Moc04g03960 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g03960
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Pentatricopeptide repeat (PPR) superfamily protein
Location	chr4: 2493735 .. 2496435 (+)
RNA-Seq Expression	Moc04g03960
Synteny	Moc04g03960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCCATGGTGAAAAAGTATCAGCAGAGATTCAGAAAGTTTAAGGACGAAATGGATCGCTGGGACGAGCTCCAAGTTTGCTTAATTTCGCTGTTCAGAAACGCTTCCTTCATCATCGGGAGGTTGCAGGTCAGTCTTAGTTCTTATTTAGCTATACGTATAAATATTTTTTTTCAATTGTAAATTCAGTACTAGAATCTTCAAAAAGTTGATTGTCAGATGCTTCAAGACTCTAAGAATTATGGCAGTCTGTCCGGCATAGATGGCATTGTAGACGCGCTATTGGCGAAGCAGATGGAATCCTTGCAACTTAATTTCTCGTCTATTGAAAAAACAATGTAAGTTTGTGTTCGTTTCGGTTTCTTTTCTTGCTTCTTCTGCGTGTGGTTGGTAGGATATGCTAGAAAACGAATCGGATAAAATTAGAATGTACAACTCCGTATTTGTCCGAGTTGTTATTCGATCCGATTTTTGTAGTAGATGCAGGCCAGCAGTTATTGGTAGGCCGACAATTGCTTTCTAAAAAGTCGAATGCTTAGGTTATGGCGACTGTTTCCAAGGCGGTTTCTTCTTTTTCAGATTAAAAATCGAGCGTATATCTATTTAGTAACTCTTCCTTTTGTACTTTTTCTTGTTTTACTTGAGTGTATTTTCGAGTAAAGTAGTTTCTGGGTTTGTAGATAATTGATTTGTGCAGAATAATAGTAACTTTGATCATTCAACATAGTTCGTATAAATAATATTGGAAACGAAAATATAAGATGGTCTTGGAAACAGTCCAAAGGATCCCTTAAAATTCTTCTGCTATCTAGTTTTCATCAACGAAGAATCTGAACAAATATCTCAGGGAAGAACTTGGGAATGTTGTCCGATCGATGGAGAAGATTTATCGTGATGGGAAGCAATTAGTCAAAGGTGGTTCCAATCAGCCATCAATAAAACAACTACAGCAAAGAGTTGGTTTAAAACCCAGTATTGAAGATTGCTTGAATGGGTTAATGCTTCTATGCGACATGCACCGCACTGAGTAAGAATTTATCTGATCTCGTTTTATGTGATGAAATCAAGTTTGTCAAAAAGATGTGTATTCCACAGAGAAGATAATTAGTCACTTCAAAGTATTTAGTCCATATTGTTGAACATTGATCTAACTTGAGTTACTGAGGACATTTTCCTTGTTTCACTTTAATGAACTTGTATTTGTTCCAAACACCTGGATTTATCTGCTTCTGCTTCCTCAATCTGATGGAAGCGCCTTAATCATGGGGACAATGATATTTTTCTTGTCTAAGCAGTATAGATCAGAAACTGATTGTGTTAGCAGAAAATCAACTACATATGAAAGTCAGATTTATATCAATTATGTTGGCTTCTTTATTTGTTGTTCCCTTTTCTAAAAAAATACGTGATATTTTTATTGATTTCTTAATTATATATTCTGATCGAAGCTTATGTTATGATACCTACATTTATGCTGTACATGCACGGACTGTATTATTTGCCCAACTTGTAATTTTTGTATTTCACTGTTTTTTTCCAATAGATTAACTTTATCATCCCATTTGCCAAGTTCTTGAGTGAATGTGTTGATCGGCTTTTAATGGACCTGTTTCAATTTCTTTAGGTACCATCTTAAAGAATCTGTGGTCTCAGCACTTCCCAAACTTTTCTGGAAAGCCAGGTAACTTTTTTCACCTCAGTAATTTCATATCTTAAAATGATTAGGTGGGATGAAACTTCTAATTGTAATTAAAGCACCAACGAAATTGTTCATGTCAAGAAACACTTGTTTTGGAACTTCAATTTCCTTTGATATTTGTATATGCAATATCCTTTTCTCACAATGCGCTGAATGACTTCATACATTATTATTTTTTCGTTTTCTCATCTTATACGTTCCCCCCTTATTATGTTATTACTATGGTCATTTGTTCCCCTCTGAAAAATATTTGCTCTTCTTTAATTGTTAGTAATCACAGTGCCCAAGATCTCAGTTCCTTGCAGCAACTTTTGATAGATCAGCCTAACATCCAGAAAGAGGAAGGTTAGTGATGAATAATTTTTTCAGCACTTTTATTGATGAATGTGTAATTATTAAGTCGAGAAGTATCAAATTATGGAATCAAAAGAACCACGTTTTCAAATGGGTTTTAGCAAATGTTGTTGTCCCCAAGAAAATGTCAACCTTCCATTCAATTCTAGGTCCAAAGTTTGCTTTTACTTCCATTATCTAATGGCTTGTTGTGTCATGGACCATTTTTTTGGCTTTTCCCAACTTATTATGAAGCACTATCTTGAAGTAGTTGTGTGGTCCTGGCTTTCAAGTGTCCATTTGCCATTGCAGAGGCAAATCTTGCCTTTTCCCTTATCTATGGACTATGGTGTCTTTTGTTGGATTTGAAATCTCATGTTCCGTACTTTCTTCAGTTTTATTGTTCTGCACTTTCCCTTCAATATACGACAAGTAGCGCTTTCAACTTGGCTCTTTCTCTTGAGGTTGAAGGTTCAAATCCCTGTACCCCAATTTGTTGTACTAAAACAAAACAAGAACATTGAAGAGGATAAGTAACAATATTTTAGTCTACATAGTGTATTGATTTTGTCGTGGTATTTTCACATTACAAATTGACTTAATTCTCGTTCCTCTTTTATTGCAGTTGAATTCGTCTTTGATACCATACTGGTCGTGGAAGCCTAG

mRNA sequence

ATGGAGGCCATGGTGAAAAAGTATCAGCAGAGATTCAGAAAGTTTAAGGACGAAATGGATCGCTGGGACGAGCTCCAAGTTTGCTTAATTTCGCTGTTCAGAAACGCTTCCTTCATCATCGGGAGGTTGCAGATGCTTCAAGACTCTAAGAATTATGGCAGTCTGTCCGGCATAGATGGCATTGTAGACGCGCTATTGGCGAAGCAGATGGAATCCTTGCAACTTAATTTCTCGTCTATTGAAAAAACAATGGAAGAACTTGGGAATGTTGTCCGATCGATGGAGAAGATTTATCGTGATGGGAAGCAATTAGTCAAAGGTGGTTCCAATCAGCCATCAATAAAACAACTACAGCAAAGAGTTGGTTTAAAACCCAGTATTGAAGATTGCTTGAATGGGTTAATGCTTCTATGCGACATGCACCGCACTGAGTACCATCTTAAAGAATCTGTGGTCTCAGCACTTCCCAAACTTTTCTGGAAAGCCAGTAATCACAGTGCCCAAGATCTCAGTTCCTTGCAGCAACTTTTGATAGATCAGCCTAACATCCAGAAAGAGGAAGTTGAATTCGTCTTTGATACCATACTGGTCGTGGAAGCCTAG

Coding sequence (CDS)

ATGGAGGCCATGGTGAAAAAGTATCAGCAGAGATTCAGAAAGTTTAAGGACGAAATGGATCGCTGGGACGAGCTCCAAGTTTGCTTAATTTCGCTGTTCAGAAACGCTTCCTTCATCATCGGGAGGTTGCAGATGCTTCAAGACTCTAAGAATTATGGCAGTCTGTCCGGCATAGATGGCATTGTAGACGCGCTATTGGCGAAGCAGATGGAATCCTTGCAACTTAATTTCTCGTCTATTGAAAAAACAATGGAAGAACTTGGGAATGTTGTCCGATCGATGGAGAAGATTTATCGTGATGGGAAGCAATTAGTCAAAGGTGGTTCCAATCAGCCATCAATAAAACAACTACAGCAAAGAGTTGGTTTAAAACCCAGTATTGAAGATTGCTTGAATGGGTTAATGCTTCTATGCGACATGCACCGCACTGAGTACCATCTTAAAGAATCTGTGGTCTCAGCACTTCCCAAACTTTTCTGGAAAGCCAGTAATCACAGTGCCCAAGATCTCAGTTCCTTGCAGCAACTTTTGATAGATCAGCCTAACATCCAGAAAGAGGAAGTTGAATTCGTCTTTGATACCATACTGGTCGTGGAAGCCTAG

Protein sequence

MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDGIVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQRVGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQPNIQKEEVEFVFDTILVVEA

Homology

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BLAST of Moc04g03960 vs. NCBI nr
Match: XP_022136277.1 (uncharacterized protein At5g43822 isoform X1 [Momordica charantia])

HSP 1 Score: 389.8 bits (1000), Expect = 1.4e-104
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG 60

Query: 61  IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR
Sbjct: 61  IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ 180
           VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ
Sbjct: 121 VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ 180

Query: 181 PNIQKEEVEFVFDTILVVEA 201
           PNIQKEEVEFVFDTILVVEA
Sbjct: 181 PNIQKEEVEFVFDTILVVEA 200

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BLAST of Moc04g03960 vs. NCBI nr
Match: XP_022136279.1 (uncharacterized protein At5g43822 isoform X3 [Momordica charantia])

HSP 1 Score: 377.5 bits (968), Expect = 7.2e-101
Identity = 197/200 (98.50%), Postives = 197/200 (98.50%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG 60

Query: 61  IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR
Sbjct: 61  IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ 180
           VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKA   SAQDLSSLQQLLIDQ
Sbjct: 121 VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKA---SAQDLSSLQQLLIDQ 180

Query: 181 PNIQKEEVEFVFDTILVVEA 201
           PNIQKEEVEFVFDTILVVEA
Sbjct: 181 PNIQKEEVEFVFDTILVVEA 197

[Close]

BLAST of Moc04g03960 vs. NCBI nr
Match: XP_022136278.1 (uncharacterized protein At5g43822 isoform X2 [Momordica charantia])

HSP 1 Score: 369.0 bits (946), Expect = 2.6e-98
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG 60

Query: 61  IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR
Sbjct: 61  IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ 180
           VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ
Sbjct: 121 VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ 180

Query: 181 PNIQKEEV 189
           PNIQKEEV
Sbjct: 181 PNIQKEEV 188

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BLAST of Moc04g03960 vs. NCBI nr
Match: XP_022928127.1 (uncharacterized protein At5g43822 isoform X3 [Cucurbita moschata])

HSP 1 Score: 345.9 bits (886), Expect = 2.3e-91
Identity = 176/200 (88.00%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQV LIS F NAS IIGRLQ+LQD  NYGSLSG+DG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFTNASSIIGRLQVLQDPNNYGSLSGMDG 60

Query: 61  IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IVDALLAKQMESLQL FSSI KTMEELGN+VRSMEKIYRDGKQL+KGGSNQPS KQLQQR
Sbjct: 61  IVDALLAKQMESLQLVFSSIIKTMEELGNIVRSMEKIYRDGKQLIKGGSNQPSTKQLQQR 120

Query: 121 VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ 180
           VGLKPS+EDCLNGL LLCDMHR+EYHLKES+VSALP+LFWK  NHSAQDLSSLQQLL+DQ
Sbjct: 121 VGLKPSLEDCLNGLRLLCDMHRSEYHLKESMVSALPELFWKPRNHSAQDLSSLQQLLVDQ 180

Query: 181 PNIQKEEVEFVFDTILVVEA 201
           PNI+KEEVEF+FDTILV EA
Sbjct: 181 PNIRKEEVEFIFDTILVPEA 200

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BLAST of Moc04g03960 vs. NCBI nr
Match: XP_004144893.1 (uncharacterized protein At5g43822 isoform X2 [Cucumis sativus] >KGN43347.1 hypothetical protein Csa_020516 [Cucumis sativus])

HSP 1 Score: 345.9 bits (886), Expect = 2.3e-91
Identity = 174/200 (87.00%), Postives = 191/200 (95.50%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQV LIS F+NAS IIGRLQ+LQD KN+GSLSG+DG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IV+ALLAKQMESLQL+FSSI+KTMEELGN+V SMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120

Query: 121 VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ 180
           VGLKPS+EDCLNGLMLLC MHR+EY+LKES+VSALP+LFWKA NH AQDLSSL QLL+DQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIQKEEVEFVFDTILVVEA 201
           PNI+KEEVEFVFDTILV+EA
Sbjct: 181 PNIKKEEVEFVFDTILVLEA 200

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BLAST of Moc04g03960 vs. ExPASy Swiss-Prot
Match: Q6NPG7 (Uncharacterized protein At5g43822 OS=Arabidopsis thaliana OX=3702 GN=At5g43822 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.5e-43
Identity = 94/199 (47.24%), Postives = 140/199 (70.35%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG 60
           MEA+++K+QQ+FRK K+EM++W+ LQV  +SLFRNAS II RLQ +Q+  +YG+L  + G
Sbjct: 1   MEAVIRKWQQKFRKGKEEMEKWEALQVRWVSLFRNASSIIQRLQEMQNHGSYGALRCLKG 60

Query: 61  IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           I DA++ +QM  L+    S++  MEE    V + EK++RDG QL +  S++   +++++R
Sbjct: 61  IEDAVVQQQMGQLESLLRSMKNVMEEFWGCVLTFEKLHRDGLQLREIESSK---RRVEER 120

Query: 121 VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ 180
           +G+KP I DCL GL +L DMH++EYHLK S++S L  L  K    S  DL++LQ L++DQ
Sbjct: 121 IGVKPCITDCLEGLSILYDMHQSEYHLKSSILSVLSCLILKP---SPGDLNALQYLVVDQ 180

Query: 181 PNIQKEEVEFVFDTILVVE 200
           PNI K+EV+ +FD I   E
Sbjct: 181 PNIPKDEVQHIFDVIFAEE 193

[Close]

BLAST of Moc04g03960 vs. ExPASy TrEMBL
Match: A0A6J1C552 (uncharacterized protein At5g43822 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008010 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 6.8e-105
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG 60

Query: 61  IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR
Sbjct: 61  IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ 180
           VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ
Sbjct: 121 VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ 180

Query: 181 PNIQKEEVEFVFDTILVVEA 201
           PNIQKEEVEFVFDTILVVEA
Sbjct: 181 PNIQKEEVEFVFDTILVVEA 200

[Close]

BLAST of Moc04g03960 vs. ExPASy TrEMBL
Match: A0A6J1C3W3 (uncharacterized protein At5g43822 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111008010 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 3.5e-101
Identity = 197/200 (98.50%), Postives = 197/200 (98.50%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG 60

Query: 61  IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR
Sbjct: 61  IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ 180
           VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKA   SAQDLSSLQQLLIDQ
Sbjct: 121 VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKA---SAQDLSSLQQLLIDQ 180

Query: 181 PNIQKEEVEFVFDTILVVEA 201
           PNIQKEEVEFVFDTILVVEA
Sbjct: 181 PNIQKEEVEFVFDTILVVEA 197

[Close]

BLAST of Moc04g03960 vs. ExPASy TrEMBL
Match: A0A6J1C781 (uncharacterized protein At5g43822 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008010 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.2e-98
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG 60

Query: 61  IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR
Sbjct: 61  IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ 180
           VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ
Sbjct: 121 VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ 180

Query: 181 PNIQKEEV 189
           PNIQKEEV
Sbjct: 181 PNIQKEEV 188

[Close]

BLAST of Moc04g03960 vs. ExPASy TrEMBL
Match: A0A0A0K4X9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G025190 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.1e-91
Identity = 174/200 (87.00%), Postives = 191/200 (95.50%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQV LIS F+NAS IIGRLQ+LQD KN+GSLSG+DG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IV+ALLAKQMESLQL+FSSI+KTMEELGN+V SMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120

Query: 121 VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ 180
           VGLKPS+EDCLNGLMLLC MHR+EY+LKES+VSALP+LFWKA NH AQDLSSL QLL+DQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIQKEEVEFVFDTILVVEA 201
           PNI+KEEVEFVFDTILV+EA
Sbjct: 181 PNIKKEEVEFVFDTILVLEA 200

[Close]

BLAST of Moc04g03960 vs. ExPASy TrEMBL
Match: A0A6J1EJ12 (uncharacterized protein At5g43822 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111435044 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.1e-91
Identity = 176/200 (88.00%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQV LIS F NAS IIGRLQ+LQD  NYGSLSG+DG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFTNASSIIGRLQVLQDPNNYGSLSGMDG 60

Query: 61  IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IVDALLAKQMESLQL FSSI KTMEELGN+VRSMEKIYRDGKQL+KGGSNQPS KQLQQR
Sbjct: 61  IVDALLAKQMESLQLVFSSIIKTMEELGNIVRSMEKIYRDGKQLIKGGSNQPSTKQLQQR 120

Query: 121 VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ 180
           VGLKPS+EDCLNGL LLCDMHR+EYHLKES+VSALP+LFWK  NHSAQDLSSLQQLL+DQ
Sbjct: 121 VGLKPSLEDCLNGLRLLCDMHRSEYHLKESMVSALPELFWKPRNHSAQDLSSLQQLLVDQ 180

Query: 181 PNIQKEEVEFVFDTILVVEA 201
           PNI+KEEVEF+FDTILV EA
Sbjct: 181 PNIRKEEVEFIFDTILVPEA 200

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BLAST of Moc04g03960 vs. TAIR 10
Match: AT5G43822.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 175.6 bits (444), Expect = 3.9e-44
Identity = 94/199 (47.24%), Postives = 140/199 (70.35%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG 60
           MEA+++K+QQ+FRK K+EM++W+ LQV  +SLFRNAS II RLQ +Q+  +YG+L  + G
Sbjct: 1   MEAVIRKWQQKFRKGKEEMEKWEALQVRWVSLFRNASSIIQRLQEMQNHGSYGALRCLKG 60

Query: 61  IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           I DA++ +QM  L+    S++  MEE    V + EK++RDG QL +  S++   +++++R
Sbjct: 61  IEDAVVQQQMGQLESLLRSMKNVMEEFWGCVLTFEKLHRDGLQLREIESSK---RRVEER 120

Query: 121 VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ 180
           +G+KP I DCL GL +L DMH++EYHLK S++S L  L  K    S  DL++LQ L++DQ
Sbjct: 121 IGVKPCITDCLEGLSILYDMHQSEYHLKSSILSVLSCLILKP---SPGDLNALQYLVVDQ 180

Query: 181 PNIQKEEVEFVFDTILVVE 200
           PNI K+EV+ +FD I   E
Sbjct: 181 PNIPKDEVQHIFDVIFAEE 193

The following BLAST results are available for this feature:

BLAST of Moc04g03960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136277.1	1.4e-104	100.00	uncharacterized protein At5g43822 isoform X1 [Momordica charantia]	[more]
XP_022136279.1	7.2e-101	98.50	uncharacterized protein At5g43822 isoform X3 [Momordica charantia]	[more]
XP_022136278.1	2.6e-98	100.00	uncharacterized protein At5g43822 isoform X2 [Momordica charantia]	[more]
XP_022928127.1	2.3e-91	88.00	uncharacterized protein At5g43822 isoform X3 [Cucurbita moschata]	[more]
XP_004144893.1	2.3e-91	87.00	uncharacterized protein At5g43822 isoform X2 [Cucumis sativus] >KGN43347.1 hypot...	[more]

BLAST of Moc04g03960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NPG7	5.5e-43	47.24	Uncharacterized protein At5g43822 OS=Arabidopsis thaliana OX=3702 GN=At5g43822 P...	[more]

BLAST of Moc04g03960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C552	6.8e-105	100.00	uncharacterized protein At5g43822 isoform X1 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1C3W3	3.5e-101	98.50	uncharacterized protein At5g43822 isoform X3 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1C781	1.2e-98	100.00	uncharacterized protein At5g43822 isoform X2 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A0A0K4X9	1.1e-91	87.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G025190 PE=4 SV=1	[more]
A0A6J1EJ12	1.1e-91	88.00	uncharacterized protein At5g43822 isoform X3 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Moc04g03960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43822.1	3.9e-44	47.24	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 5..25
None	No IPR available	PANTHER	PTHR37904:SF2	OS10G0566900 PROTEIN	coord: 1..197
IPR029159	Casein Kinase 2 substrate	PFAM	PF15011	CK2S	coord: 7..167 e-value: 9.6E-44 score: 149.2
IPR038985	At5g43822-like	PANTHER	PTHR37904	OS10G0566900 PROTEIN	coord: 1..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g03960.1	Moc04g03960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005635	nuclear envelope