Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGCAGAGAATTATGCCATGGATATCCAGTTTGAAACGGTATCCAGGCGCCAGCCAGGTTCTTCCCAGAGAACCTTGACTATCCAATCAGGCTCTCCGAGCCTTCCAACTCCCTCAAGTACGTTGTTACGCCCCTTCGGCAATACAACGAGAAACAGGCGCCCTGTTAAGGCAGCAGCAGCTCCAAAACCTACGATTCCGAGGAATCCTTCCTCGTTTTCTCAAATCGTCAGGCCAAAGGTTTACCAGCCCAGGCCGCCAATTTATGGTTATTTCACCAAAACAACCCTGGTGGACTCAACCATTGAATCAGAGTTCGACGGACCTTCGGTCCAAGAAGTCTGTAGTCAAATATTTCCTCATGGCTTTAACTTCCTGCCAGAGGATCTTCAAAAGACCCGAACTTATTATGAGTTTATTCTGGTAGATTCAAAATCTGCAGAGATAACTCATATTCCAGACAGAAATGATCCTTCTAGGACCATTTACTCAAAACTCAAGATCTTCCGCATCCTTACCCCTTCCTCCTGGAAACAGGGTATGTTTGTAGGGAAGAAACTGACGGCAACCTTTCAACCTCAGACATACAACTACCTCGACTACATGAAAGTGTGGTACATTGTTTTCTGGTTGCAATGTTACAACCACTCTTGGTTTGTGACTTTTTGTAAGCAAGCTTACAAATCGCACTTTCCAAATTGGTTTCAAACTTGGTGGACATATTTTGGACTGTCCGAGGAAATTCTTCTGGTGGAAGTTCGGAGATCGTACCACCTGTTCCAACAAAGTATCTATTTGTCTCCCCTCTCTAAGACGTTTAGATTTGCTTTGTATTTTCAAATACCATGGATCTTTTGCTGGAATTTCCAGCTAGGACCCAGTGGAAACTTCAAAGCGTTGAGCAAAGCTTTACGCATCAAATGGTGGGAAAAATTCGATTATTTCTACCTAGAATCTGACAAGATGAAGGATTGGTTGAAAACCAACGTTCATCTTCAAGACATGACAAGGCAAGAAGATGAGAGCTTCCTTCTGGCCAAGAATGCTGTCATGAGCTCGCTAGCTGGGGCCGGATCCCAAGCCGACTTCAACTCAATACTCAACACAGTCGCGGTTCAGATCTCTGATCCAGACGACGTTCAGACAGACGTTGACTCTTCCGCCTCTATCAACAATGATGCCGTAGACGACGAAGAATACTTCGATCCCTTCGAAGGATACGACATCAACGACCCATATCTAGATTCACAGCCTAGCTGA
mRNA sequence
ATGAGTGCAGAGAATTATGCCATGGATATCCAGTTTGAAACGGTATCCAGGCGCCAGCCAGGTTCTTCCCAGAGAACCTTGACTATCCAATCAGGCTCTCCGAGCCTTCCAACTCCCTCAAGTACGTTGTTACGCCCCTTCGGCAATACAACGAGAAACAGGCGCCCTGTTAAGGCAGCAGCAGCTCCAAAACCTACGATTCCGAGGAATCCTTCCTCGTTTTCTCAAATCGTCAGGCCAAAGGTTTACCAGCCCAGGCCGCCAATTTATGGTTATTTCACCAAAACAACCCTGGTGGACTCAACCATTGAATCAGAGTTCGACGGACCTTCGGTCCAAGAAGTCTGTAGTCAAATATTTCCTCATGGCTTTAACTTCCTGCCAGAGGATCTTCAAAAGACCCGAACTTATTATGAGTTTATTCTGGTAGATTCAAAATCTGCAGAGATAACTCATATTCCAGACAGAAATGATCCTTCTAGGACCATTTACTCAAAACTCAAGATCTTCCGCATCCTTACCCCTTCCTCCTGGAAACAGGGTATGTTTGTAGGGAAGAAACTGACGGCAACCTTTCAACCTCAGACATACAACTACCTCGACTACATGAAAGTGTGGTACATTGTTTTCTGGTTGCAATGTTACAACCACTCTTGGTTTGTGACTTTTTGTAAGCAAGCTTACAAATCGCACTTTCCAAATTGGTTTCAAACTTGGTGGACATATTTTGGACTGTCCGAGGAAATTCTTCTGGTGGAAGTTCGGAGATCGTACCACCTGTTCCAACAAAGTATCTATTTGTCTCCCCTCTCTAAGACGTTTAGATTTGCTTTGTATTTTCAAATACCATGGATCTTTTGCTGGAATTTCCAGCTAGGACCCAGTGGAAACTTCAAAGCGTTGAGCAAAGCTTTACGCATCAAATGGTGGGAAAAATTCGATTATTTCTACCTAGAATCTGACAAGATGAAGGATTGGTTGAAAACCAACGTTCATCTTCAAGACATGACAAGGCAAGAAGATGAGAGCTTCCTTCTGGCCAAGAATGCTGTCATGAGCTCGCTAGCTGGGGCCGGATCCCAAGCCGACTTCAACTCAATACTCAACACAGTCGCGGTTCAGATCTCTGATCCAGACGACGTTCAGACAGACGTTGACTCTTCCGCCTCTATCAACAATGATGCCGTAGACGACGAAGAATACTTCGATCCCTTCGAAGGATACGACATCAACGACCCATATCTAGATTCACAGCCTAGCTGA
Coding sequence (CDS)
ATGAGTGCAGAGAATTATGCCATGGATATCCAGTTTGAAACGGTATCCAGGCGCCAGCCAGGTTCTTCCCAGAGAACCTTGACTATCCAATCAGGCTCTCCGAGCCTTCCAACTCCCTCAAGTACGTTGTTACGCCCCTTCGGCAATACAACGAGAAACAGGCGCCCTGTTAAGGCAGCAGCAGCTCCAAAACCTACGATTCCGAGGAATCCTTCCTCGTTTTCTCAAATCGTCAGGCCAAAGGTTTACCAGCCCAGGCCGCCAATTTATGGTTATTTCACCAAAACAACCCTGGTGGACTCAACCATTGAATCAGAGTTCGACGGACCTTCGGTCCAAGAAGTCTGTAGTCAAATATTTCCTCATGGCTTTAACTTCCTGCCAGAGGATCTTCAAAAGACCCGAACTTATTATGAGTTTATTCTGGTAGATTCAAAATCTGCAGAGATAACTCATATTCCAGACAGAAATGATCCTTCTAGGACCATTTACTCAAAACTCAAGATCTTCCGCATCCTTACCCCTTCCTCCTGGAAACAGGGTATGTTTGTAGGGAAGAAACTGACGGCAACCTTTCAACCTCAGACATACAACTACCTCGACTACATGAAAGTGTGGTACATTGTTTTCTGGTTGCAATGTTACAACCACTCTTGGTTTGTGACTTTTTGTAAGCAAGCTTACAAATCGCACTTTCCAAATTGGTTTCAAACTTGGTGGACATATTTTGGACTGTCCGAGGAAATTCTTCTGGTGGAAGTTCGGAGATCGTACCACCTGTTCCAACAAAGTATCTATTTGTCTCCCCTCTCTAAGACGTTTAGATTTGCTTTGTATTTTCAAATACCATGGATCTTTTGCTGGAATTTCCAGCTAGGACCCAGTGGAAACTTCAAAGCGTTGAGCAAAGCTTTACGCATCAAATGGTGGGAAAAATTCGATTATTTCTACCTAGAATCTGACAAGATGAAGGATTGGTTGAAAACCAACGTTCATCTTCAAGACATGACAAGGCAAGAAGATGAGAGCTTCCTTCTGGCCAAGAATGCTGTCATGAGCTCGCTAGCTGGGGCCGGATCCCAAGCCGACTTCAACTCAATACTCAACACAGTCGCGGTTCAGATCTCTGATCCAGACGACGTTCAGACAGACGTTGACTCTTCCGCCTCTATCAACAATGATGCCGTAGACGACGAAGAATACTTCGATCCCTTCGAAGGATACGACATCAACGACCCATATCTAGATTCACAGCCTAGCTGA
Protein sequence
MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSLPTPSSTLLRPFGNTTRNRRPVKAAAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTLVDSTIESEFDGPSVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYNYLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNFKALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDDEEYFDPFEGYDINDPYLDSQPS
Homology
BLAST of Moc03g02270 vs. NCBI nr
Match:
KAA0056777.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa] >KAA0059218.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYJ97600.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYK21092.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa])
HSP 1 Score: 647.1 bits (1668), Expect = 1.0e-181
Identity = 318/421 (75.53%), Postives = 362/421 (85.99%), Query Frame = 0
Query: 1 MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVK- 60
MSAENYAMD+QFE VSRR+ GS+QRTLTIQS S SL P PS+ LLRP G TT N+R
Sbjct: 1 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 60
Query: 61 AAAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTLVDSTIESEFDGPSVQEVCSQ 120
AA++ + IPRNPSS+SQIVRPK++QPRPPI GYFTKTT+VD TIE EFDGPSVQEVCSQ
Sbjct: 61 AASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQ 120
Query: 121 IFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSW 180
IFPHGFNFLPEDL KTRT+YE+ILVDSKSAEITH+PD+NDPS+ IYSKL+IFR+LTPS W
Sbjct: 121 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 180
Query: 181 KQGMFVGKKLTATFQPQTYNYLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQT 240
KQGMFVG+K + F+P +YNY DY K WYIVFWLQ YNHSWFVTFCKQAYK HFPNWFQ
Sbjct: 181 KQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQN 240
Query: 241 WWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF 300
WW YFGLSEEI VEV+RSYHLFQQSIY SPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Sbjct: 241 WWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF 300
Query: 301 KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGA 360
KALSK+LRIKWWEKF+Y +LE +K+KDW K N+HLQDMTRQEDE+FLL KNAVMS+LAGA
Sbjct: 301 KALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLAGA 360
Query: 361 GSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDDEEYFDPFEGYDINDPYLDSQ 420
+Q +FNS++N V V +SD +D + S AS+NN VDD +Y DP+EG DINDP+LD+Q
Sbjct: 361 STQQEFNSVVNNVVVNLSDDNDDLPEDVSPASVNN--VDDFDY-DPYEGLDINDPFLDTQ 418
BLAST of Moc03g02270 vs. NCBI nr
Match:
KAA0063832.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa])
HSP 1 Score: 645.6 bits (1664), Expect = 3.0e-181
Identity = 317/421 (75.30%), Postives = 361/421 (85.75%), Query Frame = 0
Query: 1 MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVK- 60
MSAENYAMD+QFE VSRR+ GS+QRTLTIQS S SL P PS+ LLRP G TT N+R
Sbjct: 1 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 60
Query: 61 AAAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTLVDSTIESEFDGPSVQEVCSQ 120
AA++ + IPRNPSS+SQIVRPK++QPRPPI GYFTKTT+VD TIE EFDGPSVQEVCSQ
Sbjct: 61 AASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQ 120
Query: 121 IFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSW 180
IFPHGFNFLPEDL KTRT+YE+ILVDSKSAEITH+PD+NDPS+ IYSKL+IFR+LTPS W
Sbjct: 121 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 180
Query: 181 KQGMFVGKKLTATFQPQTYNYLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQT 240
KQGMFVG+K + F+P +YNY DY K WYIVFWLQ YNHSWFVTFCKQAYK HFPNWFQ
Sbjct: 181 KQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQN 240
Query: 241 WWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF 300
WW YFGLSEEI VEV+RSYHLFQQSIY SPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Sbjct: 241 WWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF 300
Query: 301 KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGA 360
KALSK+LRIKWWEKF+Y +LE +K+KDW K N+HLQDMTRQEDE+FLL KNAVMS+LAGA
Sbjct: 301 KALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLAGA 360
Query: 361 GSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDDEEYFDPFEGYDINDPYLDSQ 420
+Q +FNS++N V V +SD +D + S AS+NN DD +Y DP+EG DINDP+LD+Q
Sbjct: 361 STQQEFNSVVNNVVVNLSDDNDDLPEDVSPASVNN--ADDFDY-DPYEGLDINDPFLDTQ 418
BLAST of Moc03g02270 vs. NCBI nr
Match:
KAA0068172.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa])
HSP 1 Score: 645.6 bits (1664), Expect = 3.0e-181
Identity = 317/421 (75.30%), Postives = 362/421 (85.99%), Query Frame = 0
Query: 1 MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVK- 60
MSAENYAMD+QFE VSRR+ GS+QRTLTIQS S SL P PS+ LLRP G TT N+R
Sbjct: 1 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 60
Query: 61 AAAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTLVDSTIESEFDGPSVQEVCSQ 120
AA++ + IPRNPSS+SQIVRPK++QPRPPI GYFTKTT+VD TIE +FDGPSVQEVCSQ
Sbjct: 61 AASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPKFDGPSVQEVCSQ 120
Query: 121 IFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSW 180
IFPHGFNFLPEDL KTRT+YE+ILVDSKSAEITH+PD+NDPS+ IYSKL+IFR+LTPS W
Sbjct: 121 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 180
Query: 181 KQGMFVGKKLTATFQPQTYNYLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQT 240
KQGMFVG+K + F+P +YNY DY K WYIVFWLQ YNHSWFVTFCKQAYK HFPNWFQ
Sbjct: 181 KQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQN 240
Query: 241 WWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF 300
WW YFGLSEEI VEV+RSYHLFQQSIY SPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Sbjct: 241 WWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF 300
Query: 301 KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGA 360
KALSK+LRIKWWEKF+Y +LE +K+KDW K N+HLQDMTRQEDE+FLL KNAVMS+LAGA
Sbjct: 301 KALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLAGA 360
Query: 361 GSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDDEEYFDPFEGYDINDPYLDSQ 420
+Q +FNS++N V V +SD +D + S AS+NN VDD +Y DP+EG DINDP+LD+Q
Sbjct: 361 STQQEFNSVVNNVVVNLSDDNDDLPEDVSPASVNN--VDDLDY-DPYEGLDINDPFLDTQ 418
BLAST of Moc03g02270 vs. NCBI nr
Match:
TYK28077.1 (polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 637.9 bits (1644), Expect = 6.2e-179
Identity = 313/421 (74.35%), Postives = 358/421 (85.04%), Query Frame = 0
Query: 1 MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVKA 60
MSAENYAMD+QFE VSRR+ GS+QRTLTIQS S SL P PS+ LLRP G TT N R
Sbjct: 1 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASP 60
Query: 61 -AAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTLVDSTIESEFDGPSVQEVCSQ 120
A++ + IPRNPSS+SQIVRPK++QPRPPI GYFTKTT+VD TIE EFDGPSVQEVCSQ
Sbjct: 61 DASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQ 120
Query: 121 IFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSW 180
IFPHGFNFLPEDL KTRT+YE+ILVDSKSAEITH+PD+NDPS+ IYSKL+IFR+LTPS W
Sbjct: 121 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 180
Query: 181 KQGMFVGKKLTATFQPQTYNYLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQT 240
KQGMFVG+K + F+P +YNY DY K WYIVFWL YNHSWFVTFCKQAYK HFPNWFQ
Sbjct: 181 KQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWFQN 240
Query: 241 WWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF 300
WW YFGLSEEI VE++RSYHLFQQSIY SPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Sbjct: 241 WWMYFGLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF 300
Query: 301 KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGA 360
KALSK+L IKWWEKF+Y +LE +K+KDW K N+HLQDMTRQEDE+FLL KNAVMS+LAGA
Sbjct: 301 KALSKSLMIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLAGA 360
Query: 361 GSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDDEEYFDPFEGYDINDPYLDSQ 420
+Q +FNS++N V V +SD +D + S AS+N+ VDD +Y DP+EG DINDP+LD+Q
Sbjct: 361 STQQEFNSVVNNVVVNLSDDNDDLPEDASPASVND--VDDLDY-DPYEGLDINDPFLDTQ 418
BLAST of Moc03g02270 vs. NCBI nr
Match:
KAA0032916.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYK28084.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa])
HSP 1 Score: 635.6 bits (1638), Expect = 3.1e-178
Identity = 312/421 (74.11%), Postives = 357/421 (84.80%), Query Frame = 0
Query: 1 MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVKA 60
MSAENYAMD+QFE VSRR+ GS+QRTLTIQS S SL P PS+ LLRP G TT N R
Sbjct: 1 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASP 60
Query: 61 -AAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTLVDSTIESEFDGPSVQEVCSQ 120
A++ + IPRNPSS+SQIVRPK++QPRPPI GYFT TT+VD TIE EFDGPSVQEVCSQ
Sbjct: 61 DASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTNTTMVDLTIEPEFDGPSVQEVCSQ 120
Query: 121 IFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSW 180
IFPHGFNFLPEDL KTRT+YE+ILVDSKSAEITH+PD+NDPS+ IYSKL+IFR+LTPS W
Sbjct: 121 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 180
Query: 181 KQGMFVGKKLTATFQPQTYNYLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQT 240
KQGMFVG+K + F+P +YNY DY K WYIVFWL YNHSWFVTFCKQAYK HFPNWFQ
Sbjct: 181 KQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWFQN 240
Query: 241 WWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF 300
WW YFGLSEEI VE++RSYHLFQQSIY SPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Sbjct: 241 WWMYFGLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF 300
Query: 301 KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGA 360
KALSK+LRIKWWEKF+Y +LE +K+KDW K N+HLQDMT QEDE+FLL KNAVMS+LAGA
Sbjct: 301 KALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTTQEDEAFLLTKNAVMSTLAGA 360
Query: 361 GSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDDEEYFDPFEGYDINDPYLDSQ 420
+Q +FNS++N V V +SD +D + S AS+N+ VDD +Y DP+EG DINDP+LD+Q
Sbjct: 361 STQQEFNSVVNNVVVNLSDDNDDLPEDASLASVND--VDDLDY-DPYEGLDINDPFLDTQ 418
BLAST of Moc03g02270 vs. ExPASy TrEMBL
Match:
A0A5A7UVN1 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00580 PE=4 SV=1)
HSP 1 Score: 647.1 bits (1668), Expect = 5.0e-182
Identity = 318/421 (75.53%), Postives = 362/421 (85.99%), Query Frame = 0
Query: 1 MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVK- 60
MSAENYAMD+QFE VSRR+ GS+QRTLTIQS S SL P PS+ LLRP G TT N+R
Sbjct: 1 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 60
Query: 61 AAAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTLVDSTIESEFDGPSVQEVCSQ 120
AA++ + IPRNPSS+SQIVRPK++QPRPPI GYFTKTT+VD TIE EFDGPSVQEVCSQ
Sbjct: 61 AASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQ 120
Query: 121 IFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSW 180
IFPHGFNFLPEDL KTRT+YE+ILVDSKSAEITH+PD+NDPS+ IYSKL+IFR+LTPS W
Sbjct: 121 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 180
Query: 181 KQGMFVGKKLTATFQPQTYNYLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQT 240
KQGMFVG+K + F+P +YNY DY K WYIVFWLQ YNHSWFVTFCKQAYK HFPNWFQ
Sbjct: 181 KQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQN 240
Query: 241 WWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF 300
WW YFGLSEEI VEV+RSYHLFQQSIY SPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Sbjct: 241 WWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF 300
Query: 301 KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGA 360
KALSK+LRIKWWEKF+Y +LE +K+KDW K N+HLQDMTRQEDE+FLL KNAVMS+LAGA
Sbjct: 301 KALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLAGA 360
Query: 361 GSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDDEEYFDPFEGYDINDPYLDSQ 420
+Q +FNS++N V V +SD +D + S AS+NN VDD +Y DP+EG DINDP+LD+Q
Sbjct: 361 STQQEFNSVVNNVVVNLSDDNDDLPEDVSPASVNN--VDDFDY-DPYEGLDINDPFLDTQ 418
BLAST of Moc03g02270 vs. ExPASy TrEMBL
Match:
A0A5A7V6D1 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00540 PE=4 SV=1)
HSP 1 Score: 645.6 bits (1664), Expect = 1.4e-181
Identity = 317/421 (75.30%), Postives = 361/421 (85.75%), Query Frame = 0
Query: 1 MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVK- 60
MSAENYAMD+QFE VSRR+ GS+QRTLTIQS S SL P PS+ LLRP G TT N+R
Sbjct: 1 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 60
Query: 61 AAAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTLVDSTIESEFDGPSVQEVCSQ 120
AA++ + IPRNPSS+SQIVRPK++QPRPPI GYFTKTT+VD TIE EFDGPSVQEVCSQ
Sbjct: 61 AASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQ 120
Query: 121 IFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSW 180
IFPHGFNFLPEDL KTRT+YE+ILVDSKSAEITH+PD+NDPS+ IYSKL+IFR+LTPS W
Sbjct: 121 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 180
Query: 181 KQGMFVGKKLTATFQPQTYNYLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQT 240
KQGMFVG+K + F+P +YNY DY K WYIVFWLQ YNHSWFVTFCKQAYK HFPNWFQ
Sbjct: 181 KQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQN 240
Query: 241 WWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF 300
WW YFGLSEEI VEV+RSYHLFQQSIY SPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Sbjct: 241 WWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF 300
Query: 301 KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGA 360
KALSK+LRIKWWEKF+Y +LE +K+KDW K N+HLQDMTRQEDE+FLL KNAVMS+LAGA
Sbjct: 301 KALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLAGA 360
Query: 361 GSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDDEEYFDPFEGYDINDPYLDSQ 420
+Q +FNS++N V V +SD +D + S AS+NN DD +Y DP+EG DINDP+LD+Q
Sbjct: 361 STQQEFNSVVNNVVVNLSDDNDDLPEDVSPASVNN--ADDFDY-DPYEGLDINDPFLDTQ 418
BLAST of Moc03g02270 vs. ExPASy TrEMBL
Match:
A0A5A7VIK9 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G001410 PE=4 SV=1)
HSP 1 Score: 645.6 bits (1664), Expect = 1.4e-181
Identity = 317/421 (75.30%), Postives = 362/421 (85.99%), Query Frame = 0
Query: 1 MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVK- 60
MSAENYAMD+QFE VSRR+ GS+QRTLTIQS S SL P PS+ LLRP G TT N+R
Sbjct: 1 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 60
Query: 61 AAAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTLVDSTIESEFDGPSVQEVCSQ 120
AA++ + IPRNPSS+SQIVRPK++QPRPPI GYFTKTT+VD TIE +FDGPSVQEVCSQ
Sbjct: 61 AASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPKFDGPSVQEVCSQ 120
Query: 121 IFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSW 180
IFPHGFNFLPEDL KTRT+YE+ILVDSKSAEITH+PD+NDPS+ IYSKL+IFR+LTPS W
Sbjct: 121 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 180
Query: 181 KQGMFVGKKLTATFQPQTYNYLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQT 240
KQGMFVG+K + F+P +YNY DY K WYIVFWLQ YNHSWFVTFCKQAYK HFPNWFQ
Sbjct: 181 KQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQN 240
Query: 241 WWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF 300
WW YFGLSEEI VEV+RSYHLFQQSIY SPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Sbjct: 241 WWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF 300
Query: 301 KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGA 360
KALSK+LRIKWWEKF+Y +LE +K+KDW K N+HLQDMTRQEDE+FLL KNAVMS+LAGA
Sbjct: 301 KALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLAGA 360
Query: 361 GSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDDEEYFDPFEGYDINDPYLDSQ 420
+Q +FNS++N V V +SD +D + S AS+NN VDD +Y DP+EG DINDP+LD+Q
Sbjct: 361 STQQEFNSVVNNVVVNLSDDNDDLPEDVSPASVNN--VDDLDY-DPYEGLDINDPFLDTQ 418
BLAST of Moc03g02270 vs. ExPASy TrEMBL
Match:
A0A5D3DW87 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003410 PE=4 SV=1)
HSP 1 Score: 637.9 bits (1644), Expect = 3.0e-179
Identity = 313/421 (74.35%), Postives = 358/421 (85.04%), Query Frame = 0
Query: 1 MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVKA 60
MSAENYAMD+QFE VSRR+ GS+QRTLTIQS S SL P PS+ LLRP G TT N R
Sbjct: 1 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASP 60
Query: 61 -AAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTLVDSTIESEFDGPSVQEVCSQ 120
A++ + IPRNPSS+SQIVRPK++QPRPPI GYFTKTT+VD TIE EFDGPSVQEVCSQ
Sbjct: 61 DASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQ 120
Query: 121 IFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSW 180
IFPHGFNFLPEDL KTRT+YE+ILVDSKSAEITH+PD+NDPS+ IYSKL+IFR+LTPS W
Sbjct: 121 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 180
Query: 181 KQGMFVGKKLTATFQPQTYNYLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQT 240
KQGMFVG+K + F+P +YNY DY K WYIVFWL YNHSWFVTFCKQAYK HFPNWFQ
Sbjct: 181 KQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWFQN 240
Query: 241 WWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF 300
WW YFGLSEEI VE++RSYHLFQQSIY SPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Sbjct: 241 WWMYFGLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF 300
Query: 301 KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGA 360
KALSK+L IKWWEKF+Y +LE +K+KDW K N+HLQDMTRQEDE+FLL KNAVMS+LAGA
Sbjct: 301 KALSKSLMIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLAGA 360
Query: 361 GSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDDEEYFDPFEGYDINDPYLDSQ 420
+Q +FNS++N V V +SD +D + S AS+N+ VDD +Y DP+EG DINDP+LD+Q
Sbjct: 361 STQQEFNSVVNNVVVNLSDDNDDLPEDASPASVND--VDDLDY-DPYEGLDINDPFLDTQ 418
BLAST of Moc03g02270 vs. ExPASy TrEMBL
Match:
A0A5A7SS94 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003480 PE=4 SV=1)
HSP 1 Score: 635.6 bits (1638), Expect = 1.5e-178
Identity = 312/421 (74.11%), Postives = 357/421 (84.80%), Query Frame = 0
Query: 1 MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVKA 60
MSAENYAMD+QFE VSRR+ GS+QRTLTIQS S SL P PS+ LLRP G TT N R
Sbjct: 1 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASP 60
Query: 61 -AAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTLVDSTIESEFDGPSVQEVCSQ 120
A++ + IPRNPSS+SQIVRPK++QPRPPI GYFT TT+VD TIE EFDGPSVQEVCSQ
Sbjct: 61 DASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTNTTMVDLTIEPEFDGPSVQEVCSQ 120
Query: 121 IFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSW 180
IFPHGFNFLPEDL KTRT+YE+ILVDSKSAEITH+PD+NDPS+ IYSKL+IFR+LTPS W
Sbjct: 121 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 180
Query: 181 KQGMFVGKKLTATFQPQTYNYLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQT 240
KQGMFVG+K + F+P +YNY DY K WYIVFWL YNHSWFVTFCKQAYK HFPNWFQ
Sbjct: 181 KQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWFQN 240
Query: 241 WWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF 300
WW YFGLSEEI VE++RSYHLFQQSIY SPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Sbjct: 241 WWMYFGLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF 300
Query: 301 KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGA 360
KALSK+LRIKWWEKF+Y +LE +K+KDW K N+HLQDMT QEDE+FLL KNAVMS+LAGA
Sbjct: 301 KALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTTQEDEAFLLTKNAVMSTLAGA 360
Query: 361 GSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDDEEYFDPFEGYDINDPYLDSQ 420
+Q +FNS++N V V +SD +D + S AS+N+ VDD +Y DP+EG DINDP+LD+Q
Sbjct: 361 STQQEFNSVVNNVVVNLSDDNDDLPEDASLASVND--VDDLDY-DPYEGLDINDPFLDTQ 418
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0056777.1 | 1.0e-181 | 75.53 | Retrotransposable element Tf2 [Cucumis melo var. makuwa] >KAA0059218.1 Retrotran... | [more] |
| KAA0063832.1 | 3.0e-181 | 75.30 | Retrotransposable element Tf2 [Cucumis melo var. makuwa] | [more] |
| KAA0068172.1 | 3.0e-181 | 75.30 | Retrotransposable element Tf2 [Cucumis melo var. makuwa] | [more] |
| TYK28077.1 | 6.2e-179 | 74.35 | polyprotein [Cucumis melo var. makuwa] | [more] |
| KAA0032916.1 | 3.1e-178 | 74.11 | Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYK28084.1 Retrotransp... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7UVN1 | 5.0e-182 | 75.53 | Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
| A0A5A7V6D1 | 1.4e-181 | 75.30 | Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
| A0A5A7VIK9 | 1.4e-181 | 75.30 | Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
| A0A5D3DW87 | 3.0e-179 | 74.35 | Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003410 P... | [more] |
| A0A5A7SS94 | 1.5e-178 | 74.11 | Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
