Homology
BLAST of Moc03g20850 vs. NCBI nr
Match:
KAA0048297.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 236.9 bits (603), Expect = 1.9e-58
Identity = 131/251 (52.19%), Postives = 166/251 (66.14%), Query Frame = 0
Query: 2 MSNLAISNETPSGQQIHAANGAGLSITHTEQSSFISPS--NHVFHLKNLLHVPSVTKNLL 61
+SNL+I +E G QI+AANG+GL ITH SF S + F L NLL VPS+TKNL+
Sbjct: 362 LSNLSIGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLI 421
Query: 62 TVSQFAHDNNIYFEFHPSFCLVKDQATGNILLKGLLQDGLYSFKLNASTSSSQSQSSVYH 121
+VSQFA DN+++FEFHP+ C VKD TG +LL+GLL DGLY F + S H
Sbjct: 422 SVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKR-------LH 481
Query: 122 VSNPSSSSSTTNSSLHCKSN---LDIWHNRLGHPSTLVITQVLKQYTISSQFNKNLSFCQ 181
SN S++ +++ KSN LD+WH RLGHP ++ VL SS L+FC+
Sbjct: 482 HSN--SNTKPVFNTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNSSGTINKLNFCE 541
Query: 182 ACAIEKNHSLPFPTSSTTYTIPLQLIVSDLWGPSYKTSRNGYKYYISFIDAYSRFTWIYF 241
ACA+ K+H+LPF S T YT PLQLI DLWGP+ S NG++YYISF+DAYSR+TWIYF
Sbjct: 542 ACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTWIYF 601
Query: 242 LESKARAFSAF 248
L SK+ AF AF
Sbjct: 602 LNSKSDAFLAF 603
BLAST of Moc03g20850 vs. NCBI nr
Match:
TYK10642.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 236.9 bits (603), Expect = 1.9e-58
Identity = 131/251 (52.19%), Postives = 166/251 (66.14%), Query Frame = 0
Query: 2 MSNLAISNETPSGQQIHAANGAGLSITHTEQSSFISPS--NHVFHLKNLLHVPSVTKNLL 61
+SNL+I +E G QI+AANG+GL ITH SF S + F L NLL VPS+TKNL+
Sbjct: 362 LSNLSIGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLI 421
Query: 62 TVSQFAHDNNIYFEFHPSFCLVKDQATGNILLKGLLQDGLYSFKLNASTSSSQSQSSVYH 121
+VSQFA DN+++FEFHP+ C VKD TG +LL+GLL DGLY F + S H
Sbjct: 422 SVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKR-------LH 481
Query: 122 VSNPSSSSSTTNSSLHCKSN---LDIWHNRLGHPSTLVITQVLKQYTISSQFNKNLSFCQ 181
SN S++ +++ KSN LD+WH RLGHP ++ VL SS L+FC+
Sbjct: 482 HSN--SNTKPVFNTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNSSGTINKLNFCE 541
Query: 182 ACAIEKNHSLPFPTSSTTYTIPLQLIVSDLWGPSYKTSRNGYKYYISFIDAYSRFTWIYF 241
ACA+ K+H+LPF S T YT PLQLI DLWGP+ S NG++YYISF+DAYSR+TWIYF
Sbjct: 542 ACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTWIYF 601
Query: 242 LESKARAFSAF 248
L SK+ AF AF
Sbjct: 602 LNSKSDAFLAF 603
BLAST of Moc03g20850 vs. NCBI nr
Match:
KZV26181.1 (hypothetical protein F511_06348 [Dorcoceras hygrometricum])
HSP 1 Score: 231.5 bits (589), Expect = 8.0e-57
Identity = 122/253 (48.22%), Postives = 167/253 (66.01%), Query Frame = 0
Query: 2 MSNLAISNETPSGQQIHAANGAGLSITHTEQSSF-ISPSNHVFHLKNLLHVPSVTKNLLT 61
+ NL++S+E G ++ NGAGLSI++ +S+ + PS+ F LKNLLHVP +TKNL++
Sbjct: 286 LGNLSVSSEYTGGSKVQVGNGAGLSISNIGESNLNMFPSSRPFLLKNLLHVPLITKNLIS 345
Query: 62 VSQFAHDNNIYFEFHPSFCLVKDQATGNILLKGLLQDGLYSFKLNASTSS-----SQSQS 121
VS+FA+DN++YFEFHPSFCLVKD AT +LL+G L +GLY F L + S + QS
Sbjct: 346 VSKFAYDNHVYFEFHPSFCLVKDPATHVVLLRGTLHNGLYRFNLKSRISGPLHSPACLQS 405
Query: 122 SVYHVSNPSSSSSTTNSSLHCKSNLDIWHNRLGHPSTLVITQVLKQYTISSQFNKNLSFC 181
SV + P S ++ LD WH RLGHPS + QVL N N+SFC
Sbjct: 406 SVSPIKVPDQSPLCLP-----QNTLDKWHLRLGHPSIATVKQVLLDCNERISKNDNISFC 465
Query: 182 QACAIEKNHSLPFPTSSTTYTIPLQLIVSDLWGPSYKTSRNGYKYYISFIDAYSRFTWIY 241
+C + KNH LPFP S+T ++ P +++ SDLWGP++ SRNG +YYISF+DAY+R+TWIY
Sbjct: 466 SSCQLGKNHLLPFPQSTTNFSAPFEVVYSDLWGPAHIPSRNGSRYYISFVDAYTRYTWIY 525
Query: 242 FLESKARAFSAFI 249
FL+ K+ FI
Sbjct: 526 FLKLKSEVTQTFI 533
BLAST of Moc03g20850 vs. NCBI nr
Match:
RVW60229.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 220.7 bits (561), Expect = 1.4e-53
Identity = 122/263 (46.39%), Postives = 162/263 (61.60%), Query Frame = 0
Query: 2 MSNLAISNETPSGQQIHAANGAGLSITHTEQSSFISPS--NHVFHLKNLLHVPSVTKNLL 61
+ NL E +IH NG GL I+H S F S S N V LKN+L VP++ KNLL
Sbjct: 508 LGNLNSGAEYNGNSKIHMGNGTGLKISHIGLSVFPSSSSPNKVLFLKNILRVPAIKKNLL 567
Query: 62 TVSQFAHDNNIYFEFHPSFCLVKDQATGNILLKGLLQDGLYSFKLN---------ASTSS 121
+VSQFA DNN+YFEFHP C VKD++ ++LL+G L GLY F L+ S S+
Sbjct: 568 SVSQFARDNNVYFEFHPKVCFVKDKSNHSLLLQGNLHKGLYQFNLSKKLFGKASGLSLSN 627
Query: 122 SQSQ-----SSVYHVSNPSSSSSTTNSSLHCKSNLDIWHNRLGHPSTLVITQVLKQYTIS 181
+++ +S+ H N S TNSS H D+WH RLGHP++ ++TQVL I
Sbjct: 628 DKNELTCCNASLVHNDN-SDFPEKTNSSFHV---FDLWHKRLGHPASKIVTQVLNDNKIP 687
Query: 182 SQFNKNLSFCQACAIEKNHSLPFPTSSTTYTIPLQLIVSDLWGPSYKTSRNGYKYYISFI 241
S C AC + K+H+LPFP S T YT PLQL+VSDLWGP+ S G+ YY+SF+
Sbjct: 688 FSTKSGSSICSACQLGKSHNLPFPISQTVYTKPLQLVVSDLWGPAPINSSYGFTYYVSFV 747
Query: 242 DAYSRFTWIYFLESKARAFSAFI 249
DAYSR+TW+YFL++K++ AF+
Sbjct: 748 DAYSRYTWVYFLKTKSQTREAFL 766
BLAST of Moc03g20850 vs. NCBI nr
Match:
RVW44519.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 220.7 bits (561), Expect = 1.4e-53
Identity = 122/263 (46.39%), Postives = 162/263 (61.60%), Query Frame = 0
Query: 2 MSNLAISNETPSGQQIHAANGAGLSITHTEQSSFISPS--NHVFHLKNLLHVPSVTKNLL 61
+ NL E +IH NG GL I+H S F S S N V LKN+L VP++ KNLL
Sbjct: 372 LGNLNSGAEYNGNSKIHMGNGTGLKISHIGLSVFPSSSSPNKVLFLKNILRVPAIKKNLL 431
Query: 62 TVSQFAHDNNIYFEFHPSFCLVKDQATGNILLKGLLQDGLYSFKLN---------ASTSS 121
+VSQFA DNN+YFEFHP C VKD++ ++LL+G L GLY F L+ S S+
Sbjct: 432 SVSQFARDNNVYFEFHPKVCFVKDKSNHSLLLQGNLHKGLYQFNLSKKLFGKASGLSLSN 491
Query: 122 SQSQ-----SSVYHVSNPSSSSSTTNSSLHCKSNLDIWHNRLGHPSTLVITQVLKQYTIS 181
+++ +S+ H N S TNSS H D+WH RLGHP++ ++TQVL I
Sbjct: 492 DKNELTCCNASLVHNDN-SDFPEKTNSSFHV---FDLWHKRLGHPASKIVTQVLNDNKIP 551
Query: 182 SQFNKNLSFCQACAIEKNHSLPFPTSSTTYTIPLQLIVSDLWGPSYKTSRNGYKYYISFI 241
S C AC + K+H+LPFP S T YT PLQL+VSDLWGP+ S G+ YY+SF+
Sbjct: 552 FSTKSGSSICSACQLGKSHNLPFPISQTVYTKPLQLVVSDLWGPAPINSSYGFTYYVSFV 611
Query: 242 DAYSRFTWIYFLESKARAFSAFI 249
DAYSR+TW+YFL++K++ AF+
Sbjct: 612 DAYSRYTWVYFLKTKSQTREAFL 630
BLAST of Moc03g20850 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 129.4 bits (324), Expect = 5.6e-29
Identity = 86/248 (34.68%), Postives = 139/248 (56.05%), Query Frame = 0
Query: 3 SNLAISNETPSGQQIHAANGAGLSITHTEQSSFISPSNHVFHLKNLLHVPSVTKNLLTVS 62
+NL++ G + A+G+ + I+HT +S +S + +L N+L+VP++ KNL++V
Sbjct: 346 NNLSLHQPYTGGDDVMVADGSTIPISHTGSTS-LSTKSRPLNLHNILYVPNIHKNLISVY 405
Query: 63 QFAHDNNIYFEFHPSFCLVKDQATGNILLKGLLQDGLYSFKLNASTSSSQSQSSVYHVSN 122
+ + N + EF P+ VKD TG LL+G +D LY + + +SSQ S
Sbjct: 406 RLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPI----ASSQPVSLF----- 465
Query: 123 PSSSSSTTNSSLHCKSNLDIWHNRLGHPSTLVITQVLKQYTIS--SQFNKNLSFCQACAI 182
S SS T+SS WH RLGHP+ ++ V+ Y++S + +K LS C C I
Sbjct: 466 ASPSSKATHSS---------WHARLGHPAPSILNSVISNYSLSVLNPSHKFLS-CSDCLI 525
Query: 183 EKNHSLPFPTSSTTYTIPLQLIVSDLWGPSYKTSRNGYKYYISFIDAYSRFTWIYFLESK 242
K++ +PF S+ T PL+ I SD+W S S + Y+YY+ F+D ++R+TW+Y L+ K
Sbjct: 526 NKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQK 572
Query: 243 ARAFSAFI 249
++ FI
Sbjct: 586 SQVKETFI 572
BLAST of Moc03g20850 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 126.7 bits (317), Expect = 3.6e-28
Identity = 85/248 (34.27%), Postives = 137/248 (55.24%), Query Frame = 0
Query: 3 SNLAISNETPSGQQIHAANGAGLSITHTEQSSFISPSNHVFHLKNLLHVPSVTKNLLTVS 62
+NL+ G + A+G+ + ITHT +S + S+ L +L+VP++ KNL++V
Sbjct: 325 NNLSFHQPYTGGDDVMIADGSTIPITHTGSAS-LPTSSRSLDLNKVLYVPNIHKNLISVY 384
Query: 63 QFAHDNNIYFEFHPSFCLVKDQATGNILLKGLLQDGLYSFKLNASTSSSQSQSSVYHVSN 122
+ + N + EF P+ VKD TG LL+G +D LY + + +SSQ+ S
Sbjct: 385 RLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPI----ASSQAVSMF----- 444
Query: 123 PSSSSSTTNSSLHCKSNLDIWHNRLGHPSTLVITQVLKQYT--ISSQFNKNLSFCQACAI 182
S S T+SS WH+RLGHPS ++ V+ ++ + + +K LS C C I
Sbjct: 445 ASPCSKATHSS---------WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFI 504
Query: 183 EKNHSLPFPTSSTTYTIPLQLIVSDLWGPSYKTSRNGYKYYISFIDAYSRFTWIYFLESK 242
K+H +PF S+ T + PL+ I SD+W S S + Y+YY+ F+D ++R+TW+Y L+ K
Sbjct: 505 NKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQK 551
Query: 243 ARAFSAFI 249
++ FI
Sbjct: 565 SQVKDTFI 551
BLAST of Moc03g20850 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 74.7 bits (182), Expect = 1.6e-12
Identity = 39/109 (35.78%), Postives = 57/109 (52.29%), Query Frame = 0
Query: 139 NLDIWHNRLGHPSTLVITQVLKQYTISSQFNKNLSFCQACAIEKNHSLPFPTSSTTYTIP 198
++D+WH R+GH S + + K+ IS + C C K H + F TSS
Sbjct: 421 SVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNI 480
Query: 199 LQLIVSDLWGPSYKTSRNGYKYYISFIDAYSRFTWIYFLESKARAFSAF 248
L L+ SD+ GP S G KY+++FID SR W+Y L++K + F F
Sbjct: 481 LDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVF 529
BLAST of Moc03g20850 vs. ExPASy Swiss-Prot
Match:
P93293 (Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana OX=3702 GN=AtMg00300 PE=4 SV=1)
HSP 1 Score: 48.5 bits (114), Expect = 1.3e-04
Identity = 27/90 (30.00%), Postives = 43/90 (47.78%), Query Frame = 0
Query: 119 HVSNPSSSSSTTNSSLHCKSNLDIWHNRLGHPSTLVITQVLKQYTISSQFNKNLSFCQAC 178
++ S + +N + K +WH+RL H S + ++K+ + S +L FC+ C
Sbjct: 48 YILQGSVETGESNLAETAKDETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDC 107
Query: 179 AIEKNHSLPFPTSSTTYTIPLQLIVSDLWG 209
K H + F T T PL + SDLWG
Sbjct: 108 IYGKTHRVNFSTGQHTTKNPLDYVHSDLWG 137
BLAST of Moc03g20850 vs. ExPASy TrEMBL
Match:
A0A5A7U233 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00060 PE=4 SV=1)
HSP 1 Score: 236.9 bits (603), Expect = 9.2e-59
Identity = 131/251 (52.19%), Postives = 166/251 (66.14%), Query Frame = 0
Query: 2 MSNLAISNETPSGQQIHAANGAGLSITHTEQSSFISPS--NHVFHLKNLLHVPSVTKNLL 61
+SNL+I +E G QI+AANG+GL ITH SF S + F L NLL VPS+TKNL+
Sbjct: 362 LSNLSIGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLI 421
Query: 62 TVSQFAHDNNIYFEFHPSFCLVKDQATGNILLKGLLQDGLYSFKLNASTSSSQSQSSVYH 121
+VSQFA DN+++FEFHP+ C VKD TG +LL+GLL DGLY F + S H
Sbjct: 422 SVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKR-------LH 481
Query: 122 VSNPSSSSSTTNSSLHCKSN---LDIWHNRLGHPSTLVITQVLKQYTISSQFNKNLSFCQ 181
SN S++ +++ KSN LD+WH RLGHP ++ VL SS L+FC+
Sbjct: 482 HSN--SNTKPVFNTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNSSGTINKLNFCE 541
Query: 182 ACAIEKNHSLPFPTSSTTYTIPLQLIVSDLWGPSYKTSRNGYKYYISFIDAYSRFTWIYF 241
ACA+ K+H+LPF S T YT PLQLI DLWGP+ S NG++YYISF+DAYSR+TWIYF
Sbjct: 542 ACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTWIYF 601
Query: 242 LESKARAFSAF 248
L SK+ AF AF
Sbjct: 602 LNSKSDAFLAF 603
BLAST of Moc03g20850 vs. ExPASy TrEMBL
Match:
A0A5D3CH97 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00040 PE=4 SV=1)
HSP 1 Score: 236.9 bits (603), Expect = 9.2e-59
Identity = 131/251 (52.19%), Postives = 166/251 (66.14%), Query Frame = 0
Query: 2 MSNLAISNETPSGQQIHAANGAGLSITHTEQSSFISPS--NHVFHLKNLLHVPSVTKNLL 61
+SNL+I +E G QI+AANG+GL ITH SF S + F L NLL VPS+TKNL+
Sbjct: 362 LSNLSIGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLI 421
Query: 62 TVSQFAHDNNIYFEFHPSFCLVKDQATGNILLKGLLQDGLYSFKLNASTSSSQSQSSVYH 121
+VSQFA DN+++FEFHP+ C VKD TG +LL+GLL DGLY F + S H
Sbjct: 422 SVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKR-------LH 481
Query: 122 VSNPSSSSSTTNSSLHCKSN---LDIWHNRLGHPSTLVITQVLKQYTISSQFNKNLSFCQ 181
SN S++ +++ KSN LD+WH RLGHP ++ VL SS L+FC+
Sbjct: 482 HSN--SNTKPVFNTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNSSGTINKLNFCE 541
Query: 182 ACAIEKNHSLPFPTSSTTYTIPLQLIVSDLWGPSYKTSRNGYKYYISFIDAYSRFTWIYF 241
ACA+ K+H+LPF S T YT PLQLI DLWGP+ S NG++YYISF+DAYSR+TWIYF
Sbjct: 542 ACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTWIYF 601
Query: 242 LESKARAFSAF 248
L SK+ AF AF
Sbjct: 602 LNSKSDAFLAF 603
BLAST of Moc03g20850 vs. ExPASy TrEMBL
Match:
A0A2Z7AWA7 (Integrase catalytic domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_06348 PE=4 SV=1)
HSP 1 Score: 231.5 bits (589), Expect = 3.8e-57
Identity = 122/253 (48.22%), Postives = 167/253 (66.01%), Query Frame = 0
Query: 2 MSNLAISNETPSGQQIHAANGAGLSITHTEQSSF-ISPSNHVFHLKNLLHVPSVTKNLLT 61
+ NL++S+E G ++ NGAGLSI++ +S+ + PS+ F LKNLLHVP +TKNL++
Sbjct: 286 LGNLSVSSEYTGGSKVQVGNGAGLSISNIGESNLNMFPSSRPFLLKNLLHVPLITKNLIS 345
Query: 62 VSQFAHDNNIYFEFHPSFCLVKDQATGNILLKGLLQDGLYSFKLNASTSS-----SQSQS 121
VS+FA+DN++YFEFHPSFCLVKD AT +LL+G L +GLY F L + S + QS
Sbjct: 346 VSKFAYDNHVYFEFHPSFCLVKDPATHVVLLRGTLHNGLYRFNLKSRISGPLHSPACLQS 405
Query: 122 SVYHVSNPSSSSSTTNSSLHCKSNLDIWHNRLGHPSTLVITQVLKQYTISSQFNKNLSFC 181
SV + P S ++ LD WH RLGHPS + QVL N N+SFC
Sbjct: 406 SVSPIKVPDQSPLCLP-----QNTLDKWHLRLGHPSIATVKQVLLDCNERISKNDNISFC 465
Query: 182 QACAIEKNHSLPFPTSSTTYTIPLQLIVSDLWGPSYKTSRNGYKYYISFIDAYSRFTWIY 241
+C + KNH LPFP S+T ++ P +++ SDLWGP++ SRNG +YYISF+DAY+R+TWIY
Sbjct: 466 SSCQLGKNHLLPFPQSTTNFSAPFEVVYSDLWGPAHIPSRNGSRYYISFVDAYTRYTWIY 525
Query: 242 FLESKARAFSAFI 249
FL+ K+ FI
Sbjct: 526 FLKLKSEVTQTFI 533
BLAST of Moc03g20850 vs. ExPASy TrEMBL
Match:
A0A438FJP6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1134 PE=4 SV=1)
HSP 1 Score: 220.7 bits (561), Expect = 6.8e-54
Identity = 122/263 (46.39%), Postives = 162/263 (61.60%), Query Frame = 0
Query: 2 MSNLAISNETPSGQQIHAANGAGLSITHTEQSSFISPS--NHVFHLKNLLHVPSVTKNLL 61
+ NL E +IH NG GL I+H S F S S N V LKN+L VP++ KNLL
Sbjct: 508 LGNLNSGAEYNGNSKIHMGNGTGLKISHIGLSVFPSSSSPNKVLFLKNILRVPAIKKNLL 567
Query: 62 TVSQFAHDNNIYFEFHPSFCLVKDQATGNILLKGLLQDGLYSFKLN---------ASTSS 121
+VSQFA DNN+YFEFHP C VKD++ ++LL+G L GLY F L+ S S+
Sbjct: 568 SVSQFARDNNVYFEFHPKVCFVKDKSNHSLLLQGNLHKGLYQFNLSKKLFGKASGLSLSN 627
Query: 122 SQSQ-----SSVYHVSNPSSSSSTTNSSLHCKSNLDIWHNRLGHPSTLVITQVLKQYTIS 181
+++ +S+ H N S TNSS H D+WH RLGHP++ ++TQVL I
Sbjct: 628 DKNELTCCNASLVHNDN-SDFPEKTNSSFHV---FDLWHKRLGHPASKIVTQVLNDNKIP 687
Query: 182 SQFNKNLSFCQACAIEKNHSLPFPTSSTTYTIPLQLIVSDLWGPSYKTSRNGYKYYISFI 241
S C AC + K+H+LPFP S T YT PLQL+VSDLWGP+ S G+ YY+SF+
Sbjct: 688 FSTKSGSSICSACQLGKSHNLPFPISQTVYTKPLQLVVSDLWGPAPINSSYGFTYYVSFV 747
Query: 242 DAYSRFTWIYFLESKARAFSAFI 249
DAYSR+TW+YFL++K++ AF+
Sbjct: 748 DAYSRYTWVYFLKTKSQTREAFL 766
BLAST of Moc03g20850 vs. ExPASy TrEMBL
Match:
A0A438EA49 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2917 PE=4 SV=1)
HSP 1 Score: 220.7 bits (561), Expect = 6.8e-54
Identity = 122/263 (46.39%), Postives = 162/263 (61.60%), Query Frame = 0
Query: 2 MSNLAISNETPSGQQIHAANGAGLSITHTEQSSFISPS--NHVFHLKNLLHVPSVTKNLL 61
+ NL E +IH NG GL I+H S F S S N V LKN+L VP++ KNLL
Sbjct: 372 LGNLNSGAEYNGNSKIHMGNGTGLKISHIGLSVFPSSSSPNKVLFLKNILRVPAIKKNLL 431
Query: 62 TVSQFAHDNNIYFEFHPSFCLVKDQATGNILLKGLLQDGLYSFKLN---------ASTSS 121
+VSQFA DNN+YFEFHP C VKD++ ++LL+G L GLY F L+ S S+
Sbjct: 432 SVSQFARDNNVYFEFHPKVCFVKDKSNHSLLLQGNLHKGLYQFNLSKKLFGKASGLSLSN 491
Query: 122 SQSQ-----SSVYHVSNPSSSSSTTNSSLHCKSNLDIWHNRLGHPSTLVITQVLKQYTIS 181
+++ +S+ H N S TNSS H D+WH RLGHP++ ++TQVL I
Sbjct: 492 DKNELTCCNASLVHNDN-SDFPEKTNSSFHV---FDLWHKRLGHPASKIVTQVLNDNKIP 551
Query: 182 SQFNKNLSFCQACAIEKNHSLPFPTSSTTYTIPLQLIVSDLWGPSYKTSRNGYKYYISFI 241
S C AC + K+H+LPFP S T YT PLQL+VSDLWGP+ S G+ YY+SF+
Sbjct: 552 FSTKSGSSICSACQLGKSHNLPFPISQTVYTKPLQLVVSDLWGPAPINSSYGFTYYVSFV 611
Query: 242 DAYSRFTWIYFLESKARAFSAFI 249
DAYSR+TW+YFL++K++ AF+
Sbjct: 612 DAYSRYTWVYFLKTKSQTREAFL 630
BLAST of Moc03g20850 vs. TAIR 10
Match:
ATMG00300.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 48.5 bits (114), Expect = 8.9e-06
Identity = 27/90 (30.00%), Postives = 43/90 (47.78%), Query Frame = 0
Query: 119 HVSNPSSSSSTTNSSLHCKSNLDIWHNRLGHPSTLVITQVLKQYTISSQFNKNLSFCQAC 178
++ S + +N + K +WH+RL H S + ++K+ + S +L FC+ C
Sbjct: 48 YILQGSVETGESNLAETAKDETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDC 107
Query: 179 AIEKNHSLPFPTSSTTYTIPLQLIVSDLWG 209
K H + F T T PL + SDLWG
Sbjct: 108 IYGKTHRVNFSTGQHTTKNPLDYVHSDLWG 137
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0048297.1 | 1.9e-58 | 52.19 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
TYK10642.1 | 1.9e-58 | 52.19 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
KZV26181.1 | 8.0e-57 | 48.22 | hypothetical protein F511_06348 [Dorcoceras hygrometricum] | [more] |
RVW60229.1 | 1.4e-53 | 46.39 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
RVW44519.1 | 1.4e-53 | 46.39 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
Q94HW2 | 5.6e-29 | 34.68 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 3.6e-28 | 34.27 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P10978 | 1.6e-12 | 35.78 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P93293 | 1.3e-04 | 30.00 | Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7U233 | 9.2e-59 | 52.19 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5D3CH97 | 9.2e-59 | 52.19 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A2Z7AWA7 | 3.8e-57 | 48.22 | Integrase catalytic domain-containing protein OS=Dorcoceras hygrometricum OX=472... | [more] |
A0A438FJP6 | 6.8e-54 | 46.39 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
A0A438EA49 | 6.8e-54 | 46.39 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
Match Name | E-value | Identity | Description | |
ATMG00300.1 | 8.9e-06 | 30.00 | Gag-Pol-related retrotransposon family protein | [more] |