Moc03g23330 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g23330
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr3: 16546429 .. 16547808 (-)
RNA-Seq Expression	Moc03g23330
Synteny	Moc03g23330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGAAGAAGATCAGAGGACACGAGATAGAGAAGACCCAAGTGCCCTGATGGAGGGGTCAGATTGAAGAAGCAAGAAGAGACGGAGAAGACTAACAGGAGGCACCAAGAATAATGCTGTGCTAGGGGGGCCAAGCAATTGAAATCTCCCAAAGTTGTGAAAAATACGGAACACATTGCCACGGGACTACCTAGTTCTGGCGCTTGACTCAACTCTCAAGAACCTGCTATCAAGGTAACAATCAAACTTACTAATGTCTTAGATCTCTGTTTCAAGGCTCGAAATGCATCTGTAAGTTCCATATTTGTTGTGTCTTTTCCCCCTTGATCTAAACTGTTGTTACTGATAGCTGCCCCTTCTGAGAACTAAATGGAGATACTATACTCAAGTTGGAACCAGAATGGTTCATGCAGACTATCCTCATTCCTTCCCAATAAACTTGTATGGTGAGCAGTAGGTTGACTTTTAAATTCATATAATATTATCAAAATTTTCAAAGAACTCCAAGGAATGTCACTTTCTCCTCACAAAAAATACTAAAATAATAAGTCAATACAATATATTTGACCTGTCTGAGTCATGCCTTCCAAGCCTGAAGAGACAGCCAATCTCTTCTTCTGTTTTCCTTTTGTTTTTTCTGACTTTGTGAATGCCAAGGATGTATTGGGCAGTCCAAAAACAAAATGTCAAAGCCATTGACTTCGATTATTAGAAGTTTTATAATTTTCCAGTCTGAACTCTGTGATAGTAGTGCACATAACATGGTACTATCTTATAATTTCTTATCTCTATTTCCCAGTTGAAGTCGTTGGCTATGCATATTATTATATACAAACAGGTCGTGAAGAAGCAGTGTAATGGCTGGCACGTTCTGATGCCTTGCAAGGGAACATCATCTCAACACCACATGCTATATATATTCGTTAGACTTCCATTTCTTCTCCATTCATTAACAAATATGGGAAACTGCATCGTCTTGCCTTGCAGTCAGTCTCCATCGAAGAAGGTAAGAGGGCTCGGAAAAGCCACTCGGGCGGCTACAACAGTCGATCCTGCTACTGAAAATGGTAATGACCCTCTTCTCCATGCTTTTACTTTGCCAACCAAAGTCAGCCCCCAAATTGGGGAGGTTCAAAATGTTGTTCCATGCCTGAAAGAGCTCGAAAATCTTCTGGTTTCCTCAAAGATAACCTACTCGGATGGGGGAGGAGCAAGGAAGGTGAAAATTGTGGTAACTAAGGAACAGTTTAAGTTGCTGTTGGCAAATGCAAAGAAGTTTCAGTGTCGGCAAAGATTGTTGAGTTATACAGGCCCCCGCAGACGGTGTAAAAAATGGCGGCCGTCGTTGTCTGTCATTTCGGAGGAACAAGATTTTTGA

mRNA sequence

ATGGTGGAAGAAGATCAGAGGACACGAGATAGAGAAGACCCAAGTGCCCTGATGGAGGGTCAGTCTCCATCGAAGAAGGTAAGAGGGCTCGGAAAAGCCACTCGGGCGGCTACAACAGTCGATCCTGCTACTGAAAATGGTAATGACCCTCTTCTCCATGCTTTTACTTTGCCAACCAAAGTCAGCCCCCAAATTGGGGAGGTTCAAAATGTTGTTCCATGCCTGAAAGAGCTCGAAAATCTTCTGGTTTCCTCAAAGATAACCTACTCGGATGGGGGAGGAGCAAGGAAGGTGAAAATTGTGGTAACTAAGGAACAGTTTAAGTTGCTGTTGGCAAATGCAAAGAAGTTTCAGTGTCGGCAAAGATTGTTGAGTTATACAGGCCCCCGCAGACGGTGTAAAAAATGGCGGCCGTCGTTGTCTGTCATTTCGGAGGAACAAGATTTTTGA

Coding sequence (CDS)

ATGGTGGAAGAAGATCAGAGGACACGAGATAGAGAAGACCCAAGTGCCCTGATGGAGGGTCAGTCTCCATCGAAGAAGGTAAGAGGGCTCGGAAAAGCCACTCGGGCGGCTACAACAGTCGATCCTGCTACTGAAAATGGTAATGACCCTCTTCTCCATGCTTTTACTTTGCCAACCAAAGTCAGCCCCCAAATTGGGGAGGTTCAAAATGTTGTTCCATGCCTGAAAGAGCTCGAAAATCTTCTGGTTTCCTCAAAGATAACCTACTCGGATGGGGGAGGAGCAAGGAAGGTGAAAATTGTGGTAACTAAGGAACAGTTTAAGTTGCTGTTGGCAAATGCAAAGAAGTTTCAGTGTCGGCAAAGATTGTTGAGTTATACAGGCCCCCGCAGACGGTGTAAAAAATGGCGGCCGTCGTTGTCTGTCATTTCGGAGGAACAAGATTTTTGA

Protein sequence

MVEEDQRTRDREDPSALMEGQSPSKKVRGLGKATRAATTVDPATENGNDPLLHAFTLPTKVSPQIGEVQNVVPCLKELENLLVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKKFQCRQRLLSYTGPRRRCKKWRPSLSVISEEQDF

Homology

[Close]

BLAST of Moc03g23330 vs. NCBI nr
Match: XP_038877793.1 (uncharacterized protein LOC120070018 isoform X1 [Benincasa hispida])

HSP 1 Score: 181.4 bits (459), Expect = 5.7e-42
Identity = 96/133 (72.18%), Postives = 104/133 (78.20%), Query Frame = 0


Query: 17  LMEGQSPSKKVRGLGKATRAATTVDPATENGNDPLLHAFTLPTKVSPQIGEVQNVVPCLK 76
           LM  Q P KK+R L KAT      D ATE G DPLL  FT PT+   Q+GEVQN+VPCLK
Sbjct: 11  LMPYQLPQKKLRELEKAT------DSATECGKDPLLLDFTSPTRTILQVGEVQNIVPCLK 70

Query: 77  ELENLLVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKKFQCRQRLLSYTGPRRRCKKW 136
           ELENLL SSKI YSDG GARKVKIVVTKEQFKLLLANAKK Q R RLLSYTGPR+ C+KW
Sbjct: 71  ELENLLASSKIAYSDGAGARKVKIVVTKEQFKLLLANAKKLQSRHRLLSYTGPRKGCRKW 130

Query: 137 RPSLSVISEEQDF 150
           RP+LS ISEE+DF
Sbjct: 131 RPTLSAISEEEDF 137

[Close]

BLAST of Moc03g23330 vs. NCBI nr
Match: KGN64995.1 (hypothetical protein Csa_022837 [Cucumis sativus])

HSP 1 Score: 175.6 bits (444), Expect = 3.1e-40
Identity = 94/130 (72.31%), Postives = 103/130 (79.23%), Query Frame = 0


Query: 21  QSPSKKVRGLGKATRAATT-VDPATENGNDPLLHAFTLPTKVSPQIGEVQNVVPCLKELE 80
           +SP KK+RGL KAT  ATT V  ATE GNDPLL  F   TK S Q+ EV+NVVPCLKELE
Sbjct: 11  RSPQKKLRGLKKATELATTIVCSATECGNDPLLKDFKSSTKTSLQVCEVRNVVPCLKELE 70

Query: 81  NLLVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKKFQCRQRLLSYTGPRRRCKKWRPS 140
           NLL S KI YSD  GA+KVKIVVTKEQFKLLL+NAKK Q R RLLSYTGPR+ CK WRP+
Sbjct: 71  NLLASLKIVYSDEAGAKKVKIVVTKEQFKLLLSNAKKLQYRHRLLSYTGPRKGCKNWRPT 130

Query: 141 LSVISEEQDF 150
           LS ISEE+DF
Sbjct: 131 LSAISEEEDF 140

[Close]

BLAST of Moc03g23330 vs. NCBI nr
Match: KAA0042344.1 (hypothetical protein E6C27_scaffold795G00420 [Cucumis melo var. makuwa] >TYK15468.1 hypothetical protein E5676_scaffold477G00390 [Cucumis melo var. makuwa])

HSP 1 Score: 148.7 bits (374), Expect = 4.1e-32
Identity = 82/113 (72.57%), Postives = 90/113 (79.65%), Query Frame = 0


Query: 21  QSPSKKVRGLGKATRAAT-TVDPATENGNDPLLHAFTLPTKVSPQIGEVQNVVPCLKELE 80
           +SP KK++GL KAT  AT  V  A+E GNDPLL      TK S Q+GEV+NVVPCLKELE
Sbjct: 11  RSPQKKLQGLKKATGLATPIVYSASECGNDPLLKYCNSSTKTSLQVGEVRNVVPCLKELE 70

Query: 81  NLLVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKKFQCRQRLLSYTGPRRR 133
           NLL SSKI YSDGGGA+KVKIVVT+EQFKLLLANAKK Q R RLLSYTGPR R
Sbjct: 71  NLLASSKIVYSDGGGAKKVKIVVTREQFKLLLANAKKLQSRYRLLSYTGPRYR 123

[Close]

BLAST of Moc03g23330 vs. NCBI nr
Match: KAG6583721.1 (hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 140.6 bits (353), Expect = 1.1e-29
Identity = 75/102 (73.53%), Postives = 83/102 (81.37%), Query Frame = 0


Query: 21  QSPSKKVRGLGKATRAATTVDPATENGNDPLLHAFTLPTKVSPQIGEVQNVVPCLKELEN 80
           +SP KK+RG+ KAT  ATTVD ATE  ND LLH F+  T+ S Q+GEV++VVPCLKELE 
Sbjct: 11  RSPQKKLRGIEKATDLATTVDSATECCNDHLLHDFSSSTRTSLQVGEVRDVVPCLKELEK 70

Query: 81  LLVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKKFQCRQR 123
           LLVSSKI YSDG GARKVKIVVTKEQFKLLLANAKK Q R R
Sbjct: 71  LLVSSKIVYSDGAGARKVKIVVTKEQFKLLLANAKKLQSRHR 112

[Close]

BLAST of Moc03g23330 vs. NCBI nr
Match: XP_023542404.1 (uncharacterized protein LOC111802317 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 129.8 bits (325), Expect = 2.0e-26
Identity = 76/127 (59.84%), Postives = 84/127 (66.14%), Query Frame = 0


Query: 22  SPSKKVRGLGKATRAATTVDPATENGNDPLLHAFTLPTKVSPQIGEVQNVVPCLKELENL 81
           SPSK +     +   AT VD ATE GNDPLL                 +VVPCLKELENL
Sbjct: 147 SPSKNL-----SPELATVVDSATEQGNDPLL-----------------DVVPCLKELENL 206

Query: 82  LVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKKFQCRQRLLSYTGPRRRCKKWRPSLS 141
           LV  K  YS GGGAR+VKIVVT+EQFKLLLANAKK Q   RLLSY GP R  +KWRP LS
Sbjct: 207 LVYLKTAYSSGGGAREVKIVVTREQFKLLLANAKKMQSAYRLLSYRGPGRGRRKWRPMLS 251

Query: 142 VISEEQD 149
           VISEE++
Sbjct: 267 VISEEEE 251

[Close]

BLAST of Moc03g23330 vs. ExPASy TrEMBL
Match: A0A0A0LSY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173150 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.5e-40
Identity = 94/130 (72.31%), Postives = 103/130 (79.23%), Query Frame = 0


Query: 21  QSPSKKVRGLGKATRAATT-VDPATENGNDPLLHAFTLPTKVSPQIGEVQNVVPCLKELE 80
           +SP KK+RGL KAT  ATT V  ATE GNDPLL  F   TK S Q+ EV+NVVPCLKELE
Sbjct: 11  RSPQKKLRGLKKATELATTIVCSATECGNDPLLKDFKSSTKTSLQVCEVRNVVPCLKELE 70

Query: 81  NLLVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKKFQCRQRLLSYTGPRRRCKKWRPS 140
           NLL S KI YSD  GA+KVKIVVTKEQFKLLL+NAKK Q R RLLSYTGPR+ CK WRP+
Sbjct: 71  NLLASLKIVYSDEAGAKKVKIVVTKEQFKLLLSNAKKLQYRHRLLSYTGPRKGCKNWRPT 130

Query: 141 LSVISEEQDF 150
           LS ISEE+DF
Sbjct: 131 LSAISEEEDF 140

[Close]

BLAST of Moc03g23330 vs. ExPASy TrEMBL
Match: A0A5D3CW41 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00390 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.0e-32
Identity = 82/113 (72.57%), Postives = 90/113 (79.65%), Query Frame = 0


Query: 21  QSPSKKVRGLGKATRAAT-TVDPATENGNDPLLHAFTLPTKVSPQIGEVQNVVPCLKELE 80
           +SP KK++GL KAT  AT  V  A+E GNDPLL      TK S Q+GEV+NVVPCLKELE
Sbjct: 11  RSPQKKLQGLKKATGLATPIVYSASECGNDPLLKYCNSSTKTSLQVGEVRNVVPCLKELE 70

Query: 81  NLLVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKKFQCRQRLLSYTGPRRR 133
           NLL SSKI YSDGGGA+KVKIVVT+EQFKLLLANAKK Q R RLLSYTGPR R
Sbjct: 71  NLLASSKIVYSDGGGAKKVKIVVTREQFKLLLANAKKLQSRYRLLSYTGPRYR 123

[Close]

BLAST of Moc03g23330 vs. ExPASy TrEMBL
Match: A0A6J5UND5 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24534 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.9e-07
Identity = 39/96 (40.62%), Postives = 54/96 (56.25%), Query Frame = 0


Query: 57  LPTKVSPQIGEVQNVVPCLKELENLLVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKK 116
           LP     + GEV ++VP L  L   LV SKI + +    +K+KIVVT+EQ +LLL +A K
Sbjct: 69  LPPNTKLEPGEVYHIVPNLASLGKPLVPSKIVHQESCKRQKIKIVVTREQLELLLKSANK 128

Query: 117 FQCRQRL---LSYTGPRRRCKKWRPSLSVISEEQDF 150
           F+  + +   LS         KWRPSL++I E   F
Sbjct: 129 FRSPKEIGVQLSGRSGLEGSPKWRPSLAIIPEVHSF 164

[Close]

BLAST of Moc03g23330 vs. ExPASy TrEMBL
Match: A0A5E4GL56 (PREDICTED: POPTR_0006s01910g OS=Prunus dulcis OX=3755 GN=ALMOND_2B008489 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 4.9e-07
Identity = 39/96 (40.62%), Postives = 54/96 (56.25%), Query Frame = 0


Query: 57  LPTKVSPQIGEVQNVVPCLKELENLLVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKK 116
           LP     + GEV ++VP L  L   LV SKI + +    +K+KIVVT+EQ +LLL +A K
Sbjct: 57  LPPNTKLEQGEVYHLVPNLASLGKPLVPSKIVHQESCKRQKIKIVVTREQLELLLKSANK 116

Query: 117 FQCRQRL---LSYTGPRRRCKKWRPSLSVISEEQDF 150
           F+  + +   LS         KWRPSL++I E   F
Sbjct: 117 FRSPKEIGVQLSGRSGLEGSPKWRPSLAIIPEVHSF 152

[Close]

BLAST of Moc03g23330 vs. ExPASy TrEMBL
Match: A0A251PDS0 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G005300 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 4.9e-07
Identity = 39/96 (40.62%), Postives = 54/96 (56.25%), Query Frame = 0


Query: 57  LPTKVSPQIGEVQNVVPCLKELENLLVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKK 116
           LP     + GEV ++VP L  L   LV SKI + +    +K+KIVVT+EQ +LLL +A K
Sbjct: 57  LPPNTKLEQGEVYHLVPNLASLGKPLVPSKIVHQESCKRQKIKIVVTREQLELLLKSANK 116

Query: 117 FQCRQRL---LSYTGPRRRCKKWRPSLSVISEEQDF 150
           F+  + +   LS         KWRPSL++I E   F
Sbjct: 117 FRSPKEIGVQLSGRSGLEGSPKWRPSLAIIPEVHSF 152

The following BLAST results are available for this feature:

BLAST of Moc03g23330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877793.1	5.7e-42	72.18	uncharacterized protein LOC120070018 isoform X1 [Benincasa hispida]	[more]
KGN64995.1	3.1e-40	72.31	hypothetical protein Csa_022837 [Cucumis sativus]	[more]
KAA0042344.1	4.1e-32	72.57	hypothetical protein E6C27_scaffold795G00420 [Cucumis melo var. makuwa] >TYK1546...	[more]
KAG6583721.1	1.1e-29	73.53	hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023542404.1	2.0e-26	59.84	uncharacterized protein LOC111802317 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Moc03g23330 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc03g23330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSY9	1.5e-40	72.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173150 PE=4 SV=1	[more]
A0A5D3CW41	2.0e-32	72.57	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J5UND5	2.9e-07	40.63	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24534 PE=4 S...	[more]
A0A5E4GL56	4.9e-07	40.63	PREDICTED: POPTR_0006s01910g OS=Prunus dulcis OX=3755 GN=ALMOND_2B008489 PE=4 SV...	[more]
A0A251PDS0	4.9e-07	40.63	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G005300 PE=4 SV=1	[more]

BLAST of Moc03g23330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g23330.1	Moc03g23330.1	mRNA