Moc03g23320 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g23320
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr3: 16544811 .. 16545330 (-)
RNA-Seq Expression	Moc03g23320
Synteny	Moc03g23320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACATTCAAACAAAGGTTCTCCAACACAGAGACCAAATAACTGTTGTAGCAGCAGTTTCTGTGGTTATATCATTGTTTGTATATGCAGCCCCGCGGTTCCTAAGCATTCTAGCATTCTTTTGGCCACTCTTTGTCTCCACAGCCGTACTCTTGGTGGCAATGATTGCCTTTGGAGGCAGTTTCCCAGTTGGAATTGAAGTTCACGGTGTAAGGGCGGGTGAAGGGATTCTAGATTATGTTGCAGGACGGCCTGAATATGCTGAAAACCAATATAGGTACCAATAAGAGATCATTCGTCACAGTCGAAGTCTAGACAATGGAGACTCAAAAATTGTCTACATCTATTCACTTTGTATATTACAGCTACCAATGAATTTAGGTGTGATAAACCCAACATGTAAGTTCAATGCCAAAAATGGTCTGCAAATAGAATCAGAATGTCATTATGCATGCACTTCTTGACATATTCTGTCTGAATCCTAATGGTTAAGGATATTTCAGATCAATGATCACTTAA

mRNA sequence

ATGGACATTCAAACAAAGGTTCTCCAACACAGAGACCAAATAACTGTTGTAGCAGCAGTTTCTGTGGTTATATCATTGTTTGTATATGCAGCCCCGCGGTTCCTAAGCATTCTAGCATTCTTTTGGCCACTCTTTGTCTCCACAGCCGTACTCTTGGTGGCAATGATTGCCTTTGGAGGCAGTTTCCCAGTTGGAATTGAAGTTCACGGTGTAAGGGCGGGTGAAGGGATTCTAGATTATGTTGCAGGACGGCCTGAATATGCTGAAAACCAATATAGATCAATGATCACTTAA

Coding sequence (CDS)

ATGGACATTCAAACAAAGGTTCTCCAACACAGAGACCAAATAACTGTTGTAGCAGCAGTTTCTGTGGTTATATCATTGTTTGTATATGCAGCCCCGCGGTTCCTAAGCATTCTAGCATTCTTTTGGCCACTCTTTGTCTCCACAGCCGTACTCTTGGTGGCAATGATTGCCTTTGGAGGCAGTTTCCCAGTTGGAATTGAAGTTCACGGTGTAAGGGCGGGTGAAGGGATTCTAGATTATGTTGCAGGACGGCCTGAATATGCTGAAAACCAATATAGATCAATGATCACTTAA

Protein sequence

MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPEYAENQYRSMIT

Homology

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BLAST of Moc03g23320 vs. NCBI nr
Match: KAG7012637.1 (hypothetical protein SDJN02_25389, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 149.1 bits (375), Expect = 2.0e-32
Identity = 79/91 (86.81%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 3  IQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSF 62
          IQTKVLQH+DQ+TVVAAVSVV+SLFVYAAPRFLSILAFFWPLF+STAVLLVAM AFGG F
Sbjct: 6  IQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGF 65

Query: 63 PVGIEVHGVRAGEGILDYVAGRPEYAENQYR 94
           VG EVHG RAGE ILDYVAGRPEYAE QY+
Sbjct: 66 QVGTEVHGERAGERILDYVAGRPEYAEYQYK 96

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BLAST of Moc03g23320 vs. NCBI nr
Match: KAG6573520.1 (hypothetical protein SDJN03_27407, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 147.9 bits (372), Expect = 4.5e-32
Identity = 78/91 (85.71%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 3  IQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSF 62
          IQTKVLQH+DQ+TVVAAVSVV+SLFVYAAPRFLSILAFFWPLF+STAVLLVAM AFGG F
Sbjct: 6  IQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGF 65

Query: 63 PVGIEVHGVRAGEGILDYVAGRPEYAENQYR 94
           VG EVHG +AGE ILDYVAGRPEYAE QY+
Sbjct: 66 QVGTEVHGEKAGERILDYVAGRPEYAEYQYK 96

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BLAST of Moc03g23320 vs. NCBI nr
Match: KAA0042343.1 (hypothetical protein E6C27_scaffold795G00410 [Cucumis melo var. makuwa] >TYK15467.1 hypothetical protein E5676_scaffold477G00380 [Cucumis melo var. makuwa])

HSP 1 Score: 147.5 bits (371), Expect = 5.9e-32
Identity = 76/93 (81.72%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 1  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGG 60
          MDIQ K+LQH+DQITVVAAVSVV+SLFVY APRFLSILAFFWPLF STAVLLV M AFGG
Sbjct: 1  MDIQAKLLQHKDQITVVAAVSVVLSLFVYVAPRFLSILAFFWPLFASTAVLLVVMTAFGG 60

Query: 61 SFPVGIEVHGVRAGEGILDYVAGRPEYAENQYR 94
           F VG E+HG+RAGEGILDYVAGRPE  EN Y+
Sbjct: 61 GFQVGSEIHGMRAGEGILDYVAGRPENGENHYK 93

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BLAST of Moc03g23320 vs. NCBI nr
Match: KGN64996.1 (hypothetical protein Csa_022896 [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 7.7e-32
Identity = 76/93 (81.72%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 1  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGG 60
          MDI  KVLQH+DQ+TVVAAVSVV+SLFVYAAPRFLSILAFFWPLF STAVLLV M AFGG
Sbjct: 1  MDIHAKVLQHKDQLTVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMNAFGG 60

Query: 61 SFPVGIEVHGVRAGEGILDYVAGRPEYAENQYR 94
           F VG E+HG+RAGEGILDYVAGRPE  EN Y+
Sbjct: 61 GFQVGTEIHGMRAGEGILDYVAGRPENGENHYK 93

[Close]

BLAST of Moc03g23320 vs. NCBI nr
Match: KAG6583721.1 (hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 113.6 bits (283), Expect = 9.5e-22
Identity = 66/95 (69.47%), Postives = 74/95 (77.89%), Query Frame = 0


Query: 1   MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMI-AFG 60
           MD+QTKVLQ++DQITVVAAVSVV+SLF          LAFFWPLF STA LLV MI AF 
Sbjct: 132 MDVQTKVLQNKDQITVVAAVSVVLSLF----------LAFFWPLFASTAALLVGMIAAFR 191

Query: 61  GSFPVGIEVHGVR-AGEGILDYVAGRPEYAENQYR 94
           G F VG ++HGVR AGEGILDYVAGRPEY +N Y+
Sbjct: 192 GGFQVGTKIHGVRAAGEGILDYVAGRPEYGKNHYK 216

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BLAST of Moc03g23320 vs. ExPASy TrEMBL
Match: A0A5D3CU44 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00380 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.9e-32
Identity = 76/93 (81.72%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 1  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGG 60
          MDIQ K+LQH+DQITVVAAVSVV+SLFVY APRFLSILAFFWPLF STAVLLV M AFGG
Sbjct: 1  MDIQAKLLQHKDQITVVAAVSVVLSLFVYVAPRFLSILAFFWPLFASTAVLLVVMTAFGG 60

Query: 61 SFPVGIEVHGVRAGEGILDYVAGRPEYAENQYR 94
           F VG E+HG+RAGEGILDYVAGRPE  EN Y+
Sbjct: 61 GFQVGSEIHGMRAGEGILDYVAGRPENGENHYK 93

[Close]

BLAST of Moc03g23320 vs. ExPASy TrEMBL
Match: A0A0A0LYI8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173160 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.7e-32
Identity = 76/93 (81.72%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 1  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGG 60
          MDI  KVLQH+DQ+TVVAAVSVV+SLFVYAAPRFLSILAFFWPLF STAVLLV M AFGG
Sbjct: 1  MDIHAKVLQHKDQLTVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMNAFGG 60

Query: 61 SFPVGIEVHGVRAGEGILDYVAGRPEYAENQYR 94
           F VG E+HG+RAGEGILDYVAGRPE  EN Y+
Sbjct: 61 GFQVGTEIHGMRAGEGILDYVAGRPENGENHYK 93

[Close]

BLAST of Moc03g23320 vs. ExPASy TrEMBL
Match: A0A2N9EZM9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8190 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.8e-18
Identity = 51/87 (58.62%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 1  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGG 60
          MDI  K+LQ+R  +T+ A V +V+SL +YAAPR ++ILAFFWPLF STAVLL+A++AFGG
Sbjct: 1  MDIPEKLLQYRYHLTIAAIVPLVLSLLLYAAPRLVNILAFFWPLFASTAVLLMAILAFGG 60

Query: 61 SFPVGIEVHGVRAGEGILDYVAGRPEY 88
                E HG +AG+GIL+YV G+PE+
Sbjct: 61 LSQFSTEAHGAKAGQGILEYVGGQPEH 87

[Close]

BLAST of Moc03g23320 vs. ExPASy TrEMBL
Match: A0A061GGG1 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_030419 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.8e-18
Identity = 49/89 (55.06%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 1   MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGG 60
           MDIQ K++Q+R   T+    S +I+  +Y APR L+IL +FWPLF ST V LVA+IAFGG
Sbjct: 90  MDIQQKLVQYRYHFTIAILASFIIAFLLYVAPRLLTILTYFWPLFASTTVFLVAIIAFGG 149

Query: 61  SFPVGIEVHGVRAGEGILDYVAGRPEYAE 90
              +  EVHG +AG+G++DYVA RPE+AE
Sbjct: 150 GSQLATEVHGEKAGQGLMDYVAARPEHAE 178

[Close]

BLAST of Moc03g23320 vs. ExPASy TrEMBL
Match: D7T5G5 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0194g00220 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.8e-18
Identity = 49/86 (56.98%), Postives = 65/86 (75.58%), Query Frame = 0


Query: 1  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGG 60
          M+IQTK++Q++    +   VS++++L    APRFL+ILA+FWPLFVSTAVLL+ MI FG 
Sbjct: 1  MEIQTKLMQYQYHFIITVVVSIILALLFQVAPRFLTILAYFWPLFVSTAVLLMVMIVFGQ 60

Query: 61 SFPVGIEVHGVRAGEGILDYVAGRPE 87
            P   E+HG + GEG+LDYVAGRPE
Sbjct: 61 LSPPSTEIHGEKTGEGLLDYVAGRPE 86

[Close]

BLAST of Moc03g23320 vs. TAIR 10
Match: AT4G16400.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13175.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 76.6 bits (187), Expect = 1.2e-14
Identity = 43/86 (50.00%), Postives = 56/86 (65.12%), Query Frame = 0


Query: 1   MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGG 60
           M+IQ K++++R    V   VSV+++  VYAAPR L+ILA+FWPLF STA  L   I FGG
Sbjct: 122 MEIQAKLMEYRFHFMVTIMVSVIVASLVYAAPRILNILAYFWPLFASTAAFLAMAITFGG 181

Query: 61  SFPVGIEVHGVRAGEGILDYVAGRPE 87
              +  E      GE ++DYVAGRPE
Sbjct: 182 FQQLSEEA----TGERLMDYVAGRPE 203

[Close]

BLAST of Moc03g23320 vs. TAIR 10
Match: AT3G13175.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16400.1); Has 29 Blast hits to 29 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 3.5e-06
Identity = 35/91 (38.46%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 1  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFG- 60
          M+ + K+L+ + QI     +S++    V  +P FL++L++FWPLF+STA+ L A+  F  
Sbjct: 1  MEFREKLLKFKLQIVFAFVLSLLTVALVAYSPGFLTVLSYFWPLFLSTALFLAAVFFFAR 60

Query: 61 -GSFPVGI-----EVHGVR-AGEGILDYVAG 84
              PV       E  G++ A EGILDYV G
Sbjct: 61 TSDLPVSSTIIPGEGAGLKVAAEGILDYVVG 91

The following BLAST results are available for this feature:

BLAST of Moc03g23320 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7012637.1	2.0e-32	86.81	hypothetical protein SDJN02_25389, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6573520.1	4.5e-32	85.71	hypothetical protein SDJN03_27407, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0042343.1	5.9e-32	81.72	hypothetical protein E6C27_scaffold795G00410 [Cucumis melo var. makuwa] >TYK1546...	[more]
KGN64996.1	7.7e-32	81.72	hypothetical protein Csa_022896 [Cucumis sativus]	[more]
KAG6583721.1	9.5e-22	69.47	hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Moc03g23320 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc03g23320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CU44	2.9e-32	81.72	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LYI8	3.7e-32	81.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173160 PE=4 SV=1	[more]
A0A2N9EZM9	1.8e-18	58.62	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8190 PE=4 SV=1	[more]
A0A061GGG1	6.8e-18	55.06	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_030419 PE=4 SV=1	[more]
D7T5G5	6.8e-18	56.98	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0194g00220 PE=4 SV=...	[more]

BLAST of Moc03g23320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16400.1	1.2e-14	50.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G13175.1	3.5e-06	38.46	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34125	OS01G0762900 PROTEIN	coord: 1..91
None	No IPR available	PANTHER	PTHR34125:SF7	TRANSMEMBRANE PROTEIN	coord: 1..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g23320.1	Moc03g23320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane