Moc04g03340 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g03340
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	chr4: 2087072 .. 2088143 (+)
RNA-Seq Expression	Moc04g03340
Synteny	Moc04g03340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCTCTGCCATCCAACAGTCTGCCTTTGCCGGCCAGCCTGCCTTGAAGCAGTCCAATGAGCTCGTCCGGAGGGTTGGCGCTGTCGGTGGCGGCCGCTTCACCATGCGCCGAACTGTCAAGAGTGCTCCACAAAGCATATGGTTAATCTCCCTTCCCTAAGCTCCACATATTCACTTTAACTGTTAAAATATCAGAGCCCTGATGTTTTTTCTGCATCTTCATGCTAGTAGTAGCTTGGCCATTTTTGCTATGTGCTGTAAAATATGGTGTTTTCCTGCATATTGGACATGATGAGTTAAGAAAAAGATCAGTTCATTCAACACAGACCCCATTATAAGATGTTAGTTAAGTAGGAAGATTTAATTTCCATACACACTAGGCTTGAAATTCAAATGCCTGTTTTTGATGAAACAGGTACGGCCCAGACCGCCCAAAATACTTGGGACCATTCTCTGAACAAACACCATCTTACCTGACTGGAGAGTTCCCTGGTGACTACGGATGGGATACGGCCGGTCTATCAGCAGATCCCGAGACTTTTGCGAAGAACCGTGAGCTTGAGGTGATCCACTCCCGATGGGCCATGCTTGGTGCATTAGGTTGTGTCTTCCCTGAAATCCTTGCAAAGAATGGTGTCCAGTTTGGTGAATCAGTTTGGTTCAAGGCTGGTTCTCAGATCTTCTCTGAGGGTGGTCTTGATTATTTGGGCAACCCCAACCTCATCCATGCCCAGAGTATCCTTGCAATCTGGGCTTGCCAGGTTGTGCTTATGGGCTTTGTCGAAGGTTACCGGGTTGGTGGCGGTCCCCTCGGTGAAGGACTCGACCCAATTTACCCTGGAGGTTCCTTCGACCCACTTGGATTGGCAGATGACCCAGATGCATTTGCTGAGTTGAAGGTGAAGGAACTAAAGAATGGACGCCTCGCAATGTTCTCCATGTTTGGATTCTTCGTTCAGGCTATTGTCACGGGAAAAGGTCCGATTGAGAATCTCTTAGACCACATCGCAGATCCTGTTGCCAACAACGCATGGGCTTACGCCACCAACTTTGTCCCCGGAAAATGA

mRNA sequence

ATGGCCACCTCTGCCATCCAACAGTCTGCCTTTGCCGGCCAGCCTGCCTTGAAGCAGTCCAATGAGCTCGTCCGGAGGGTTGGCGCTGTCGGTGGCGGCCGCTTCACCATGCGCCGAACTGTCAAGAGTGCTCCACAAAGCATATGGTACGGCCCAGACCGCCCAAAATACTTGGGACCATTCTCTGAACAAACACCATCTTACCTGACTGGAGAGTTCCCTGGTGACTACGGATGGGATACGGCCGGTCTATCAGCAGATCCCGAGACTTTTGCGAAGAACCGTGAGCTTGAGGTGATCCACTCCCGATGGGCCATGCTTGGTGCATTAGGTTGTGTCTTCCCTGAAATCCTTGCAAAGAATGGTGTCCAGTTTGGTGAATCAGTTTGGTTCAAGGCTGGTTCTCAGATCTTCTCTGAGGGTGGTCTTGATTATTTGGGCAACCCCAACCTCATCCATGCCCAGAGTATCCTTGCAATCTGGGCTTGCCAGGTTGTGCTTATGGGCTTTGTCGAAGGTTACCGGGTTGGTGGCGGTCCCCTCGGTGAAGGACTCGACCCAATTTACCCTGGAGGTTCCTTCGACCCACTTGGATTGGCAGATGACCCAGATGCATTTGCTGAGTTGAAGGTGAAGGAACTAAAGAATGGACGCCTCGCAATGTTCTCCATGTTTGGATTCTTCGTTCAGGCTATTGTCACGGGAAAAGGTCCGATTGAGAATCTCTTAGACCACATCGCAGATCCTGTTGCCAACAACGCATGGGCTTACGCCACCAACTTTGTCCCCGGAAAATGA

Coding sequence (CDS)

ATGGCCACCTCTGCCATCCAACAGTCTGCCTTTGCCGGCCAGCCTGCCTTGAAGCAGTCCAATGAGCTCGTCCGGAGGGTTGGCGCTGTCGGTGGCGGCCGCTTCACCATGCGCCGAACTGTCAAGAGTGCTCCACAAAGCATATGGTACGGCCCAGACCGCCCAAAATACTTGGGACCATTCTCTGAACAAACACCATCTTACCTGACTGGAGAGTTCCCTGGTGACTACGGATGGGATACGGCCGGTCTATCAGCAGATCCCGAGACTTTTGCGAAGAACCGTGAGCTTGAGGTGATCCACTCCCGATGGGCCATGCTTGGTGCATTAGGTTGTGTCTTCCCTGAAATCCTTGCAAAGAATGGTGTCCAGTTTGGTGAATCAGTTTGGTTCAAGGCTGGTTCTCAGATCTTCTCTGAGGGTGGTCTTGATTATTTGGGCAACCCCAACCTCATCCATGCCCAGAGTATCCTTGCAATCTGGGCTTGCCAGGTTGTGCTTATGGGCTTTGTCGAAGGTTACCGGGTTGGTGGCGGTCCCCTCGGTGAAGGACTCGACCCAATTTACCCTGGAGGTTCCTTCGACCCACTTGGATTGGCAGATGACCCAGATGCATTTGCTGAGTTGAAGGTGAAGGAACTAAAGAATGGACGCCTCGCAATGTTCTCCATGTTTGGATTCTTCGTTCAGGCTATTGTCACGGGAAAAGGTCCGATTGAGAATCTCTTAGACCACATCGCAGATCCTGTTGCCAACAACGCATGGGCTTACGCCACCAACTTTGTCCCCGGAAAATGA

Protein sequence

MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAKNGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLLDHIADPVANNAWAYATNFVPGK

Homology

[Close]

BLAST of Moc04g03340 vs. NCBI nr
Match: XP_022135994.1 (chlorophyll a-b binding protein 151, chloroplastic [Momordica charantia])

HSP 1 Score: 551.2 bits (1419), Expect = 4.8e-153
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLLDHIADPVANNAWAYATNFVPGK 266
           NLLDHIADPVANNAWAYATNFVPGK
Sbjct: 241 NLLDHIADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Moc04g03340 vs. NCBI nr
Match: XP_038887832.1 (chlorophyll a-b binding protein 151, chloroplastic [Benincasa hispida])

HSP 1 Score: 543.5 bits (1399), Expect = 1.0e-150
Identity = 260/265 (98.11%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAF GQ ALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFTGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGG+FDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLLDHIADPVANNAWAYATNFVPGK 266
           NL DH+ADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Moc04g03340 vs. NCBI nr
Match: XP_008462084.1 (PREDICTED: chlorophyll a-b binding protein 151, chloroplastic [Cucumis melo] >KAA0059192.1 chlorophyll a-b binding protein 151 [Cucumis melo var. makuwa] >TYK19327.1 chlorophyll a-b binding protein 151 [Cucumis melo var. makuwa])

HSP 1 Score: 539.3 bits (1388), Expect = 1.9e-149
Identity = 257/265 (96.98%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQ ALKQSNELVR+VGAVGG RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQAALKQSNELVRKVGAVGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGV+FGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGG+FDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLLDHIADPVANNAWAYATNFVPGK 266
           NL DH+ADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Moc04g03340 vs. NCBI nr
Match: XP_004144543.1 (chlorophyll a-b binding protein 151, chloroplastic [Cucumis sativus] >KGN43422.1 hypothetical protein Csa_020546 [Cucumis sativus])

HSP 1 Score: 538.1 bits (1385), Expect = 4.2e-149
Identity = 256/265 (96.60%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQ ALKQSNELVR+VGA+GG RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVRKVGALGGARFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGV+FGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGG+FDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLLDHIADPVANNAWAYATNFVPGK 266
           NL DH+ADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Moc04g03340 vs. NCBI nr
Match: XP_022928240.1 (chlorophyll a-b binding protein 151, chloroplastic [Cucurbita moschata] >XP_023529768.1 chlorophyll a-b binding protein 151, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6589102.1 Chlorophyll a-b binding protein 151, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 537.3 bits (1383), Expect = 7.2e-149
Identity = 255/265 (96.23%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQ ALKQSNELVR+VGA GG RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGV+FGESVWFKAGSQIFSEGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGG+FDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLLDHIADPVANNAWAYATNFVPGK 266
           NL DH+ADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Moc04g03340 vs. ExPASy Swiss-Prot
Match: P27518 (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum OX=3635 GN=CAB-151 PE=2 SV=2)

HSP 1 Score: 523.5 bits (1347), Expect = 1.4e-147
Identity = 248/265 (93.58%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQ ALKQSNELV ++GAVGGGR +MRRTVKSAP SIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FS+Q PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEIL+K
Sbjct: 61  FSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGV+FGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGG+FDPLGLADDPDAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLLDHIADPVANNAWAYATNFVPGK 266
           NL DH+ADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHLADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Moc04g03340 vs. ExPASy Swiss-Prot
Match: P12062 (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. OX=4104 GN=CAB37 PE=3 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 3.3e-144
Identity = 243/265 (91.70%), Postives = 254/265 (95.85%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQ ALK  NELVR++G+ GGGR TMRRTVKSAPQSIWYG DRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEIL+K
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGV FGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGFVEGYRVGGGP
Sbjct: 121 NGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLD IYPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLLDHIADPVANNAWAYATNFVPGK 266
           NL DH+ADPVANNAWA+ATNFVPGK
Sbjct: 241 NLYDHVADPVANNAWAFATNFVPGK 265

[Close]

BLAST of Moc04g03340 vs. ExPASy Swiss-Prot
Match: P27494 (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB36 PE=3 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 6.2e-143
Identity = 239/265 (90.19%), Postives = 253/265 (95.47%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAI+QSAFAGQ ALK  NELVR++G+  GGR TMRRTVKSAPQSIWYG DRPKYLGP
Sbjct: 1   MATSAIEQSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEIL+K
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGV+FGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILA+WA QVVLMG +EGYRVGGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLD IYPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLLDHIADPVANNAWAYATNFVPGK 266
           NL DH+ADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Moc04g03340 vs. ExPASy Swiss-Prot
Match: Q9SHR7 (Chlorophyll a-b binding protein 2.1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB2.1 PE=1 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 1.4e-142
Identity = 237/264 (89.77%), Postives = 253/264 (95.83%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQS+FAGQ ALK SNEL+R+VG  GGGR TMRRTVKS PQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSSFAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPEIL+K
Sbjct: 61  FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGV+FGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGF+EGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGP 180

Query: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDP+YPGG+FDPL LA+DP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLLDHIADPVANNAWAYATNFVPG 265
           NL DH+ADPVANNAW+YATNFVPG
Sbjct: 241 NLFDHLADPVANNAWSYATNFVPG 264

[Close]

BLAST of Moc04g03340 vs. ExPASy Swiss-Prot
Match: Q9S7J7 (Chlorophyll a-b binding protein 2.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB2.2 PE=1 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 1.8e-142
Identity = 235/265 (88.68%), Postives = 255/265 (96.23%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQS+FAGQ ALK S++L+++VG +GGGR TMRRTVKS PQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSSFAGQTALKPSSDLIQKVGVLGGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPEIL+K
Sbjct: 61  FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGV+FGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGF+EGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGP 180

Query: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDP+YPGG+FDPL LA+DP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLLDHIADPVANNAWAYATNFVPGK 266
           NL DH+ADPVANNAW+YATNFVPGK
Sbjct: 241 NLFDHLADPVANNAWSYATNFVPGK 265

[Close]

BLAST of Moc04g03340 vs. ExPASy TrEMBL
Match: A0A6J1C312 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007803 PE=3 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 2.3e-153
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLLDHIADPVANNAWAYATNFVPGK 266
           NLLDHIADPVANNAWAYATNFVPGK
Sbjct: 241 NLLDHIADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Moc04g03340 vs. ExPASy TrEMBL
Match: A0A5D3D6Y9 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold295G00480 PE=3 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 9.2e-150
Identity = 257/265 (96.98%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQ ALKQSNELVR+VGAVGG RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQAALKQSNELVRKVGAVGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGV+FGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGG+FDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLLDHIADPVANNAWAYATNFVPGK 266
           NL DH+ADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Moc04g03340 vs. ExPASy TrEMBL
Match: A0A1S3CG37 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500523 PE=3 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 9.2e-150
Identity = 257/265 (96.98%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQ ALKQSNELVR+VGAVGG RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQAALKQSNELVRKVGAVGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGV+FGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGG+FDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLLDHIADPVANNAWAYATNFVPGK 266
           NL DH+ADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Moc04g03340 vs. ExPASy TrEMBL
Match: A0A0A0K565 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_7G033300 PE=3 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 2.1e-149
Identity = 256/265 (96.60%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQ ALKQSNELVR+VGA+GG RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVRKVGALGGARFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGV+FGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGG+FDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLLDHIADPVANNAWAYATNFVPGK 266
           NL DH+ADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Moc04g03340 vs. ExPASy TrEMBL
Match: A0A6J1JQB2 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486503 PE=3 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 3.5e-149
Identity = 255/265 (96.23%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQPALKQSNELVR+VGA GG RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQPALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGV+FGESVWFKAGSQIFSEGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGG+FDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLLDHIADPVANNAWAYATNFVPGK 266
           NL DH+ADPVANNAWAYATNFVP K
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPRK 265

[Close]

BLAST of Moc04g03340 vs. TAIR 10
Match: AT2G05100.1 (photosystem II light harvesting complex gene 2.1 )

HSP 1 Score: 506.9 bits (1304), Expect = 9.8e-144
Identity = 237/264 (89.77%), Postives = 253/264 (95.83%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQS+FAGQ ALK SNEL+R+VG  GGGR TMRRTVKS PQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSSFAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPEIL+K
Sbjct: 61  FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGV+FGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGF+EGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGP 180

Query: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDP+YPGG+FDPL LA+DP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLLDHIADPVANNAWAYATNFVPG 265
           NL DH+ADPVANNAW+YATNFVPG
Sbjct: 241 NLFDHLADPVANNAWSYATNFVPG 264

[Close]

BLAST of Moc04g03340 vs. TAIR 10
Match: AT2G05070.1 (photosystem II light harvesting complex gene 2.2 )

HSP 1 Score: 506.5 bits (1303), Expect = 1.3e-143
Identity = 235/265 (88.68%), Postives = 255/265 (96.23%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQS+FAGQ ALK S++L+++VG +GGGR TMRRTVKS PQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSSFAGQTALKPSSDLIQKVGVLGGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPEIL+K
Sbjct: 61  FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 120

Query: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGV+FGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGF+EGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGP 180

Query: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDP+YPGG+FDPL LA+DP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLLDHIADPVANNAWAYATNFVPGK 266
           NL DH+ADPVANNAW+YATNFVPGK
Sbjct: 241 NLFDHLADPVANNAWSYATNFVPGK 265

[Close]

BLAST of Moc04g03340 vs. TAIR 10
Match: AT3G27690.1 (photosystem II light harvesting complex gene 2.3 )

HSP 1 Score: 505.0 bits (1299), Expect = 3.7e-143
Identity = 237/266 (89.10%), Postives = 253/266 (95.11%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAV-GGGRFTMRRTVKSAPQSIWYGPDRPKYLG 60
           MATSAIQ S+FAGQ  LK SN+L+R++GA  GGGR  MRRTVKS PQSIWYGPDRPKYLG
Sbjct: 1   MATSAIQHSSFAGQTTLKPSNDLLRKIGASNGGGRIIMRRTVKSTPQSIWYGPDRPKYLG 60

Query: 61  PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILA 120
           PFSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPEIL+
Sbjct: 61  PFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILS 120

Query: 121 KNGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGG 180
           KNGV+FGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGF+EGYR+GGG
Sbjct: 121 KNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRIGGG 180

Query: 181 PLGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 240
           PLGEGLDP+YPGG+FDPL LA+DP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI
Sbjct: 181 PLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 240

Query: 241 ENLLDHIADPVANNAWAYATNFVPGK 266
           ENL DHIADPVANNAWAYATNFVPGK
Sbjct: 241 ENLFDHIADPVANNAWAYATNFVPGK 266

[Close]

BLAST of Moc04g03340 vs. TAIR 10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1 )

HSP 1 Score: 422.2 bits (1084), Expect = 3.2e-118
Identity = 209/268 (77.99%), Postives = 230/268 (85.82%), Query Frame = 0


Query: 2   ATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTV---KSAPQSIWYGPDRPKYL 61
           +T A+   AFAG+ A+K S         +G GR TMR+TV   K    S WYG DR KYL
Sbjct: 4   STMALSSPAFAGK-AVKLSPAASE---VLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYL 63

Query: 62  GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEIL 121
           GPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPE+L
Sbjct: 64  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 123

Query: 122 AKNGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRV-G 181
           A+NGV+FGE+VWFKAGSQIFS+GGLDYLGNP+L+HAQSILAIWA QV+LMG VEGYRV G
Sbjct: 124 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 183

Query: 182 GGPLGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 241
            GPLGE  D +YPGGSFDPLGLA DP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 184 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 243

Query: 242 PIENLLDHIADPVANNAWAYATNFVPGK 266
           PIENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 244 PIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Moc04g03340 vs. TAIR 10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2 )

HSP 1 Score: 422.2 bits (1084), Expect = 3.2e-118
Identity = 205/268 (76.49%), Postives = 229/268 (85.45%), Query Frame = 0


Query: 2   ATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTV---KSAPQSIWYGPDRPKYL 61
           +T A+   AFAG+     ++++      +G GR TMR+TV   K    S WYG DR KYL
Sbjct: 4   STMALSSPAFAGKAVKPAASDV------LGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYL 63

Query: 62  GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEIL 121
           GPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPE+L
Sbjct: 64  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 123

Query: 122 AKNGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGG 181
           A+NGV+FGE+VWFKAGSQIFS+GGLDYLGNP+L+HAQSILAIWA QV+LMG VEGYRV G
Sbjct: 124 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 183

Query: 182 -GPLGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 241
            GPLGE  D +YPGGSFDPLGLA DP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 184 DGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 243

Query: 242 PIENLLDHIADPVANNAWAYATNFVPGK 266
           P+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 244 PLENLADHLADPVNNNAWAFATNFVPGK 265

The following BLAST results are available for this feature:

BLAST of Moc04g03340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135994.1	4.8e-153	100.00	chlorophyll a-b binding protein 151, chloroplastic [Momordica charantia]	[more]
XP_038887832.1	1.0e-150	98.11	chlorophyll a-b binding protein 151, chloroplastic [Benincasa hispida]	[more]
XP_008462084.1	1.9e-149	96.98	PREDICTED: chlorophyll a-b binding protein 151, chloroplastic [Cucumis melo] >KA...	[more]
XP_004144543.1	4.2e-149	96.60	chlorophyll a-b binding protein 151, chloroplastic [Cucumis sativus] >KGN43422.1...	[more]
XP_022928240.1	7.2e-149	96.23	chlorophyll a-b binding protein 151, chloroplastic [Cucurbita moschata] >XP_0235...	[more]

BLAST of Moc04g03340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27518	1.4e-147	93.58	Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum OX=3635...	[more]
P12062	3.3e-144	91.70	Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. OX=4104 GN=CAB3...	[more]
P27494	6.2e-143	90.19	Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
Q9SHR7	1.4e-142	89.77	Chlorophyll a-b binding protein 2.1, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
Q9S7J7	1.8e-142	88.68	Chlorophyll a-b binding protein 2.2, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]

BLAST of Moc04g03340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C312	2.3e-153	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A5D3D6Y9	9.2e-150	96.98	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3CG37	9.2e-150	96.98	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0K565	2.1e-149	96.60	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A6J1JQB2	3.5e-149	96.23	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of Moc04g03340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G05100.1	9.8e-144	89.77	photosystem II light harvesting complex gene 2.1	[more]
AT2G05070.1	1.3e-143	88.68	photosystem II light harvesting complex gene 2.2	[more]
AT3G27690.1	3.7e-143	89.10	photosystem II light harvesting complex gene 2.3	[more]
AT1G29930.1	3.2e-118	77.99	chlorophyll A/B binding protein 1	[more]
AT2G34420.1	3.2e-118	76.49	photosystem II light harvesting complex gene B1B2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 66..231 e-value: 9.0E-50 score: 169.3
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 56..258 e-value: 2.8E-90 score: 303.6
None	No IPR available	PANTHER	PTHR21649:SF33	CHLOROPHYLL A-B BINDING PROTEIN 2.1, CHLOROPLASTIC-RELATED	coord: 1..265
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 48..262
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g03340.1	Moc04g03340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding