Moc04g06790 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAACCTTCGACGGTGAAATCTTTGACTTGAAAGCTCCGAAGAAGACTGAAACTGACCCCACTTTCATTGACTGGACGAGTGGAATGAGGGAAAGCGGCTCGATCGACAAAAAAGAAGAAGGAACCCCTAGAACCTGGAAAAGTCATGAATTCCCAAGCAATTCTAAACCAACATATGCGATTCATTCCCGTAAAGTATCTACAGGACATATGGCCGAGCAGGATGGCTTTGCTTAA ATGCTAACCTTCGACGGTGAAATCTTTGACTTGAAAGCTCCGAAGAAGACTGAAACTGACCCCACTTTCATTGACTGGACGAGTGGAATGAGGGAAAGCGGCTCGATCGACAAAAAAGAAGAAGGAACCCCTAGAACCTGGAAAAGTCATGAATTCCCAAGCAATTCTAAACCAACATATGCGATTCATTCCCGTAAAGTATCTACAGGACATATGGCCGAGCAGGATGGCTTTGCTTAA ATGCTAACCTTCGACGGTGAAATCTTTGACTTGAAAGCTCCGAAGAAGACTGAAACTGACCCCACTTTCATTGACTGGACGAGTGGAATGAGGGAAAGCGGCTCGATCGACAAAAAAGAAGAAGGAACCCCTAGAACCTGGAAAAGTCATGAATTCCCAAGCAATTCTAAACCAACATATGCGATTCATTCCCGTAAAGTATCTACAGGACATATGGCCGAGCAGGATGGCTTTGCTTAA MLTFDGEIFDLKAPKKTETDPTFIDWTSGMRESGSIDKKEEGTPRTWKSHEFPSNSKPTYAIHSRKVSTGHMAEQDGFA Homology
BLAST of Moc04g06790 vs. NCBI nr
Match: KAF3452197.1 (hypothetical protein FNV43_RR08295 [Rhamnella rubrinervis]) HSP 1 Score: 58.2 bits (139), Expect = 3.8e-05 Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 0
BLAST of Moc04g06790 vs. NCBI nr
Match: KAF3452142.1 (hypothetical protein FNV43_RR08240 [Rhamnella rubrinervis]) HSP 1 Score: 58.2 bits (139), Expect = 3.8e-05 Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 0
BLAST of Moc04g06790 vs. NCBI nr
Match: YP_009477475.1 (transport membrane protein, partial [Citrus sinensis] >AVW89059.1 transport membrane protein, partial [Citrus sinensis]) HSP 1 Score: 55.5 bits (132), Expect = 2.5e-04 Identity = 29/45 (64.44%), Postives = 33/45 (73.33%), Query Frame = 0
BLAST of Moc04g06790 vs. NCBI nr
Match: KAF9608887.1 (hypothetical protein IFM89_011925 [Coptis chinensis]) HSP 1 Score: 54.7 bits (130), Expect = 4.2e-04 Identity = 29/43 (67.44%), Postives = 32/43 (74.42%), Query Frame = 0
BLAST of Moc04g06790 vs. NCBI nr
Match: QKE23886.1 (SecY-independent membrane transporter protein [Scutellaria amoena]) HSP 1 Score: 53.9 bits (128), Expect = 7.2e-04 Identity = 30/46 (65.22%), Postives = 33/46 (71.74%), Query Frame = 0
BLAST of Moc04g06790 vs. ExPASy TrEMBL
Match: A0A2R4LW69 (Transport membrane protein (Fragment) OS=Citrus sinensis OX=2711 GN=mttB PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.2e-04 Identity = 29/45 (64.44%), Postives = 33/45 (73.33%), Query Frame = 0
BLAST of Moc04g06790 vs. ExPASy TrEMBL
Match: A0A6M8E2W9 (SecY-independent membrane transporter protein OS=Scutellaria amoena OX=1052904 GN=mttB PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.5e-04 Identity = 30/46 (65.22%), Postives = 33/46 (71.74%), Query Frame = 0
BLAST of Moc04g06790 vs. ExPASy TrEMBL
Match: A0A699JM43 (Transport membrane protein, mitochondrial OS=Tanacetum cinerariifolium OX=118510 GN=Tci_617495 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.6e-04 Identity = 30/47 (63.83%), Postives = 32/47 (68.09%), Query Frame = 0
BLAST of Moc04g06790 vs. ExPASy TrEMBL
Match: A0A1B1LND9 (Sec-independent protein translocase OS=Cynomorium coccineum OX=51503 GN=tatC PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 7.8e-04 Identity = 29/42 (69.05%), Postives = 31/42 (73.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|