Moc04g02470 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g02470
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	50S ribosomal protein L6
Location	chr4: 1526897 .. 1529943 (+)
RNA-Seq Expression	Moc04g02470
Synteny	Moc04g02470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCACGCTAACCATCCCATTCCAAACCAGGTAAAAGCCCTAAATTAGTTCACAGTATTGTCTTTCTAGGTTCAAATATCTTAGTATCAACTGTTGGTGGACTTGTAATTTATTATATTTTCTGAGCAAGCTCGGAACTTTGTCTTTGATTGGGTTCCTTTTCTAACCATGGAGACGCTCTGCTATTACATATTCCATTATGGAGTGTGAATTTCTTTAGTAATTGGATTAGAGATTTTGCTATATTGAATAGCCCATAATGGACAGGGAAGCGTTCCTTTTTCCCCATATTTTCATCTTAGTGCACATTTCCATGAATCTGGGGCTTCCAAGATGTGTTTATTTCGTTGTCGTGAACACAGAGCTAAGTTTTTGGGTTTCTTGATATGAGGTAGCTTTTCTGGAGATTATTGGTGGCTACAGTTCAAAGCTATTTGTTTGGAAAGAACTTAACGTACTCTGAGGACTTCTTTCTACGCCATAGTGAACTTTTGAGAGAGCCCCTCTACGTTTCTAGATGATTTATTAATACTAGGAAAATTAAAAAAAAAATTAATTTTTTTAATTACAATATTCAAGCCAATTGGAGGGTTTCTTGAACATCATGGGCTGATTGGGAGGTTATGTCTCCATTTTTGTAATTATGATTCGGATATGTCTGTATTTTTTGTTAAAGCTTCAGGAAGAAATTATTTCAGGTATTTAGCCACCAAGACTTTGTGAACTAACCTTGAACTTCAATAATTCTAGCTTTCTACTTTTCTTAGAAGCCCATAGCAGTAGTACTAATGCAATATATGCGTCTGTGAATTATTTGTTTCATTTTGCATCAAGGGGATCCAGAGATGAATCTGGATTCTTGAATTCAAATATATTTAGTTATATAGGACTATTTATTGCAACCTATTATTTCAATAATGGTAGTTAAGTGAAGAGTTAATCAGCCTTGGAAATGATCTTGGTCAAAATGAAAGGGTGTAAGAATACCTTTATAGTTTTGGCCTCTCCCCTAGAGAACAAGCTTCCAAGTTTAATTGCGGTGGATCTCAATTATCAAGTTAAAGATTCAACTTGGGTCTAATTAACTACTTAAGAAACAAAGGGTGTATTTAACACCAATTCTTAGTGGGGGAGGGAAGAAAAATTAAAAGGGGGAAATGATCTAAACAGTACAGTGAACTAGTTAATCTTACTTTTAAGGTTAATTATGAAAAGAATGGTAATCTTATTTTGTCAGTTGGGGAGGATTGATGGTATTTTCTTGGTCTATATAGAGAGGGTTGGAGTGCTTTATCCTGTTTTTTCAATTTCTTTAATGTAATCTCTAGTCGCAGGGTTATTCTTGTAACATTATCCTCCCATTTCTTGTATATATTGGGCTCCTTGCACTTGGAGAGTTATAAGGAAAGTAGAATGATGGACGTTTCCTGAACATGGGGTGGGCGTGGGTCTATTGGGAGTTCTTTCTCCACTCTTTTAATGCGCCAAATTGTGTTTAATAGAGATGCCCCTAATGTTATGGGCTCAAGTAAGCTTATAGAGTGCATCAAGCTTGGCCTTGGATAATGTATAAGAATAGGTTGAGCTCCCTGCAATAGGAATCTTATGACTAAAAAATAAAGAATAAGAGAACACCATTGTGGGTTTGAATTTGTTCCAAGGACATGGGGGATATGATATTTATACTGTTGAGGACTTGTGTTATGTGTCTGATATGGGGAAAGAAAAAAAAAAAAGATATCAATTTTATTTGTCTATATTTCTTTTGTCTACTCTTGTTTCAATTTCTTTAATGTAGGGAATGGTTTGATACAGAAACTTGAGCAGCCTAGATTTGTTCATTGTAGGTCGTGGTTGTTTGTAATTTGATCTTTCCTTTTCTAAAAGCAAACATTCTAAAATTTGAAACCATTTCCTCATTGTGGCTCAGCAATTTTCGGTCTACATTTTTGGGAGAGAAAAATGGATTCTCTGTTTCTACAATGCCTGTATGTCACATTGGTCTCTTGAGGAAGACTATAGAATGCAAGGAATCACGAATAGGGAAGCAACCTATTCAAGTGCCATCCAATGTAATCATCGCACTGCAGGGCCAGGATTTGAAAGTTAAGGGTCCTTTGGGAGAGCTCTCAATACTTTATCCAAGAGAAGTGAAGATTGAGAGGGAAGATTCTGGGATCTTAAGGGTTAAGAAGGCAGTGGAGACAAGAAGAGCCAAGCAAATGCATGGGCTTTTCAGGTAATCTCATCATGGATTTAATATTCTATGATTTTGTCTCTTCCTCTTAAGTTTTACTTCACATGGGTCATTCCGTTTTTACGTATCTTTGCCAATTTTTTTTGCCTCCTATGTAGCTGCCCTACTTTACTATCAGCTTCAAAAGAGTACTTGCTTCTGTAATCAAGTTGATCACTTTTTAGTCAATAATTATTGAAATACTAGTATGGATGAAAATACTTGTGGAGTGGCCAACTCTAGATATTTGCTCCTTTTTAATGATTATTTGTGGACGGCTGGAAAGAAACCAATTAATCTCTCTTCAAATTCTGAAAAATCCAAGATGACTTCATGTTGTCACTGCAAACAACCAGCTGCTGTGCTCAGTCATTTGAAATAAAGTTGAATGATGGGAAAAGAGTAAAATGTTTTTTCTCTTACCAAATGTAGCCATTCTGAATATGACCATTTCAATTGATCTACTCAGGACGCTTACAGATAATATGGTGGTAGGAGTATCCAGGGGGTTTGAGAAGAAACTTCAGTTGGTCGGTGTTGGTTATCGAGCAATGTTAGAAGGAAAAGACTTGGTATTAAATCTCGGGTTCTCTCATCCAGTTAGAATGGCCATTCCTGACGGTCTTCAAGTAAAGGTGGAAGAAAACACCAGAATCACGGTTAGTGGATATGATAAATGTGCCATTGGTCAGTTTGCCGCTTCTATTAGACAATGGAGACCCCCGGAACCGTATAAGGGTAAAGGAGTGAAATATGCTGATGAAGTTGTCAGAAGAAAGGAGGGGAAAGCAGGGAAGAAGAAGTGA

mRNA sequence

ATGGCTTCCACGCTAACCATCCCATTCCAAACCAGCAATTTTCGGTCTACATTTTTGGGAGAGAAAAATGGATTCTCTGTTTCTACAATGCCTGTATGTCACATTGGTCTCTTGAGGAAGACTATAGAATGCAAGGAATCACGAATAGGGAAGCAACCTATTCAAGTGCCATCCAATGTAATCATCGCACTGCAGGGCCAGGATTTGAAAGTTAAGGGTCCTTTGGGAGAGCTCTCAATACTTTATCCAAGAGAAGTGAAGATTGAGAGGGAAGATTCTGGGATCTTAAGGGTTAAGAAGGCAGTGGAGACAAGAAGAGCCAAGCAAATGCATGGGCTTTTCAGGACGCTTACAGATAATATGGTGGTAGGAGTATCCAGGGGGTTTGAGAAGAAACTTCAGTTGGTCGGTGTTGGTTATCGAGCAATGTTAGAAGGAAAAGACTTGGTATTAAATCTCGGGTTCTCTCATCCAGTTAGAATGGCCATTCCTGACGGTCTTCAAGTAAAGGTGGAAGAAAACACCAGAATCACGGTTAGTGGATATGATAAATGTGCCATTGGTCAGTTTGCCGCTTCTATTAGACAATGGAGACCCCCGGAACCGTATAAGGGTAAAGGAGTGAAATATGCTGATGAAGTTGTCAGAAGAAAGGAGGGGAAAGCAGGGAAGAAGAAGTGA

Coding sequence (CDS)

ATGGCTTCCACGCTAACCATCCCATTCCAAACCAGCAATTTTCGGTCTACATTTTTGGGAGAGAAAAATGGATTCTCTGTTTCTACAATGCCTGTATGTCACATTGGTCTCTTGAGGAAGACTATAGAATGCAAGGAATCACGAATAGGGAAGCAACCTATTCAAGTGCCATCCAATGTAATCATCGCACTGCAGGGCCAGGATTTGAAAGTTAAGGGTCCTTTGGGAGAGCTCTCAATACTTTATCCAAGAGAAGTGAAGATTGAGAGGGAAGATTCTGGGATCTTAAGGGTTAAGAAGGCAGTGGAGACAAGAAGAGCCAAGCAAATGCATGGGCTTTTCAGGACGCTTACAGATAATATGGTGGTAGGAGTATCCAGGGGGTTTGAGAAGAAACTTCAGTTGGTCGGTGTTGGTTATCGAGCAATGTTAGAAGGAAAAGACTTGGTATTAAATCTCGGGTTCTCTCATCCAGTTAGAATGGCCATTCCTGACGGTCTTCAAGTAAAGGTGGAAGAAAACACCAGAATCACGGTTAGTGGATATGATAAATGTGCCATTGGTCAGTTTGCCGCTTCTATTAGACAATGGAGACCCCCGGAACCGTATAAGGGTAAAGGAGTGAAATATGCTGATGAAGTTGTCAGAAGAAAGGAGGGGAAAGCAGGGAAGAAGAAGTGA

Protein sequence

MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK

Homology

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BLAST of Moc04g02470 vs. NCBI nr
Match: XP_022136314.1 (50S ribosomal protein L6, chloroplastic [Momordica charantia])

HSP 1 Score: 448.4 bits (1152), Expect = 3.8e-122
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNV 60
           MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNV
Sbjct: 1   MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNV 60

Query: 61  IIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDN 120
           IIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDN
Sbjct: 61  IIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDN 120

Query: 121 MVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVS 180
           MVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVS
Sbjct: 121 MVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVS 180

Query: 181 GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK 227
           GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK
Sbjct: 181 GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK 226

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BLAST of Moc04g02470 vs. NCBI nr
Match: XP_022930652.1 (50S ribosomal protein L6, chloroplastic isoform X2 [Cucurbita moschata] >KAG7022869.1 50S ribosomal protein L6, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 426.0 bits (1094), Expect = 2.0e-115
Identity = 214/226 (94.69%), Postives = 219/226 (96.90%), Query Frame = 0


Query: 1   MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNV 60
           MASTL+IPFQTSNFRSTFLGEKNGFS STMPV HI  LRKTIECKESRIGKQPIQVPSNV
Sbjct: 1   MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNV 60

Query: 61  IIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDN 120
            I LQGQDLKVKGPLGELS+LYPREVKIER+DSGILRVKKA+ETRRA QMHGLFRTLTDN
Sbjct: 61  TITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALETRRANQMHGLFRTLTDN 120

Query: 121 MVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVS 180
           MVVGVS+GFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVS
Sbjct: 121 MVVGVSKGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVS 180

Query: 181 GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK 227
           GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK
Sbjct: 181 GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK 226

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BLAST of Moc04g02470 vs. NCBI nr
Match: XP_023530191.1 (50S ribosomal protein L6, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 422.2 bits (1084), Expect = 2.9e-114
Identity = 211/226 (93.36%), Postives = 219/226 (96.90%), Query Frame = 0


Query: 1   MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNV 60
           MASTL+IPFQTSNFRSTFLGEKNGFS ST+PV HI  LR+TIECKESRIGKQPIQVPSNV
Sbjct: 1   MASTLSIPFQTSNFRSTFLGEKNGFSASTVPVSHIVRLRRTIECKESRIGKQPIQVPSNV 60

Query: 61  IIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDN 120
            I LQGQDLKVKGPLGELS+LYPREVKIER+D+GILRVKKA+ETRRA QMHGLFRTLTDN
Sbjct: 61  TITLQGQDLKVKGPLGELSLLYPREVKIERDDAGILRVKKALETRRANQMHGLFRTLTDN 120

Query: 121 MVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVS 180
           MVVGVS+GFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVS
Sbjct: 121 MVVGVSKGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVS 180

Query: 181 GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK 227
           GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK
Sbjct: 181 GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK 226

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BLAST of Moc04g02470 vs. NCBI nr
Match: XP_022988916.1 (50S ribosomal protein L6, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 421.8 bits (1083), Expect = 3.8e-114
Identity = 211/226 (93.36%), Postives = 218/226 (96.46%), Query Frame = 0


Query: 1   MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNV 60
           MASTL+IPFQTSNFRSTFLGEKNGFS STMPV HI  LRKTIECKESRIGKQPIQVPSNV
Sbjct: 1   MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNV 60

Query: 61  IIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDN 120
            I LQGQDLKVKGPLGELS+LYPREVKIER+DSGILRVKKA+ETRRA QMHGLFRTLTDN
Sbjct: 61  TITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALETRRANQMHGLFRTLTDN 120

Query: 121 MVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVS 180
           MV+GVS+GFEKKLQLVGVGYRA+LEGKDLVLNLGFSHPVRMAIPDGLQV VEENTRITVS
Sbjct: 121 MVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVS 180

Query: 181 GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK 227
           GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK
Sbjct: 181 GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK 226

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BLAST of Moc04g02470 vs. NCBI nr
Match: XP_008455431.1 (PREDICTED: 50S ribosomal protein L6, chloroplastic [Cucumis melo])

HSP 1 Score: 411.4 bits (1056), Expect = 5.1e-111
Identity = 201/215 (93.49%), Postives = 210/215 (97.67%), Query Frame = 0


Query: 12  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKV 71
           +NFRSTFLGEKNGF VS MPVCHIGLLRKTIECKESRIGKQPIQVPSNV I LQGQDLKV
Sbjct: 19  NNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKV 78

Query: 72  KGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDNMVVGVSRGFEK 131
           KGPLGELSILYPREVKIEREDSGI+RVKKA+ETRRA QMHGLFRTLTDNMVVGVS+GFEK
Sbjct: 79  KGPLGELSILYPREVKIEREDSGIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEK 138

Query: 132 KLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFA 191
           KLQL+GVGYRAM+EGKDLVLNLGFSHPVRMAIPDG+Q+KVEENTRITVSGYDKCAIGQFA
Sbjct: 139 KLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFA 198

Query: 192 ASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK 227
           ASIRQWRPPEPYKGKGVKYADE+VRRKEGKAGKKK
Sbjct: 199 ASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK 233

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BLAST of Moc04g02470 vs. ExPASy Swiss-Prot
Match: O23049 (50S ribosomal protein L6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL6 PE=2 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 7.0e-95
Identity = 173/226 (76.55%), Postives = 196/226 (86.73%), Query Frame = 0


Query: 1   MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNV 60
           MAS+L   FQ    RS FLG++N F VS+ P   +G   KTIECKESRIGKQPI VPSNV
Sbjct: 1   MASSLVSSFQP---RSAFLGDRNVFKVSSTPFAQVGYSSKTIECKESRIGKQPIAVPSNV 60

Query: 61  IIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDN 120
            IAL+GQDLKVKGPLGEL++ YPREV++ +E+SG LRVKK VETRRA QMHGLFRTLTDN
Sbjct: 61  TIALEGQDLKVKGPLGELALTYPREVELTKEESGFLRVKKTVETRRANQMHGLFRTLTDN 120

Query: 121 MVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVS 180
           MVVGVS+GFEKKL LVGVGYRA ++GK+LVLNLGFSHPV+M IPD L+VKVEENTRITVS
Sbjct: 121 MVVGVSKGFEKKLILVGVGYRATVDGKELVLNLGFSHPVKMQIPDSLKVKVEENTRITVS 180

Query: 181 GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK 227
           GYDK  IGQFAA++R+WRPPEPYKGKGVKY+DE+VRRKEGKAGKKK
Sbjct: 181 GYDKSEIGQFAATVRKWRPPEPYKGKGVKYSDEIVRRKEGKAGKKK 223

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BLAST of Moc04g02470 vs. ExPASy Swiss-Prot
Match: P82193 (50S ribosomal protein L6, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL6 PE=1 SV=2)

HSP 1 Score: 338.2 bits (866), Expect = 7.2e-92
Identity = 167/215 (77.67%), Postives = 190/215 (88.37%), Query Frame = 0


Query: 12  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKV 71
           S+ +S FLG K   S S +PV  IG  RK+++CKESRIGKQPI VP+NV IA++GQDLKV
Sbjct: 7   SHMKSVFLGMKVEISTS-VPVTRIGFWRKSVDCKESRIGKQPITVPANVAIAMEGQDLKV 66

Query: 72  KGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDNMVVGVSRGFEK 131
           KGPLGELSI YPREV +E+++SG LRV+KAVETRRA QMHGLFRTLTDNMVVGVS+GFEK
Sbjct: 67  KGPLGELSITYPREVLVEKQESGFLRVRKAVETRRANQMHGLFRTLTDNMVVGVSKGFEK 126

Query: 132 KLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFA 191
           KLQLVGVGYRA +EGKDL+L+LGFSHPVRMAIPD LQVKVEENT++TVSG DK  +GQFA
Sbjct: 127 KLQLVGVGYRATVEGKDLILSLGFSHPVRMAIPDELQVKVEENTKVTVSGRDKSVVGQFA 186

Query: 192 ASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK 227
           A+IR WRPPEPYKGKGV+Y DEVVRRKEGKAGKKK
Sbjct: 187 ATIRSWRPPEPYKGKGVRYVDEVVRRKEGKAGKKK 220

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BLAST of Moc04g02470 vs. ExPASy Swiss-Prot
Match: B0C1E7 (50S ribosomal protein L6 OS=Acaryochloris marina (strain MBIC 11017) OX=329726 GN=rplF PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 4.0e-50
Identity = 103/179 (57.54%), Postives = 133/179 (74.30%), Query Frame = 0


Query: 47  SRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRR 106
           SRIGK PI +P  V + ++GQ + VKGP GELS     EV IE+ D+ ++ V +  E+R 
Sbjct: 2   SRIGKVPIPIPDKVNVTIKGQAVTVKGPKGELSREITPEVAIEQADN-LVTVTRRNESRI 61

Query: 107 AKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDG 166
           A+Q HGL RTL  NMV GVS+GFEKKLQ+ GVGYRA ++G++L+LN+G+S+PV +  P+G
Sbjct: 62  ARQRHGLSRTLIANMVEGVSKGFEKKLQIQGVGYRAQVQGRNLILNVGYSNPVTIEPPEG 121

Query: 167 LQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKK 226
           +QV VE NT + VSG +K  +G  AA IR  RPPEPYKGKG++YADE VRRK GKAGKK
Sbjct: 122 VQVAVESNTNVIVSGINKEVVGNTAARIRAVRPPEPYKGKGIRYADEYVRRKVGKAGKK 179

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BLAST of Moc04g02470 vs. ExPASy Swiss-Prot
Match: B2ITP1 (50S ribosomal protein L6 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=rplF PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 6.8e-50
Identity = 100/178 (56.18%), Postives = 130/178 (73.03%), Query Frame = 0


Query: 47  SRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRR 106
           SRIGK+PI +P+ V +A+ G ++ VKGP GELS      V + +E   IL V +  ETR 
Sbjct: 2   SRIGKRPITIPAKVQVAINGTNIVVKGPKGELSRTLRDNVSLSQEGE-ILHVNRRDETRT 61

Query: 107 AKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDG 166
           +KQ+HGL RTL  NMV GVS+GF+++L++ GVGYRA L+G++LVLN+G+SH V++  PDG
Sbjct: 62  SKQLHGLSRTLVANMVEGVSQGFQRRLEIQGVGYRAQLQGRNLVLNMGYSHQVQIEPPDG 121

Query: 167 LQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGK 225
           +Q  VE  T + VSGYDK  +G  AA IR  RPPEPYKGKG++YA EVVRRK GK GK
Sbjct: 122 IQFAVEGTTNVIVSGYDKEIVGNTAAKIRAVRPPEPYKGKGIRYAGEVVRRKAGKTGK 178

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BLAST of Moc04g02470 vs. ExPASy Swiss-Prot
Match: B7KI01 (50S ribosomal protein L6 OS=Gloeothece citriformis (strain PCC 7424) OX=65393 GN=rplF PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.2e-49
Identity = 99/179 (55.31%), Postives = 127/179 (70.95%), Query Frame = 0


Query: 47  SRIGKQPIQVPSNVIIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRR 106
           SRIGK+PI +P+ V + + G  + VKGP GEL    P  V +E +D G+LRV +  ++R 
Sbjct: 2   SRIGKRPITIPNKVTVNIDGSHVAVKGPKGELQRTLPTLVIVE-QDEGVLRVVRQDDSRT 61

Query: 107 AKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDG 166
           A+Q HGL RTL  NMV GVS+GFEK+L++ GVGYRA  +G  L LN+G+S PV M +P G
Sbjct: 62  ARQRHGLCRTLVSNMVEGVSKGFEKRLEIQGVGYRAAAQGSKLTLNVGYSKPVEMDMPSG 121

Query: 167 LQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKK 226
           + V VE+NT IT++G DK  +G  AA IR  RPPEPYKGKG++Y  EVVRRK GK GKK
Sbjct: 122 IGVAVEKNTEITITGIDKEIVGNVAAKIRAVRPPEPYKGKGIRYKGEVVRRKAGKTGKK 179

[Close]

BLAST of Moc04g02470 vs. ExPASy TrEMBL
Match: A0A6J1C3Z5 (50S ribosomal protein L6, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008030 PE=3 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 1.8e-122
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNV 60
           MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNV
Sbjct: 1   MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNV 60

Query: 61  IIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDN 120
           IIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDN
Sbjct: 61  IIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDN 120

Query: 121 MVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVS 180
           MVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVS
Sbjct: 121 MVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVS 180

Query: 181 GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK 227
           GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK
Sbjct: 181 GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK 226

[Close]

BLAST of Moc04g02470 vs. ExPASy TrEMBL
Match: A0A6J1ER61 (50S ribosomal protein L6, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437054 PE=3 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 9.7e-116
Identity = 214/226 (94.69%), Postives = 219/226 (96.90%), Query Frame = 0


Query: 1   MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNV 60
           MASTL+IPFQTSNFRSTFLGEKNGFS STMPV HI  LRKTIECKESRIGKQPIQVPSNV
Sbjct: 1   MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNV 60

Query: 61  IIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDN 120
            I LQGQDLKVKGPLGELS+LYPREVKIER+DSGILRVKKA+ETRRA QMHGLFRTLTDN
Sbjct: 61  TITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALETRRANQMHGLFRTLTDN 120

Query: 121 MVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVS 180
           MVVGVS+GFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVS
Sbjct: 121 MVVGVSKGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVS 180

Query: 181 GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK 227
           GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK
Sbjct: 181 GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK 226

[Close]

BLAST of Moc04g02470 vs. ExPASy TrEMBL
Match: A0A6J1JIK5 (50S ribosomal protein L6, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486127 PE=3 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.8e-114
Identity = 211/226 (93.36%), Postives = 218/226 (96.46%), Query Frame = 0


Query: 1   MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNV 60
           MASTL+IPFQTSNFRSTFLGEKNGFS STMPV HI  LRKTIECKESRIGKQPIQVPSNV
Sbjct: 1   MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNV 60

Query: 61  IIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDN 120
            I LQGQDLKVKGPLGELS+LYPREVKIER+DSGILRVKKA+ETRRA QMHGLFRTLTDN
Sbjct: 61  TITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALETRRANQMHGLFRTLTDN 120

Query: 121 MVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVS 180
           MV+GVS+GFEKKLQLVGVGYRA+LEGKDLVLNLGFSHPVRMAIPDGLQV VEENTRITVS
Sbjct: 121 MVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVS 180

Query: 181 GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK 227
           GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK
Sbjct: 181 GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK 226

[Close]

BLAST of Moc04g02470 vs. ExPASy TrEMBL
Match: A0A1S3C0W5 (50S ribosomal protein L6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495590 PE=3 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 2.5e-111
Identity = 201/215 (93.49%), Postives = 210/215 (97.67%), Query Frame = 0


Query: 12  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKV 71
           +NFRSTFLGEKNGF VS MPVCHIGLLRKTIECKESRIGKQPIQVPSNV I LQGQDLKV
Sbjct: 19  NNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKV 78

Query: 72  KGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDNMVVGVSRGFEK 131
           KGPLGELSILYPREVKIEREDSGI+RVKKA+ETRRA QMHGLFRTLTDNMVVGVS+GFEK
Sbjct: 79  KGPLGELSILYPREVKIEREDSGIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEK 138

Query: 132 KLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFA 191
           KLQL+GVGYRAM+EGKDLVLNLGFSHPVRMAIPDG+Q+KVEENTRITVSGYDKCAIGQFA
Sbjct: 139 KLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFA 198

Query: 192 ASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK 227
           ASIRQWRPPEPYKGKGVKYADE+VRRKEGKAGKKK
Sbjct: 199 ASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK 233

[Close]

BLAST of Moc04g02470 vs. ExPASy TrEMBL
Match: A0A6J1GLT4 (50S ribosomal protein L6, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111455470 PE=3 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.1e-110
Identity = 202/215 (93.95%), Postives = 210/215 (97.67%), Query Frame = 0


Query: 12  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVIIALQGQDLKV 71
           +NFRSTFLGEKNGF++STMPV H G+LRKTIECKESRIGKQPIQVPSNV I LQGQDLKV
Sbjct: 17  NNFRSTFLGEKNGFTISTMPVSHTGILRKTIECKESRIGKQPIQVPSNVNITLQGQDLKV 76

Query: 72  KGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDNMVVGVSRGFEK 131
           KGPLGELSILYPREVKIEREDSGILRVKKA+ETRRA QMHGLFRTLTDNMVVGVS+GFEK
Sbjct: 77  KGPLGELSILYPREVKIEREDSGILRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEK 136

Query: 132 KLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFA 191
           KLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIP+GLQVKVEENTRITVSGYDKCAIGQFA
Sbjct: 137 KLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFA 196

Query: 192 ASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK 227
           ASIRQWRPPEPYKGKGVKYADE+VRRKEGKAGKKK
Sbjct: 197 ASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK 231

[Close]

BLAST of Moc04g02470 vs. TAIR 10
Match: AT1G05190.1 (Ribosomal protein L6 family )

HSP 1 Score: 348.2 bits (892), Expect = 4.9e-96
Identity = 173/226 (76.55%), Postives = 196/226 (86.73%), Query Frame = 0


Query: 1   MASTLTIPFQTSNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNV 60
           MAS+L   FQ    RS FLG++N F VS+ P   +G   KTIECKESRIGKQPI VPSNV
Sbjct: 1   MASSLVSSFQP---RSAFLGDRNVFKVSSTPFAQVGYSSKTIECKESRIGKQPIAVPSNV 60

Query: 61  IIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDN 120
            IAL+GQDLKVKGPLGEL++ YPREV++ +E+SG LRVKK VETRRA QMHGLFRTLTDN
Sbjct: 61  TIALEGQDLKVKGPLGELALTYPREVELTKEESGFLRVKKTVETRRANQMHGLFRTLTDN 120

Query: 121 MVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVS 180
           MVVGVS+GFEKKL LVGVGYRA ++GK+LVLNLGFSHPV+M IPD L+VKVEENTRITVS
Sbjct: 121 MVVGVSKGFEKKLILVGVGYRATVDGKELVLNLGFSHPVKMQIPDSLKVKVEENTRITVS 180

Query: 181 GYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK 227
           GYDK  IGQFAA++R+WRPPEPYKGKGVKY+DE+VRRKEGKAGKKK
Sbjct: 181 GYDKSEIGQFAATVRKWRPPEPYKGKGVKYSDEIVRRKEGKAGKKK 223

[Close]

BLAST of Moc04g02470 vs. TAIR 10
Match: AT2G18400.1 (ribosomal protein L6 family protein )

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-20
Identity = 47/98 (47.96%), Postives = 68/98 (69.39%), Query Frame = 0


Query: 129 FEKKLQLVGVGYRAMLE--GKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCA 188
           F + L++VGVGY+A  E  G+ L L LG+SH V +A+P  ++V   +N  +  +G DK  
Sbjct: 5   FFRFLKIVGVGYKARAEEAGRFLYLKLGYSHEVELAVPPAVRVFCFKNNVVCCTGIDKQR 64

Query: 189 IGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGK 225
           + QFAA++R  +PPEPYKGKG+ Y DEVV++K+GK  K
Sbjct: 65  VHQFAATVRSCKPPEPYKGKGIMYTDEVVKKKQGKKSK 102

The following BLAST results are available for this feature:

BLAST of Moc04g02470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136314.1	3.8e-122	100.00	50S ribosomal protein L6, chloroplastic [Momordica charantia]	[more]
XP_022930652.1	2.0e-115	94.69	50S ribosomal protein L6, chloroplastic isoform X2 [Cucurbita moschata] >KAG7022...	[more]
XP_023530191.1	2.9e-114	93.36	50S ribosomal protein L6, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022988916.1	3.8e-114	93.36	50S ribosomal protein L6, chloroplastic isoform X2 [Cucurbita maxima]	[more]
XP_008455431.1	5.1e-111	93.49	PREDICTED: 50S ribosomal protein L6, chloroplastic [Cucumis melo]	[more]

BLAST of Moc04g02470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23049	7.0e-95	76.55	50S ribosomal protein L6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL6 ...	[more]
P82193	7.2e-92	77.67	50S ribosomal protein L6, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL6 PE=...	[more]
B0C1E7	4.0e-50	57.54	50S ribosomal protein L6 OS=Acaryochloris marina (strain MBIC 11017) OX=329726 G...	[more]
B2ITP1	6.8e-50	56.18	50S ribosomal protein L6 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) O...	[more]
B7KI01	1.2e-49	55.31	50S ribosomal protein L6 OS=Gloeothece citriformis (strain PCC 7424) OX=65393 GN...	[more]

BLAST of Moc04g02470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C3Z5	1.8e-122	100.00	50S ribosomal protein L6, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1ER61	9.7e-116	94.69	50S ribosomal protein L6, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1JIK5	1.8e-114	93.36	50S ribosomal protein L6, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 G...	[more]
A0A1S3C0W5	2.5e-111	93.49	50S ribosomal protein L6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495590 ...	[more]
A0A6J1GLT4	2.1e-110	93.95	50S ribosomal protein L6, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Moc04g02470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05190.1	4.9e-96	76.55	Ribosomal protein L6 family	[more]
AT2G18400.1	1.5e-20	47.96	ribosomal protein L6 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019906	Ribosomal protein L6, bacterial-type	PRINTS	PR00059	RIBOSOMALL6	coord: 117..142 score: 61.04 coord: 145..161 score: 49.15 coord: 187..208 score: 66.42
IPR019906	Ribosomal protein L6, bacterial-type	TIGRFAM	TIGR03654	TIGR03654	coord: 47..222 e-value: 3.1E-70 score: 233.4
IPR019906	Ribosomal protein L6, bacterial-type	HAMAP	MF_01365_B	Ribosomal_L6_B	coord: 46..222 score: 36.799294
IPR036789	Ribosomal protein L6, alpha-beta domain superfamily	GENE3D	3.90.930.12		coord: 129..226 e-value: 4.3E-41 score: 141.0
IPR036789	Ribosomal protein L6, alpha-beta domain superfamily	GENE3D	3.90.930.12		coord: 45..128 e-value: 2.0E-24 score: 87.8
IPR036789	Ribosomal protein L6, alpha-beta domain superfamily	SUPERFAMILY	56053	Ribosomal protein L6	coord: 47..128
IPR036789	Ribosomal protein L6, alpha-beta domain superfamily	SUPERFAMILY	56053	Ribosomal protein L6	coord: 129..222
IPR020040	Ribosomal protein L6, alpha-beta domain	PFAM	PF00347	Ribosomal_L6	coord: 56..128 e-value: 2.4E-13 score: 50.6 coord: 136..210 e-value: 3.0E-19 score: 69.5
IPR000702	Ribosomal protein L6	PANTHER	PTHR11655	60S/50S RIBOSOMAL PROTEIN L6/L9	coord: 1..226
None	No IPR available	PANTHER	PTHR11655:SF38	BNAA10G03220D PROTEIN	coord: 1..226
IPR002358	Ribosomal protein L6, conserved site	PROSITE	PS00525	RIBOSOMAL_L6_1	coord: 200..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g02470.1	Moc04g02470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome