Moc03g02710 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc03g02710
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr3: 2049020 .. 2051619 (+)
RNA-Seq ExpressionMoc03g02710
SyntenyMoc03g02710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGACGATCGGGGAGGTCAGCTGACAAAACTTAGAGCGATTCTCGGGGTACCTGTAAGGAGGTTAGCCACTCCAACGTCCAAGTTAGTAAATAATTCGAGCTCAACAGATGAGCGTCAGACAAATTATTTTTAATACCTAGGCATCGAAAGGGGTGGTTTATTTATAGTGGTCAATGGGGTAGATAGTTGTCCTATCAGGGTATAGTCCTACTCGAGTTGGATTCCCCTGAGCAACCTTCAGTCCTAGCCATGGACCGGTCCGTGTTTCTCACACCAAGTTGCCGCAACCGACCTGACAATTCTATTGTTAGTGGAAACTGTCAACAAGTCAGACATCCACAATTTGACCCCAAAAATTGACCCCCTTTTAGGTCGACTGACAGGTCATTTACCTGCGAGGTTGTTAATGCGGACGACTTGCGTTTAGATCTTGTTTCCGAGTTGATATGGATGATGTGGACCAATCAGTCTCCCTGACAAGGGCCTTTAATAGCCACTAGGGGGTTTCATATCGGACGCGACCTTTGAGGTGCTCTTGGGCACTTAACCGTCGTTTTATGGGAGACGATCTGGGCTGCCTGCGAGAAGACACGTGTAGGGTGGAGATCATTCCCCACCTCGTATATATAAGCTTGAGGGCTTCCCCCTCACTTTGCGCTTTCAAGACTCCCCTTTACTCTCATGCCGAGGTCAGTAGCTCGTCTTTCTCTACTTCCTTTTGCAAGTAGGTCGTAGGAGATGTCTGATAGGGATAATAGCTCTAGGTCGGGGCCTGGGAGCTTGCAGGAGAGCTTCAAGAAACCTTTGGAGGGGTCCCCCATTGGCGTTCTCGAGTGTCAGGTTGGCCTTCGACGAGTCGTCATCCACCGAGTCTTCCAATAACAGGTCTTCTTTCCCTACGGGCAGGGATGAGCTGCCTCCTTGCCTATCCATTCAGCTTTACGTCCCCCCTCCAAAATCTCAGAAAAACGCATCGCAGCTGTCCGACCTAGGCAACGGCTGCCTGGCCTATTTTACGGACATGTATGACATTCCTACATCGATAGGGATGATGTTTCTCAAGCTAGGAGAGACCGTAGAGAATCCTCCTGAGGGGCATGTTGCCTTTTACGAGAAAATGTTCGAGTTAAGGGTTAGGCTCCCCCTTCACCCTTCCGCACAGCTCGCGTCCAATGGCTGGGGCATCCTTCTCGGCTGTTGGATGTTATGTTGGGGCTTGGGGTAGATACCATAGGTGCAAATTACCTCACCCTGAGCCAGTTTCACTCATTTTACACTGTCAATAACCTTTCAAGGGAACCAGGTCGGTTTTACCTCACAGCTCGACAGGGCGTCGGGAAACTAGTCTGTGGACCGTCCTCTATTAAGCATTGGAAAGACGATTAGTTCTATGTGTACGGCGACTGGTTGGCTAGGGTCGTAAGGGCGAGCTGAGATGGCGGGTTCTTCGCCACTTCAGCAATCGAGGTAACGCCCCTCTTCCTTAGTCGCCATGTGTTTTCAAGCCTTGCCAACCTTCTCACTTTTCTTTTTTGTTTGTAGTTCACCCCAAGTTTATTCCCTGACCTGACGAGCTCACCTGCAAATACTTGGTGAGGATTCCTAAAATTTACCGAGCAGATCAACACTACCTCACTCTTATGGCCGACGACAATTTGTACGACTGTAGCCTGCACATCTTCGAGTGGGCTGCATATGAGAGGAGATCGCACTAGGCGAGGCTGCATCTAACCCATGCACGCCAGCCCCTCTAGATCTCTCTCTCTTCTTTTATCTCTCATATCCGAAGGTACGTCATCTTTTATTCTCACTTTGCCAACTATCACTTTCACCAGTGAATTTGACCATATGGTGTCGTTGCAGACATGCTGCCTGAGTTCCTCATTGGCCGGAAACGGAGGGTACCTAGCTTGGTAGCTACACATCGCTTATCGAGGTCCCTAACGGATAGGCCTCTGTTGGATCCGTCCCTTCCGCTCCCCATTCGGACCCGATCGAGGTGGCTCCACTCCAGATAGTTCACAATGCCTCCTAAGAAAAAGAAGAAGAAGAAGAAGACTCATTAGGGGTCTAGCCCGAGTTCATGGGCTATTGAGAGGGCTGAGAAGGTTGGCCCCTCTGTAGTGGCCGACTCAAGGGGGTCGCACATCGCTAGGAATATAGGCAAAGTAAGGGACTGCGACCTCCATTTCAGGAGCTACCCCACTTCTAGCAGCATCGATGCCCTATCGTGAAGAATCAAACCTGGCGAGCTTGAACCGAGCTCTGGGGAGCATCAACTCACCTACTGGGACAGCTAGGGAGACCATTTAGCTGGCCATCGACCACGCTGTCGAGGTACCCTTCTAGAGCTCTTCATTTATACTTAGTACTTCAATCGTTTAGTTATTTTTTCTTACTTTTGTTCTTTCAGGTGCATGCCCTCATATGTAGCTTAGTGACCTTCATGGTGCGGAGCTCCTTGGACGAGAGCAGTGGGCGAATAAGGAGACCGCTGGTCATGCCAAGACAGTTGAGGAGGCCAATCTTACCAAGGCATCTGCATTAGTGTTTTTCGCATGCGGTACTCGTTCTATGGTGTACCTAAGGAATTGA

mRNA sequence

ATGGATGACGATCGGGGAGGTCAGCTGACAAAACTTAGAGCGATTCTCGGGGTACCTGGTATAGTCCTACTCGAGTTGGATTCCCCTGAGCAACCTTCAGTCCTAGCCATGGACCGGTCCGTGTTTCTCACACCAAGTTGCCGCAACCGACCTGACAATTCTATTGTTAGTCGTAGGAGATGTCTGATAGGGATAATAGCTCTAGGTCGGGGCCTGGGAGCTTGCAGGAGAGCTTCAAGAAACCTTTGGAGGGGTCCCCCATTGGCGTTCTCGAGTGTCAGGTTGGCCTTCGACGAGTCGTCATCCACCGAGTCTTCCAATAACAGGTCTTCTTTCCCTACGGGCAGGGATGAGCTGCCTCCTTGCCTATCCATTCAGCTTTACGTCCCCCCTCCAAAATCTCAGAAAAACGCATCGCAGCTGTCCGACCTAGGCAACGGCTGCCTGGCCTATTTTACGGACATGTATGACATTCCTACATCGATAGGGATGATGTTTCTCAAGCTAGGAGAGACCGTAGAGAATCCTCCTGAGGGGCATGTTGCCTTTTACGAGAAAATGTTCGAGTTAAGGGTTAGGCTCCCCCTTCACCCTTCCGCACAGCTCGCGTCCAATGGCTGGGGCATCCTTCTCGGCTACATGCTGCCTGAGTTCCTCATTGGCCGGAAACGGAGGGTACCTAGCTTGGTAGCTACACATCGCTTATCGAGGTCCCTAACGGATAGGCCTCTGTTGGATCCGTCCCTTCCGCTCCCCATTCGGACCCGATCGAGCCCGAGTTCATGGGCTATTGAGAGGGCTGAGAAGGTTGGCCCCTCTGTAGTGGCCGACTCAAGGGGGTCGCACATCGCTAGGAATATAGGCAAACTTAGTGACCTTCATGGTGCGGAGCTCCTTGGACGAGAGCAGTGGGCGAATAAGGAGACCGCTGGTCATGCCAAGACAGTTGAGGAGGCCAATCTTACCAAGGCATCTGCATTAGTGTTTTTCGCATGCGGTACTCGTTCTATGGTGTACCTAAGGAATTGA

Coding sequence (CDS)

ATGGATGACGATCGGGGAGGTCAGCTGACAAAACTTAGAGCGATTCTCGGGGTACCTGGTATAGTCCTACTCGAGTTGGATTCCCCTGAGCAACCTTCAGTCCTAGCCATGGACCGGTCCGTGTTTCTCACACCAAGTTGCCGCAACCGACCTGACAATTCTATTGTTAGTCGTAGGAGATGTCTGATAGGGATAATAGCTCTAGGTCGGGGCCTGGGAGCTTGCAGGAGAGCTTCAAGAAACCTTTGGAGGGGTCCCCCATTGGCGTTCTCGAGTGTCAGGTTGGCCTTCGACGAGTCGTCATCCACCGAGTCTTCCAATAACAGGTCTTCTTTCCCTACGGGCAGGGATGAGCTGCCTCCTTGCCTATCCATTCAGCTTTACGTCCCCCCTCCAAAATCTCAGAAAAACGCATCGCAGCTGTCCGACCTAGGCAACGGCTGCCTGGCCTATTTTACGGACATGTATGACATTCCTACATCGATAGGGATGATGTTTCTCAAGCTAGGAGAGACCGTAGAGAATCCTCCTGAGGGGCATGTTGCCTTTTACGAGAAAATGTTCGAGTTAAGGGTTAGGCTCCCCCTTCACCCTTCCGCACAGCTCGCGTCCAATGGCTGGGGCATCCTTCTCGGCTACATGCTGCCTGAGTTCCTCATTGGCCGGAAACGGAGGGTACCTAGCTTGGTAGCTACACATCGCTTATCGAGGTCCCTAACGGATAGGCCTCTGTTGGATCCGTCCCTTCCGCTCCCCATTCGGACCCGATCGAGCCCGAGTTCATGGGCTATTGAGAGGGCTGAGAAGGTTGGCCCCTCTGTAGTGGCCGACTCAAGGGGGTCGCACATCGCTAGGAATATAGGCAAACTTAGTGACCTTCATGGTGCGGAGCTCCTTGGACGAGAGCAGTGGGCGAATAAGGAGACCGCTGGTCATGCCAAGACAGTTGAGGAGGCCAATCTTACCAAGGCATCTGCATTAGTGTTTTTCGCATGCGGTACTCGTTCTATGGTGTACCTAAGGAATTGA

Protein sequence

MDDDRGGQLTKLRAILGVPGIVLLELDSPEQPSVLAMDRSVFLTPSCRNRPDNSIVSRRRCLIGIIALGRGLGACRRASRNLWRGPPLAFSSVRLAFDESSSTESSNNRSSFPTGRDELPPCLSIQLYVPPPKSQKNASQLSDLGNGCLAYFTDMYDIPTSIGMMFLKLGETVENPPEGHVAFYEKMFELRVRLPLHPSAQLASNGWGILLGYMLPEFLIGRKRRVPSLVATHRLSRSLTDRPLLDPSLPLPIRTRSSPSSWAIERAEKVGPSVVADSRGSHIARNIGKLSDLHGAELLGREQWANKETAGHAKTVEEANLTKASALVFFACGTRSMVYLRN
Homology
[Close]
BLAST of Moc03g02710 vs. NCBI nr
Match: XP_022159063.1 (uncharacterized protein LOC111025502, partial [Momordica charantia])

HSP 1 Score: 59.7 bits (143), Expect = 5.7e-05
Identity = 31/79 (39.24%), Postives = 42/79 (53.16%), Query Frame = 0 

Query: 156 YDIPTSIGMMFLKLGETVENPPEGHVAFYEKMFELRVRLPLHP------------SAQLA 215
           + IP +I +   + GE  +NPPEG V  Y KMFE  +RLPLHP             AQ+A
Sbjct: 63  FAIPENILLRLPEEGERADNPPEGWVTLYFKMFEYGLRLPLHPFVQEFLFRTGLAPAQVA 122

Query: 216 SNGWGILLGYMLPEFLIGR 223
            NGWG++    +  +L  R
Sbjct: 123 PNGWGVIFALAILFWLRAR 141

[Close]
BLAST of Moc03g02710 vs. ExPASy TrEMBL
Match: A0A6J1DXS5 (uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025502 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.8e-05
Identity = 31/79 (39.24%), Postives = 42/79 (53.16%), Query Frame = 0 

Query: 156 YDIPTSIGMMFLKLGETVENPPEGHVAFYEKMFELRVRLPLHP------------SAQLA 215
           + IP +I +   + GE  +NPPEG V  Y KMFE  +RLPLHP             AQ+A
Sbjct: 63  FAIPENILLRLPEEGERADNPPEGWVTLYFKMFEYGLRLPLHPFVQEFLFRTGLAPAQVA 122

Query: 216 SNGWGILLGYMLPEFLIGR 223
            NGWG++    +  +L  R
Sbjct: 123 PNGWGVIFALAILFWLRAR 141

The following BLAST results are available for this feature:
BLAST of Moc03g02710 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022159063.15.7e-0539.24uncharacterized protein LOC111025502, partial [Momordica charantia][more]
BLAST of Moc03g02710 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc03g02710 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DXS52.8e-0539.24uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
BLAST of Moc03g02710 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc03g02710.1Moc03g02710.1mRNA