Moc04g00010 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g00010
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Plus3 domain-containing protein
Location	chr4: 4984 .. 7337 (+)
RNA-Seq Expression	Moc04g00010
Synteny	Moc04g00010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGGATATCAGCGAGAAGATTTCTCGACACGACGTTACCTCCATTATAAACGAGTATGTCAATATTAATAATCTTCTTCATCCCTCTAGAAAGAAAAGAATCATCTGCGATGATAGGCTCCTTTCCATTTTCGGAAGGAAAACAATTGGCCGTATTAAAATCCATGACATGCTAGAACCACACTTTGCCGAGAATCAAGATGAATCAGATGATGACTTTTCATGCAGCTCGGACGAGACTGAGAATCTTTCAAATACCTTCAAACGGGATAATGGCATAACCCCTGGAAGAAAGCTCAATCAGAAGACGAGAGTGCTGGTGAACCCAAATAGCTATTTTGCTGCCATAGTTCCTGGCAATATTAATCTTGTCTACTTGAGAAAGAGTTTAGTAGAGGATCTGCTTAAAGATCCTGGAACCTTTGAAAGCAAGTTGATTGGTAGCTTTGTCAGGATTAAATCTGACCCCCACGACTATCTTCAGAAAAATACTCATCAGCTCGTGCAGGTTATAGGTAACTACACTAACTTTTTTATTCATGAACATGGGAAATGTGTTCTGGAATAATTTCTATGTACAGATATAAACTTCGATATAAAGGGAAATGTGTTAATTTTATGTACAGTCCTCTCATGGAGATATATGCAAATTGGTCGCTATGAAGGCAATTGTATAGGAAAGATTGTTGCTAGAATTAATTAGGTAATTGATCAATACATACCACTTTGGATGTGCTCTGTGCATTTACTTTTTTCTAGTTGTTCTTAAAATGAGGAAAAAAGTCTTGCTACTTTACATCTAATTGTGGAGATCTCTCGGAAATACTTAGTGGGGATTTCGTCTTTGTCATTACCCAGAGTCAATTTTTCAAGCTTAAATCTTGCTAGGAATAGTACTTTACAGCCATGTATTCTCAATTAATGAAACGACAATGAGTCACTTGAAGCTATCTTTGAAGGTGTATTTCTTAAGTTTTTTTTTTCTAGTACAACATGTGGGGTGGGGATCGAACTCACAACCTCTTGATTGGAGATACTAATTACCGCTGAGCTATTCTCGCTTTGGCTGTATTGCTTAAGTTTCTTCAAGGTTCCTCTTCCATGCCTTCTATTTCGTCTATTTCTACAGTGATTTCATGACTTCAAGCTTTCGTGCAGTGTCTAATTTTCATATCCTTTTAGTTAAAGAATTATTCAAAAGATACCAATATCCACAAGTAATTCCCATTTGTTTTGCCTGTAACCATAAATAAGTAATTTATTTCCAATAAAGCAAGGTTCACAAGATTTTTTCACTTTCCTCTGAACATGCATTAGCTCTTTATGACATCTCCAGAGAATGCCTACGAGCACGCTCATTCCTTTGGGGCCTATATAGTTTGCCACATGATTTTTCAAGGCATTGGTAAAAATGTATTCTTTCTCATTTATCCTTGAAAGTGTCTATTTCTGCTTCACAGTCCACTCAAGGTTTTACAAGTTGTTATTATGCTTACCGGCCAACCATGTCATCTCAGATAACTAATTCAATGATCATATTTTTTTGATATCCTTTAGGGGTGAAGAAAATTTCTATATCTGGTGATTTGAGTACAAAATTCATTCTTCATGCTTCCAATGTGATGAAAGATATCAGTATTTGCATGCTTTCAGATGAAAAGTTCTCTGAGGTAACTCCTTTCCCCCCTTTCCCCCAAGTTACATCATTCTTAGGTAATAAATAAACACAAAAGTTGATGCTGAAAAATCTCCTTTATTGTTATTATCATTACTGATCAATTTCCTTGAATGTAAACTAGAGTACGTATAATTATGGAGTGTGAACAAAGTGATAAGGTATCCTTCTCCGTAGAATAAGACCGCAGAAAATTGTTTTGCAGTCTAAAAATGATAGAAAAACTAACTACCAAAATTCACACAATTCTAATCCATAACCATTAAAATAACTCCAAATTATTCCATACCAAAATGGTATCCATATTTTCGTATTCACCTTAATGGAAAAGTCTTCGCCCACTCTCTAATTGTGTGCTATGAAAACCATTTAGAAATTATCTGCCTCTTCTTCAATTGTCTTTCCCAGATTTATCCTGATATAATACTATAGGAATTTCTTAAGTACAGGAGTTCGTTTTAATCTCACGTCTCTGGAGGGCTTGGTAAAAAATGCTCTCTTCTCTCTCCTTTTCTTTCCTCTTTGTTTTCTAGTGGTGGTTCCGGTAAGTTGTGTTCGTGATATTCTGCCTACAGATTCAAGATTAGTTTTATTTTGTTTCACTAATGGAGATTAATAGCTGTAGTATCGATGGTTCTTTTTTCTGAATTTGGGCAGAAAATGAGAGCTTTATGGTAG

mRNA sequence

AAGGATATCAGCGAGAAGATTTCTCGACACGACGTTACCTCCATTATAAACGACTCGGACGAGACTGAGAATCTTTCAAATACCTTCAAACGGGATAATGGCATAACCCCTGGAAGAAAGCTCAATCAGAAGACGAGAGTGCTGGTGAACCCAAATAGCTATTTTGCTGCCATAGTTCCTGGCAATATTAATCTTGTCTACTTGAGAAAGAGTTTAGTAGAGGATCTGCTTAAAGATCCTGGAACCTTTGAAAGCAAGTTGATTGGTAGCTTTGTCAGGATTAAATCTGACCCCCACGACTATCTTCAGAAAAATACTCATCAGCTCGTGCAGGTTATAGGGGTGAAGAAAATTTCTATATCTGGTGATTTGAGTACAAAATTCATTCTTCATGCTTCCAATGTGATGAAAGATATCAGTATTTGCATGCTTTCAGATGAAAAGTTCTCTGAGAAAATGAGAGCTTTATGGTAG

Coding sequence (CDS)

GAAAGGATATCAGCGAGAAGATTTCTCGACACGACGTTACCTCCATTATAAACGACTCGGACGAGACTGAGAATCTTTCAAATACCTTCAAACGGGATAATGGCATAACCCCTGGAAGAAAGCTCAATCAGAAGACGAGAGTGCTGGTGAACCCAAATAGCTATTTTGCTGCCATAGTTCCTGGCAATATTAATCTTGTCTACTTGAGAAAGAGTTTAGTAGAGGATCTGCTTAAAGATCCTGGAACCTTTGAAAGCAAGTTGATTGGTAGCTTTGTCAGGATTAAATCTGACCCCCACGACTATCTTCAGAAAAATACTCATCAGCTCGTGCAGGTTATAGGGGTGAAGAAAATTTCTATATCTGGTGATTTGAGTACAAAATTCATTCTTCATGCTTCCAATGTGATGAAAGATATCAGTATTTGCATGCTTTCAGATGAAAAGTTCTCTGAGAAAATGAGAGCTTTATGGTAG

Protein sequence

KDISEKISRHDVTSIINDSDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVPGNINLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISGDLSTKFILHASNVMKDISICMLSDEKFSEKMRALW

Homology

[Close]

BLAST of Moc04g00010 vs. NCBI nr
Match: XP_022148064.1 (uncharacterized protein At5g08430 isoform X3 [Momordica charantia])

HSP 1 Score: 296.6 bits (758), Expect = 1.3e-76
Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   KDISEKISRHDVTSIINDSDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVP 60
           KDISEKISRHDVTSIINDSDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVP
Sbjct: 48  KDISEKISRHDVTSIINDSDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVP 107

Query: 61  GNINLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISI 120
           GNINLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISI
Sbjct: 108 GNINLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISI 167

Query: 121 SGDLSTKFILHASNVMKDISICMLSDEKFSEK 153
           SGDLSTKFILHASNVMKDISICMLSDEKFSE+
Sbjct: 168 SGDLSTKFILHASNVMKDISICMLSDEKFSEE 199

[Close]

BLAST of Moc04g00010 vs. NCBI nr
Match: XP_022148062.1 (uncharacterized protein At5g08430 isoform X1 [Momordica charantia])

HSP 1 Score: 268.5 bits (685), Expect = 3.7e-68
Identity = 150/210 (71.43%), Postives = 152/210 (72.38%), Query Frame = 0


Query: 1   KDISEKISRHDVTSIIND------------------------------------------ 60
           KDISEKISRHDVTSIIN+                                          
Sbjct: 48  KDISEKISRHDVTSIINEYVNINNLLHPSRKKRIICDDRLLSIFGRKTIGRIKIHDMLEP 107

Query: 61  ----------------SDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVPGN 120
                           SDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVPGN
Sbjct: 108 HFAENQDESDDDFSCSSDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVPGN 167

Query: 121 INLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISG 153
           INLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISG
Sbjct: 168 INLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISG 227

[Close]

BLAST of Moc04g00010 vs. NCBI nr
Match: XP_022148063.1 (uncharacterized protein At5g08430 isoform X2 [Momordica charantia])

HSP 1 Score: 268.5 bits (685), Expect = 3.7e-68
Identity = 150/210 (71.43%), Postives = 152/210 (72.38%), Query Frame = 0


Query: 1   KDISEKISRHDVTSIIND------------------------------------------ 60
           KDISEKISRHDVTSIIN+                                          
Sbjct: 48  KDISEKISRHDVTSIINEYVNINNLLHPSRKKRIICDDRLLSIFGRKTIGRIKIHDMLEP 107

Query: 61  ----------------SDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVPGN 120
                           SDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVPGN
Sbjct: 108 HFAENQDESDDDFSCSSDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVPGN 167

Query: 121 INLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISG 153
           INLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISG
Sbjct: 168 INLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISG 227

[Close]

BLAST of Moc04g00010 vs. NCBI nr
Match: XP_022148065.1 (uncharacterized protein At5g08430 isoform X4 [Momordica charantia])

HSP 1 Score: 264.2 bits (674), Expect = 7.0e-67
Identity = 133/134 (99.25%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 19  SDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVPGNINLVYLRKSLVEDLLK 78
           SDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVPGNINLVYLRKSLVEDLLK
Sbjct: 21  SDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVPGNINLVYLRKSLVEDLLK 80

Query: 79  DPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISGDLSTKFILHASNVMKD 138
           DPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISGDLSTKFILHASNVMKD
Sbjct: 81  DPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISGDLSTKFILHASNVMKD 140

Query: 139 ISICMLSDEKFSEK 153
           ISICMLSDEKFSE+
Sbjct: 141 ISICMLSDEKFSEE 154

[Close]

BLAST of Moc04g00010 vs. NCBI nr
Match: KAG6572491.1 (Zinc finger CCCH domain-containing protein 37, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 230.3 bits (586), Expect = 1.1e-56
Identity = 114/134 (85.07%), Postives = 124/134 (92.54%), Query Frame = 0


Query: 19  SDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVPGNINLVYLRKSLVEDLLK 78
           SDETENL NT KR+NG TPGRKL+QKTRVLVNPN+ FAA+VPGNINLVYLRKSLVEDL+K
Sbjct: 569 SDETENLLNTLKRENGKTPGRKLSQKTRVLVNPNTSFAAMVPGNINLVYLRKSLVEDLVK 628

Query: 79  DPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISGDLSTKFILHASNVMKD 138
           D  TFESKLIGSFVRIKSDPHDYLQKNTHQLVQV GVKK+SI GDL T+F+LH SNVMKD
Sbjct: 629 DHETFESKLIGSFVRIKSDPHDYLQKNTHQLVQVTGVKKVSIPGDLGTRFLLHVSNVMKD 688

Query: 139 ISICMLSDEKFSEK 153
           +SICMLSDEKFSE+
Sbjct: 689 VSICMLSDEKFSEE 702

[Close]

BLAST of Moc04g00010 vs. ExPASy Swiss-Prot
Match: Q9FT92 (Uncharacterized protein At5g08430 OS=Arabidopsis thaliana OX=3702 GN=At5g08430 PE=1 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 7.4e-27
Identity = 65/119 (54.62%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 35  ITPGRKLNQKT-RVLVNPNSYFAAIVPGNINLVYLRKSLVEDLLKDPGTFESKLIGSFVR 94
           I    K+ ++T +V+  P   FAAIV  NI L+YLRKSLV++LLK P TFE K++GSFVR
Sbjct: 127 ICHSEKIAKRTSKVVKKPRGTFAAIVSDNIKLLYLRKSLVQELLKSPDTFEGKMLGSFVR 186

Query: 95  IKSDPHDYLQKNTHQLVQVIGVKKISISGDLSTKFILHASNVMKDISICMLSDEKFSEK 153
           IKSDP+DYLQK  +QLVQV GVKK   + D    F+L  +N +KD+SI +LSD+ FS++
Sbjct: 187 IKSDPNDYLQKYPYQLVQVTGVKKEHGTDD----FLLQVTNYVKDVSISVLSDDNFSQE 241

[Close]

BLAST of Moc04g00010 vs. ExPASy Swiss-Prot
Match: Q9SIV5 (Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=NERD PE=1 SV=3)

HSP 1 Score: 70.1 bits (170), Expect = 2.5e-11
Identity = 53/158 (33.54%), Postives = 87/158 (55.06%), Query Frame = 0


Query: 5    EKISRHDVTSIINDSDETENLSNTFKRDNGITPGRKLNQKTR---VLVNPNSY---FAAI 64
            E+    D+   I D++E  ++      D+ +  G+   +KTR   V     S    FAA+
Sbjct: 886  EQNQADDIQGDIVDTEEPNHVDVDENLDHPVKSGKDKKRKTRKKNVRKGRQSNLDDFAAV 945

Query: 65   VPGNINLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKI 124
               NINL+YLR+SLVEDLL+D   FE K+  +FVR++   +   +++ ++LVQV+G  K 
Sbjct: 946  DMHNINLIYLRRSLVEDLLEDSTAFEEKVASAFVRLRISGNQ--KQDLYRLVQVVGTSKA 1005

Query: 125  SIS---GDLSTKFILHASNVMKD--ISICMLSDEKFSE 152
                  G  +T ++L   N+ K   ISI ++S++ F+E
Sbjct: 1006 PEPYKVGKKTTDYVLEILNLDKTEVISIDIISNQDFTE 1041

[Close]

BLAST of Moc04g00010 vs. ExPASy Swiss-Prot
Match: Q9SD34 (Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana OX=3702 GN=At3g51120 PE=2 SV=3)

HSP 1 Score: 62.4 bits (150), Expect = 5.3e-09
Identity = 51/153 (33.33%), Postives = 78/153 (50.98%), Query Frame = 0


Query: 6   KISRHDVTSIINDSDETENLSNTFKRDNGITPGRKLNQKT--RVLVNPNSYFAAIVPGNI 65
           K +  + T  +    E +++ +   RD      RK+ +KT  RV       +AAI   NI
Sbjct: 404 KTTNGETTHAVPSQIEEDSVHDPMVRDR----RRKMRRKTDGRVQNENLDAYAAIDVHNI 463

Query: 66  NLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISIS-- 125
           NL+YLR+  +E LL D    + K++G+ +RIK    D  + + H+LVQV+G  K   S  
Sbjct: 464 NLIYLRRKFLESLLDDINKVDEKVVGTILRIKVSGSDQ-KLDIHRLVQVVGTSKAIASYQ 523

Query: 126 -GDLSTKFILHASNVMKD--ISICMLSDEKFSE 152
            G  +T  +L   N+ K   ISI  LSD+  +E
Sbjct: 524 LGAKTTDVMLEILNLDKREVISIDQLSDQNITE 551

[Close]

BLAST of Moc04g00010 vs. ExPASy TrEMBL
Match: A0A6J1D2W8 (uncharacterized protein At5g08430 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111016836 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 6.2e-77
Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   KDISEKISRHDVTSIINDSDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVP 60
           KDISEKISRHDVTSIINDSDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVP
Sbjct: 48  KDISEKISRHDVTSIINDSDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVP 107

Query: 61  GNINLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISI 120
           GNINLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISI
Sbjct: 108 GNINLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISI 167

Query: 121 SGDLSTKFILHASNVMKDISICMLSDEKFSEK 153
           SGDLSTKFILHASNVMKDISICMLSDEKFSE+
Sbjct: 168 SGDLSTKFILHASNVMKDISICMLSDEKFSEE 199

[Close]

BLAST of Moc04g00010 vs. ExPASy TrEMBL
Match: A0A6J1D418 (uncharacterized protein At5g08430 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016836 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.8e-68
Identity = 150/210 (71.43%), Postives = 152/210 (72.38%), Query Frame = 0


Query: 1   KDISEKISRHDVTSIIND------------------------------------------ 60
           KDISEKISRHDVTSIIN+                                          
Sbjct: 48  KDISEKISRHDVTSIINEYVNINNLLHPSRKKRIICDDRLLSIFGRKTIGRIKIHDMLEP 107

Query: 61  ----------------SDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVPGN 120
                           SDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVPGN
Sbjct: 108 HFAENQDESDDDFSCSSDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVPGN 167

Query: 121 INLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISG 153
           INLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISG
Sbjct: 168 INLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISG 227

[Close]

BLAST of Moc04g00010 vs. ExPASy TrEMBL
Match: A0A6J1D317 (uncharacterized protein At5g08430 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016836 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.8e-68
Identity = 150/210 (71.43%), Postives = 152/210 (72.38%), Query Frame = 0


Query: 1   KDISEKISRHDVTSIIND------------------------------------------ 60
           KDISEKISRHDVTSIIN+                                          
Sbjct: 48  KDISEKISRHDVTSIINEYVNINNLLHPSRKKRIICDDRLLSIFGRKTIGRIKIHDMLEP 107

Query: 61  ----------------SDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVPGN 120
                           SDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVPGN
Sbjct: 108 HFAENQDESDDDFSCSSDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVPGN 167

Query: 121 INLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISG 153
           INLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISG
Sbjct: 168 INLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISG 227

[Close]

BLAST of Moc04g00010 vs. ExPASy TrEMBL
Match: A0A6J1D1W3 (uncharacterized protein At5g08430 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111016836 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.4e-67
Identity = 133/134 (99.25%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 19  SDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVPGNINLVYLRKSLVEDLLK 78
           SDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVPGNINLVYLRKSLVEDLLK
Sbjct: 21  SDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVPGNINLVYLRKSLVEDLLK 80

Query: 79  DPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISGDLSTKFILHASNVMKD 138
           DPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISGDLSTKFILHASNVMKD
Sbjct: 81  DPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISGDLSTKFILHASNVMKD 140

Query: 139 ISICMLSDEKFSEK 153
           ISICMLSDEKFSE+
Sbjct: 141 ISICMLSDEKFSEE 154

[Close]

BLAST of Moc04g00010 vs. ExPASy TrEMBL
Match: A0A6J1GLS0 (uncharacterized protein At5g08430 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455126 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.5e-56
Identity = 112/134 (83.58%), Postives = 123/134 (91.79%), Query Frame = 0


Query: 19  SDETENLSNTFKRDNGITPGRKLNQKTRVLVNPNSYFAAIVPGNINLVYLRKSLVEDLLK 78
           SDETENL NT KR+NG TPGRKL+QKTRVLVNPN+ FAA+ PGNINLVYLRKSLVEDL+K
Sbjct: 21  SDETENLLNTLKRENGKTPGRKLSQKTRVLVNPNTSFAAMAPGNINLVYLRKSLVEDLVK 80

Query: 79  DPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISGDLSTKFILHASNVMKD 138
           D  TFESKLIGSFVRI+SDPHDYLQKNTHQLVQV GVKK+SI GDL T+F+LH SNVMKD
Sbjct: 81  DHETFESKLIGSFVRIRSDPHDYLQKNTHQLVQVTGVKKVSIPGDLGTRFLLHVSNVMKD 140

Query: 139 ISICMLSDEKFSEK 153
           +SICMLSDEKFSE+
Sbjct: 141 VSICMLSDEKFSEE 154

[Close]

BLAST of Moc04g00010 vs. TAIR 10
Match: AT5G08430.1 (SWIB/MDM2 domain;Plus-3;GYF )

HSP 1 Score: 121.7 bits (304), Expect = 5.2e-28
Identity = 65/119 (54.62%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 35  ITPGRKLNQKT-RVLVNPNSYFAAIVPGNINLVYLRKSLVEDLLKDPGTFESKLIGSFVR 94
           I    K+ ++T +V+  P   FAAIV  NI L+YLRKSLV++LLK P TFE K++GSFVR
Sbjct: 127 ICHSEKIAKRTSKVVKKPRGTFAAIVSDNIKLLYLRKSLVQELLKSPDTFEGKMLGSFVR 186

Query: 95  IKSDPHDYLQKNTHQLVQVIGVKKISISGDLSTKFILHASNVMKDISICMLSDEKFSEK 153
           IKSDP+DYLQK  +QLVQV GVKK   + D    F+L  +N +KD+SI +LSD+ FS++
Sbjct: 187 IKSDPNDYLQKYPYQLVQVTGVKKEHGTDD----FLLQVTNYVKDVSISVLSDDNFSQE 241

[Close]

BLAST of Moc04g00010 vs. TAIR 10
Match: AT5G23480.1 (SWIB/MDM2 domain;Plus-3;GYF )

HSP 1 Score: 75.1 bits (183), Expect = 5.6e-14
Identity = 48/111 (43.24%), Postives = 67/111 (60.36%), Query Frame = 0


Query: 43  QKTRVLVNPNSYFAAIVPGNINLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYL 102
           Q  +V+  P   FAAIV   + L+YLRKSLV++L K P TFESK++ +FVRI        
Sbjct: 139 QTKQVVSKPRGTFAAIVRDTVKLLYLRKSLVQELAKTPETFESKVVRTFVRI-------- 198

Query: 103 QKNTHQLVQVIGVKK-ISISGDLSTKFILHASNVMKDISICMLSDEKFSEK 153
            KN  QLV V GVK+   I G+L    + + S  +KD++   LSD+ FS++
Sbjct: 199 -KNPCQLVHVTGVKEGDPIDGNLFQ--VTNYSYYLKDVTTSSLSDDDFSQE 238

[Close]

BLAST of Moc04g00010 vs. TAIR 10
Match: AT5G63700.1 (zinc ion binding;DNA binding )

HSP 1 Score: 74.3 bits (181), Expect = 9.6e-14
Identity = 40/98 (40.82%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 55  FAAIVPGNINLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIG 114
           FA I   N+ LVYLRKSLV +LLK   +F  K++GSFV++K+ P D++    +Q++QV G
Sbjct: 399 FATINADNLKLVYLRKSLVLELLKQNDSFVDKVVGSFVKVKNGPRDFM---AYQILQVTG 458

Query: 115 VKKISISGDLSTKFILHASNVMKDISICMLSDEKFSEK 153
           +K    + D S   +LH S +   +SI  L D    E+
Sbjct: 459 IKN---ADDQSEGVLLHVSGMASGVSISKLDDSDIREE 490

[Close]

BLAST of Moc04g00010 vs. TAIR 10
Match: AT2G16485.1 (nucleic acid binding;zinc ion binding;DNA binding )

HSP 1 Score: 70.1 bits (170), Expect = 1.8e-12
Identity = 53/158 (33.54%), Postives = 87/158 (55.06%), Query Frame = 0


Query: 5    EKISRHDVTSIINDSDETENLSNTFKRDNGITPGRKLNQKTR---VLVNPNSY---FAAI 64
            E+    D+   I D++E  ++      D+ +  G+   +KTR   V     S    FAA+
Sbjct: 886  EQNQADDIQGDIVDTEEPNHVDVDENLDHPVKSGKDKKRKTRKKNVRKGRQSNLDDFAAV 945

Query: 65   VPGNINLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKI 124
               NINL+YLR+SLVEDLL+D   FE K+  +FVR++   +   +++ ++LVQV+G  K 
Sbjct: 946  DMHNINLIYLRRSLVEDLLEDSTAFEEKVASAFVRLRISGNQ--KQDLYRLVQVVGTSKA 1005

Query: 125  SIS---GDLSTKFILHASNVMKD--ISICMLSDEKFSE 152
                  G  +T ++L   N+ K   ISI ++S++ F+E
Sbjct: 1006 PEPYKVGKKTTDYVLEILNLDKTEVISIDIISNQDFTE 1041

[Close]

BLAST of Moc04g00010 vs. TAIR 10
Match: AT3G51120.1 (DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding )

HSP 1 Score: 62.4 bits (150), Expect = 3.8e-10
Identity = 51/153 (33.33%), Postives = 78/153 (50.98%), Query Frame = 0


Query: 6   KISRHDVTSIINDSDETENLSNTFKRDNGITPGRKLNQKT--RVLVNPNSYFAAIVPGNI 65
           K +  + T  +    E +++ +   RD      RK+ +KT  RV       +AAI   NI
Sbjct: 404 KTTNGETTHAVPSQIEEDSVHDPMVRDR----RRKMRRKTDGRVQNENLDAYAAIDVHNI 463

Query: 66  NLVYLRKSLVEDLLKDPGTFESKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISIS-- 125
           NL+YLR+  +E LL D    + K++G+ +RIK    D  + + H+LVQV+G  K   S  
Sbjct: 464 NLIYLRRKFLESLLDDINKVDEKVVGTILRIKVSGSDQ-KLDIHRLVQVVGTSKAIASYQ 523

Query: 126 -GDLSTKFILHASNVMKD--ISICMLSDEKFSE 152
            G  +T  +L   N+ K   ISI  LSD+  +E
Sbjct: 524 LGAKTTDVMLEILNLDKREVISIDQLSDQNITE 551

The following BLAST results are available for this feature:

BLAST of Moc04g00010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148064.1	1.3e-76	99.34	uncharacterized protein At5g08430 isoform X3 [Momordica charantia]	[more]
XP_022148062.1	3.7e-68	71.43	uncharacterized protein At5g08430 isoform X1 [Momordica charantia]	[more]
XP_022148063.1	3.7e-68	71.43	uncharacterized protein At5g08430 isoform X2 [Momordica charantia]	[more]
XP_022148065.1	7.0e-67	99.25	uncharacterized protein At5g08430 isoform X4 [Momordica charantia]	[more]
KAG6572491.1	1.1e-56	85.07	Zinc finger CCCH domain-containing protein 37, partial [Cucurbita argyrosperma s...	[more]

BLAST of Moc04g00010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FT92	7.4e-27	54.62	Uncharacterized protein At5g08430 OS=Arabidopsis thaliana OX=3702 GN=At5g08430 P...	[more]
Q9SIV5	2.5e-11	33.54	Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9SD34	5.3e-09	33.33	Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Moc04g00010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D2W8	6.2e-77	99.34	uncharacterized protein At5g08430 isoform X3 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1D418	1.8e-68	71.43	uncharacterized protein At5g08430 isoform X1 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1D317	1.8e-68	71.43	uncharacterized protein At5g08430 isoform X2 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1D1W3	3.4e-67	99.25	uncharacterized protein At5g08430 isoform X4 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1GLS0	3.5e-56	83.58	uncharacterized protein At5g08430 isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Moc04g00010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08430.1	5.2e-28	54.62	SWIB/MDM2 domain;Plus-3;GYF	[more]
AT5G23480.1	5.6e-14	43.24	SWIB/MDM2 domain;Plus-3;GYF	[more]
AT5G63700.1	9.6e-14	40.82	zinc ion binding;DNA binding	[more]
AT2G16485.1	1.8e-12	33.54	nucleic acid binding;zinc ion binding;DNA binding	[more]
AT3G51120.1	3.8e-10	33.33	DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004343	Plus-3 domain	SMART	SM00719	rtf1	coord: 57..155 e-value: 5.3E-26 score: 102.4
IPR004343	Plus-3 domain	PFAM	PF03126	Plus-3	coord: 62..152 e-value: 2.0E-11 score: 44.4
IPR004343	Plus-3 domain	PROSITE	PS51360	PLUS3	coord: 57..157 score: 21.087416
IPR036128	Plus3-like superfamily	GENE3D	3.90.70.200		coord: 60..155 e-value: 2.2E-17 score: 65.1
IPR036128	Plus3-like superfamily	SUPERFAMILY	159042	Plus3-like	coord: 58..152
None	No IPR available	PANTHER	PTHR46851	OS01G0884500 PROTEIN	coord: 20..151
None	No IPR available	PANTHER	PTHR46851:SF11	OS01G0884500 PROTEIN	coord: 20..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g00010.1	Moc04g00010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding