Moc03g01960 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g01960
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	DNA-directed DNA polymerase
Location	chr3: 1473078 .. 1478797 (-)
RNA-Seq Expression	Moc03g01960
Synteny	Moc03g01960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGAGGATAACGTTGTGCAGCAGGAGGAACTTCAGACAGAGAAGGTAACTGAGAGTATAGTAGAGAATATGAATACTGAAGAGAATGTAGTGAATGATGCTAGAGCATCAGTTGAGCAAACAGCGCAACCAGAACCAGTGGCACCACAAAGAATGGTGAAGCAACCTGAGCCAGAGATAAACAAAACTAAGAGGGCCGCGAAAACAGAGCCTGTTGAGGAAGTGGCTACAGAGACACCAGTGCAAAAGAATGTAAAAATTTCAGTGGAACATCAAGTTTCTTCTCCTTCCCCATAACGGTTGCAAAAGAAAAACCAAGACGTGCAGTTTGATCGTTTTTTGGAGGTACTAAAACAGCTCCATATCAACATACCCTTGGTAGAAGCATTAAAACAGATGTCAAACTACGTCAAATTCTTCAAGGATGTATTGGCAAAGAAAATAAGGCTAGGTGGATTTGAAACGGTGGCCCTTACAAAAGAATGCAGTGCCATTTTGATAGGAAAGCTCCCTCAGAAAATTGGTGACCCGGGGAGTTTTACCATTCCTATGTCTATAGGAGGAAAGAATGTAGGGCATGCATTGTGTGACCTGGGCGCTAGCATCAACCTGATGCCTTTATTAGTGTATCAAAAGCTAGGGATTGGTGAAGCAAAACCAACAACTGTCACCCTATAGTTAGCAGATAGGTCCATTACACATTCAGAGGGTAAGCTAGAAGATGTTTTGGTTCAGGTAGATAAATTTATCTTTTCTGCAGATTTTATCCTACTGGATTATGAAGCTGACAAGGAGATCCAATCAGTTTGGGAAGACCATTCTTATCCACGGGTAGAGCATTGATCGATGTACACAATTGAGAGCTCACTATGAGAGTTAATGACTAGCAGGTGACATTATCTGTTTTTAACTCCATTAAATACCCTAATGATGTGGAAGAATGCTCTTTGTTAAGGATTGCAGATGATTTGAAGAGTGATGAAATACAAACGGAAGAGTTGTTGAACCAAATGGAGGACGAGTTAACTAGAATTCTCAAAACAGGAGACAAGGAGGCCAAGCTGATCCAAGACCAGCCGAATGAACCTGCTACTGATAGAATCTATAAGAAAACGTTTGAACAATTGGAATTTAATGACAGGGTGCACGCGCCACTGCAGCCATCCATGGTGAAGGCCCTCAAATTAGAGCTGAAAGTCCTACCATCACACCTTAAGTATGCTTATCTGGGAGAAGCAAAAACACTGCCAGTCATCATTGCAGCAGGCTTAGCCGAAGAAAAAGAGTGTTGTTTGATAGAAATGTTGAAGAATCACAAGAGGCAATTGGTTGGACTTTAGCTGACATAAAGGGGATCAGTCTAAGTTATTGCATGCATAAGATTAATATAGAAGAAGGATGTAAGAACTCAATTGAGCACCAAAGAAGGCTGAACCCTGTCATGAAGGAAGTCGTCAAGAAGGAAATCATCAAATGGCTTGATGCTGGGATAATTTACCCAATAGCTGATACTGATTGGGTAAGCCCAGTCCAATGTGTACCCAAGAAGGGAGGGATCACAGTGGTGCCAAATGACAATAACGAGTTGATCCCCACAAGAACCATAACAGGTTGGCGCATCTGTATGGATTATAGGGAATTGAATAAGGCAATCAACAAAGACCACTTTCCATTGCGATTCATCGATCAGATGCTAGATCGATTGGCTGGGCAAGAATACTACTGTTTCTTGGATGGATACGGTGGCTACAACCAGATTACCATTGCTCCTCAAGACCAGCAAAAGACTACATTCACTTGTCCATATGGTACGTTTGCATTTAGGAGAATGCCCTTTGGACTGTGCAATGCTCCAGTAACATTCCAATGGTGTATGATGGCAGTCTTTTCGAACTTAATAGAAACCGTGGTTGAGGTCTTCATAGACGACTTCTCAGTCTTTGGAAGGGACTTCAGCGAGTGTCTGAGCAACCTGGAGCAAGTGTTGAGGAGGTGTGAAGACACCAATTTAGTGCTCAACTGGGAAAAATGCCACTTTATGGTGAAGTAAGGGATAATGTTGGGCCACAAAGTATCCAAGAAGGGAATAGAGGTAGATCGCGCCAAGATTGAAGTTATAGAGAAGCTGCCACCTCCCACCTCAATTAGAGGAGTTAGAAGTTTCCTTGGACATGCAGGGTTTTACAGGAGATTCATCAAGGATTTTTCTAAAATCTGTAAGCCTTTATGCTGTCTTTTAGAAAGTGAACGCATTTTTAACTTCTCTTCTGATTGTTTTCAGGCTTTTATCACATTGAAAACAACTCTCATCGAAGCCTCCATAATGACTACACCAAACTGGAAGGAACCGTTTGAAGTCATGTGTGACGCTAGTGATTACGCCGTAGGAGTTGTGCTGGGACAAAGGAAAGGGAAGCTAATTCACCCAATTTACTATGCCAACAGAACATTGGTGGAGGCTCAACTCAATTACACCACCACTGAGAAAGAGCTGCTAGTGGTGGTCTTTGCCTTAAAAAATTCAGAGCTTACCTTATTAGAACGAAGGTAGTGGTATACACTGACCACGTAGCCATCAAGTATCTGCTCTCCAAAAAGGACACCAAGCTAAGGCTGATTCGATGGGTGTTACTGTTACAAGAATTTGATTTAAAGATCAGAGATAAAAAAGTATCAGAGAACCAAGTAGCAGACTATTTATCGAGAGTGGAGCTTTAGGGAACAGTAAAAGGACAACAAGCCGCGATAAGAGATGCATTTCCTTATGAGCAATTGTTAGTGGTGACAGAACAGAGAAAAGATTTGGAGCCATGGTTTTCTGATATGGCTAATTATGTGGCTAGTGGAATTTTGCCATCAGACATGAAAAGGCAGCATCTTAAACGATTCATTCATAACAGGAAGTTTTACTACTGGGATGACCCTTATTTGTACAAACTATGCAAAGACCAAATTATGCGCAGATGTGTTGACAGTGCTGAAGCATCAATAGTGTTGGAGCATTGTCACTCTGCCCCTTATGGTGGACATTTTGGAGGACATCAAACTGCAGCCAAAATCTTCCAAAGTGGCTACTATTGGCCAACTGTCTTCCAAGATTCACACTCATACGTCAAGAACTGTGACAAATGCCAGAGGGTGGGAAACATTTCAAACAAGTCGGAAATGCCTCTGAATTTTATTCTTGAGGTAGAACTCTTTGATATCTGGGGAATAGATTTCATGGGACCTTTCCCTCCATCAAATGGTAACCTGTTGGCAGTGGATTATGTTTATAAATGGGTGCAAGCAATAGATTGTGTAACATGCGATGCGAAAATAGTTTTGAAATTCCTACACAAGAACATATTCATCAAGTTTGGAACCCCTAGGACAGTTATAAATGATGAAGGGTCTCATTTTGTCAACAAGGTTATGAATTCCTTGCTGGCAAAATACAATATCAAGCATAAGGTATCCACCTCATATCACCCTCAAACAAACGGTCAAGCAGAGGTATCAAATAGAGAAATTAAGGGAATTTTAGAGAAGGTAGTACATATCAGTAGAAAAGATTGGTCTTACAAGTTAGATGATGCATTACGGGCATATAGGACTGCCTACAAAACTCCAATAGGAACATCCCCTTATAAGCTAGTCTTCGAAAAGGCATGTCATCTCCCACTCGAACTGGAGCAAAAGGCATTTTGGGCTGTGAAGAGCTTGAATATGGATCTATCAGTAATAGGAGAAGCAAGAAAATTTCAGCTGCTAGAGTTGAATAAATTCATAAGAGAATCCTACGAGAATGCAAAAGTTTACAAAGAGAATACCAAAGTTTGGCACAACAGAAGAATAAAGCCAAGAAAATTTGACGAAGAAAAGAAGGTGTTGTTATTGAACTCAAGGCTGAGGTTGTTTCCTGAAAAGTTAAAGTCAAGTTGGTTAGGTCCATTCATAGTAGTGAAGGTATATCCTTATAGAGCTATAACCGTCAAAGAAGATGACACTGAAAAGGAGTTCACCATGAATGGGCAAAGATTGAAGCACTACTGGGGAGGAGAAGTGGTGAGGAAGATGGATTCCCACCAGCTGAGATCAGCATAAGTGGTTACCAAGACAAAATAAAACGGGAAGAATCCTTTGTTTCTTCTCTCCCTATAGTTTAAATCTCGTTAATTCAGTTTAATTTTCTTAGTGTTAGTAGGAAAATTTTAATTAGAAGCATGTTTCTTGTTTTGTTTCATTTTTGTTTCAGGCTAAGGAAAGACTCTACCAGTTCGTTGCTAAAATTACTAGAGCAAAGTAGGGGACGTTGAGGAAAGAGTGGTCAACCTCGTCGATGCAGGAGCATAAATCAAGGATACGAAAAATAAAGTTGGAATTTAAAAAGAGAAAAGCAGTTAAGGAGAGAGAAAAGCAATTAGTGCCTGTATCAGAAAATCTGTCAGAAAAGAAATCGTGGGTCACAAGTTTTTAAAACCGAATTATCTTAGACAGTTTTCTCCCACATTTTGAGAAAAGCAACGCATTTTTCTAGGAAAGGTAAAAAGGGTGGGAGTTTTTGAATTCGAAATTTTTAGAAAAAGAAGGAAAGGTAATTAGGGGAGTGGTTGGCTCTTTTTTCCTAAACATTAATGAGGAAAGGACTGCTAAGTCTATTTAAGAAAGCCCGAAGCAGGGGAATTAGTATCAGAAATTTCGAATCCCTAATTTTGCGCTAACATCTTTCCCCTCCCTCCCTCTTCCTTCGTCACAGTCTATTTAGTCGCTTTCTCTCAACCCTAGGCCCCCTGTAGCATCGTCAAGTCGTCAGCTTCGTCATCCCAACATGCCTCGGGTTAAAGCAAAAGCAAGGAAAGGTAAGAAAACCATCCCCCCCAAGAGCGGACACCGTCTCCTTCACCGGAAAAGTCGCCAGAGCTAGCGAAAGCTCCACCCCAACCCGACCCGTTACCCGAAAACACTGCCCCAGATAGCGAAATCCCTTCCCCACCTAAAAAGAAACCCGTTGCCAAGAGAGGAAGGAAAGCCGCGAAAGGAAAGAAGCAGCCGCCTGTTCAAGTAGAAGAGGAGGAGCAGCTGGTTTTGGGCAGCCAAACCGATGCAGTCGGTCATAATGCTGAGCATGAAGAAGTACAACATGCCGAGACAGAGGTAGAAATAGGTCCAGAACTGTCGCTTGAAGCCAGACGCAGAGTCGAGGATTTTATGCAAAAGCTCTTCCAAGCGGACAGTAGCCATGAGCAAGCGGGCAGTGGTGAGGATAATTTGGGGAAGGCGGCGCCACTAAGGAAACAGGCAGAGAAGAAGAATAAGCTCTGGCTGACGAAGAGCAAGAAGAAAGAGAAGACGGGGAAGAAGTAGCTCCAGTTACCACAAGAAAAATGCAGAGAAAGAGGAAGCCCTCCCTAGTTGCAGAGCCTGGCAAATGGAAGAGGCCCAAACAGAAGGTCGACATGCAGGCTAAGAAAAAGGGAAAAGAGAAGGTTGTTGTAGGGCCCTCAAAATTTTTGCGATTTGTCGATTCTGCAGAATCCGAGTGGTTTGAAAGCCTCAAAAAGTGCAATCTGCTAGGAGAAAGGGGCTTTCCATCTGATTCATCCATGCCCCGTTTGTCTCCACCACCATCAACAATCATGAGTGGCAAACCGTTTGCGCACAGCCCAAGCCTACGATCATCCAAATTGTTCAAGAATTCTACGCTAACCTCAACCCTAGTGACTATTCCAATGTGA

mRNA sequence

ATGCAAGAGGATAACGTTGTGCAGCAGGAGGAACTTCAGACAGAGAAGGTAACTGAGAGTATAGTAGAGAATATGAATACTGAAGAGAATGTAGTGAATGATGCTAGAGCATCAGTTGAGCAAACAGCGCAACCAGAACCAGTGGCACCACAAAGAATGGTGAAGCAACCTGAGCCAGAGATAAACAAAACTAAGAGGGCCGCGAAAACAGAGCCTGTTGAGGAAGTGGCTACAGAGACACCAGTGCAAAAGAATGTGACATTATCTGTTTTTAACTCCATTAAATACCCTAATGATGTGGAAGAATGCTCTTTGTTAAGGATTGCAGATGATTTGAAGAGTGATGAAATACAAACGGAAGAGTTGTTGAACCAAATGGAGGACGAGTTAACTAGAATTCTCAAAACAGGAGACAAGGAGGCCAAGCTGATCCAAGACCAGCCGAATGAACCTGCTACTGATAGAATCTATAAGAAAACGTTTGAACAATTGGAATTTAATGACAGGGTGCACGCGCCACTGCAGCCATCCATGGTGAAGGCCCTCAAATTAGAGCTGAAAGTCCTACCATCACACCTTAAGTATGCTTATCTGGGAGAAGCAAAAACACTGCCAGTCATCATTGCAGCAGGCTTAGCCGAAGAAAAAGAGTGTTGTTTGATAGAAATGTTGAAGAATCACAAGAGGCAATTGTCGCCAGAGCTAGCGAAAGCTCCACCCCAACCCGACCCGTTACCCGAAAACACTGCCCCAGATAGCGAAATCCCTTCCCCACCTAAAAAGAAACCCGTTGCCAAGAGAGGAAGGAAAGCCGCGAAAGGAAAGAAGCAGCCGCCTGTTCAAGTAGAAGAGGAGGAGCAGCTGGTTTTGGGCAGCCAAACCGATGCAGTCGGTCATAATGCTGAGCATGAAGAAGTACAACATGCCGAGACAGAGGTAGAAATAGGTCCAGAACTGTCGCTTGAAGCCAGACGCAGAGTCGAGGATTTTATGCAAAAGCTCTTCCAAGCGGACAGTAGCCATGAGCAAGCGGGCAGTGTTACCACAAGAAAAATGCAGAGAAAGAGGAAGCCCTCCCTAGTTGCAGAGCCTGGCAAATGGAAGAGGCCCAAACAGAAGGTCGACATGCAGGCTAAGAAAAAGGGAAAAGAGAAGGTTGTTGTAGGGCCCTCAAAATTTTTGCGATTTGTCGATTCTGCAGAATCCGAGTGGTTTGAAAGCCTCAAAAAGTGCAATCTGCTAGGAGAAAGGGGCTTTCCATCTGATTCATCCATGCCCCGTTTGTCTCCACCACCATCAACAATCATGAGTGGCAAACCGTTTGCGCACAGCCCAAGCCTACGATCATCCAAATTGTTCAAGAATTCTACGCTAACCTCAACCCTAGTGACTATTCCAATGTGA

Coding sequence (CDS)

ATGCAAGAGGATAACGTTGTGCAGCAGGAGGAACTTCAGACAGAGAAGGTAACTGAGAGTATAGTAGAGAATATGAATACTGAAGAGAATGTAGTGAATGATGCTAGAGCATCAGTTGAGCAAACAGCGCAACCAGAACCAGTGGCACCACAAAGAATGGTGAAGCAACCTGAGCCAGAGATAAACAAAACTAAGAGGGCCGCGAAAACAGAGCCTGTTGAGGAAGTGGCTACAGAGACACCAGTGCAAAAGAATGTGACATTATCTGTTTTTAACTCCATTAAATACCCTAATGATGTGGAAGAATGCTCTTTGTTAAGGATTGCAGATGATTTGAAGAGTGATGAAATACAAACGGAAGAGTTGTTGAACCAAATGGAGGACGAGTTAACTAGAATTCTCAAAACAGGAGACAAGGAGGCCAAGCTGATCCAAGACCAGCCGAATGAACCTGCTACTGATAGAATCTATAAGAAAACGTTTGAACAATTGGAATTTAATGACAGGGTGCACGCGCCACTGCAGCCATCCATGGTGAAGGCCCTCAAATTAGAGCTGAAAGTCCTACCATCACACCTTAAGTATGCTTATCTGGGAGAAGCAAAAACACTGCCAGTCATCATTGCAGCAGGCTTAGCCGAAGAAAAAGAGTGTTGTTTGATAGAAATGTTGAAGAATCACAAGAGGCAATTGTCGCCAGAGCTAGCGAAAGCTCCACCCCAACCCGACCCGTTACCCGAAAACACTGCCCCAGATAGCGAAATCCCTTCCCCACCTAAAAAGAAACCCGTTGCCAAGAGAGGAAGGAAAGCCGCGAAAGGAAAGAAGCAGCCGCCTGTTCAAGTAGAAGAGGAGGAGCAGCTGGTTTTGGGCAGCCAAACCGATGCAGTCGGTCATAATGCTGAGCATGAAGAAGTACAACATGCCGAGACAGAGGTAGAAATAGGTCCAGAACTGTCGCTTGAAGCCAGACGCAGAGTCGAGGATTTTATGCAAAAGCTCTTCCAAGCGGACAGTAGCCATGAGCAAGCGGGCAGTGTTACCACAAGAAAAATGCAGAGAAAGAGGAAGCCCTCCCTAGTTGCAGAGCCTGGCAAATGGAAGAGGCCCAAACAGAAGGTCGACATGCAGGCTAAGAAAAAGGGAAAAGAGAAGGTTGTTGTAGGGCCCTCAAAATTTTTGCGATTTGTCGATTCTGCAGAATCCGAGTGGTTTGAAAGCCTCAAAAAGTGCAATCTGCTAGGAGAAAGGGGCTTTCCATCTGATTCATCCATGCCCCGTTTGTCTCCACCACCATCAACAATCATGAGTGGCAAACCGTTTGCGCACAGCCCAAGCCTACGATCATCCAAATTGTTCAAGAATTCTACGCTAACCTCAACCCTAGTGACTATTCCAATGTGA

Protein sequence

MQEDNVVQQEELQTEKVTESIVENMNTEENVVNDARASVEQTAQPEPVAPQRMVKQPEPEINKTKRAAKTEPVEEVATETPVQKNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTGDKEAKLIQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSMVKALKLELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELAKAPPQPDPLPENTAPDSEIPSPPKKKPVAKRGRKAAKGKKQPPVQVEEEEQLVLGSQTDAVGHNAEHEEVQHAETEVEIGPELSLEARRRVEDFMQKLFQADSSHEQAGSVTTRKMQRKRKPSLVAEPGKWKRPKQKVDMQAKKKGKEKVVVGPSKFLRFVDSAESEWFESLKKCNLLGERGFPSDSSMPRLSPPPSTIMSGKPFAHSPSLRSSKLFKNSTLTSTLVTIPM

Homology

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BLAST of Moc03g01960 vs. NCBI nr
Match: XP_022147186.1 (uncharacterized protein LOC111016198 [Momordica charantia])

HSP 1 Score: 188.0 bits (476), Expect = 1.9e-43
Identity = 97/153 (63.40%), Postives = 124/153 (81.05%), Query Frame = 0


Query: 84  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTGDKEAKL 143
           + VT  +FNSIK+P D+EECSLLR+ADDL+S+E+QTEELL+Q+E+E+T+I +  +KEAKL
Sbjct: 123 QQVTFILFNSIKFPADIEECSLLRLADDLRSEEMQTEELLDQLEEEITKIFEEKEKEAKL 182

Query: 144 IQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSMVKALKLELKVLPSHLKYAYLGEAKT 203
           IQ +PNE ++DR+YKK FE  E  DR  A LQ S+ KA KLELKVLP+HLKYAYLG+A+T
Sbjct: 183 IQGRPNEASSDRVYKKAFESSELKDREQASLQSSVEKASKLELKVLPTHLKYAYLGKAET 242

Query: 204 LPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA 237
           L + IAA LAE+KE  LIEMLKNHKR +   +A
Sbjct: 243 LAINIAADLAEKKEFRLIEMLKNHKRAIDWTIA 275

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BLAST of Moc03g01960 vs. NCBI nr
Match: XP_022156989.1 (uncharacterized protein LOC111023818 [Momordica charantia])

HSP 1 Score: 170.2 bits (430), Expect = 4.1e-38
Identity = 98/153 (64.05%), Postives = 107/153 (69.93%), Query Frame = 0


Query: 84  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTGDKEAKL 143
           + VTLS+FNSIKYP DVEECS LRIADDL SDEIQTEELLNQ+EDELTRI+K        
Sbjct: 220 QQVTLSIFNSIKYPIDVEECSWLRIADDLMSDEIQTEELLNQLEDELTRIIK-------- 279

Query: 144 IQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSMVKALKLELKVLPSHLKYAYLGEAKT 203
                                   DRV APLQPS+VKA KLELKVLPSHLKYAYLGE +T
Sbjct: 280 ------------------------DRVQAPLQPSVVKAPKLELKVLPSHLKYAYLGEVET 339

Query: 204 LPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA 237
           LPV IAA LAEEKEC LIEML+NHK+ +   LA
Sbjct: 340 LPVFIAADLAEEKECRLIEMLRNHKKAIGWTLA 340

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BLAST of Moc03g01960 vs. NCBI nr
Match: XP_030504461.1 (uncharacterized protein LOC115719521 [Cannabis sativa])

HSP 1 Score: 107.5 bits (267), Expect = 3.3e-19
Identity = 64/158 (40.51%), Postives = 101/158 (63.92%), Query Frame = 0


Query: 84  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEI-----QTEELLNQMEDELTRILKTGD 143
           + VT +VFN++++P+++EECS L + D + ++       + E +++ +ED L  +  + D
Sbjct: 132 QKVTFNVFNAMRFPDEIEECSRLSVIDSIVAESFHKKVWKDERVISSLED-LEAL--SED 191

Query: 144 KEAKLIQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSMVKALKLELKVLPSHLKYAYL 203
           +E ++   +P +P     +K+ FE LE  +    PL+PS+ +  KLELK LPSHLKYAYL
Sbjct: 192 EETQVSWVEPMQPFPK--FKRAFESLELKESNFKPLKPSIQEPPKLELKPLPSHLKYAYL 251

Query: 204 GEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA 237
           GE +TLPVII+A L  E E  L+E+LK HKR +   +A
Sbjct: 252 GENETLPVIISAWLEAETEGLLLEVLKKHKRAIGWTMA 284

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BLAST of Moc03g01960 vs. NCBI nr
Match: XP_030502183.1 (uncharacterized protein LOC115717351 [Cannabis sativa])

HSP 1 Score: 102.8 bits (255), Expect = 8.0e-18
Identity = 66/167 (39.52%), Postives = 97/167 (58.08%), Query Frame = 0


Query: 74  EEVATETPVQKNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTE----ELLNQMEDE 133
           EE+      QK VT +VFN++++P+++EECS + + D + +++   E    E      DE
Sbjct: 256 EELTMRVNDQK-VTFNVFNAMRFPDEIEECSRISVIDSIVAEKFHKEACKDEKFISSFDE 315

Query: 134 LTRILKTGDKEAKLIQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSMVKALKLELKVL 193
           L  + +  D +   +  +P +P     +KK FE LE  +    P +PS  +  KLELK L
Sbjct: 316 LEDLSEDEDNQVAWV--EPLQPMPK--FKKPFESLELKESNFKPPKPSTQEPPKLELKPL 375

Query: 194 PSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA 237
           PSHLKYAYLGE  TLPVIIA+ L  E E  L+E+LK HK+ +   +A
Sbjct: 376 PSHLKYAYLGENDTLPVIIASNLVVEDEGALLEVLKKHKKAIGWTMA 417

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BLAST of Moc03g01960 vs. NCBI nr
Match: XP_030485610.1 (uncharacterized protein LOC115702304 [Cannabis sativa])

HSP 1 Score: 100.1 bits (248), Expect = 5.2e-17
Identity = 60/158 (37.97%), Postives = 100/158 (63.29%), Query Frame = 0


Query: 84  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEI-----QTEELLNQMEDELTRILKTGD 143
           + VT +VFN++++ +++EECS L + D + ++       + E +++ +ED L  +  + D
Sbjct: 164 QKVTFNVFNAMRFQDEIEECSRLSVIDSIVAESFHKKVWKDERVISSLED-LEAL--SED 223

Query: 144 KEAKLIQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSMVKALKLELKVLPSHLKYAYL 203
           +E ++   +P +P+    +K++FE LE  +    P +PS+ +  KLELK LPSHLKYAYL
Sbjct: 224 EETQVAWVEPMQPSPK--FKRSFESLELKESNFKPPKPSIQEPPKLELKPLPSHLKYAYL 283

Query: 204 GEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA 237
           GE + LP+II+A L  E E  L+E+LK HKR +   +A
Sbjct: 284 GENEMLPIIISACLEAEVEGLLLEVLKKHKRAIGWTMA 316

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BLAST of Moc03g01960 vs. ExPASy TrEMBL
Match: A0A6J1D1L0 (uncharacterized protein LOC111016198 OS=Momordica charantia OX=3673 GN=LOC111016198 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 9.2e-44
Identity = 97/153 (63.40%), Postives = 124/153 (81.05%), Query Frame = 0


Query: 84  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTGDKEAKL 143
           + VT  +FNSIK+P D+EECSLLR+ADDL+S+E+QTEELL+Q+E+E+T+I +  +KEAKL
Sbjct: 123 QQVTFILFNSIKFPADIEECSLLRLADDLRSEEMQTEELLDQLEEEITKIFEEKEKEAKL 182

Query: 144 IQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSMVKALKLELKVLPSHLKYAYLGEAKT 203
           IQ +PNE ++DR+YKK FE  E  DR  A LQ S+ KA KLELKVLP+HLKYAYLG+A+T
Sbjct: 183 IQGRPNEASSDRVYKKAFESSELKDREQASLQSSVEKASKLELKVLPTHLKYAYLGKAET 242

Query: 204 LPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA 237
           L + IAA LAE+KE  LIEMLKNHKR +   +A
Sbjct: 243 LAINIAADLAEKKEFRLIEMLKNHKRAIDWTIA 275

[Close]

BLAST of Moc03g01960 vs. ExPASy TrEMBL
Match: A0A6J1DV77 (uncharacterized protein LOC111023818 OS=Momordica charantia OX=3673 GN=LOC111023818 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.0e-38
Identity = 98/153 (64.05%), Postives = 107/153 (69.93%), Query Frame = 0


Query: 84  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTGDKEAKL 143
           + VTLS+FNSIKYP DVEECS LRIADDL SDEIQTEELLNQ+EDELTRI+K        
Sbjct: 220 QQVTLSIFNSIKYPIDVEECSWLRIADDLMSDEIQTEELLNQLEDELTRIIK-------- 279

Query: 144 IQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSMVKALKLELKVLPSHLKYAYLGEAKT 203
                                   DRV APLQPS+VKA KLELKVLPSHLKYAYLGE +T
Sbjct: 280 ------------------------DRVQAPLQPSVVKAPKLELKVLPSHLKYAYLGEVET 339

Query: 204 LPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA 237
           LPV IAA LAEEKEC LIEML+NHK+ +   LA
Sbjct: 340 LPVFIAADLAEEKECRLIEMLRNHKKAIGWTLA 340

[Close]

BLAST of Moc03g01960 vs. ExPASy TrEMBL
Match: A0A2G9I815 (DNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01367 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.1e-12
Identity = 57/156 (36.54%), Postives = 91/156 (58.33%), Query Frame = 0


Query: 84  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTGDKEAKL 143
           + +T +VF +IK+PN+ +EC  + + D+L  +E   E+ L+ +E  L  +L   +KE   
Sbjct: 400 QQITFNVFKAIKFPNESDECFAVSLYDNLAGNESIAEQPLDPLERALLDLLNEKNKE--- 459

Query: 144 IQDQPNEPATDRIYKKTFEQLEFNDRVHAP---LQPSMVKALKLELKVLPSHLKYAYLGE 203
             D+      D      +  +E  +R  AP   L+PS+ +   LELK LPSHL YAYLGE
Sbjct: 460 --DREVVKTLDASKYFKYRGVESLNRA-APSKVLKPSIEEHPTLELKPLPSHLCYAYLGE 519

Query: 204 AKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA 237
           + TLPVII++ L++ +   L+ +L+NHKR +   +A
Sbjct: 520 SDTLPVIISSSLSDLQVEKLLRVLRNHKRAIGWTIA 549

[Close]

BLAST of Moc03g01960 vs. ExPASy TrEMBL
Match: A0A4Y1QSK5 (Reverse transcriptase OS=Prunus dulcis OX=3755 GN=Prudu_003167 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-11
Identity = 47/145 (32.41%), Postives = 77/145 (53.10%), Query Frame = 0


Query: 84  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTGDKEAKL 143
           +  T  VF +IK+P + E+C  + + D++ SD  + E   + +E  L     + D    +
Sbjct: 266 EKATFKVFEAIKFPREAEDCFRMELVDEIASDTFEKENPRHPLESTLVHAATSQDDNPMV 325

Query: 144 IQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSMVKALKLELKVLPSHLKYAYLGEAKT 203
            +      A+   + +   Q E          PS++ A  L LK LP+HL+YAYLG ++T
Sbjct: 326 AEYALYLDASQPYHPRRRNQFEPLGAAPPTAAPSVIAAPTLTLKPLPTHLRYAYLGTSET 385

Query: 204 LPVIIAAGLAEEKECCLIEMLKNHK 229
           LPVIIAA L+E +E  ++ +L+ HK
Sbjct: 386 LPVIIAANLSETEEEKVLRVLRKHK 410

[Close]

BLAST of Moc03g01960 vs. ExPASy TrEMBL
Match: A0A6N2NBX1 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS482486 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.6e-11
Identity = 55/159 (34.59%), Postives = 87/159 (54.72%), Query Frame = 0


Query: 86  VTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTG--DKEAKL 145
           VT ++F+++KYP++ E    + + D +  D+ +    LN M+D+L  +L+    DK+A+ 
Sbjct: 616 VTFNIFDAMKYPDEFESVFHIDVIDPIVQDDFE----LNLMKDKLNLVLQQSKTDKDARR 675

Query: 146 IQDQPNEPATDRIYKKTFEQLEFND------RVHAPLQPSMVKALKLELKVLPSHLKYAY 205
             D+  + A   ++        +          H    PS+V+  KLELK+LP+HLKY Y
Sbjct: 676 EIDEDMKEAIMSLHSLPIMPNMWTSLPVELPSSHVKDLPSIVQPPKLELKMLPTHLKYVY 735

Query: 206 LGEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA 237
           LGE +TLPVIIA  L E  E  L+ +L+ HK  +   LA
Sbjct: 736 LGEDETLPVIIANDLTEVHEEKLLRVLREHKTAIGWTLA 770

The following BLAST results are available for this feature:

BLAST of Moc03g01960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147186.1	1.9e-43	63.40	uncharacterized protein LOC111016198 [Momordica charantia]	[more]
XP_022156989.1	4.1e-38	64.05	uncharacterized protein LOC111023818 [Momordica charantia]	[more]
XP_030504461.1	3.3e-19	40.51	uncharacterized protein LOC115719521 [Cannabis sativa]	[more]
XP_030502183.1	8.0e-18	39.52	uncharacterized protein LOC115717351 [Cannabis sativa]	[more]
XP_030485610.1	5.2e-17	37.97	uncharacterized protein LOC115702304 [Cannabis sativa]	[more]

BLAST of Moc03g01960 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc03g01960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D1L0	9.2e-44	63.40	uncharacterized protein LOC111016198 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1DV77	2.0e-38	64.05	uncharacterized protein LOC111023818 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A2G9I815	7.1e-12	36.54	DNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_013...	[more]
A0A4Y1QSK5	1.2e-11	32.41	Reverse transcriptase OS=Prunus dulcis OX=3755 GN=Prudu_003167 PE=4 SV=1	[more]
A0A6N2NBX1	4.6e-11	34.59	Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS482486 PE=4 SV=...	[more]

BLAST of Moc03g01960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 109..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 419..443
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 336..382
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 356..382
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..77
None	No IPR available	PANTHER	PTHR24559:SF373	REVERSE TRANSCRIPTASE DOMAIN, RIBONUCLEASE H-LIKE DOMAIN PROTEIN-RELATED	coord: 156..229
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 156..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g01960.1	Moc03g01960.1	mRNA