATCCCTTCGAAGGATACGACATCAACGACCCATATCTAGATTCACAGCCTAGCTGA
mRNA sequence
ATGGAACCTCCTCCCAGTCGGAGACGCCCAAACACTCAGCGGCCTCCGCCGCAAAACAATCAGCGACCCCCGTCGCCGAGAAATGAATCAACCATTTCTCTTCAAAGAGTAGCATCCTCCTCAAGAGCTGCTATCTCAAAGGGCAAAAGGCCCATTACTCAATCATCTGTACCATCTCCGATGAGTGCAGAAAATTATGTAATGGATATCCAGTTTGAAACGGTATCCAGACGCCAGCAAGGTTCTGCACAAAGAACCTTGACTATCCAAACAGGCCCTTCAAGCCTTCCCACTCCCTCAAGCACGTTGTTACGCCCCTTCGGTAATACAACGAGAAACAGGCGCCCTGCTAGCAGCCGCCACTTCAAAACCGACGGTTCCGAGGAATCCTTCCTCGTTCTCTCAAATCGTCAGGCCAAAGGGAAGAAACTGACGGCGACCTTTCAGCCTCAGACTTACAACTATCGCGACTACATGAAGGCATGGTATGTTGTCTTCTGGTTGCAAGCTAGGACCCAGTGGCAACTTCAAAGCATTGAGCAAAGCTTTACGCATCAAGTGGACGTGACAAGGCAAGAAGACGAGAGTTTCCTTCTAGCCAAAAATGCTGTCATGAGCTCGCTAGCTGGAGCCGGATCCCAAGCCGACTTCAACTCAGTTCTCAATACGGTCGCGGTTCAAATCTCTGACCCAGACGACCCCCAGACAGATGTAGACTTCTCCACCTCTATCAACAATGATGTCGAAGAAGACTTCGATCCCTTCGAAGGATACGACATCAACGACCCATATCTAGATTCACAGCCTAGCTGA
Coding sequence (CDS)
ATGGAACCTCCTCCCAGTCGGAGACGCCCAAACACTCAGCGGCCTCCGCCGCAAAACAATCAGCGACCCCCGTCGCCGAGAAATGAATCAACCATTTCTCTTCAAAGAGTAGCATCCTCCTCAAGAGCTGCTATCTCAAAGGGCAAAAGGCCCATTACTCAATCATCTGTACCATCTCCGATGAGTGCAGAAAATTATGTAATGGATATCCAGTTTGAAACGGTATCCAGACGCCAGCAAGGTTCTGCACAAAGAACCTTGACTATCCAAACAGGCCCTTCAAGCCTTCCCACTCCCTCAAGCACGTTGTTACGCCCCTTCGGTAATACAACGAGAAACAGGCGCCCTGCTAGCAGCCGCCACTTCAAAACCGACGGTTCCGAGGAATCCTTCCTCGTTCTCTCAAATCGTCAGGCCAAAGGGAAGAAACTGACGGCGACCTTTCAGCCTCAGACTTACAACTATCGCGACTACATGAAGGCATGGTATGTTGTCTTCTGGTTGCAAGCTAGGACCCAGTGGCAACTTCAAAGCATTGAGCAAAGCTTTACGCATCAAGTGGACGTGACAAGGCAAGAAGACGAGAGTTTCCTTCTAGCCAAAAATGCTGTCATGAGCTCGCTAGCTGGAGCCGGATCCCAAGCCGACTTCAACTCAGTTCTCAATACGGTCGCGGTTCAAATCTCTGACCCAGACGACCCCCAGACAGATGTAGACTTCTCCACCTCTATCAACAATGATGTCGAAGAAGACTTCGATCCCTTCGAAGGATACGACATCAACGACCCATATCTAGATTCACAGCCTAGCTGA
Protein sequence
MEPPPSRRRPNTQRPPPQNNQRPPSPRNESTISLQRVASSSRAAISKGKRPITQSSVPSPMSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSLPTPSSTLLRPFGNTTRNRRPASSRHFKTDGSEESFLVLSNRQAKGKKLTATFQPQTYNYRDYMKAWYVVFWLQARTQWQLQSIEQSFTHQVDVTRQEDESFLLAKNAVMSSLAGAGSQADFNSVLNTVAVQISDPDDPQTDVDFSTSINNDVEEDFDPFEGYDINDPYLDSQPS
Homology
BLAST of Moc04g09470 vs. NCBI nr
Match:
KAA0050447.1 (polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 147.1 bits (370), Expect = 2.1e-31
Identity = 139/385 (36.10%), Postives = 179/385 (46.49%), Query Frame = 0
Query: 1 MEPPPSRRRPNTQRPPPQNNQRPPSPRNESTISLQRVASSSRAAISKGKRPITQSSVPSP 60
MEPPP R+R QR PQ+NQ N S Q VASSS S+GK P QSS SP
Sbjct: 1 MEPPPGRQRSPNQRQSPQSNQ------NNSPQRPQTVASSSETTPSRGK-PSAQSSAHSP 60
Query: 61 MSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSL-PTPSSTLLRPFGNTTRNRRPAS- 120
MSAENY MD+QFE VSRR+QGSAQRTLTIQ+ SSL P PS+ LL P G TT N+R AS
Sbjct: 61 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLCPSGPTTPNKRVASP 120
Query: 121 ------------------------------------------------------------ 180
Sbjct: 121 AASSSRSAISRNPSSYSQIVRLKVFQPRPPINGYFTKTTMVDLTIEPEFDGPFVHEVCNQ 180
Query: 181 ---------------SRHF------------------KTDGSE------ESFLVLSNRQA 240
+R F K D S+ F VL+
Sbjct: 181 IFPHEFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKFRIFRVLTPSYW 240
Query: 241 K-----GKKLTATFQPQTYNYRD------YMKAWYVVFWLQAR-TQWQLQSIEQSF---T 270
K G+K + F+P +YNYR K+ + +W + + ++ I+ F
Sbjct: 241 KQGMFVGRKFSHPFKPPSYNYRPSGNFKALSKSLIIKWWEKFNYSHLEVNKIKDWFKANI 300
BLAST of Moc04g09470 vs. NCBI nr
Match:
KAA0050443.1 (polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 142.9 bits (359), Expect = 4.0e-30
Identity = 152/478 (31.80%), Postives = 186/478 (38.91%), Query Frame = 0
Query: 1 MEPPPSRRRPNTQRPPPQNNQRPPSPRNESTISLQRVASSSRAAISKGKRPITQSSVPSP 60
MEPPP R+ P QR PQ+NQ R TI SSS SKGK P TQSS PS
Sbjct: 1 MEPPPGRQLPLNQRQSPQSNQNNSPQRPPQTI-----VSSSETTPSKGK-PSTQSSAPSL 60
Query: 61 MSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSL-PTPSSTLLRPFGNTTRNRRPAS- 120
MSAENY MD+QFE VSRR QGSAQRTLTIQ+ SSL P PS+ LLRP G TT N+R AS
Sbjct: 61 MSAENYAMDLQFEQVSRRHQGSAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 120
Query: 121 -------------------------------SRHF------------------------- 180
+ +F
Sbjct: 121 TASSSRSAIPRNPSSYSQIVRPKVFQPRPSINGYFTKTTMVDLTIEPEFDGPSVHEVCNQ 180
Query: 181 -------------------------------------KTDGSE------ESFLVLSNRQA 240
K D S+ F VL+
Sbjct: 181 IFPHEFNFLPEDLTKTMTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 240
Query: 241 K-----GKKLTATFQPQTYNYRDYMKAWYVVFWLQA------------------------ 270
K G+K + F+P +YNYRDY KAWY+VFWLQA
Sbjct: 241 KQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFMTFCKQAYKMHFPNWFQN 300
BLAST of Moc04g09470 vs. NCBI nr
Match:
KAA0040832.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa])
HSP 1 Score: 141.7 bits (356), Expect = 9.0e-30
Identity = 148/483 (30.64%), Postives = 193/483 (39.96%), Query Frame = 0
Query: 1 MEPPPSRRRPNTQRPPPQNN-----QRPPSPRNESTISLQRVASSSRAAISKGKRPITQS 60
MEPPP R+RP QR P QN+ QRPP Q VA+SS S+ K P QS
Sbjct: 1 MEPPPGRQRPRNQRQPLQNSQNSNPQRPP----------QSVATSSGTTPSRKKSP-AQS 60
Query: 61 SVPSPMSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSL-PTPSSTLLRPFGNTTRNR 120
S PSPMSAENY MD+QFE VSRR+QGSAQRTLTIQ+ SSL P P + LL P G T N+
Sbjct: 61 SAPSPMSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPKTALLCPSGPTAPNK 120
Query: 121 RPAS--------------------------------SRHF------------KTDG---- 180
R AS + +F + DG
Sbjct: 121 RAASPAASSSRSAIPRNPSSYSQIVRPNIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQ 180
Query: 181 --------------SEE--------SFLVLSNRQAK------------------------ 240
SE+ ++++ ++ AK
Sbjct: 181 EVCNQIFPHGFNFLSEDLSKTRTFYEYILVDSKSAKITHVPDKIDPSKIIYSKLRIFRVL 240
Query: 241 -----------GKKLTATFQPQTYNYRDYMKAWYVVFWLQA------------------- 270
G+K + F+P +YNYRDY KAWY+VFWLQA
Sbjct: 241 TPSYWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFP 300
BLAST of Moc04g09470 vs. NCBI nr
Match:
KAA0032918.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa])
HSP 1 Score: 141.7 bits (356), Expect = 9.0e-30
Identity = 151/479 (31.52%), Postives = 191/479 (39.87%), Query Frame = 0
Query: 1 MEPPPSRRRPNTQRPPPQNNQRPPSPRNESTISLQRVASSSRAAISKGKRPITQSSVPSP 60
MEPPP R+RP +R PP NNQ N S Q VASSS S+ + P +QSS PSP
Sbjct: 1 MEPPPDRQRPPNERQPPPNNQ-----NNSSLKPPQSVASSSGTTPSRKEFP-SQSSAPSP 60
Query: 61 MSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSL-PTPSSTLLRPFGNTTRNRRPAS- 120
MSAENY MD+QFE VSRR+QGSA+RTLTIQ+ SSL P PS+ LLRP G TT N+R AS
Sbjct: 61 MSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 120
Query: 121 ------------------------------------------------------------ 180
Sbjct: 121 GASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQ 180
Query: 181 ---------------SRHF------------------KTDGSE------ESFLVLSNRQA 240
+R F K D S+ F VL+
Sbjct: 181 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 240
Query: 241 K-----GKKLTATFQPQTYNYRDYMKAWYVVFWLQA------------------------ 270
K G+K + +F+ +YNYRDY KAWY+VFWL A
Sbjct: 241 KQGMFVGRKFSHSFKQPSYNYRDYTKAWYIVFWLHAYNHFWFVTFCKQAYKMHFPNWFQN 300
BLAST of Moc04g09470 vs. NCBI nr
Match:
KAA0038028.1 (polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 141.4 bits (355), Expect = 1.2e-29
Identity = 120/335 (35.82%), Postives = 153/335 (45.67%), Query Frame = 0
Query: 61 MSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSL-PTPSSTLLRPFGNTTRNRRPAS- 120
MSAENY MD+QFE VSRR+QGSAQRTLTIQ+ SSL P PS+ LLRP G TT N+R AS
Sbjct: 1 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 60
Query: 121 ------------------------------------------------------------ 180
Sbjct: 61 AASSSRSVIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQ 120
Query: 181 ---------------SRHF------------------KTDGSE------ESFLVLSNRQA 240
+R F K D S+ F VL+
Sbjct: 121 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 180
Query: 241 K-----GKKLTATFQPQTYNYRDYMKAWYVVFWL--------QARTQW---------QLQ 270
K G+K + F+P +YNYRDY KAWY++ L R +W ++
Sbjct: 181 KQGMFVGRKFSHPFKPPSYNYRDYTKAWYILGPLGNFKALSKSLRIKWWEKFNYSHLEVN 240
BLAST of Moc04g09470 vs. ExPASy TrEMBL
Match:
A0A5A7U7T9 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00530 PE=4 SV=1)
HSP 1 Score: 147.1 bits (370), Expect = 1.0e-31
Identity = 139/385 (36.10%), Postives = 179/385 (46.49%), Query Frame = 0
Query: 1 MEPPPSRRRPNTQRPPPQNNQRPPSPRNESTISLQRVASSSRAAISKGKRPITQSSVPSP 60
MEPPP R+R QR PQ+NQ N S Q VASSS S+GK P QSS SP
Sbjct: 1 MEPPPGRQRSPNQRQSPQSNQ------NNSPQRPQTVASSSETTPSRGK-PSAQSSAHSP 60
Query: 61 MSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSL-PTPSSTLLRPFGNTTRNRRPAS- 120
MSAENY MD+QFE VSRR+QGSAQRTLTIQ+ SSL P PS+ LL P G TT N+R AS
Sbjct: 61 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLCPSGPTTPNKRVASP 120
Query: 121 ------------------------------------------------------------ 180
Sbjct: 121 AASSSRSAISRNPSSYSQIVRLKVFQPRPPINGYFTKTTMVDLTIEPEFDGPFVHEVCNQ 180
Query: 181 ---------------SRHF------------------KTDGSE------ESFLVLSNRQA 240
+R F K D S+ F VL+
Sbjct: 181 IFPHEFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKFRIFRVLTPSYW 240
Query: 241 K-----GKKLTATFQPQTYNYRD------YMKAWYVVFWLQAR-TQWQLQSIEQSF---T 270
K G+K + F+P +YNYR K+ + +W + + ++ I+ F
Sbjct: 241 KQGMFVGRKFSHPFKPPSYNYRPSGNFKALSKSLIIKWWEKFNYSHLEVNKIKDWFKANI 300
BLAST of Moc04g09470 vs. ExPASy TrEMBL
Match:
A0A5A7U3G5 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00490 PE=4 SV=1)
HSP 1 Score: 142.9 bits (359), Expect = 2.0e-30
Identity = 152/478 (31.80%), Postives = 186/478 (38.91%), Query Frame = 0
Query: 1 MEPPPSRRRPNTQRPPPQNNQRPPSPRNESTISLQRVASSSRAAISKGKRPITQSSVPSP 60
MEPPP R+ P QR PQ+NQ R TI SSS SKGK P TQSS PS
Sbjct: 1 MEPPPGRQLPLNQRQSPQSNQNNSPQRPPQTI-----VSSSETTPSKGK-PSTQSSAPSL 60
Query: 61 MSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSL-PTPSSTLLRPFGNTTRNRRPAS- 120
MSAENY MD+QFE VSRR QGSAQRTLTIQ+ SSL P PS+ LLRP G TT N+R AS
Sbjct: 61 MSAENYAMDLQFEQVSRRHQGSAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 120
Query: 121 -------------------------------SRHF------------------------- 180
+ +F
Sbjct: 121 TASSSRSAIPRNPSSYSQIVRPKVFQPRPSINGYFTKTTMVDLTIEPEFDGPSVHEVCNQ 180
Query: 181 -------------------------------------KTDGSE------ESFLVLSNRQA 240
K D S+ F VL+
Sbjct: 181 IFPHEFNFLPEDLTKTMTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 240
Query: 241 K-----GKKLTATFQPQTYNYRDYMKAWYVVFWLQA------------------------ 270
K G+K + F+P +YNYRDY KAWY+VFWLQA
Sbjct: 241 KQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFMTFCKQAYKMHFPNWFQN 300
BLAST of Moc04g09470 vs. ExPASy TrEMBL
Match:
A0A5A7TBK1 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold333G00520 PE=4 SV=1)
HSP 1 Score: 141.7 bits (356), Expect = 4.4e-30
Identity = 148/483 (30.64%), Postives = 193/483 (39.96%), Query Frame = 0
Query: 1 MEPPPSRRRPNTQRPPPQNN-----QRPPSPRNESTISLQRVASSSRAAISKGKRPITQS 60
MEPPP R+RP QR P QN+ QRPP Q VA+SS S+ K P QS
Sbjct: 1 MEPPPGRQRPRNQRQPLQNSQNSNPQRPP----------QSVATSSGTTPSRKKSP-AQS 60
Query: 61 SVPSPMSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSL-PTPSSTLLRPFGNTTRNR 120
S PSPMSAENY MD+QFE VSRR+QGSAQRTLTIQ+ SSL P P + LL P G T N+
Sbjct: 61 SAPSPMSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPKTALLCPSGPTAPNK 120
Query: 121 RPAS--------------------------------SRHF------------KTDG---- 180
R AS + +F + DG
Sbjct: 121 RAASPAASSSRSAIPRNPSSYSQIVRPNIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQ 180
Query: 181 --------------SEE--------SFLVLSNRQAK------------------------ 240
SE+ ++++ ++ AK
Sbjct: 181 EVCNQIFPHGFNFLSEDLSKTRTFYEYILVDSKSAKITHVPDKIDPSKIIYSKLRIFRVL 240
Query: 241 -----------GKKLTATFQPQTYNYRDYMKAWYVVFWLQA------------------- 270
G+K + F+P +YNYRDY KAWY+VFWLQA
Sbjct: 241 TPSYWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFP 300
BLAST of Moc04g09470 vs. ExPASy TrEMBL
Match:
A0A5A7SQU5 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G001670 PE=4 SV=1)
HSP 1 Score: 141.7 bits (356), Expect = 4.4e-30
Identity = 151/479 (31.52%), Postives = 191/479 (39.87%), Query Frame = 0
Query: 1 MEPPPSRRRPNTQRPPPQNNQRPPSPRNESTISLQRVASSSRAAISKGKRPITQSSVPSP 60
MEPPP R+RP +R PP NNQ N S Q VASSS S+ + P +QSS PSP
Sbjct: 1 MEPPPDRQRPPNERQPPPNNQ-----NNSSLKPPQSVASSSGTTPSRKEFP-SQSSAPSP 60
Query: 61 MSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSL-PTPSSTLLRPFGNTTRNRRPAS- 120
MSAENY MD+QFE VSRR+QGSA+RTLTIQ+ SSL P PS+ LLRP G TT N+R AS
Sbjct: 61 MSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 120
Query: 121 ------------------------------------------------------------ 180
Sbjct: 121 GASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQ 180
Query: 181 ---------------SRHF------------------KTDGSE------ESFLVLSNRQA 240
+R F K D S+ F VL+
Sbjct: 181 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 240
Query: 241 K-----GKKLTATFQPQTYNYRDYMKAWYVVFWLQA------------------------ 270
K G+K + +F+ +YNYRDY KAWY+VFWL A
Sbjct: 241 KQGMFVGRKFSHSFKQPSYNYRDYTKAWYIVFWLHAYNHFWFVTFCKQAYKMHFPNWFQN 300
BLAST of Moc04g09470 vs. ExPASy TrEMBL
Match:
A0A5D3DX32 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003460 PE=4 SV=1)
HSP 1 Score: 141.4 bits (355), Expect = 5.7e-30
Identity = 151/479 (31.52%), Postives = 191/479 (39.87%), Query Frame = 0
Query: 1 MEPPPSRRRPNTQRPPPQNNQRPPSPRNESTISLQRVASSSRAAISKGKRPITQSSVPSP 60
MEPPP R+RP +R PP NNQ N S Q VASSS S+ + P +QSS PSP
Sbjct: 1 MEPPPDRQRPPNERQPPPNNQ-----NNSSLKPPQSVASSSGTTPSRKEFP-SQSSAPSP 60
Query: 61 MSAENYVMDIQFETVSRRQQGSAQRTLTIQTGPSSL-PTPSSTLLRPFGNTTRNRRPAS- 120
MSAENY MD+QFE VSRR+QGSA+RTLTIQ+ SSL P PS+ LLRP G TT N+R AS
Sbjct: 61 MSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTELLRPSGPTTPNKRAASP 120
Query: 121 ------------------------------------------------------------ 180
Sbjct: 121 GASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQ 180
Query: 181 ---------------SRHF------------------KTDGSE------ESFLVLSNRQA 240
+R F K D S+ F VL+
Sbjct: 181 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 240
Query: 241 K-----GKKLTATFQPQTYNYRDYMKAWYVVFWLQA------------------------ 270
K G+K + +F+ +YNYRDY KAWY+VFWL A
Sbjct: 241 KQGMFVGRKFSHSFKQPSYNYRDYTKAWYIVFWLHAYNHFWFVTFCKQAYKMHFPNWFQN 300
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7U7T9 | 1.0e-31 | 36.10 | Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00530 PE... | [more] |
A0A5A7U3G5 | 2.0e-30 | 31.80 | Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00490 PE... | [more] |
A0A5A7TBK1 | 4.4e-30 | 30.64 | Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
A0A5A7SQU5 | 4.4e-30 | 31.52 | Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
A0A5D3DX32 | 5.7e-30 | 31.52 | Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
Match Name | E-value | Identity | Description | |