Moc03g27310 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g27310
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	trafficking protein particle complex subunit 13
Location	chr3: 19620178 .. 19620869 (-)
RNA-Seq Expression	Moc03g27310
Synteny	Moc03g27310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGGTTCCCAGGGATCGCACTCACTCGCCTTCAGGGTCATGAGGCTTTGTAGGCCGTCATTTCAAGTCGAACCTCCTCTCCGCCTCGATCCGGTCGATTTAGTTGTCGGCGAGGACATCTTTGACGATCCAGAGGCCGCCAACCAACTCCCCCGTCTCTTAGAAGCTCAGTTGTCCGATAATTCCGACTCCGATCTCAGCTATAGTTCCAGATTCCTTCTTCATGACTTCTCTGATGCTATGGGCCTCACTGGCCTCCTCGTACTCCCCCAAGCATTCGGGTCTCTCTCTATTTCTTTACCCCTCTCTTCTTTCATTCAATGGATGGACTAATCTGTATGTTTCTTTCTTTATTTTTGGGCGTATGAACGGTGACCGTCTTCCAGGGCGATTTACTTGGGCGAGACTTTCTGTAGCTATATCAGTGTGAACAATAGCTCCAATTTTGAAGTCAGGGACGTTATAATCAAGGTCACCGGCAGTGGGAGTGTTTTCTTTTAAGTTTTAGAATTTGGGTTCTGCTTCATTCACTCTGATTTATGGTTTACGGGGAGTTTAGTTTAGAACTTTCTGTACAGGCAGAAATTCAAACGGAGAGGCAGAGGATTCTTCTTTTGGATTCATCAAAATCCCCTGTCGAAACAATTCGTGCTGGGGCCGTTATGACTTCATTGTCGAACACGATGTGA

mRNA sequence

ATGAGCGGTTCCCAGGGATCGCACTCACTCGCCTTCAGGGTCATGAGGCTTTGTAGGCCGTCATTTCAAGTCGAACCTCCTCTCCGCCTCGATCCGGTCGATTTAGTTGTCGGCGAGGACATCTTTGACGATCCAGAGGCCGCCAACCAACTCCCCCGTCTCTTAGAAGCTCAGTTGTCCGATAATTCCGACTCCGATCTCAGCTATAGTTCCAGATTCCTTCTTCATGACTTCTCTGATGCTATGGGCCTCACTGGCCTCCTCGTACTCCCCCAAGCATTCGGGGCGATTTACTTGGGCGAGACTTTCTGTAGCTATATCAGTGTGAACAATAGCTCCAATTTTGAAGTCAGGGACGTTATAATCAAGGCAGAAATTCAAACGGAGAGGCAGAGGATTCTTCTTTTGGATTCATCAAAATCCCCTGTCGAAACAATTCGTGCTGGGGCCGTTATGACTTCATTGTCGAACACGATGTGA

Coding sequence (CDS)

ATGAGCGGTTCCCAGGGATCGCACTCACTCGCCTTCAGGGTCATGAGGCTTTGTAGGCCGTCATTTCAAGTCGAACCTCCTCTCCGCCTCGATCCGGTCGATTTAGTTGTCGGCGAGGACATCTTTGACGATCCAGAGGCCGCCAACCAACTCCCCCGTCTCTTAGAAGCTCAGTTGTCCGATAATTCCGACTCCGATCTCAGCTATAGTTCCAGATTCCTTCTTCATGACTTCTCTGATGCTATGGGCCTCACTGGCCTCCTCGTACTCCCCCAAGCATTCGGGGCGATTTACTTGGGCGAGACTTTCTGTAGCTATATCAGTGTGAACAATAGCTCCAATTTTGAAGTCAGGGACGTTATAATCAAGGCAGAAATTCAAACGGAGAGGCAGAGGATTCTTCTTTTGGATTCATCAAAATCCCCTGTCGAAACAATTCGTGCTGGGGCCGTTATGACTTCATTGTCGAACACGATGTGA

Protein sequence

MSGSQGSHSLAFRVMRLCRPSFQVEPPLRLDPVDLVVGEDIFDDPEAANQLPRLLEAQLSDNSDSDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDVIIKAEIQTERQRILLLDSSKSPVETIRAGAVMTSLSNTM

Homology

[Close]

BLAST of Moc03g27310 vs. NCBI nr
Match: XP_022140024.1 (trafficking protein particle complex subunit 13 [Momordica charantia])

HSP 1 Score: 289.7 bits (740), Expect = 1.6e-74
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MSGSQGSHSLAFRVMRLCRPSFQVEPPLRLDPVDLVVGEDIFDDPEAANQLPRLLEAQLS 60
           MSGSQGSHSLAFRVMRLCRPSFQVEPPLRLDPVDLVVGEDIFDDPEAANQLPRLLEAQLS
Sbjct: 1   MSGSQGSHSLAFRVMRLCRPSFQVEPPLRLDPVDLVVGEDIFDDPEAANQLPRLLEAQLS 60

Query: 61  DNSDSDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120
           DNSDSDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV
Sbjct: 61  DNSDSDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAG 150
           IIKAEIQTERQRILLLDSSKSPVETIRAG
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAG 149

[Close]

BLAST of Moc03g27310 vs. NCBI nr
Match: XP_038894570.1 (trafficking protein particle complex subunit 13 isoform X1 [Benincasa hispida])

HSP 1 Score: 271.6 bits (693), Expect = 4.4e-69
Identity = 140/149 (93.96%), Postives = 144/149 (96.64%), Query Frame = 0


Query: 1   MSGSQGSHSLAFRVMRLCRPSFQVEPPLRLDPVDLVVGEDIFDDPEAANQLPRLLEAQLS 60
           MSG+QGSHSLAFRVMRLCRPSFQV+PPLRLDPVDLV GEDI DDP AA QLPRLLEAQLS
Sbjct: 1   MSGAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLVAGEDILDDPVAAYQLPRLLEAQLS 60

Query: 61  DNSDSDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120
           D+SDSDLSYSSRF+LHD SDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV
Sbjct: 61  DDSDSDLSYSSRFVLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAG 150
           IIKAEIQTERQRILLLDSSKSPVETIRAG
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAG 149

[Close]

BLAST of Moc03g27310 vs. NCBI nr
Match: XP_038894571.1 (trafficking protein particle complex subunit 13 isoform X2 [Benincasa hispida])

HSP 1 Score: 271.6 bits (693), Expect = 4.4e-69
Identity = 140/149 (93.96%), Postives = 144/149 (96.64%), Query Frame = 0


Query: 1   MSGSQGSHSLAFRVMRLCRPSFQVEPPLRLDPVDLVVGEDIFDDPEAANQLPRLLEAQLS 60
           MSG+QGSHSLAFRVMRLCRPSFQV+PPLRLDPVDLV GEDI DDP AA QLPRLLEAQLS
Sbjct: 1   MSGAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLVAGEDILDDPVAAYQLPRLLEAQLS 60

Query: 61  DNSDSDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120
           D+SDSDLSYSSRF+LHD SDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV
Sbjct: 61  DDSDSDLSYSSRFVLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAG 150
           IIKAEIQTERQRILLLDSSKSPVETIRAG
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAG 149

[Close]

BLAST of Moc03g27310 vs. NCBI nr
Match: TYK26403.1 (trafficking protein particle complex subunit 13 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 269.2 bits (687), Expect = 2.2e-68
Identity = 138/149 (92.62%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MSGSQGSHSLAFRVMRLCRPSFQVEPPLRLDPVDLVVGEDIFDDPEAANQLPRLLEAQLS 60
           MS +QGSHSLAFRVMRLCRPSFQV+PPLR+DPVDL+VGEDI DDP AANQLPRLL AQ S
Sbjct: 1   MSSTQGSHSLAFRVMRLCRPSFQVDPPLRIDPVDLLVGEDILDDPVAANQLPRLLAAQFS 60

Query: 61  DNSDSDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120
           D+SDSDLSYSSRFLLHD SDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV
Sbjct: 61  DDSDSDLSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAG 150
           IIKAEIQTERQRILLLDSSKSPVETIRAG
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAG 149

[Close]

BLAST of Moc03g27310 vs. NCBI nr
Match: XP_016899912.1 (PREDICTED: trafficking protein particle complex subunit 13 isoform X3 [Cucumis melo])

HSP 1 Score: 269.2 bits (687), Expect = 2.2e-68
Identity = 138/149 (92.62%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MSGSQGSHSLAFRVMRLCRPSFQVEPPLRLDPVDLVVGEDIFDDPEAANQLPRLLEAQLS 60
           MS +QGSHSLAFRVMRLCRPSFQV+PPLR+DPVDL+VGEDI DDP AANQLPRLL AQ S
Sbjct: 1   MSSTQGSHSLAFRVMRLCRPSFQVDPPLRIDPVDLLVGEDILDDPVAANQLPRLLAAQFS 60

Query: 61  DNSDSDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120
           D+SDSDLSYSSRFLLHD SDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV
Sbjct: 61  DDSDSDLSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAG 150
           IIKAEIQTERQRILLLDSSKSPVETIRAG
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAG 149

[Close]

BLAST of Moc03g27310 vs. ExPASy Swiss-Prot
Match: A5PLN9 (Trafficking protein particle complex subunit 13 OS=Homo sapiens OX=9606 GN=TRAPPC13 PE=1 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-11
Identity = 47/140 (33.57%), Postives = 70/140 (50.00%), Query Frame = 0


Query: 8   HSLAFRVMRLCRPSFQVEPPLRLDPVDL---VVGEDIFDDPEAANQLPRLLEAQLSDNSD 67
           H LA +VMRL +P+     P+  +  DL   +  + + DDP   N               
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKDLPGDLFNQLMRDDPSTVNG-------------- 69

Query: 68  SDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDVIIKA 127
                         ++ + L  +L LPQ FG I+LGETF SYISV+N SN  V+D+++KA
Sbjct: 70  --------------AEVLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKA 121

Query: 128 EIQTERQRILLLDSSKSPVE 145
           ++QT  QR+ L  S+ +  E
Sbjct: 130 DLQTSSQRLNLSASNAAVAE 121

[Close]

BLAST of Moc03g27310 vs. ExPASy Swiss-Prot
Match: A7MB76 (Trafficking protein particle complex subunit 13 OS=Bos taurus OX=9913 GN=TRAPPC13 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.0e-11
Identity = 47/140 (33.57%), Postives = 70/140 (50.00%), Query Frame = 0


Query: 8   HSLAFRVMRLCRPSFQVEPPLRLDPVDL---VVGEDIFDDPEAANQLPRLLEAQLSDNSD 67
           H LA +VMRL +P+     P+  +  DL   +  + + DDP   N               
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKDLPGDLFNQLMRDDPSTVNG-------------- 69

Query: 68  SDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDVIIKA 127
                         ++ + L  +L LPQ FG I+LGETF SYISV+N SN  V+D+++KA
Sbjct: 70  --------------AEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKA 121

Query: 128 EIQTERQRILLLDSSKSPVE 145
           ++QT  QR+ L  S+ +  E
Sbjct: 130 DLQTSSQRLNLSASNAAVAE 121

[Close]

BLAST of Moc03g27310 vs. ExPASy Swiss-Prot
Match: Q3TIR1 (Trafficking protein particle complex subunit 13 OS=Mus musculus OX=10090 GN=Trappc13 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.0e-11
Identity = 47/140 (33.57%), Postives = 70/140 (50.00%), Query Frame = 0


Query: 8   HSLAFRVMRLCRPSFQVEPPLRLDPVDL---VVGEDIFDDPEAANQLPRLLEAQLSDNSD 67
           H LA +VMRL +P+     P+  +  DL   +  + + DDP   N               
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKDLPGDLFNQLMKDDPSTVNG-------------- 69

Query: 68  SDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDVIIKA 127
                         ++ + L  +L LPQ FG I+LGETF SYISV+N SN  V+D+++KA
Sbjct: 70  --------------AEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKA 121

Query: 128 EIQTERQRILLLDSSKSPVE 145
           ++QT  QR+ L  S+ +  E
Sbjct: 130 DLQTSSQRLNLSASNAAVAE 121

[Close]

BLAST of Moc03g27310 vs. ExPASy Swiss-Prot
Match: Q5RCG0 (Trafficking protein particle complex subunit 13 OS=Pongo abelii OX=9601 GN=TRAPPC13 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.0e-11
Identity = 47/140 (33.57%), Postives = 70/140 (50.00%), Query Frame = 0


Query: 8   HSLAFRVMRLCRPSFQVEPPLRLDPVDL---VVGEDIFDDPEAANQLPRLLEAQLSDNSD 67
           H LA +VMRL +P+     P+  +  DL   +  + + DDP   N               
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEERDLPGDLFNQLMRDDPSTVNG-------------- 69

Query: 68  SDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDVIIKA 127
                         ++ + L  +L LPQ FG I+LGETF SYISV+N SN  V+D+++KA
Sbjct: 70  --------------AEVLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKA 121

Query: 128 EIQTERQRILLLDSSKSPVE 145
           ++QT  QR+ L  S+ +  E
Sbjct: 130 DLQTSSQRLNLSASNAAVAE 121

[Close]

BLAST of Moc03g27310 vs. ExPASy Swiss-Prot
Match: Q5M887 (Trafficking protein particle complex subunit 13 OS=Rattus norvegicus OX=10116 GN=Trappc13 PE=2 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 2.0e-11
Identity = 47/140 (33.57%), Postives = 70/140 (50.00%), Query Frame = 0


Query: 8   HSLAFRVMRLCRPSFQVEPPLRLDPVDL---VVGEDIFDDPEAANQLPRLLEAQLSDNSD 67
           H LA +VMRL +P+     P+  +  DL   +  + + DDP   N               
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKDLPGDLFNQLMKDDPSTVNG-------------- 69

Query: 68  SDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDVIIKA 127
                         ++ + L  +L LPQ FG I+LGETF SYISV+N SN  V+D+++KA
Sbjct: 70  --------------AEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKA 121

Query: 128 EIQTERQRILLLDSSKSPVE 145
           ++QT  QR+ L  S+ +  E
Sbjct: 130 DLQTSSQRLNLSASNAAVAE 121

[Close]

BLAST of Moc03g27310 vs. ExPASy TrEMBL
Match: A0A6J1CEK7 (trafficking protein particle complex subunit 13 OS=Momordica charantia OX=3673 GN=LOC111010780 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 7.6e-75
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MSGSQGSHSLAFRVMRLCRPSFQVEPPLRLDPVDLVVGEDIFDDPEAANQLPRLLEAQLS 60
           MSGSQGSHSLAFRVMRLCRPSFQVEPPLRLDPVDLVVGEDIFDDPEAANQLPRLLEAQLS
Sbjct: 1   MSGSQGSHSLAFRVMRLCRPSFQVEPPLRLDPVDLVVGEDIFDDPEAANQLPRLLEAQLS 60

Query: 61  DNSDSDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120
           DNSDSDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV
Sbjct: 61  DNSDSDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAG 150
           IIKAEIQTERQRILLLDSSKSPVETIRAG
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAG 149

[Close]

BLAST of Moc03g27310 vs. ExPASy TrEMBL
Match: A0A5D3DS43 (Trafficking protein particle complex subunit 13 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00660 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68
Identity = 138/149 (92.62%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MSGSQGSHSLAFRVMRLCRPSFQVEPPLRLDPVDLVVGEDIFDDPEAANQLPRLLEAQLS 60
           MS +QGSHSLAFRVMRLCRPSFQV+PPLR+DPVDL+VGEDI DDP AANQLPRLL AQ S
Sbjct: 1   MSSTQGSHSLAFRVMRLCRPSFQVDPPLRIDPVDLLVGEDILDDPVAANQLPRLLAAQFS 60

Query: 61  DNSDSDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120
           D+SDSDLSYSSRFLLHD SDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV
Sbjct: 61  DDSDSDLSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAG 150
           IIKAEIQTERQRILLLDSSKSPVETIRAG
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAG 149

[Close]

BLAST of Moc03g27310 vs. ExPASy TrEMBL
Match: A0A1S4DVA1 (trafficking protein particle complex subunit 13 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103486246 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68
Identity = 138/149 (92.62%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MSGSQGSHSLAFRVMRLCRPSFQVEPPLRLDPVDLVVGEDIFDDPEAANQLPRLLEAQLS 60
           MS +QGSHSLAFRVMRLCRPSFQV+PPLR+DPVDL+VGEDI DDP AANQLPRLL AQ S
Sbjct: 1   MSSTQGSHSLAFRVMRLCRPSFQVDPPLRIDPVDLLVGEDILDDPVAANQLPRLLAAQFS 60

Query: 61  DNSDSDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120
           D+SDSDLSYSSRFLLHD SDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV
Sbjct: 61  DDSDSDLSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAG 150
           IIKAEIQTERQRILLLDSSKSPVETIRAG
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAG 149

[Close]

BLAST of Moc03g27310 vs. ExPASy TrEMBL
Match: A0A1S3B514 (trafficking protein particle complex subunit 13 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486246 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68
Identity = 138/149 (92.62%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MSGSQGSHSLAFRVMRLCRPSFQVEPPLRLDPVDLVVGEDIFDDPEAANQLPRLLEAQLS 60
           MS +QGSHSLAFRVMRLCRPSFQV+PPLR+DPVDL+VGEDI DDP AANQLPRLL AQ S
Sbjct: 1   MSSTQGSHSLAFRVMRLCRPSFQVDPPLRIDPVDLLVGEDILDDPVAANQLPRLLAAQFS 60

Query: 61  DNSDSDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120
           D+SDSDLSYSSRFLLHD SDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV
Sbjct: 61  DDSDSDLSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAG 150
           IIKAEIQTERQRILLLDSSKSPVETIRAG
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAG 149

[Close]

BLAST of Moc03g27310 vs. ExPASy TrEMBL
Match: A0A1S4DV98 (trafficking protein particle complex subunit 13 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486246 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68
Identity = 138/149 (92.62%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MSGSQGSHSLAFRVMRLCRPSFQVEPPLRLDPVDLVVGEDIFDDPEAANQLPRLLEAQLS 60
           MS +QGSHSLAFRVMRLCRPSFQV+PPLR+DPVDL+VGEDI DDP AANQLPRLL AQ S
Sbjct: 1   MSSTQGSHSLAFRVMRLCRPSFQVDPPLRIDPVDLLVGEDILDDPVAANQLPRLLAAQFS 60

Query: 61  DNSDSDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120
           D+SDSDLSYSSRFLLHD SDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV
Sbjct: 61  DDSDSDLSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAG 150
           IIKAEIQTERQRILLLDSSKSPVETIRAG
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAG 149

[Close]

BLAST of Moc03g27310 vs. TAIR 10
Match: AT2G47960.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF974 (InterPro:IPR010378); Has 285 Blast hits to 284 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 68; Plants - 32; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). )

HSP 1 Score: 198.0 bits (502), Expect = 5.8e-51
Identity = 102/146 (69.86%), Postives = 121/146 (82.88%), Query Frame = 0


Query: 4   SQGSHSLAFRVMRLCRPSFQVEPPLRLDPVDLVVGEDIFDDPEAANQLPRLLEAQLSDNS 63
           + G HSLAFRVMRLC+PSF V+PPLR+DP DL+ GED  DDP +A+   R + +  +D  
Sbjct: 8   THGPHSLAFRVMRLCKPSFHVDPPLRIDPFDLLAGEDFSDDPSSASLFRRHVSS--ADAV 67

Query: 64  DSDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDVIIK 123
           DSDLSY +RFLL+  +D +GL+GLL+LPQ+FGAIYLGETFCSYISVNNSS  EVRDV IK
Sbjct: 68  DSDLSYRNRFLLNHPTDPIGLSGLLLLPQSFGAIYLGETFCSYISVNNSSTSEVRDVTIK 127

Query: 124 AEIQTERQRILLLDSSKSPVETIRAG 150
           AEIQTERQRILLLD+SKSPVE+IR G
Sbjct: 128 AEIQTERQRILLLDTSKSPVESIRTG 151

The following BLAST results are available for this feature:

BLAST of Moc03g27310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140024.1	1.6e-74	100.00	trafficking protein particle complex subunit 13 [Momordica charantia]	[more]
XP_038894570.1	4.4e-69	93.96	trafficking protein particle complex subunit 13 isoform X1 [Benincasa hispida]	[more]
XP_038894571.1	4.4e-69	93.96	trafficking protein particle complex subunit 13 isoform X2 [Benincasa hispida]	[more]
TYK26403.1	2.2e-68	92.62	trafficking protein particle complex subunit 13 isoform X1 [Cucumis melo var. ma...	[more]
XP_016899912.1	2.2e-68	92.62	PREDICTED: trafficking protein particle complex subunit 13 isoform X3 [Cucumis m...	[more]

BLAST of Moc03g27310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A5PLN9	1.5e-11	33.57	Trafficking protein particle complex subunit 13 OS=Homo sapiens OX=9606 GN=TRAPP...	[more]
A7MB76	2.0e-11	33.57	Trafficking protein particle complex subunit 13 OS=Bos taurus OX=9913 GN=TRAPPC1...	[more]
Q3TIR1	2.0e-11	33.57	Trafficking protein particle complex subunit 13 OS=Mus musculus OX=10090 GN=Trap...	[more]
Q5RCG0	2.0e-11	33.57	Trafficking protein particle complex subunit 13 OS=Pongo abelii OX=9601 GN=TRAPP...	[more]
Q5M887	2.0e-11	33.57	Trafficking protein particle complex subunit 13 OS=Rattus norvegicus OX=10116 GN...	[more]

BLAST of Moc03g27310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CEK7	7.6e-75	100.00	trafficking protein particle complex subunit 13 OS=Momordica charantia OX=3673 G...	[more]
A0A5D3DS43	1.1e-68	92.62	Trafficking protein particle complex subunit 13 isoform X1 OS=Cucumis melo var. ...	[more]
A0A1S4DVA1	1.1e-68	92.62	trafficking protein particle complex subunit 13 isoform X3 OS=Cucumis melo OX=36...	[more]
A0A1S3B514	1.1e-68	92.62	trafficking protein particle complex subunit 13 isoform X1 OS=Cucumis melo OX=36...	[more]
A0A1S4DV98	1.1e-68	92.62	trafficking protein particle complex subunit 13 isoform X2 OS=Cucumis melo OX=36...	[more]

BLAST of Moc03g27310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47960.1	5.8e-51	69.86	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF974 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010378	Trafficking protein particle complex subunit 13	PFAM	PF06159	DUF974	coord: 88..152 e-value: 7.7E-18 score: 65.2
IPR010378	Trafficking protein particle complex subunit 13	PANTHER	PTHR13134	UNCHARACTERIZED	coord: 1..150
None	No IPR available	PANTHER	PTHR13134:SF4	TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 13-RELATED	coord: 1..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g27310.1	Moc03g27310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:1990072	TRAPPIII protein complex